BLASTX nr result
ID: Stemona21_contig00040226
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00040226
(393 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S... 61 1e-19
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A... 60 6e-18
gb|ABA97563.1| retrotransposon protein, putative, unclassified [... 59 7e-18
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga... 62 9e-18
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 62 1e-17
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja... 59 2e-17
gb|ABB46931.2| retrotransposon protein, putative, unclassified [... 59 2e-17
gb|ABA98898.1| retrotransposon protein, putative, unclassified [... 61 2e-17
gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japo... 61 2e-17
gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi... 60 3e-17
ref|XP_002451844.1| hypothetical protein SORBIDRAFT_04g008547 [S... 58 3e-17
ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group] g... 57 3e-17
ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786... 57 6e-17
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 57 8e-17
gb|EEE66361.1| hypothetical protein OsJ_22664 [Oryza sativa Japo... 56 8e-17
gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japo... 56 1e-16
gb|EAZ08016.1| hypothetical protein OsI_30282 [Oryza sativa Indi... 57 1e-16
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 61 2e-16
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 60 2e-16
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 60 2e-16
>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
gi|241926916|gb|EES00061.1| hypothetical protein
SORBIDRAFT_03g001780 [Sorghum bicolor]
Length = 631
Score = 61.2 bits (147), Expect(2) = 1e-19
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +1
Query: 49 LGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIPKTEILP 228
+G KAPG DGIP+ F+++ WS +G Q+ + V N G P WN TI+ LIPKT
Sbjct: 21 IGDLKAPGADGIPSIFYKKFWSVVGDQVKKEVLAVLNGGPIPEGWNDTIIVLIPKTNTPQ 80
Query: 229 LLNIL 243
+L L
Sbjct: 81 MLKDL 85
Score = 60.8 bits (146), Expect(2) = 1e-19
Identities = 24/56 (42%), Positives = 40/56 (71%)
Frame = +3
Query: 222 PTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
P + + RPIS+CN +YKL++ V+ +R+K+++ ++S SQ AF+ GR I DN+ A
Sbjct: 79 PQMLKDLRPISLCNVLYKLISKVLANRLKKILPNIISNSQSAFVPGRLITDNVLLA 134
>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 719
Score = 59.7 bits (143), Expect(2) = 6e-18
Identities = 29/66 (43%), Positives = 39/66 (59%)
Frame = +1
Query: 22 LQSKRAGFLLGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVS 201
L+ K A F +G KAPG+DG PA F+Q W +++ VV F+ P N+TI+S
Sbjct: 47 LEVKNALFGIGGLKAPGVDGFPAIFYQHHWKDYASKIFNVVNTAFSSCSVPPDLNQTIIS 106
Query: 202 LIPKTE 219
LIPK E
Sbjct: 107 LIPKFE 112
Score = 56.6 bits (135), Expect(2) = 6e-18
Identities = 24/52 (46%), Positives = 40/52 (76%)
Frame = +3
Query: 237 HFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCAQ 392
+FRPIS+CNTIYK+++ ++V+RI+ + +L+ +Q +++ GR I DNI AQ
Sbjct: 119 NFRPISLCNTIYKVISKIIVARIRPFMQQLIIPNQVSYVPGRHISDNIMIAQ 170
>gb|ABA97563.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 839
Score = 59.3 bits (142), Expect(2) = 7e-18
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +1
Query: 49 LGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIPKTEILP 228
+G KAPG DG+PA F++ W +G ++ V+E N G+ P WN+T + LIPK +
Sbjct: 318 IGDLKAPGPDGMPAVFYKNFWDLMGEKITSEVQEILNGGQIPQEWNETTIVLIPKVKTFE 377
Query: 229 LLNIL 243
L+ L
Sbjct: 378 LIKDL 382
Score = 56.6 bits (135), Expect(2) = 7e-18
Identities = 24/54 (44%), Positives = 39/54 (72%)
Frame = +3
Query: 228 ITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
+ + RPISVCN +YK+++ V+ +R+K+++ +++S SQ AF GR I DNI A
Sbjct: 378 LIKDLRPISVCNVLYKIVSKVLANRLKKILPEVISQSQSAFFPGRLISDNILVA 431
>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1365
Score = 62.4 bits (150), Expect(2) = 9e-18
Identities = 28/59 (47%), Positives = 36/59 (61%)
Frame = +1
Query: 43 FLLGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIPKTE 219
