BLASTX nr result

ID: Stemona21_contig00042411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00042411
         (404 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    60   4e-07
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    59   7e-07
ref|XP_004238401.1| PREDICTED: F-box protein SKIP23-like [Solanu...    55   9e-06

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
 Frame = -3

Query: 366 TKYFFVYLLIDEELRGVEIDTIRDAMLFVSR--ISSCASVTLPGCPADSIYFTDAYLDEN 193
           T  F V  L  +  R   + ++ D  LF+      S +SV  PGC  + IY+TD Y ++N
Sbjct: 287 TTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDN 346

Query: 192 DEGLG----VCIFHLEDKSIERLPFNMGKFDHDLPPPIWFTP 79
            +G+G    + IF+LED SIE LP     F    PPP+W TP
Sbjct: 347 YDGIGGEQDLGIFNLEDGSIEPLP--CSHFRIRWPPPLWVTP 386


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
 Frame = -3

Query: 312 IDTIRDAMLFVSR--ISSCASVTLPGCPADSIYFTDAYLDENDEGLG----VCIFHLEDK 151
           + ++ D  LF+      S +SV  PGC  + IY+TD Y ++N +G+G    + IF+LED 
Sbjct: 305 VSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDG 364

Query: 150 SIERLPFNMGKFDHDLPPPIWFTP 79
           SIE LP     F    PPP+W TP
Sbjct: 365 SIEPLP--CSHFRIRWPPPLWVTP 386


>ref|XP_004238401.1| PREDICTED: F-box protein SKIP23-like [Solanum lycopersicum]
          Length = 402

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
 Frame = -3

Query: 366 TKYFFVYLLIDEELR--GVEIDTIRDAMLFVSRISSCASVT--LPGCPADSIYFTDAYLD 199
           T  F V+ L+ E  R    EI+++ + MLF+   SS A +    PGC  + IYFTD Y +
Sbjct: 294 TVEFCVFRLVLERPRCEWEEINSLGETMLFLGENSSLALLASDFPGCGGNRIYFTDDYCE 353

Query: 198 ENDEGL----GVCIFHLEDKSIERLPFNMGKFDHDL---PPPIWFTP 79
            N +G+     +  ++L D SIE L     +  H +   PPPIWFTP
Sbjct: 354 ANYDGVDGNHDLGYYNLADGSIEALSC-CPRSSHSMLRWPPPIWFTP 399


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