BLASTX nr result
ID: Stemona21_contig00042469
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00042469
(1260 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT03268.1| hypothetical protein F775_20964 [Aegilops tauschii] 59 2e-18
ref|XP_002320961.2| hypothetical protein POPTR_0014s11290g [Popu... 69 1e-17
ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [S... 52 3e-16
ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [S... 52 3e-16
ref|XP_006373668.1| hypothetical protein POPTR_0016s02630g [Popu... 52 8e-16
gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japo... 59 1e-14
gb|AAM92824.1| putative chloroplast RNA processing protein [Oryz... 59 2e-14
ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group] g... 59 2e-14
ref|XP_006302023.1| hypothetical protein CARUB_v10020005mg [Caps... 54 3e-14
dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana] 55 4e-14
ref|NP_188886.1| pentatricopeptide repeat-containing protein [Ar... 55 4e-14
ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. l... 63 5e-14
gb|EMJ09871.1| hypothetical protein PRUPE_ppa023798mg [Prunus pe... 53 8e-14
ref|XP_006302102.1| hypothetical protein CARUB_v10020093mg [Caps... 62 1e-13
gb|EMS62736.1| Protein Rf1, mitochondrial [Triticum urartu] 63 1e-13
gb|EMT02311.1| hypothetical protein F775_12462 [Aegilops tauschii] 50 2e-13
gb|EMJ05176.1| hypothetical protein PRUPE_ppa025246mg, partial [... 59 4e-13
ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [... 58 4e-13
gb|EMJ19030.1| hypothetical protein PRUPE_ppa025996mg, partial [... 52 5e-13
gb|EMT32271.1| hypothetical protein F775_20357 [Aegilops tauschii] 57 5e-13
>gb|EMT03268.1| hypothetical protein F775_20964 [Aegilops tauschii]
Length = 623
Score = 58.5 bits (140), Expect(3) = 2e-18
Identities = 28/65 (43%), Positives = 39/65 (60%)
Frame = -3
Query: 712 DIEI*NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGALKFI 533
D+ + N+ DGYCL+G+++EA ++ D M S G PD F Y L+NGYCK RI L
Sbjct: 343 DVIMYNSLMDGYCLVGKVEEALRVLDAMKSAGLQPDAFTYGILLNGYCKIGRIAAGLSLF 402
Query: 532 FSDAL 518
+L
Sbjct: 403 MEMSL 407
Score = 45.8 bits (107), Expect(3) = 2e-18
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Frame = -2
Query: 374 HMMLDALCKSQEID*ALKVSEDNNYSQIWMYCYLGLVTFK*M--AC*KLAELELRRNLIG 201
+++L+ LCK+ D A+++ + + + + ++TF M A K +E ++L
Sbjct: 453 NIVLNGLCKNNCTDEAIELFKKLRATNV----KIDVITFSTMISAMFKTRRIEEAKDLFA 508
Query: 200 -----G*RQKATAFTLM--GLVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVRSLPDKG 42
G ++LM +KEG L + D++F M +AGC+P S +LN +VR G
Sbjct: 509 TISAIGLVPSVVTYSLMMTNFIKEGLLADADDMFLAMEKAGCAPDSRLLNQVVRVFLKNG 568
Query: 41 D 39
+
Sbjct: 569 E 569
Score = 36.2 bits (82), Expect(3) = 2e-18
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = -1
Query: 540 SLFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
SLF +M VKPT + Y+ L G L+R G+ +A++ R M G+ I TY
Sbjct: 400 SLFMEMSLSRVKPTTIMYNIILDG-LFRSGRTVSAKEKFRTMSESGIPVGIDTY 452
>ref|XP_002320961.2| hypothetical protein POPTR_0014s11290g [Populus trichocarpa]
gi|550323979|gb|EEE99276.2| hypothetical protein
POPTR_0014s11290g [Populus trichocarpa]
Length = 453
Score = 69.3 bits (168), Expect(3) = 1e-17
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = -3
Query: 697 NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGALKFI 533
