BLASTX nr result

ID: Stemona21_contig00042956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00042956
         (323 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    75   9e-12
emb|CBI29360.3| unnamed protein product [Vitis vinifera]               75   9e-12
gb|EMJ02395.1| hypothetical protein PRUPE_ppa002584mg [Prunus pe...    69   9e-10
ref|XP_004292506.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    64   2e-08
ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 3-l...    63   5e-08
ref|XP_004496416.1| PREDICTED: polyadenylate-binding protein 3-l...    58   2e-06
ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-l...    57   2e-06
ref|XP_004496415.1| PREDICTED: polyadenylate-binding protein 3-l...    57   3e-06
ref|XP_002307526.2| hypothetical protein POPTR_0005s22040g [Popu...    56   4e-06
ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-l...    56   4e-06
ref|XP_006842170.1| hypothetical protein AMTR_s00078p00149860 [A...    55   8e-06

>ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
            [Vitis vinifera]
          Length = 1093

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
 Frame = -2

Query: 322  GMRSGVAPNYVMPYHLQRQGQPWHRVG---GHDXXXXXXXXXXXXXXXXXXXXRYPPNGR 152
            GMR GVAPN++MPY LQRQGQP  R+G   G +                    RY  NGR
Sbjct: 902  GMRPGVAPNFIMPYQLQRQGQPGQRMGVRRGGNSQQMQHQQQPLLHRNSNQSYRYMANGR 961

Query: 151  NGVDXXXXXXXXXXXXXXXXLDVSGMQVASMDAAQSPAMPTATLASALA 5
            NGVD                 DVSGM V+ MD  ++  +P +TLASALA
Sbjct: 962  NGVDPSMVPQGLMGPVMPLPFDVSGMPVSPMDIQRTGPVPMSTLASALA 1010


>emb|CBI29360.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
 Frame = -2

Query: 322 GMRSGVAPNYVMPYHLQRQGQPWHRVG---GHDXXXXXXXXXXXXXXXXXXXXRYPPNGR 152
           GMR GVAPN++MPY LQRQGQP  R+G   G +                    RY  NGR
Sbjct: 442 GMRPGVAPNFIMPYQLQRQGQPGQRMGVRRGGNSQQMQHQQQPLLHRNSNQSYRYMANGR 501

Query: 151 NGVDXXXXXXXXXXXXXXXXLDVSGMQVASMDAAQSPAMPTATLASALA 5
           NGVD                 DVSGM V+ MD  ++  +P +TLASALA
Sbjct: 502 NGVDPSMVPQGLMGPVMPLPFDVSGMPVSPMDIQRTGPVPMSTLASALA 550


>gb|EMJ02395.1| hypothetical protein PRUPE_ppa002584mg [Prunus persica]
          Length = 655

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 44/109 (40%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
 Frame = -2

Query: 322 GMRSGVAPNYVMPYHLQRQGQPWHRVG---GHDXXXXXXXXXXXXXXXXXXXXRYPPNGR 152
           GMR GVAPN++MPYHLQRQGQ   R+G   G +                    RY  N R
Sbjct: 464 GMRPGVAPNFIMPYHLQRQGQHGQRMGVRRGGNFQQVQQQQQQLLHRNSNQGLRYMGNAR 523

Query: 151 NGVDXXXXXXXXXXXXXXXXLDVSGMQVASMDAAQSPAMPTATLASALA 5
           NGVD                 D SGM V   D+ +S  +P +TLASALA
Sbjct: 524 NGVDPSVTPQGIVGPIMPLPFDGSGMPVTPNDSQRSGPLPMSTLASALA 572


>ref|XP_004292506.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
           5-like [Fragaria vesca subsp. vesca]
          Length = 635

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 44/109 (40%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
 Frame = -2

Query: 322 GMRSGVAPNYVMPYHLQRQGQPWHRVGGH--DXXXXXXXXXXXXXXXXXXXXRYPPNGRN 149
           GMR GVAPN++MPYHLQRQGQP  R+G                         RY  + RN
Sbjct: 445 GMRPGVAPNFIMPYHLQRQGQPGQRIGVRRGGNFQQVQQQQQLMHRNSNQGSRYIGHARN 504

Query: 148 GVDXXXXXXXXXXXXXXXXLDVSGM-QVASMDAAQSPAMPTATLASALA 5
           GVD                 D SGM  V S D  ++  MP +TLASALA
Sbjct: 505 GVDSAVSPQGLVSPVMPLPFDGSGMPAVTSSDIQRTGPMPMSTLASALA 553


>ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 3-like isoform 1 [Glycine
           max]
          Length = 652

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 43/107 (40%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
 Frame = -2

Query: 322 GMRSGVAPNYVMPYHLQRQGQPWHRVG-GHDXXXXXXXXXXXXXXXXXXXXRYPPNGRNG 146
           GMR GVAPN++MPYHLQRQGQ   R G   +                    RY PNGRNG
Sbjct: 464 GMRPGVAPNFIMPYHLQRQGQLGQRTGVRRNGNFQQVQQNQMLHRNSNQGFRYMPNGRNG 523

Query: 145 VDXXXXXXXXXXXXXXXXLDVSGMQVASMDAAQSPAMPTATLASALA 5
           +D                 D SG+  A  D  Q P   + TLASALA
Sbjct: 524 MDPSLVPHGLMGPMMPMPFDGSGVTAAPND-NQRPGALSTTLASALA 569


>ref|XP_004496416.1| PREDICTED: polyadenylate-binding protein 3-like isoform X2 [Cicer
           arietinum]
          Length = 647

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 42/107 (39%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
 Frame = -2

