BLASTX nr result
ID: Stemona21_contig00040113
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00040113
(314 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japo... 67 2e-09
ref|NP_001064277.2| Os10g0191000 [Oryza sativa Japonica Group] g... 67 2e-09
gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japo... 67 2e-09
gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indi... 67 2e-09
ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786... 63 7e-09
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo... 64 2e-08
ref|XP_002452318.1| hypothetical protein SORBIDRAFT_04g023610 [S... 55 3e-08
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S... 64 3e-08
gb|ABA97563.1| retrotransposon protein, putative, unclassified [... 63 5e-08
gb|ABF97084.1| retrotransposon protein, putative, unclassified [... 63 5e-08
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ... 63 5e-08
pir||S65817 RNA-directed DNA polymerase (EC 2.7.7.49) (clone B3)... 62 6e-08
gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [... 62 6e-08
gb|AAB48348.1| reverse transcriptase, partial [Arabidopsis thali... 62 6e-08
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 55 7e-08
gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [... 62 8e-08
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 62 8e-08
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 62 1e-07
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 62 1e-07
ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756... 61 1e-07
>gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 566
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = +2
Query: 107 PSSC*GLQAYTVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQEAS 286
PS L+ ++CN +YKII+ +LANRLKS LP++I Q+AFV GRLITDN+L A EA+
Sbjct: 19 PSVLKELRPSSLCNVVYKIISKVLANRLKSILPEIILDTQSAFVPGRLITDNVLIAYEAT 78
>ref|NP_001064277.2| Os10g0191000 [Oryza sativa Japonica Group]
gi|255679263|dbj|BAF26191.2| Os10g0191000 [Oryza sativa
Japonica Group]
Length = 527
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = +2
Query: 107 PSSC*GLQAYTVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQEAS 286
PS L+ ++CN +YKII+ +LANRLKS LP++I Q+AFV GRLITDN+L A EA+
Sbjct: 19 PSVLKELRPSSLCNVVYKIISKVLANRLKSILPEIILDTQSAFVPGRLITDNVLIAYEAT 78
>gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japonica Group]
Length = 697
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = +2
Query: 107 PSSC*GLQAYTVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQEAS 286
PS L+ ++CN +YKII+ +LANRLKS LP++I Q+AFV GRLITDN+L A EA+
Sbjct: 19 PSVLKELRPSSLCNVVYKIISKVLANRLKSILPEIILDTQSAFVPGRLITDNVLIAYEAT 78
>gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indica Group]
Length = 697
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = +2
Query: 107 PSSC*GLQAYTVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQEAS 286
PS L+ ++CN +YKII+ +LANRLKS LP++I Q+AFV GRLITDN+L A EA+
Sbjct: 19 PSVLKELRPSSLCNVVYKIISKVLANRLKSILPEIILDTQSAFVPGRLITDNVLIAYEAT 78
>ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786154 [Setaria italica]
Length = 720
Score = 62.8 bits (151), Expect(2) = 7e-09
Identities = 30/52 (57%), Positives = 41/52 (78%)
Frame = +2
Query: 125 LQAYTVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQE 280
L+ ++CN IYKI + +L+NRLK LP++I +NQ+AFV GRLI+DNIL A E
Sbjct: 513 LRPISLCNVIYKITSKVLSNRLKLILPEIISQNQSAFVPGRLISDNILIAYE 564
Score = 22.7 bits (47), Expect(2) = 7e-09
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +1
Query: 10 GPSIHLAISQFFESDTFPASWNKTV 84
G + + F + PA WN+TV
Sbjct: 473 GADVVREVLNFLNDGSMPAKWNETV 497
>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
Length = 662
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/59 (50%), Positives = 44/59 (74%)
Frame = +2
Query: 104 QPSSC*GLQAYTVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQE 280
+P + L+ ++CN +YKI++ +LANRLK+ LP++I Q+AFV GRLI+DNIL A E
Sbjct: 191 KPENIKDLRPISLCNVLYKIVSKVLANRLKTILPEVISPTQSAFVPGRLISDNILVAYE 249
>ref|XP_002452318.1| hypothetical protein SORBIDRAFT_04g023610 [Sorghum bicolor]
gi|241932149|gb|EES05294.1| hypothetical protein
SORBIDRAFT_04g023610 [Sorghum bicolor]
Length = 701
Score = 55.1 bits (131), Expect(2) = 3e-08
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +2
Query: 137 TVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQE 280
++CN YKIIA LA+R+++ LP +I +QTAFV GR I NI+ AQE
Sbjct: 79 SLCNVAYKIIAKSLADRIRNHLPHIIHPSQTAFVQGRYIASNIIIAQE 126
Score = 28.5 bits (62), Expect(2) = 3e-08
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 54 HLPCFLEQNGITLIPKDN-PLHVEDFRPI 137
+LP + ITLIPK N PL +D+RPI