+T DGYCL G+MDEA + D+MVS+GC P+ + YTSL+NGYCK RI A++ +
Sbjct: 185 STLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLL 239
Score = 36.6 bits (83), Expect(3) = 1e-17
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = -1
Query: 516 KGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
KG+ P VT++T +SG L R G+ AA+Q+ R + A G P+I TY
Sbjct: 245 KGLVPDIVTFTTIISG-LCRAGRPLAAQQLFRYICAHGHTPNIMTY 289
Score = 31.6 bits (70), Expect(3) = 1e-17
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Frame = -2
Query: 371 MMLDALCKSQEID*ALKVSEDNNYSQIWMYCYLGLVTFK*MA-C*KLAE-LELRRNLIG- 201
++LD LCK ++ A + ++ S + + + + C K+ + EL LI
Sbjct: 291 VLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDE 350
Query: 200 G*RQKATAFTLM--GLVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVR 60
G + +T + L KEG + E LF M GC+P N I++
Sbjct: 351 GLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQ 399
>ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein
SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 52.4 bits (124), Expect(3) = 3e-16
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = -3
Query: 682 GYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGA 545
GYCL GR DEA K+ D MVS G P Y +L++GYC + RI+ A
Sbjct: 523 GYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 568
Score = 47.8 bits (112), Expect(3) = 3e-16
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Frame = -2
Query: 374 HMMLDALCKSQEID*ALKVSEDNNYSQIWMYCYLGLVTFK*M--AC*KLAELELRRNLIG 201
+++L+ LCKS +D A K+ + S L ++TF M A K E +L
Sbjct: 623 NIILNGLCKSNCVDEAFKMFQ----SLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 678
Query: 200 -----G*RQKATAFTLMG--LVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVRSLPDKG 42
G + L+ L++EG L+E D+LF M + G +P+S MLNA+VR L +G
Sbjct: 679 AIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 738
Query: 41 D 39
D
Sbjct: 739 D 739
Score = 32.7 bits (73), Expect(3) = 3e-16
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = -1
Query: 537 LFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
LF +M KGV P VTY+T L G L++ + A+++ M G DI+TY
Sbjct: 571 LFREMLRKGVTPGVVTYNTILHG-LFQTKRFSEAKELYLNMINSGTKCDIYTY 622
>ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein
SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 52.4 bits (124), Expect(3) = 3e-16
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = -3
Query: 682 GYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGA 545
GYCL GR DEA K+ D MVS G P Y +L++GYC + RI+ A
Sbjct: 458 GYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 503
Score = 47.8 bits (112), Expect(3) = 3e-16
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Frame = -2
Query: 374 HMMLDALCKSQEID*ALKVSEDNNYSQIWMYCYLGLVTFK*M--AC*KLAELELRRNLIG 201
+++L+ LCKS +D A K+ + S L ++TF M A K E +L
Sbjct: 558 NIILNGLCKSNCVDEAFKMFQ----SLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 613
Query: 200 -----G*RQKATAFTLMG--LVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVRSLPDKG 42
G + L+ L++EG L+E D+LF M + G +P+S MLNA+VR L +G
Sbjct: 614 AIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 673
Query: 41 D 39
D
Sbjct: 674 D 674
Score = 32.7 bits (73), Expect(3) = 3e-16
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = -1
Query: 537 LFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
