BLASTX nr result
ID: Stemona21_contig00042876
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00042876
(490 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citr... 114 1e-23
ref|XP_002314110.1| pentatricopeptide repeat-containing family p... 112 7e-23
ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containi... 109 3e-22
gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus pe... 109 3e-22
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi... 109 3e-22
ref|XP_002320601.2| pentatricopeptide repeat-containing family p... 109 4e-22
ref|XP_006382364.1| hypothetical protein POPTR_0005s01450g, part... 108 6e-22
emb|CBI15973.3| unnamed protein product [Vitis vinifera] 108 6e-22
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi... 108 6e-22
ref|XP_002330073.1| predicted protein [Populus trichocarpa] 108 6e-22
ref|XP_006395137.1| hypothetical protein EUTSA_v10003805mg [Eutr... 108 7e-22
emb|CBI29241.3| unnamed protein product [Vitis vinifera] 108 7e-22
ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containi... 108 7e-22
ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containi... 108 1e-21
emb|CBI28813.3| unnamed protein product [Vitis vinifera] 107 2e-21
ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
ref|XP_006281977.1| hypothetical protein CARUB_v10028201mg [Caps... 107 2e-21
ref|NP_199702.1| protein LOW PSII ACCUMULATION 66 [Arabidopsis t... 107 2e-21
ref|XP_002865693.1| pentatricopeptide repeat-containing protein ... 107 2e-21
>ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Citrus sinensis]
Length = 746
Score = 114 bits (286), Expect = 1e-23
Identities = 51/65 (78%), Positives = 54/65 (83%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
LAIA+GLIS EP PIRI KNLR+C DCHS AKLIS+LYNR I LRDRYRFHHF G CS
Sbjct: 682 LAIAYGLISVEPSQPIRIVKNLRVCGDCHSVAKLISKLYNREILLRDRYRFHHFSGGNCS 741
Query: 308 CMDYW 294
CMDYW
Sbjct: 742 CMDYW 746
>ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citrus clementina]
gi|557530863|gb|ESR42046.1| hypothetical protein
CICLE_v10011151mg [Citrus clementina]
Length = 737
Score = 114 bits (286), Expect = 1e-23
Identities = 51/65 (78%), Positives = 54/65 (83%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
LAIA+GLIS EP PIRI KNLR+C DCHS AKLIS+LYNR I LRDRYRFHHF G CS
Sbjct: 673 LAIAYGLISVEPSQPIRIVKNLRVCGDCHSVAKLISKLYNREILLRDRYRFHHFSGGNCS 732
Query: 308 CMDYW 294
CMDYW
Sbjct: 733 CMDYW 737
>ref|XP_002314110.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222850518|gb|EEE88065.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 738
Score = 112 bits (279), Expect = 7e-23
Identities = 50/65 (76%), Positives = 53/65 (81%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
LAIA+GLI EP PIRI KNLR+C DCHS AKLIS+LYNR I LRDRYRFHHF G CS
Sbjct: 674 LAIAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCS 733
Query: 308 CMDYW 294
CMDYW
Sbjct: 734 CMDYW 738
>ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum tuberosum]
Length = 744
Score = 109 bits (273), Expect = 3e-22
Identities = 46/65 (70%), Positives = 54/65 (83%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
LA+AFGLIS P PIR+ KNLR+C DCH+ AKL+S+LYNR I LRDRYRFHHF++G CS
Sbjct: 680 LAMAFGLISVAPSQPIRVVKNLRVCADCHAVAKLLSKLYNREIILRDRYRFHHFKEGNCS 739
Query: 308 CMDYW 294
C DYW
Sbjct: 740 CKDYW 744
>gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
Length = 738
Score = 109 bits (273), Expect = 3e-22
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
LAIAFGLIS P PI++ KNLR+C DCHS AKLIS+LY+R I LRDRYRFHHF DG CS
Sbjct: 674 LAIAFGLISLSPSQPIQVVKNLRVCGDCHSVAKLISKLYDREILLRDRYRFHHFRDGHCS 733
Query: 308 CMDYW 294
C DYW
Sbjct: 734 CNDYW 738
>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 109 bits (273), Expect = 3e-22
Identities = 47/65 (72%), Positives = 54/65 (83%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
LAIAFGL++ P PIR+ KNLRIC DCH+ AKL+SR+Y+R I LRDRYRFHHF DG CS
Sbjct: 669 LAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCS 728
Query: 308 CMDYW 294
CMDYW
Sbjct: 729 CMDYW 733
>ref|XP_002320601.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550324522|gb|EEE98916.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 629
Score = 109 bits (272), Expect = 4e-22
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
+AIAFGLIS P P++I KNLR+CEDCHS+ KL+S++YNR I +RDR RFHHFE+G CS
Sbjct: 565 IAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRKIIVRDRKRFHHFENGSCS 624
Query: 308 CMDYW 294
CMDYW
Sbjct: 625 CMDYW 629
>ref|XP_006382364.1| hypothetical protein POPTR_0005s01450g, partial [Populus
trichocarpa] gi|550337723|gb|ERP60161.1| hypothetical
protein POPTR_0005s01450g, partial [Populus trichocarpa]
Length = 788
Score = 108 bits (271), Expect = 6e-22
Identities = 47/65 (72%), Positives = 55/65 (84%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
LAIAFGLI+ +P PIRI KNLRIC DCH+AAKLIS+ +NR I +RDR+RFHHF+ G CS
Sbjct: 724 LAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCS 783
Query: 308 CMDYW 294
CMDYW
Sbjct: 784 CMDYW 788
>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 108 bits (271), Expect = 6e-22
