BLASTX nr result
ID: Stemona21_contig00040424
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00040424
(428 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ27345.1| hypothetical protein PRUPE_ppa014865mg, partial [... 91 1e-16
ref|XP_006371087.1| hypothetical protein POPTR_0019s03450g, part... 69 5e-10
gb|ABA99372.1| retrotransposon protein, putative, Ty3-gypsy subc... 69 6e-10
gb|ABA99251.1| hypothetical protein LOC_Os12g40640 [Oryza sativa... 69 6e-10
gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subc... 69 6e-10
gb|AAX96229.1| retrotransposon protein, putative, Ty3-gypsy sub-... 69 6e-10
emb|CAE02911.3| OSJNBb0108J11.3 [Oryza sativa Japonica Group] 69 6e-10
emb|CAE03089.2| OSJNBa0017B10.4 [Oryza sativa Japonica Group] 69 6e-10
gb|AAP53741.2| transposon protein, putative, CACTA, En/Spm sub-c... 69 6e-10
gb|ABG66247.1| retrotransposon protein, putative, Ty3-gypsy subc... 69 6e-10
tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacillifo... 69 6e-10
tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacillifo... 69 6e-10
gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subc... 68 1e-09
tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacillifo... 68 1e-09
emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group] gi... 68 1e-09
gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group] 65 1e-08
gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1] 64 3e-08
ref|NP_569141.1| polyprotein [Tobacco vein clearing virus] gi|64... 63 3e-08
emb|CAC88788.1| putative polyprotein [Nicotiana tabacum] 61 2e-07
emb|CAB42622.1| putative polyprotein (aspartic proteinase, rever... 61 2e-07
>gb|EMJ27345.1| hypothetical protein PRUPE_ppa014865mg, partial [Prunus persica]
Length = 198
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/88 (56%), Positives = 59/88 (67%)
Frame = +3
Query: 3 RLAEQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDL 182
+LAEQT I +PQ HWNKNK +A + II+ DLTIK D NL D EF Q KELL+L
Sbjct: 14 QLAEQTRIRGEDPQLHWNKNKILAKLDIISPDLTIKATDMPYNLLDKQEFEQQKKELLNL 73
Query: 183 KVIRKFYSRHRSPAFMVRNHAQKFRYNF 266
KVIR SRHRS AF+VR H++ R F
Sbjct: 74 KVIRPSKSRHRSAAFVVRKHSKLKRGKF 101
>ref|XP_006371087.1| hypothetical protein POPTR_0019s03450g, partial [Populus
trichocarpa] gi|550316684|gb|ERP48884.1| hypothetical
protein POPTR_0019s03450g, partial [Populus trichocarpa]
Length = 579
Score = 69.3 bits (168), Expect = 5e-10
Identities = 39/82 (47%), Positives = 49/82 (59%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
+Q EII + P K W++ K I I N DL I A+ E+ F IQIKELLDL VI
Sbjct: 473 QQLEIIGDKPLKFWDQQKTICTITPANPDLIITEKAIPASNEEINWFEIQIKELLDLGVI 532
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
++ S HRS AF V NHA++ R
Sbjct: 533 QRTQSPHRSAAFFVNNHAEQVR 554
>gb|ABA99372.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1098
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
E +II P K+W KN I IIN + IK +A +D EF++ I+ELL L I
Sbjct: 484 EDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAI 543
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
R+ S HRS AF+VRNHA++ R
Sbjct: 544 RESRSPHRSAAFIVRNHAEEVR 565
>gb|ABA99251.1| hypothetical protein LOC_Os12g40640 [Oryza sativa Japonica Group]
Length = 488
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
E +II P K+W KN I IIN + IK +A +D EF++ I+ELL L I
Sbjct: 82 EDIQIIGEIPMKYWKKNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAI 141
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
R+ S HRS AF+VRNHA++ R
Sbjct: 142 RESRSPHRSAAFIVRNHAEEVR 163
>gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 730
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
E +II P K+W KN I IIN + IK +A +D EF++ I+ELL L I
Sbjct: 88 EDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIKEFKMHIEELLKLGAI 147
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
R+ S HRS AF+VRNHA++ R
Sbjct: 148 RESRSPHRSAAFIVRNHAEEVR 169
>gb|AAX96229.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77549888|gb|ABA92685.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 695
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
E +II P K+W KN I IIN + IK +A +D EF++ I+ELL L I
Sbjct: 545 EDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAI 604
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
R+ S HRS AF+VRNHA++ R
Sbjct: 605 RESRSPHRSAAFIVRNHAEEVR 626
>emb|CAE02911.3| OSJNBb0108J11.3 [Oryza sativa Japonica Group]
Length = 968
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
E+ +II P K+W KN I IIN + IK +A +D EF + I+ELL L I
Sbjct: 541 EEIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFNMHIEELLKLGAI 600
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
R+ S HRS AF+VRNHA++ R
Sbjct: 601 RESRSPHRSAAFIVRNHAEEVR 622
>emb|CAE03089.2| OSJNBa0017B10.4 [Oryza sativa Japonica Group]
Length = 429
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
E +II P K+W KN I IIN + IK +A +D EF++ I+ELL L I
Sbjct: 39 EDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAI 98
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
R+ S HRS AF+VRNHA++ R
Sbjct: 99 RESRSPHRSAAFIVRNHAEEVR 120
>gb|AAP53741.2| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
Japonica Group]
Length = 2828