LF +M KGV P VTY+T L G L++ + A+++ M G DI+TY
Sbjct: 506 LFREMLRKGVTPGVVTYNTILHG-LFQTKRFSEAKELYLNMINSGTKCDIYTY 557
>ref|XP_006373668.1| hypothetical protein POPTR_0016s02630g [Populus trichocarpa]
gi|550320670|gb|ERP51465.1| hypothetical protein
POPTR_0016s02630g [Populus trichocarpa]
Length = 585
Score = 51.6 bits (122), Expect(3) = 8e-16
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = -3
Query: 685 DGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGALKFIFSD 524
+GY L R+ EA K+ + M++ GCIPD +Y LING CK++RI+ A K IF +
Sbjct: 298 NGYLLQNRVFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEA-KQIFDE 350
Score = 41.2 bits (95), Expect(3) = 8e-16
Identities = 19/53 (35%), Positives = 35/53 (66%)
Frame = -1
Query: 537 LFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
+F +M +G+ P +Y+T +SG L++VG+ A+++ + M A G +PD+ TY
Sbjct: 347 IFDEMSFRGLIPNTASYNTLISG-LFQVGRILEAKELFKDMHAQGCSPDLVTY 398
Score = 38.5 bits (88), Expect(3) = 8e-16
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Frame = -2
Query: 371 MMLDALCKSQEID*ALKVSED--NNYSQIWMYCYLGLVTFK*MAC*KLAELELRRNL--- 207
++LD L K +D AL++ ++ NNY + Y L+ A K +LE R L
Sbjct: 400 ILLDGLSKQGCLDQALELFQEMQNNYLNPDLVIYNILID----AMCKSGKLEDARELFLK 455
Query: 206 --IGG*RQKATAFT--LMGLVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVR 60
+ G ++T + GL +EG LDE F M R GC P N IVR
Sbjct: 456 LIVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVR 508
>gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 48.9 bits (115), Expect(3) = 1e-14
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Frame = -2
Query: 374 HMMLDALCKSQEID*ALKVSEDNNYSQIWMYCYLGLVTFK*M--AC*KLAELELRRNLIG 201
+++L LCK+ D AL++ ++ + + L TF M A K ++ ++L
Sbjct: 458 NIILHGLCKNNLTDEALRMFQNLCLTDL----QLETRTFNIMIGALLKCGRMDEAKDLFA 513
Query: 200 -----G*RQKATAFTLMG--LVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVRSLPDKG 42
G ++LM L+++G L+E+D+LF M GCS S MLN+IVR L +G
Sbjct: 514 AHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRG 573
Query: 41 DWT 33
D T
Sbjct: 574 DIT 576
Score = 45.1 bits (105), Expect(3) = 1e-14
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = -3
Query: 712 DIEI*NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGALKFI 533
DI T G+C GR+ E+ KL D+MV G PD Y +LI+G C + +++ A K +
Sbjct: 313 DIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 372
Query: 532 FS 527
S
Sbjct: 373 AS 374
Score = 33.5 bits (75), Expect(3) = 1e-14
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = -1
Query: 537 LFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
L + M GVKP VTY T ++G RV + A + + M + GV+P+I TY
Sbjct: 371 LLASMVSVGVKPDIVTYGTLINGYC-RVSRMDDALALFKEMVSSGVSPNIITY 422
Score = 58.5 bits (140), Expect = 5e-06
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 712 DIEI*NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGAL 542
DI NT DG CL G+MDEA+KL MVS G PD Y +LINGYC+ R++ AL
Sbjct: 348 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 404
>gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 48.9 bits (115), Expect(3) = 2e-14
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Frame = -2
Query: 374 HMMLDALCKSQEID*ALKVSEDNNYSQIWMYCYLGLVTFK*M--AC*KLAELELRRNLIG 201
+++L LCK+ D AL++ ++ + + L TF M A K ++ ++L
Sbjct: 625 NIILHGLCKNNLTDEALRMFQNLCLTDL----QLETRTFNIMIGALLKCGRMDEAKDLFA 680
