BLASTX nr result

ID: Stemona21_contig00041802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00041802
         (344 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621319.1| Pentatricopeptide repeat-containing protein ...    61   1e-07
ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07
gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]      57   2e-06
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05

>ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496334|gb|AES77537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 605

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 29/68 (42%), Positives = 38/68 (55%)
 Frame = +3

Query: 138 SHRRLLELHLADLHRCSCPRLIKEVHAQAIKAHLHLDPFVAPKFVXXXXXXXXXXXXXXX 317
           S RR LE ++ DLH+C+ P  IK++HAQ IK HLH DP++APK +               
Sbjct: 17  SLRRHLEENITDLHKCTNPNHIKQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNV 76

Query: 318 XXXVPRPN 341
              VP PN
Sbjct: 77  FNQVPDPN 84


>ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Fragaria vesca subsp. vesca]
          Length = 605

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = +3

Query: 138 SHRRLLELHLADLHRCSCPRLIKEVHAQAIKAHLHLDPFVAPKFV 272
           S RRLL+ +L+DLHRC+    IK+VHAQ +KAHLH DP  APK +
Sbjct: 14  SRRRLLDQNLSDLHRCTNLAHIKQVHAQILKAHLHQDPHTAPKLI 58


>gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]
          Length = 599

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/68 (42%), Positives = 38/68 (55%)
 Frame = +3

Query: 138 SHRRLLELHLADLHRCSCPRLIKEVHAQAIKAHLHLDPFVAPKFVXXXXXXXXXXXXXXX 317
           S R+LLE  L  LH+C+    IK++HAQ I+A+LHLDPFVAPK +               
Sbjct: 14  SPRKLLEQKLTHLHKCANILHIKQLHAQIIRANLHLDPFVAPKLIAAFSLCRQIALAVNV 73

Query: 318 XXXVPRPN 341
              +P PN
Sbjct: 74  FDQIPEPN 81


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/68 (41%), Positives = 36/68 (52%)
 Frame = +3

Query: 138 SHRRLLELHLADLHRCSCPRLIKEVHAQAIKAHLHLDPFVAPKFVXXXXXXXXXXXXXXX 317
           S RRLLE  L DLH+C+    + ++HAQ +KA+LH D FVAPK +               
Sbjct: 16  SRRRLLEEKLCDLHKCTNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNV 75

Query: 318 XXXVPRPN 341
              VP PN
Sbjct: 76  FNHVPHPN 83


>ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/68 (41%), Positives = 36/68 (52%)
 Frame = +3

Query: 138 SHRRLLELHLADLHRCSCPRLIKEVHAQAIKAHLHLDPFVAPKFVXXXXXXXXXXXXXXX 317
           S +RLLE  L DLH+CS    + ++HAQ +KA+LH D FVAPK +               
Sbjct: 16  SRQRLLEEKLCDLHKCSNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNV 75

Query: 318 XXXVPRPN 341
              VP PN
Sbjct: 76  FNHVPHPN 83


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