F +G KAPG DGIPA F+Q+ WS +G ++R V F G WN+T + LIPK E
Sbjct: 451 FQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQEWNQTNICLIPKVE 509
Score = 53.1 bits (126), Expect(2) = 9e-18
Identities = 22/50 (44%), Positives = 35/50 (70%)
Frame = +3
Query: 240 FRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
FRPIS+CN IYK+++ ++ +R+K ++ +V+ Q AF+ GR I DN A
Sbjct: 517 FRPISLCNVIYKIISKIIANRLKPILKSIVTPYQNAFVPGRLISDNCLIA 566
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 61.6 bits (148), Expect(2) = 1e-17
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +1
Query: 43 FLLGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIPK 213
F L NK+PG DG +EFF++TWS +G L V+E F G+ WN T V+++PK
Sbjct: 456 FALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPK 512
Score = 53.5 bits (127), Expect(2) = 1e-17
Identities = 24/54 (44%), Positives = 38/54 (70%)
Frame = +3
Query: 228 ITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
ITE FRPIS CN IYK+++ ++ R++ ++ +S SQ AF+KGR + +N+ A
Sbjct: 519 ITE-FRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLA 571
>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
Length = 1888
Score = 58.9 bits (141), Expect(2) = 2e-17
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +1
Query: 43 FLLGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIPKTE 219
F +G KAPG DG P F+Q+ W+ + + R V+E F+ G PS N+T + LIPKTE
Sbjct: 1009 FQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVLIPKTE 1067
Score = 55.8 bits (133), Expect(2) = 2e-17
Identities = 24/56 (42%), Positives = 38/56 (67%)
Frame = +3
Query: 222 PTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
P + FRPIS+CN +YK+++ +V+R++ ++ LVS +Q AF+ GR I DN A
Sbjct: 1069 PQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLVSQNQSAFVPGRLITDNALIA 1124
>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1853
Score = 58.9 bits (141), Expect(2) = 2e-17
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +1
Query: 43 FLLGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIPKTE 219
F +G KAPG DG P F+Q+ W+ + + R V+E F+ G PS N+T + LIPKTE
Sbjct: 974 FQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVLIPKTE 1032
Score = 55.8 bits (133), Expect(2) = 2e-17
Identities = 24/56 (42%), Positives = 38/56 (67%)
Frame = +3
Query: 222 PTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
P + FRPIS+CN +YK+++ +V+R++ ++ LVS +Q AF+ GR I DN A
Sbjct: 1034 PQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLVSQNQSAFVPGRLITDNALIA 1089
>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1188
Score = 60.8 bits (146), Expect(2) = 2e-17
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +1
Query: 16 PNLQSKRAGFLL----GKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHW 183
PNL R L+ G KAPG DG PA FFQ+ W + ++ + VKE FN G P+
Sbjct: 289 PNLDHSRVTTLIQEKIGPLKAPGPDGFPARFFQRNWGLLKEEVVKAVKEFFNTGVMPAGV 348
Query: 184 NKTIVSLIPKTE 219
N+T + LIPK +
Sbjct: 349 NETAIVLIPKVD 360
Score = 53.9 bits (128), Expect(2) = 2e-17
Identities = 22/56 (39%), Positives = 38/56 (67%)
Frame = +3
Query: 222 PTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
P +RPIS+CN +YK+++ +V+R++ ++ +L+S +Q AF+ GR I DN A
Sbjct: 362 PIELRDYRPISLCNVLYKVVSKCLVNRLRPILDELISPNQSAFVPGRMITDNALIA 417
>gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japonica Group]
Length = 787
Score = 60.8 bits (146), Expect(2) = 2e-17
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +1
Query: 16 PNLQSKRAGFLL----GKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHW 183
PNL R L+ G KAPG DG PA FFQ+ W + ++ + VKE FN G P+
Sbjct: 289 PNLDHSRVTTLIQEKIGPLKAPGPDGFPARFFQRNWGLLKEEVVKAVKEFFNTGVMPAGV 348
Query: 184 NKTIVSLIPKTE 219
N+T + LIPK +
Sbjct: 349 NETAIVLIPKVD 360
Score = 53.9 bits (128), Expect(2) = 2e-17
Identities = 22/56 (39%), Positives = 38/56 (67%)
Frame = +3
Query: 222 PTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
P +RPIS+CN +YK+++ +V+R++ ++ +L+S +Q AF+ GR I DN A
Sbjct: 362 PIELRDYRPISLCNVLYKVVSKCLVNRLRPILDELISPNQSAFVPGRMITDNALIA 417