Query: 200 -----G*RQKATAFTLMG--LVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVRSLPDKG 42
G ++LM L+++G L+E+D+LF M GCS S MLN+IVR L +G
Sbjct: 681 AHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRG 740
Query: 41 DWT 33
D T
Sbjct: 741 DIT 743
Score = 44.3 bits (103), Expect(3) = 2e-14
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = -3
Query: 697 NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGALKFIFS 527
N+ D +C GR+ E+ KL D+MV G PD Y +LI+G C + +++ A K + S
Sbjct: 485 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541
Score = 33.5 bits (75), Expect(3) = 2e-14
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = -1
Query: 537 LFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
L + M GVKP VTY T ++G RV + A + + M + GV+P+I TY
Sbjct: 538 LLASMVSVGVKPDIVTYGTLINGYC-RVSRMDDALALFKEMVSSGVSPNIITY 589
Score = 58.5 bits (140), Expect = 5e-06
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 712 DIEI*NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGAL 542
DI NT DG CL G+MDEA+KL MVS G PD Y +LINGYC+ R++ AL
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571
>ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial
precursor, putative, expressed [Oryza sativa Japonica
Group] gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza
sativa Japonica Group]
Length = 782
Score = 48.9 bits (115), Expect(3) = 2e-14
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Frame = -2
Query: 374 HMMLDALCKSQEID*ALKVSEDNNYSQIWMYCYLGLVTFK*M--AC*KLAELELRRNLIG 201
+++L LCK+ D AL++ ++ + + L TF M A K ++ ++L
Sbjct: 625 NIILHGLCKNNLTDEALRMFQNLCLTDL----QLETRTFNIMIGALLKCGRMDEAKDLFA 680
Query: 200 -----G*RQKATAFTLMG--LVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVRSLPDKG 42
G ++LM L+++G L+E+D+LF M GCS S MLN+IVR L +G
Sbjct: 681 AHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRG 740
Query: 41 DWT 33
D T
Sbjct: 741 DIT 743
Score = 44.3 bits (103), Expect(3) = 2e-14
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = -3
Query: 697 NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGALKFIFS 527
N+ D +C GR+ E+ KL D+MV G PD Y +LI+G C + +++ A K + S
Sbjct: 485 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541
Score = 33.5 bits (75), Expect(3) = 2e-14
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = -1
Query: 537 LFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
L + M GVKP VTY T ++G RV + A + + M + GV+P+I TY
Sbjct: 538 LLASMVSVGVKPDIVTYGTLINGYC-RVSRMDDALALFKEMVSSGVSPNIITY 589
Score = 58.5 bits (140), Expect = 5e-06
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 712 DIEI*NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGAL 542
DI NT DG CL G+MDEA+KL MVS G PD Y +LINGYC+ R++ AL
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571
>ref|XP_006302023.1| hypothetical protein CARUB_v10020005mg [Capsella rubella]
gi|482570733|gb|EOA34921.1| hypothetical protein
CARUB_v10020005mg [Capsella rubella]
Length = 609
Score = 53.9 bits (128), Expect(3) = 3e-14
Identities = 22/57 (38%), Positives = 39/57 (68%)
Frame = -3
Query: 724 SITLDIEI*NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRI 554
SI D+ ++ +G+C+ R+DEA ++ ++MV +GC P+ Y +LI G+CKS+R+
Sbjct: 335 SIDPDVFTYSSLINGFCMHDRLDEAKQMFELMVRKGCFPNVVTYNTLIKGFCKSKRV 391
Score = 38.1 bits (87), Expect(3) = 3e-14