Sbjct: 50 YLPAEINYTHITLIPKINAPLTPKDYRPI 78
>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
gi|241926916|gb|EES00061.1| hypothetical protein
SORBIDRAFT_03g001780 [Sorghum bicolor]
Length = 631
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/52 (55%), Positives = 40/52 (76%)
Frame = +2
Query: 125 LQAYTVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQE 280
L+ ++CN +YK+I+ +LANRLK LP +I +Q+AFV GRLITDN+L A E
Sbjct: 85 LRPISLCNVLYKLISKVLANRLKKILPNIISNSQSAFVPGRLITDNVLLAYE 136
>gb|ABA97563.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 839
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/52 (55%), Positives = 41/52 (78%)
Frame = +2
Query: 125 LQAYTVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQE 280
L+ +VCN +YKI++ +LANRLK LP++I ++Q+AF GRLI+DNIL A E
Sbjct: 382 LRPISVCNVLYKIVSKVLANRLKKILPEVISQSQSAFFPGRLISDNILVAYE 433
>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1184
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +2
Query: 137 TVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQE 280
++CN +YKII+ +LANRLK LP++I Q+AFV GRLITDN+L A E
Sbjct: 371 SLCNVVYKIISKMLANRLKCLLPEIISDQQSAFVPGRLITDNVLVAYE 418
>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1185
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +2
Query: 137 TVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQE 280
++CN +YKII+ +LANRLK LP++I Q+AFV GRLITDN+L A E
Sbjct: 371 SLCNVVYKIISKMLANRLKCLLPEIISDQQSAFVPGRLITDNVLVAYE 418
>pir||S65817 RNA-directed DNA polymerase (EC 2.7.7.49) (clone B3) - Arabidopsis
thaliana retrotransposon Ta25 (fragment)
Length = 184
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +2
Query: 137 TVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQE 280
++CN YK+I+ +L++RLK LP LI + Q+AFV+GRLITDNIL AQE
Sbjct: 58 SLCNVSYKVISKVLSSRLKKILPDLISETQSAFVAGRLITDNILVAQE 105
>gb|EMJ08780.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
Length = 1146
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +2
Query: 104 QPSSC*GLQAYTVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQEA 283
+P+S + ++CN+ YKI++ +LANRLK+ LP LI ++Q AFV GR I DNIL A EA
Sbjct: 408 KPTSVNHFRPISLCNNSYKILSKLLANRLKTLLPMLISQHQNAFVPGRQIQDNILLAHEA 467
>gb|AAB48348.1| reverse transcriptase, partial [Arabidopsis thaliana]
Length = 199
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +2
Query: 137 TVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQE 280
++CN YK+I+ +L++RLK LP LI + Q+AFV+GRLITDNIL AQE
Sbjct: 64 SLCNVSYKVISKVLSSRLKKILPDLISETQSAFVAGRLITDNILVAQE 111
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 55.5 bits (132), Expect(2) = 7e-08
Identities = 25/46 (54%), Positives = 36/46 (78%)
Frame = +2
Query: 143 CNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQE 280
CN+IYK+I+ +LA RL++ LP I +Q+AFV GRL+T+N+L A E
Sbjct: 528 CNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATE 573
Score = 26.6 bits (57), Expect(2) = 7e-08
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 10 GPSIHLAISQFFESDTFPASWNKT 81
GPS+ A+ +FF S WN T
Sbjct: 482 GPSLIAAVQEFFRSGRLLGQWNST 505
>gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [Prunus persica]
Length = 851
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = +2
Query: 104 QPSSC*GLQAYTVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQEA 283
+P+S + ++CN+ YKI++ +LANRLK+ LP LI ++Q AF+ GR I DNIL A EA
Sbjct: 104 KPTSVNHFRPISLCNNSYKILSKLLANRLKTLLPMLISQHQNAFIPGRQIQDNILLAHEA 163
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +2
Query: 137 TVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQE 280
++CN IYK+I ++ANRLK LP LI + Q AFV GRLI+DNIL A E
Sbjct: 508 SLCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHE 555
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/59 (52%), Positives = 42/59 (71%)
Frame = +2
Query: 104 QPSSC*GLQAYTVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQE 280
+P+ L+ ++CN YK+I+ IL RLK+ LP LI + Q+AFV GRLI+DNIL AQE
Sbjct: 281 RPTRMTELRPISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQE 339
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/48 (56%), Positives = 41/48 (85%)
Frame = +2
Query: 137 TVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQE 280
++CN +YK+++ +LANRLKS LP++I +NQ+AF+S R+I DNI+AA E
Sbjct: 796 SLCNVVYKLVSKVLANRLKSVLPEVIAENQSAFMSQRIIHDNIIAAFE 843
>ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756955 [Setaria italica]
Length = 1203
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +2
Query: 137 TVCNSIYKIIASILANRLKSKLPKLIPKNQTAFVSGRLITDNILAAQE 280
++CN +YKII+ +LA RLK+ LP++I +Q+AFV GRLITDNIL A E
Sbjct: 412 SLCNVVYKIISKMLAQRLKAFLPEIIDDHQSAFVPGRLITDNILLAYE 459