>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
Length = 633
Score = 59.7 bits (143), Expect(2) = 3e-17
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +1
Query: 43 FLLGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIPKTE 219
F +G KAPG DG P F+Q+ W+ + + R V+E F+ G PS N+T + LIPKTE
Sbjct: 517 FQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLIPKTE 575
Score = 54.3 bits (129), Expect(2) = 3e-17
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = +3
Query: 222 PTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
P + FRPIS+CN +YK+++ +V+R++ ++ LVS +Q AF+ GR I +N A
Sbjct: 577 PQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLVSQNQRAFVPGRLITNNAVIA 632
>ref|XP_002451844.1| hypothetical protein SORBIDRAFT_04g008547 [Sorghum bicolor]
gi|241931675|gb|EES04820.1| hypothetical protein
SORBIDRAFT_04g008547 [Sorghum bicolor]
Length = 599
Score = 58.2 bits (139), Expect(2) = 3e-17
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +1
Query: 13 KPNLQSKRAGFLLGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKT 192
+ +L+ +RA F++G NKAPG DG A F+Q W +G + + V N G P N+T
Sbjct: 448 RDSLEVERALFMMGANKAPGPDGFTAGFYQNHWDVVGPSITKAVIHFLNGGHMPEGINQT 507
Query: 193 IVSLIPKTE 219
+ LIPK +
Sbjct: 508 TIVLIPKVK 516
Score = 55.8 bits (133), Expect(2) = 3e-17
Identities = 23/57 (40%), Positives = 39/57 (68%)
Frame = +3
Query: 219 NPTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
+P ++FRPIS+CN IYK+ + V+ +R++ + +++S Q AF+ GR I DN+ A
Sbjct: 517 HPQDLKNFRPISLCNVIYKICSKVLANRLRVFLDEIISEEQSAFVPGRLITDNVLVA 573
>ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group]
gi|255677700|dbj|BAH93889.1| Os07g0417700 [Oryza sativa
Japonica Group]
Length = 1011
Score = 57.0 bits (136), Expect(2) = 3e-17
Identities = 25/56 (44%), Positives = 38/56 (67%)
Frame = +3
Query: 222 PTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
P + FRPIS+CN +YK ++ +V+R++ ++ +LVS SQ AF+ GR I DN A
Sbjct: 190 PMEVKDFRPISLCNVLYKFVSKCLVNRLRPILDELVSQSQSAFVPGRLITDNAILA 245
Score = 56.6 bits (135), Expect(2) = 3e-17
Identities = 28/61 (45%), Positives = 35/61 (57%)
Frame = +1
Query: 37 AGFLLGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIPKT 216
A F +G KAPG DG PA F+++ W + + RVVK F G PS N T + LIPK
Sbjct: 128 AVFQIGPLKAPGPDGFPARFYERNWGVLKEDIVRVVKTFFLTGVMPSGVNNTAIVLIPKI 187
Query: 217 E 219
E
Sbjct: 188 E 188
>ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786154 [Setaria italica]
Length = 720
Score = 56.6 bits (135), Expect(2) = 6e-17
Identities = 25/57 (43%), Positives = 39/57 (68%)
Frame = +3
Query: 219 NPTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
NP + RPIS+CN IYK+ + V+ +R+K ++ +++S +Q AF+ GR I DNI A
Sbjct: 506 NPERLKDLRPISLCNVIYKITSKVLSNRLKLILPEIISQNQSAFVPGRLISDNILIA 562
Score = 56.2 bits (134), Expect(2) = 6e-17
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +1
Query: 49 LGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIPKTE 219
+G KAPG DG+ + F+++ W+ +G + R V N G P+ WN+T+V LIPK +
Sbjct: 449 IGDLKAPGADGMSSLFYKKHWNIVGADVVREVLNFLNDGSMPAKWNETVVVLIPKVQ 505
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 57.4 bits (137), Expect(2) = 8e-17
Identities = 23/57 (40%), Positives = 41/57 (71%)
Frame = +3
Query: 219 NPTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
NPT T FRPIS NT+YK++A ++ R++++++ ++S +Q AF+ GR + +N+ A
Sbjct: 516 NPTCTSDFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLA 572
Score = 55.1 bits (131), Expect(2) = 8e-17
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = +1
Query: 19 NLQSKRAGFLLGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIV 198
N + A F L +NK+ G DG AEFF +WS +G ++ +KE F+ G WN T +
Sbjct: 449 NEDIRAALFSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTI 508
Query: 199 SLIPK 213
LIPK
Sbjct: 509 VLIPK 513
>gb|EEE66361.1| hypothetical protein OsJ_22664 [Oryza sativa Japonica Group]
Length = 267
Score = 56.2 bits (134), Expect(2) = 8e-17
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +1