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = -1
Query: 537 LFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
LF +M +G+ +TY+T + G ++ G A+++ ++M +DGV PDI TY
Sbjct: 397 LFREMSQRGLVGDAITYTTLVQGF-FQAGDCVRAQEVFKQMVSDGVPPDIMTY 448
Score = 33.9 bits (76), Expect(3) = 3e-14
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Frame = -2
Query: 374 HMMLDALCKSQEID*ALKVSEDNNYSQIWMYCYLGLVTFK*MAC*KLAE--LELRRNL-I 204
+++LD LCK+ +++ AL V E S I + + + M K E +L +L +
Sbjct: 449 NILLDGLCKNGKLEEALVVFEYMQKSTIELDICTYNIMIEGMCNAKKVEDAWKLFCSLSL 508
Query: 203 GG*RQKATAFTLM--GLVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVRSLPDKGD 39
G + ++ M GL ++G DE D LF M+ G P+ N ++R+ GD
Sbjct: 509 KGVKPNVVIYSTMISGLCRKGLKDEADVLFRKMKEDGHLPNDRTYNTLIRAYLRDGD 565
>dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 55.5 bits (132), Expect(3) = 4e-14
Identities = 25/64 (39%), Positives = 40/64 (62%)
Frame = -3
Query: 730 TSSITLDIEI*NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRIN 551
T I D N+ DG+C + EA+++ D+MVS+GC PD Y+ LIN YCK++R++
Sbjct: 372 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 431
Query: 550 GALK 539
++
Sbjct: 432 DGMR 435
Score = 37.0 bits (84), Expect(3) = 4e-14
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Frame = -2
Query: 371 MMLDALCKSQEID*ALKVSEDNNYSQIWMYCYLGLVTFK*MAC*KLAELELRRNLI---- 204
++LD LC + E++ AL++ E S+ M +G+ ++++ +L
Sbjct: 489 ILLDGLCDNGELNKALEIFEKMQKSR--MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 546
Query: 203 -GG*RQKATAFTLM--GLVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVRS 57
G + + +M GL K+G L E D LF M+ GC+P N ++R+
Sbjct: 547 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 598
Score = 33.1 bits (74), Expect(3) = 4e-14
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = -1
Query: 537 LFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
LF ++ KG+ P +TY+T + G + G+ AA+++ + M + GV P + TY
Sbjct: 436 LFREISSKGLIPNTITYNTLVLGFC-QSGKLNAAKELFQEMVSRGVPPSVVTY 487
Score = 42.0 bits (97), Expect(2) = 2e-06
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = -1
Query: 540 SLFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
SLF + KGVKP VTY+ + G L + G A+ + R+M+ DG PD +TY
Sbjct: 540 SLFCSLSDKGVKPDVVTYNVMIGG-LCKKGSLSEADMLFRKMKEDGCTPDDFTY 592
Score = 38.1 bits (87), Expect(2) = 2e-06
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -3
Query: 697 NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGALK 539
NT G+C G+++ A +L MVS G P Y L++G C + +N AL+
Sbjct: 453 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 505
>ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis
thaliana] gi|51968798|dbj|BAD43091.1| hypothetical
protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 55.5 bits (132), Expect(3) = 4e-14
Identities = 25/64 (39%), Positives = 40/64 (62%)
Frame = -3
Query: 730 TSSITLDIEI*NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRIN 551
T I D N+ DG+C + EA+++ D+MVS+GC PD Y+ LIN YCK++R++
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 550 GALK 539
++
Sbjct: 403 DGMR 406
Score = 37.0 bits (84), Expect(3) = 4e-14
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Frame = -2
Query: 371 MMLDALCKSQEID*ALKVSEDNNYSQIWMYCYLGLVTFK*MAC*KLAELELRRNLI---- 204
++LD LC + E++ AL++ E S+ M +G+ ++++ +L
