BLASTX nr result
ID: Stemona21_contig00040588
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00040588
(443 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|A6MMT6.2|RPOB_ILLOL RecName: Full=DNA-directed RNA polymerase... 59 9e-07
ref|YP_001294262.1| RNA polymerase beta subunit [Illicium oligan... 59 9e-07
gb|AHA12831.1| RNA polymerase beta subunit [Maranta leuconeura] 58 1e-06
ref|YP_008578080.1| RNA polymerase beta subunit (chloroplast) [A... 57 2e-06
gb|AFB18355.1| RNA polymerase beta subunit [Syngonanthus chrysan... 57 3e-06
gb|AFB18322.1| RNA polymerase beta subunit, partial [Apostasia w... 57 3e-06
ref|YP_001294176.1| RNA polymerase beta subunit [Buxus microphyl... 57 3e-06
gb|AHI87519.1| RNA polymerase beta subunit (chloroplast) [Chiono... 56 4e-06
gb|AHH24325.1| RNA polymerase beta subunit (chloroplast) [Japono... 56 4e-06
ref|YP_008993684.1| RNA polymerase beta subunit (chloroplast) [M... 56 4e-06
gb|AHE41618.1| RNA polymerase beta subunit protein (chloroplast)... 56 4e-06
ref|YP_008993856.1| RNA polymerase beta subunit (chloroplast) [M... 56 4e-06
ref|YP_008993770.1| RNA polymerase beta subunit (chloroplast) [M... 56 4e-06
ref|YP_008993598.1| RNA polymerase beta subunit (chloroplast) [M... 56 4e-06
ref|YP_008993512.1| RNA polymerase beta subunit (chloroplast) [M... 56 4e-06
ref|YP_008993426.1| RNA polymerase beta subunit (chloroplast) [M... 56 4e-06
ref|YP_008993254.1| RNA polymerase beta subunit (chloroplast) [M... 56 4e-06
ref|YP_008993168.1| RNA polymerase beta subunit (chloroplast) [M... 56 4e-06
ref|YP_008854586.1| RNA polymerase beta subunit [Curcuma roscoea... 56 4e-06
gb|AHA13002.1| RNA polymerase beta subunit [Costus pulverulentus] 56 4e-06
>sp|A6MMT6.2|RPOB_ILLOL RecName: Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
Length = 1070
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSY+ K IHQV KIHG SSGHY LVT+Q LR AKHGG
Sbjct: 944 KSYMMKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKHGG 982
>ref|YP_001294262.1| RNA polymerase beta subunit [Illicium oligandrum]
gi|147917387|gb|ABQ52511.1| RNA polymerase beta subunit
[Illicium oligandrum]
Length = 1062
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSY+ K IHQV KIHG SSGHY LVT+Q LR AKHGG
Sbjct: 936 KSYMMKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKHGG 974
>gb|AHA12831.1| RNA polymerase beta subunit [Maranta leuconeura]
Length = 1070
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/39 (74%), Positives = 30/39 (76%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHYTLVT+Q LR AK GG
Sbjct: 944 KSYILKLIHQVDDKIHGRSSGHYTLVTQQPLRGRAKQGG 982
>ref|YP_008578080.1| RNA polymerase beta subunit (chloroplast) [Allosyncarpia ternata]
gi|442569327|gb|AGC59489.1| RNA polymerase beta subunit
(chloroplast) [Allosyncarpia ternata]
Length = 1072
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
K YI K IHQV KIHG SSGHY LVT+Q LR AKHGG
Sbjct: 946 KPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKHGG 984
>gb|AFB18355.1| RNA polymerase beta subunit [Syngonanthus chrysanthus]
Length = 1070
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY+LVT+Q LR AK GG
Sbjct: 944 KSYIFKLIHQVDDKIHGRSSGHYSLVTQQPLRGRAKQGG 982
>gb|AFB18322.1| RNA polymerase beta subunit, partial [Apostasia wallichii]
Length = 1081
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 955 KSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGKAKQGG 993
>ref|YP_001294176.1| RNA polymerase beta subunit [Buxus microphylla]
gi|158513756|sp|A6MM28.1|RPOB_BUXMI RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|146762277|gb|ABQ45241.1| RNA polymerase beta subunit
[Buxus microphylla]
Length = 1070
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 944 KSYIMKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 982
>gb|AHI87519.1| RNA polymerase beta subunit (chloroplast) [Chionographis japonica]
Length = 1070
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 944 KSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 982
>gb|AHH24325.1| RNA polymerase beta subunit (chloroplast) [Japonolirion osense]
Length = 1070
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 944 KSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 982
>ref|YP_008993684.1| RNA polymerase beta subunit (chloroplast) [Magnolia salicifolia]
Length = 1079
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 953 KSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 991
>gb|AHE41618.1| RNA polymerase beta subunit protein (chloroplast) [Ribes fasciculatum
var. chinense]
Length = 1070
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 944 KSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 982
>ref|YP_008993856.1| RNA polymerase beta subunit (chloroplast) [Magnolia sprengeri]
Length = 1079
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 953 KSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 991
>ref|YP_008993770.1| RNA polymerase beta subunit (chloroplast) [Magnolia sinica]
Length = 1079
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 953 KSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 991
>ref|YP_008993598.1| RNA polymerase beta subunit (chloroplast) [Magnolia odora]
Length = 1079
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 953 KSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 991
>ref|YP_008993512.1| RNA polymerase beta subunit (chloroplast) [Magnolia liliifera]
Length = 1079
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 953 KSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 991
>ref|YP_008993426.1| RNA polymerase beta subunit (chloroplast) [Magnolia kobus]
Length = 1079
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 953 KSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 991
>ref|YP_008993254.1| RNA polymerase beta subunit (chloroplast) [Magnolia dealbata]
gi|570759917|ref|YP_008993340.1| RNA polymerase beta
subunit (chloroplast) [Magnolia pyramidata]
Length = 1079
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 953 KSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 991
>ref|YP_008993168.1| RNA polymerase beta subunit (chloroplast) [Magnolia cathcartii]
Length = 1079
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 953 KSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 991
>ref|YP_008854586.1| RNA polymerase beta subunit [Curcuma roscoeana]
gi|557637493|gb|AHA13088.1| RNA polymerase beta subunit
[Curcuma roscoeana]
Length = 1082
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 956 KSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 994
>gb|AHA13002.1| RNA polymerase beta subunit [Costus pulverulentus]
Length = 1074
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -1
Query: 443 KSYIGKFIHQVYGKIHGHSSGHYTLVTEQYLRRSAKHGG 327
KSYI K IHQV KIHG SSGHY LVT+Q LR AK GG
Sbjct: 948 KSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 986