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
E +II P K+W KN I IIN + IK +A +D EF++ I+ELL L I
Sbjct: 2214 EDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAI 2273
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
R+ S HRS AF+VRNHA++ R
Sbjct: 2274 RESRSPHRSAAFIVRNHAEEVR 2295
>gb|ABG66247.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 764
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
E +II P K+W KN I IIN + IK +A +D EF++ I+ELL L I
Sbjct: 150 EDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAI 209
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
R+ S HRS AF+VRNHA++ R
Sbjct: 210 RESRSPHRSAAFIVRNHAEEVR 231
>tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
Length = 1718
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
E +II P K+W KN I IIN + IK +A +D EF++ I+ELL L I
Sbjct: 1255 EDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAI 1314
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
R+ S HRS AF+VRNHA++ R
Sbjct: 1315 RESRSPHRSAAFIVRNHAEEVR 1336
>tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
Length = 1711
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
E +II P K+W KN I IIN + IK +A +D EF++ I+ELL L I
Sbjct: 1248 EDIQIIGEIPMKYWEKNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAI 1307
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
R+ S HRS AF+VRNHA++ R
Sbjct: 1308 RESRSPHRSAAFIVRNHAEEVR 1329
>gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 792
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/82 (43%), Positives = 49/82 (59%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
E +II P K+W KN I I+N + IK +A +D EF++ I+ELL L I
Sbjct: 150 EDIQIIGEIPMKYWEKNAIECKINILNPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAI 209
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
R+ S HRS AF+VRNHA++ R
Sbjct: 210 RESRSPHRSAAFIVRNHAEEVR 231
>tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
Length = 1718
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
E +II P K+W KN I IIN + IK +A +D EF++ I+ELL L I
Sbjct: 1255 EDIQIIGEIPXKYWXKNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAI 1314
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
R+ S HRS AF+VRNHA++ R
Sbjct: 1315 RESRSPHRSAAFIVRNHAEEVR 1336
>emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group]
gi|116310779|emb|CAH67571.1| H0315A08.1 [Oryza sativa
Indica Group]
Length = 685
Score = 67.8 bits (164), Expect = 1e-09
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
E +II P K+W KN I IIN + IK +A +D EF++ I+ELL L I
Sbjct: 150 EDIQIIGEIPIKYWGKNAIECKINIINPEYIIKTSPIEATPKDIEEFKMHIEELLKLGAI 209
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
R+ S HRS AF+VRNHA++ R
Sbjct: 210 RESRSPHRSAAFIVRNHAEEVR 231
>gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1326
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/82 (42%), Positives = 48/82 (58%)
Frame = +3
Query: 12 EQTEIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVI 191
E +II P +W KN I IIN + IK +A +D +F++ I+ELL L I
Sbjct: 830 EDIQIIGEIPMIYWEKNAIECKINIINPEYIIKTSPIEATPKDIEQFKMHIEELLKLGAI 889
Query: 192 RKFYSRHRSPAFMVRNHAQKFR 257
R+ S HRS AF+VRNHA++ R
Sbjct: 890 RESRSPHRSAAFIVRNHAEEVR 911
>gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]
Length = 2027
Score = 63.5 bits (153), Expect = 3e-08
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Frame = +3
Query: 21 EIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVIRKF 200
++ +NN Q ++ N I N DL I+ + + ED EF+ QIKELLDLK+IR+
Sbjct: 898 DLAKNNCQHEFSLN-------IKNPDLIIRTANLEYTPEDIEEFKKQIKELLDLKLIRRS 950
Query: 201 YSRHRSPAFMVRNHAQKFR------YNFVLKGGQNHN 293
S HRS AF+VRNHA++ R YN+ H+
Sbjct: 951 TSPHRSAAFIVRNHAEQKRGKARIVYNYKRLNDNTHD 987
>ref|NP_569141.1| polyprotein [Tobacco vein clearing virus]
gi|6425075|gb|AAF08289.1|AF190123_3 polyprotein [Tobacco
vein clearing virus]
Length = 635
Score = 63.2 bits (152), Expect = 3e-08
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +3
Query: 21 EIIRNNPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDLKVIRKF 200
++ +NP + W K+K I +I + I K N D TEF+I IK+LLD K I++
Sbjct: 178 KLYNDNPLQGWEKHKTKVKIELIEENSIITQKPLKYNFNDLTEFKIHIKDLLDNKYIQES 237
Query: 201 YSRHRSPAFMVRNHAQKFR 257
S+H SPAF+V H+++ R
Sbjct: 238 NSKHTSPAFIVNKHSEQKR 256
>emb|CAC88788.1| putative polyprotein [Nicotiana tabacum]
Length = 264
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 LAEQTEIIRN-NPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDL 182
L ++ E++ N N + W K+K I +I+ + I K N D TEF++ IKELLD
Sbjct: 171 LQDKLELLYNDNSYQGWEKHKTKIKIELIDENSIITQKPLKYNFNDLTEFKMHIKELLDN 230
Query: 183 KVIRKFYSRHRSPAFMVRNHAQK 251
K I++ S+H SPAF+V H+++
Sbjct: 231 KYIQESNSKHTSPAFIVNKHSEQ 253
>emb|CAB42622.1| putative polyprotein (aspartic proteinase, reverse transcriptase,
ribonuclease H) [Nicotiana tabacum]
Length = 636
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 6 LAEQTEIIRN-NPQKHWNKNKEIAHIRIINRDLTIKVVDAKANLEDTTEFRIQIKELLDL 182
L ++ E++ N NP + W K++ I +I+ + I K N D TEF++ IKELLD
Sbjct: 172 LQDKLELLYNDNPLQGWEKHQTKIKIELIDENSIITQKPLKYNFNDLTEFKMHIKELLDN 231
Query: 183 KVIRKFYSRHRSPAFMVRNHAQKFR 257
I++ S+H SPAF+V H+++ R
Sbjct: 232 NYIQESNSKHTSPAFIVNKHSEQKR 256