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSR--MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 517
Query: 203 -GG*RQKATAFTLM--GLVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVRS 57
G + + +M GL K+G L E D LF M+ GC+P N ++R+
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 33.1 bits (74), Expect(3) = 4e-14
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = -1
Query: 537 LFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
LF ++ KG+ P +TY+T + G + G+ AA+++ + M + GV P + TY
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFC-QSGKLNAAKELFQEMVSRGVPPSVVTY 458
Score = 42.0 bits (97), Expect(2) = 2e-06
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = -1
Query: 540 SLFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
SLF + KGVKP VTY+ + G L + G A+ + R+M+ DG PD +TY
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGG-LCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
Score = 38.1 bits (87), Expect(2) = 2e-06
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -3
Query: 697 NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGALK 539
NT G+C G+++ A +L MVS G P Y L++G C + +N AL+
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
>ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 550
Score = 63.2 bits (152), Expect(2) = 5e-14
Identities = 28/62 (45%), Positives = 44/62 (70%)
Frame = -3
Query: 724 SITLDIEI*NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGA 545
SI DI ++ +G CL R+DEA+++ D+MVS+GC PD +Y +LING+CK++R+
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDG 349
Query: 544 LK 539
+K
Sbjct: 350 MK 351
Score = 42.4 bits (98), Expect(2) = 5e-14
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = -1
Query: 537 LFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
LF +M +G+ VTY+T + G ++VG A++ +M++ GV+PDIWTY
Sbjct: 352 LFRKMSQRGLVNNTVTYNTLIQGF-FQVGDVDKAQEFFSQMDSFGVSPDIWTY 403
>gb|EMJ09871.1| hypothetical protein PRUPE_ppa023798mg [Prunus persica]
Length = 590
Score = 53.1 bits (126), Expect(3) = 8e-14
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = -3
Query: 694 TPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGALKFIFSDALQ 515
T DGYCL G M +A ++ ++M+S+G + + +Y LINGYCK+++I+ A+ + +
Sbjct: 316 TLMDGYCLRGEMGKAQEVFELMLSKGLVVNVVSYNILINGYCKNKKIDEAMMLFLDMSHK 375
Query: 514 G 512
G
Sbjct: 376 G 376
Score = 36.6 bits (83), Expect(3) = 8e-14
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = -1
Query: 537 LFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
LF M KG+ P+ VTYST L G + G+ A+ + +M+A G PD TY
Sbjct: 368 LFLDMSHKGLVPSTVTYSTLLDGFC-KTGRIQDAQNLFSKMQACGQLPDAQTY 419
Score = 34.7 bits (78), Expect(3) = 8e-14
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Frame = -2
Query: 371 MMLDALCKSQEID*ALKVSEDNNYSQIWMYCYLGLVTFK*MAC*KLAELELRRNLIGG*R 192
++LD LCK++++ A+++ + ++ + + + + + ++E R+L G
Sbjct: 421 ILLDGLCKNRQLSRAMQLFGEMEAKKLDIDIVIYSILIEGLCI--AGKIESARDLFCGLS 478
Query: 191 QKAT-----AFTLM--GLVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVRSL 54
K +T+M GL G E + L M GCSP+ N I+R L
Sbjct: 479 SKGLQPDVRTYTIMINGLCIGGLTSEAEKLLVEMEGKGCSPNGCTYNTIIRGL 531
>ref|XP_006302102.1| hypothetical protein CARUB_v10020093mg [Capsella rubella]
gi|482570812|gb|EOA35000.1| hypothetical protein
CARUB_v10020093mg [Capsella rubella]
Length = 549
Score = 62.4 bits (150), Expect(2) = 1e-13
