BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00040053
         (263 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001173078.1| Os02g0616666 [Oryza sativa Japonica Group] g...    52   2e-07
gb|EMS50149.1| Retrovirus-related Pol polyprotein from transposo...    55   7e-06

>ref|NP_001173078.1| Os02g0616666 [Oryza sativa Japonica Group]
           gi|255671092|dbj|BAH91807.1| Os02g0616666 [Oryza sativa
           Japonica Group]
          Length = 1228

 Score = 52.0 bits (123), Expect(2) = 2e-07
 Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = +1

Query: 1   TWILDSGASHHLTVDSSILGSFAISPS-IKLQTADGSSLPITSHDNLSPSSDVSGRFTVP 177
           +W LDSGAS H+T DS+ L S +   + + +QTA+G+SLP+     LS SS     F VP
Sbjct: 237 SWFLDSGASFHMTPDSTHLSSMSPPDTPLTVQTANGTSLPVVDRGTLSTSS-----FRVP 291

Query: 178 RVFHSP 195
            V H P
Sbjct: 292 TVSHVP 297



 Score = 28.9 bits (63), Expect(2) = 2e-07
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 185 STLPSVTVNLFSVSQITDHHCTVTFD 262
           S +P +T+ L S  QITDH C +  +
Sbjct: 294 SHVPKLTMQLMSAGQITDHGCRIILE 319


>gb|EMS50149.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Triticum urartu]
          Length = 2747

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = +1

Query: 4   WILDSGASHHLTVDSSILGSF-AISPSIKLQTADGSSLPITSHDNLSPSSDVSGRFTVPR 180
           WILD+GAS H+T DSS L S   +   + + TADG+SLP+T    LS SS     F VP 
Sbjct: 386 WILDTGASFHMTHDSSTLSSTRPLDSPVHVLTADGTSLPVTGRGTLSTSS-----FHVPD 440

Query: 181 VFHSPFCYCELI 216
           V H P    +LI
Sbjct: 441 VAHVPRLTMQLI 452