BLASTX nr result

ID: Stemona21_contig00040171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00040171
         (285 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW25446.1| hypothetical protein PHAVU_003G036500g [Phaseolus...    59   5e-07
ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_006844767.1| hypothetical protein AMTR_s00016p00258280 [A...    57   3e-06

>gb|ESW25446.1| hypothetical protein PHAVU_003G036500g [Phaseolus vulgaris]
          Length = 593

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = +3

Query: 3   ALSSALRARRPDLLRSFYDLMLRSXXXXXXXXXXXX--IRSLCLENRLLEAYTLVRDLLS 176
           +L S LRA R +L+ + Y+ M+ S              I + C EN++L+ Y L+R+LL 
Sbjct: 184 SLLSCLRAGRTNLVWTLYEQMMESGVVASINVETVGYLIMTFCAENKVLKGYELLRELLE 243

Query: 177 GGTLIPDMAALTCLVASFAQDGNFGIVSELLHLMIA 284
            G L PD    T L+  F ++  +  VSE+LH+MIA
Sbjct: 244 NG-LHPDNVVFTALIRGFCKERQYARVSEILHIMIA 278


>ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like isoform X1 [Glycine max]
           gi|571466579|ref|XP_006583703.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g18950-like isoform X2 [Glycine max]
          Length = 577

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
 Frame = +3

Query: 3   ALSSALRARRPDLLRSFYDLMLRSXXXXXXXXXXXX--IRSLCLENRLLEAYTLVRDLLS 176
           +L   LRARR DL+ + Y+ M+ S              I + C E ++L+ Y L+++LL 
Sbjct: 183 SLLGCLRARRTDLVWTLYEQMMESGVVASINVETVGYLIMAFCAEYKVLKGYELLKELLE 242

Query: 177 GGTLIPDMAALTCLVASFAQDGNFGIVSELLHLMIA 284
            G L PD      L+  F ++G +  VSE+LH+MIA
Sbjct: 243 NG-LCPDNVVFNELIRGFCKEGQYDRVSEILHIMIA 277


>ref|XP_006844767.1| hypothetical protein AMTR_s00016p00258280 [Amborella trichopoda]
           gi|548847238|gb|ERN06442.1| hypothetical protein
           AMTR_s00016p00258280 [Amborella trichopoda]
          Length = 696

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/89 (38%), Positives = 47/89 (52%)
 Frame = +3

Query: 18  LRARRPDLLRSFYDLMLRSXXXXXXXXXXXXIRSLCLENRLLEAYTLVRDLLSGGTLIPD 197
           LR  R D L   Y  M+ S            IR+ C E +  EAY L+++ +S G  +PD
Sbjct: 294 LRDLRTDRLWEIYGEMMESGVAGDATTYGYLIRAFCQEKKWDEAYNLLQEAVSNG-FVPD 352

Query: 198 MAALTCLVASFAQDGNFGIVSELLHLMIA 284
           +   T LV  F+ + ++  VSELLHLMIA
Sbjct: 353 VVTFTKLVCRFSGENSYDKVSELLHLMIA 381


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