Identities = 27/62 (43%), Positives = 44/62 (70%)
Frame = -3
Query: 724 SITLDIEI*NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGA 545
SI DI ++ +G C+ R+DEA+++ D+MVS+GC PD +Y +LING+CK++R+
Sbjct: 291 SIDPDIVTYSSLINGLCMHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDG 350
Query: 544 LK 539
+K
Sbjct: 351 MK 352
Score = 42.0 bits (97), Expect(2) = 1e-13
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = -1
Query: 537 LFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
LF +M +G+ + VTY+T + G ++ G A++ +M++ GV+PDIWTY
Sbjct: 353 LFCEMTQRGLVSSTVTYNTLIQGF-FQAGDVDKAQEFFSQMDSFGVSPDIWTY 404
>gb|EMS62736.1| Protein Rf1, mitochondrial [Triticum urartu]
Length = 835
Score = 63.2 bits (152), Expect(2) = 1e-13
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = -3
Query: 697 NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGAL 542
N+ DGYCL+G+MD+A K+ D+M S G PD F Y++L+NGYC++ RI+ L
Sbjct: 547 NSLIDGYCLVGKMDKALKVLDVMESVGVEPDVFTYSTLVNGYCRNGRIDDGL 598
Score = 40.8 bits (94), Expect(2) = 1e-13
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -1
Query: 540 SLFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
+LF +MP K +KP V+Y + G L+R G+ AA +M M G DI+TY
Sbjct: 599 TLFREMPRKRIKPDTVSYHVIMVG-LFRAGRTVAARKMFHEMTESGTMVDIFTY 651
>gb|EMT02311.1| hypothetical protein F775_12462 [Aegilops tauschii]
Length = 715
Score = 49.7 bits (117), Expect(3) = 2e-13
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Frame = -2
Query: 371 MMLDALCKSQEID*ALKVSEDNNYSQIWMYCYLGLVTFK*M--AC*KLAELELRRNLIGG 198
+++D CK+ ID AL V + ++ C ++TF M A K E ++L G
Sbjct: 545 ILIDGYCKNGRIDDALVVFREMLAGKV-KPC---IITFNIMIGALLKGGRKEEAKDLFDG 600
Query: 197 *RQKATAFTLMG-------LVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVRSLPDKGD 39
K T++ L++EG L E D+LF M + GC +S MLNAIVR L KG+
Sbjct: 601 IWAKGLVPTVVTYSLMIQKLIEEGSLQESDDLFLSMEKNGCPANSRMLNAIVRRLLQKGE 660
Score = 37.0 bits (84), Expect(3) = 2e-13
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -1
Query: 573 IVKAGGSMVL*SLFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNP 394
+ K G M LF M GVKP TYST + G L+ VG+ ++ M + G++P
Sbjct: 480 LCKNGRVMEAQDLFDLMVHMGVKPDVCTYSTLIGGYLF-VGKMDEVSKLLDNMVSIGMDP 538
Query: 393 DIWTY 379
D+ TY
Sbjct: 539 DVITY 543
Score = 36.2 bits (82), Expect(3) = 2e-13
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -3
Query: 676 CLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYC 569
C +GRMD+A + M++EG +P ++ LI+G+C
Sbjct: 411 CSMGRMDDAMSQYNQMITEGLLPGIILFSQLISGFC 446
>gb|EMJ05176.1| hypothetical protein PRUPE_ppa025246mg, partial [Prunus persica]
Length = 529
Score = 58.5 bits (140), Expect(3) = 4e-13
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = -3
Query: 697 NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGAL 542
N+ +GYCL G MD+A ++ D+M+ +G I D F+Y+ LINGYC RR+ A+
Sbjct: 267 NSLMEGYCLQGDMDKAKRIFDLMLKKGSIVDVFSYSILINGYCNERRMKEAM 318
Score = 32.3 bits (72), Expect(3) = 4e-13
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -1
Query: 534 FSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
F +M KG+ P VTY+T + G + G+ A+ M +M+ G P+I TY
Sbjct: 321 FEEMTRKGMVPDIVTYTTLIGGFC-KEGRIDDAQNMFSKMKVGGPLPNIHTY 371
Score = 31.2 bits (69), Expect(3) = 4e-13
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Frame = -2
Query: 383 HI*HMMLDALCKSQEID*ALKVSEDNNYSQ----IWMYCYL--GLVTFK*MAC*KLAELE 222