Query: 43 FLLGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIPKTE 219
F +G KAPG DG P F+Q+ W+TI + VKE F+ G P N+T + LIPK +
Sbjct: 105 FQIGPLKAPGPDGFPVRFYQRNWATIKSDVVAAVKEFFHSGIMPEGANETAIVLIPKID 163
Score = 56.2 bits (134), Expect(2) = 8e-17
Identities = 23/56 (41%), Positives = 39/56 (69%)
Frame = +3
Query: 222 PTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
P + FRPIS+CN +YK+++ +V+R++ ++ +L+S +Q AF+ GR I DN A
Sbjct: 165 PVELKDFRPISLCNVLYKIVSKCLVNRLRSILDELISVNQSAFVPGRLITDNALLA 220
>gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japonica Group]
Length = 469
Score = 56.2 bits (134), Expect(2) = 1e-16
Identities = 24/56 (42%), Positives = 38/56 (67%)
Frame = +3
Query: 222 PTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
P + FRPIS+CN IYK+++ +V+R++ ++ L+S +Q AF+ GR I DN A
Sbjct: 181 PMELKEFRPISLCNVIYKIVSKCLVNRLRPILDDLISQNQSAFVPGRMITDNALLA 236
Score = 55.8 bits (133), Expect(2) = 1e-16
Identities = 27/57 (47%), Positives = 33/57 (57%)
Frame = +1
Query: 43 FLLGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIPK 213
F +G KAPG DG PA F+Q+ W I + R VKE F+ G P N T + LIPK
Sbjct: 121 FQIGPLKAPGPDGFPARFYQRNWGLIKSDVVRAVKEFFHTGIMPDGINATAIVLIPK 177
>gb|EAZ08016.1| hypothetical protein OsI_30282 [Oryza sativa Indica Group]
Length = 632
Score = 56.6 bits (135), Expect(2) = 1e-16
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +1
Query: 49 LGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIPK 213
+G KAPG DG+PA F++ W T+G + + VK + +HWN+T+V LIPK
Sbjct: 1 MGDLKAPGSDGMPALFYKNFWGTVGLDVGKEVKSLLIGSEMSAHWNETVVVLIPK 55
Score = 55.1 bits (131), Expect(2) = 1e-16
Identities = 22/57 (38%), Positives = 40/57 (70%)
Frame = +3
Query: 219 NPTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
NP + RPIS+C+ +YK+ + V+ +R+K+++ +++S +Q AF+ GR I DN+ A
Sbjct: 58 NPERLKDLRPISLCSIVYKIASKVVANRLKRILPEIISLNQSAFVPGRMITDNVLLA 114
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 60.8 bits (146), Expect(2) = 2e-16
Identities = 26/50 (52%), Positives = 38/50 (76%)
Frame = +3
Query: 240 FRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
FRPIS+CN IYK++ +M +R+K+++ L+S +Q AF+KGR I DNI A
Sbjct: 504 FRPISLCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIA 553
Score = 50.4 bits (119), Expect(2) = 2e-16
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +1
Query: 31 KRAGFLLGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIP 210
+RA F + +K PG DG+ +QQ W T+G Q+ +V+ F G NKT + LIP
Sbjct: 434 QRATFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLIP 493
Query: 211 K 213
K
Sbjct: 494 K 494
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 60.1 bits (144), Expect(2) = 2e-16
Identities = 30/63 (47%), Positives = 38/63 (60%)
Frame = +1
Query: 31 KRAGFLLGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIP 210
K A F + APG DG+ A FFQ WST+G Q+ VK+ F G P+ WN T + LIP
Sbjct: 397 KEAVFSIKPASAPGPDGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIP 456
Query: 211 KTE 219
KT+
Sbjct: 457 KTQ 459
Score = 50.8 bits (120), Expect(2) = 2e-16
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +3
Query: 219 NPTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
+PT RPIS+C+ +YK+++ +M R++ + ++VS +Q AF+ R I DNI A
Sbjct: 460 HPTEMVDLRPISLCSVLYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVA 516
>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 60.1 bits (144), Expect(2) = 2e-16
Identities = 30/63 (47%), Positives = 38/63 (60%)
Frame = +1
Query: 31 KRAGFLLGKNKAPGIDGIPAEFFQQTWSTIGYQLYRVVKECFNQGKFPSHWNKTIVSLIP 210
K A F + APG DG+ A FFQ WST+G Q+ VK+ F G P+ WN T + LIP
Sbjct: 400 KEAVFSIKPASAPGPDGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIP 459
Query: 211 KTE 219
KT+
Sbjct: 460 KTQ 462
Score = 50.8 bits (120), Expect(2) = 2e-16
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +3
Query: 219 NPTITEHFRPISVCNTIYKLLATVMVSRIKQVITKLVSGSQYAFIKGRFIVDNITCA 389
+PT RPIS+C+ +YK+++ +M R++ + ++VS +Q AF+ R I DNI A
Sbjct: 463 HPTEMVDLRPISLCSVLYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVA 519