Query: 322 GMRSGVAPNYVMPYHLQRQGQPWHRVG-GHDXXXXXXXXXXXXXXXXXXXXRYPPNGRNG 146
           GMR GVAPN+VMPY LQRQGQP  R+G   +                    RY  N RNG
Sbjct: 460 GMRPGVAPNFVMPYQLQRQGQPGQRMGVRRNGNLQHVQPNQMAHRNSNQGFRYMANNRNG 519

Query: 145 VDXXXXXXXXXXXXXXXXLDVSGMQVASMDAAQSPAMPTATLASALA 5
           +D                 D SG+  A +D +Q P   + TLASALA
Sbjct: 520 MDPSGVPQGLVGQMLPMNYDGSGVTAAPID-SQRPG--STTLASALA 563


>ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
          Length = 652

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
 Frame = -2

Query: 322 GMRSGVAPNYVMPYHLQRQGQPWHRVG-GHDXXXXXXXXXXXXXXXXXXXXRYPPNGRNG 146
           GMR G+ PN++MPY  QRQGQP  R+G                        RY  N RNG
Sbjct: 463 GMRPGMGPNFLMPYQFQRQGQPGPRLGVRRGGNSQPLPQQQLPLRGYGQSFRYMNNARNG 522

Query: 145 VDXXXXXXXXXXXXXXXXLDVSGMQVASMDAAQSPAMPTATLASALA 5
           ++                 D SG+     D  +S A+PT+TLASALA
Sbjct: 523 LETPVLPQGLVSPMMPLAFDGSGVSSPPNDIQRSRAVPTSTLASALA 569


>ref|XP_004496415.1| PREDICTED: polyadenylate-binding protein 3-like isoform X1 [Cicer
           arietinum]
          Length = 648

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/108 (38%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
 Frame = -2

Query: 322 GMRSGVAPNYVMPYHLQRQGQPWHRVG--GHDXXXXXXXXXXXXXXXXXXXXRYPPNGRN 149
           GMR GVAPN+VMPY LQRQGQP  R+G   +                     RY  N RN
Sbjct: 460 GMRPGVAPNFVMPYQLQRQGQPGQRMGVRRNGNLQHVQPNQQMAHRNSNQGFRYMANNRN 519

Query: 148 GVDXXXXXXXXXXXXXXXXLDVSGMQVASMDAAQSPAMPTATLASALA 5
           G+D                 D SG+  A +D +Q P   + TLASALA
Sbjct: 520 GMDPSGVPQGLVGQMLPMNYDGSGVTAAPID-SQRPG--STTLASALA 564


>ref|XP_002307526.2| hypothetical protein POPTR_0005s22040g [Populus trichocarpa]
           gi|550339506|gb|EEE94522.2| hypothetical protein
           POPTR_0005s22040g [Populus trichocarpa]
          Length = 649

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/108 (33%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
 Frame = -2

Query: 322 GMRSGVAPNYVMPYHLQRQGQPWHRVGGH--DXXXXXXXXXXXXXXXXXXXXRYPPNGRN 149
           GMR+GV PN+VMPY +QRQGQ   R+G                         RY  N RN
Sbjct: 460 GMRAGVGPNFVMPYQMQRQGQQGQRMGIRRGGNHQQIQQQQQLLHRNTNQGLRYMGNARN 519

Query: 148 GVDXXXXXXXXXXXXXXXXLDVSGMQVASMDAAQSPAMPTATLASALA 5
           G+D                 + SGM V   DA ++  +P + L +ALA
Sbjct: 520 GIDSSAAPQGFVGPVVPFPFEASGMPVTPSDAQRTAPVPISALTTALA 567


>ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
          Length = 652

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/107 (35%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
 Frame = -2

Query: 322 GMRSGVAPNYVMPYHLQRQGQPWHRVG-GHDXXXXXXXXXXXXXXXXXXXXRYPPNGRNG 146
           GMR G+ PN++MPY  QRQGQP  R G                        RY  N RNG
Sbjct: 463 GMRPGMGPNFLMPYQFQRQGQPGPRSGVRRGGNSQPLPQQQLPLRGYGQSFRYMNNARNG 522

Query: 145 VDXXXXXXXXXXXXXXXXLDVSGMQVASMDAAQSPAMPTATLASALA 5
           ++                 D SG+     D  +S A+PT+TLASALA
Sbjct: 523 LESPVLPQGLVSPMMPLAFDGSGVSSPPNDIQRSRAVPTSTLASALA 569


>ref|XP_006842170.1| hypothetical protein AMTR_s00078p00149860 [Amborella trichopoda]
           gi|548844219|gb|ERN03845.1| hypothetical protein
           AMTR_s00078p00149860 [Amborella trichopoda]
          Length = 645

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 41/113 (36%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
 Frame = -2

Query: 322 GMRSGVA--PNYVMPYHLQRQGQPWHRVG-----GHDXXXXXXXXXXXXXXXXXXXXRYP 164
           GMR GVA  PN+V+PY +QRQGQP  R+G                            RY 
Sbjct: 448 GMRPGVAQMPNFVVPYPVQRQGQPGQRMGVRRGGAPHQLQQQQQQQQMIQRNANQGFRYM 507

Query: 163 PNGRNGVDXXXXXXXXXXXXXXXXLDVSGMQVASMDAAQSPAMPTATLASALA 5
            N RNG+D                LDV GM ++ M+A +   +P  TLASALA
Sbjct: 508 NNARNGLDPTMVPQGLMSPMLPLPLDVPGMVMSPMEAPRPQPVPIGTLASALA 560


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