H ++LD LC++++ID ALK+ + S I +Y L GL T + +E
Sbjct: 369 HTYSVLLDGLCRNRQIDMALKLFGELEGSSLDFGIGLYNILINGLCTAR--------RIE 420
Query: 221 LRRNLI-----GG*RQKATAFTLM--GLVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIV 63
R+L G + +T++ L +G E + M GCSP + N I+
Sbjct: 421 CARDLFCSFPSKGLQPDVKTYTILIIALSTKGLFSEAEAFLRGMEEKGCSPDTVTYNTII 480
Query: 62 R 60
+
Sbjct: 481 Q 481
>ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 58.2 bits (139), Expect(2) = 4e-13
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = -3
Query: 712 DIEI*NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGAL 542
DI N+ DGYCL+G+MD+A + D MVS G PD Y++LINGY KS RI+ L
Sbjct: 587 DIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGL 643
Score = 44.3 bits (103), Expect(2) = 4e-13
Identities = 26/53 (49%), Positives = 31/53 (58%)
Frame = -1
Query: 537 LFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
LF +M CK VKPT VTYS L G L+R G+ AA++M M G I TY
Sbjct: 645 LFREMLCKRVKPTTVTYSLVLDG-LFRAGRTSAAKKMFHEMIESGTAMSISTY 696
>gb|EMJ19030.1| hypothetical protein PRUPE_ppa025996mg, partial [Prunus persica]
Length = 515
Score = 52.4 bits (124), Expect(3) = 5e-13
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = -3
Query: 697 NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGALKFI 533
N+ DGYCL G M +A K+ +M S+G + + F+Y+ LINGYCK + ++ A+ +
Sbjct: 260 NSLMDGYCLRGEMSKARKVFKLMPSKGSMVNVFSYSILINGYCKRKMMDEAMMLL 314
Score = 35.4 bits (80), Expect(3) = 5e-13
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = -1
Query: 537 LFSQMPCKGVKPTDVTYSTKLSGILYRVGQDFAAEQM*RRMEADGVNPDIWTY 379
L +M KG+ P VTYST G +VG+ A+++ M+A G PD+ TY
Sbjct: 313 LLQEMSRKGLVPDTVTYSTLADGFC-KVGKLGDAQKLFSEMQACGQLPDVQTY 364
Score = 33.9 bits (76), Expect(3) = 5e-13
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Frame = -2
Query: 371 MMLDALCKSQEID*ALKVSEDNNYSQIWMYCYLGLVTFK*MAC*KLAELELRRNLIGG*R 192
++LD LCK++++ A+++ ++ ++ + + + + + ++E R L G
Sbjct: 366 VLLDGLCKNRQLSTAIQLFKEMEGKKLDVNIVIYTILIEGLCI--AEKIESARELFFGLS 423
Query: 191 QKAT-----AFTLM--GLVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVR 60
+ +T+M GL G+ E + L M GCSP+ N I+R
Sbjct: 424 SRGLQPNVRTYTIMINGLCIGGRTSEAEKLLIEMEEKGCSPNGWTYNIIIR 474
>gb|EMT32271.1| hypothetical protein F775_20357 [Aegilops tauschii]
Length = 772
Score = 56.6 bits (135), Expect(2) = 5e-13
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = -3
Query: 712 DIEI*NTPTDGYCLLGRMDEASKLSDIMVSEGCIPDRFNYTSLINGYCKSRRINGALKFI 533
D+ + N+ DGYCL+G+++EA ++ D M S G PD Y L+NGYCK +I L
Sbjct: 492 DVIMYNSLMDGYCLVGKVEEALRVLDAMKSAGLQPDAITYAILLNGYCKIGKIADGLSLF 551
Query: 532 FSDALQG 512
+L G
Sbjct: 552 REMSLSG 558
Score = 45.4 bits (106), Expect(2) = 5e-13
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Frame = -2
Query: 482 PNYLEYSI---GLVKISLQSKCREEWKLMVL------IQIFGHI*HMMLDALCKSQEID* 330
P + YSI GL + +E++ MV ++ + + H + C + I+
Sbjct: 561 PTTIMYSIILDGLFRSGRTVSAKEKFNTMVESGLPVDVRTYNIVLHGLCRNNCTGEAIEL 620
Query: 329 ALKVSEDNNYSQIWMYCYLGLVTFK*M--AC*KLAELELRRNLIG-----G*RQKATAFT 171
K+ N + ++TF M A K +E ++L G +T
Sbjct: 621 FKKLCATN--------VKINVITFNTMISAMFKTRRIEEAKDLFATIPAIGLVPSVVTYT 672
Query: 170 LM--GLVKEGQLDEVDNLFFLMRRAGCSPSSSMLNAIVRSLPDKG 42
+M +KEG L E D++F M +AGC+P +LN +VR L +KG
Sbjct: 673 VMMTNFIKEGLLAEADDMFLAMEKAGCAPDCRLLNHVVRVLLEKG 717