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
LAIAFGLIS PIRI KNLR+C DCHS AKL+S+LY+R I LRDRYRFHHF +G CS
Sbjct: 588 LAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCS 647
Query: 308 CMDYW 294
CMDYW
Sbjct: 648 CMDYW 652
>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 108 bits (271), Expect = 6e-22
Identities = 48/65 (73%), Positives = 53/65 (81%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
LAIAFGLIS PIRI KNLR+C DCHS AKL+S+LY+R I LRDRYRFHHF +G CS
Sbjct: 679 LAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCS 738
Query: 308 CMDYW 294
CMDYW
Sbjct: 739 CMDYW 743
>ref|XP_002330073.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 108 bits (271), Expect = 6e-22
Identities = 47/65 (72%), Positives = 55/65 (84%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
LAIAFGLI+ +P PIRI KNLRIC DCH+AAKLIS+ +NR I +RDR+RFHHF+ G CS
Sbjct: 729 LAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCS 788
Query: 308 CMDYW 294
CMDYW
Sbjct: 789 CMDYW 793
>ref|XP_006395137.1| hypothetical protein EUTSA_v10003805mg [Eutrema salsugineum]
gi|557091776|gb|ESQ32423.1| hypothetical protein
EUTSA_v10003805mg [Eutrema salsugineum]
Length = 645
Score = 108 bits (270), Expect = 7e-22
Identities = 47/65 (72%), Positives = 54/65 (83%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
+A+AFGLIS P PIRI KNLRICEDCHS+ KLIS++Y R I +RDR RFHHF+DG CS
Sbjct: 581 IAVAFGLISTSPAKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCS 640
Query: 308 CMDYW 294
CMDYW
Sbjct: 641 CMDYW 645
>emb|CBI29241.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 108 bits (270), Expect = 7e-22
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
+AIAFGLIS +P P+RI+KNLRICEDCHS+ KLIS++Y R I +RDR RFHHF +G CS
Sbjct: 450 IAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRFHHFVNGSCS 509
Query: 308 CMDYW 294
CMDYW
Sbjct: 510 CMDYW 514
>ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 108 bits (270), Expect = 7e-22
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
+AIAFGLIS +P P+RI+KNLRICEDCHS+ KLIS++Y R I +RDR RFHHF +G CS
Sbjct: 567 IAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRFHHFVNGSCS 626
Query: 308 CMDYW 294
CMDYW
Sbjct: 627 CMDYW 631
>ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum lycopersicum]
Length = 744
Score = 108 bits (269), Expect = 1e-21
Identities = 46/65 (70%), Positives = 54/65 (83%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
LA+AFGLIS P PIRI KNLR+C DCH+ AKL+S+LY+R I LRDRYRFHHF++G CS
Sbjct: 680 LAMAFGLISVAPSQPIRIVKNLRVCADCHAVAKLLSKLYDREIILRDRYRFHHFKEGNCS 739
Query: 308 CMDYW 294
C DYW
Sbjct: 740 CKDYW 744
>emb|CBI28813.3| unnamed protein product [Vitis vinifera]
Length = 500
Score = 107 bits (267), Expect = 2e-21
Identities = 46/65 (70%), Positives = 53/65 (81%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
LAIAFGLI +P IRI+KNLR+C DCHSA KLIS++YNR I +RDR RFHHF DG CS
Sbjct: 436 LAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCS 495
Query: 308 CMDYW 294
CMD+W
Sbjct: 496 CMDFW 500
>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 107 bits (267), Expect = 2e-21
Identities = 46/65 (70%), Positives = 53/65 (81%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
LAIAFGLI +P IRI+KNLR+C DCHSA KLIS++YNR I +RDR RFHHF DG CS
Sbjct: 576 LAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCS 635
Query: 308 CMDYW 294
CMD+W
Sbjct: 636 CMDFW 640
>ref|XP_006281977.1| hypothetical protein CARUB_v10028201mg [Capsella rubella]
gi|482550681|gb|EOA14875.1| hypothetical protein
CARUB_v10028201mg [Capsella rubella]
Length = 646
Score = 107 bits (266), Expect = 2e-21
Identities = 47/65 (72%), Positives = 53/65 (81%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
+A AFGLIS P PIRI KNLRICEDCHS+ KLIS++Y R I +RDR RFHHF+DG CS
Sbjct: 582 IATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCS 641
Query: 308 CMDYW 294
CMDYW
Sbjct: 642 CMDYW 646
>ref|NP_199702.1| protein LOW PSII ACCUMULATION 66 [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g48910 gi|10177180|dbj|BAB10314.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding
protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| protein LOW PSII
ACCUMULATION 66 [Arabidopsis thaliana]
Length = 646
Score = 107 bits (266), Expect = 2e-21
Identities = 47/65 (72%), Positives = 53/65 (81%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
+A AFGLIS P PIRI KNLRICEDCHS+ KLIS++Y R I +RDR RFHHF+DG CS
Sbjct: 582 IATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCS 641
Query: 308 CMDYW 294
CMDYW
Sbjct: 642 CMDYW 646
>ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297311528|gb|EFH41952.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 640
Score = 107 bits (266), Expect = 2e-21
Identities = 47/65 (72%), Positives = 53/65 (81%)
Frame = -3
Query: 488 LAIAFGLISAEPHAPIRISKNLRICEDCHSAAKLISRLYNRHIYLRDRYRFHHFEDGQCS 309
+A AFGLIS P PIRI KNLRICEDCHS+ KLIS++Y R I +RDR RFHHF+DG CS
Sbjct: 576 MATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCS 635
Query: 308 CMDYW 294
CMDYW
Sbjct: 636 CMDYW 640