BLASTX nr result
ID: Stemona21_contig00039041
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00039041
(376 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521433.1| XPA-binding protein, putative [Ricinus commu... 60 3e-07
ref|XP_003635315.1| PREDICTED: pre-mRNA-splicing factor syf1-lik... 57 3e-06
ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago trun... 57 3e-06
emb|CBI23476.3| unnamed protein product [Vitis vinifera] 57 3e-06
emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera] 57 3e-06
ref|XP_006828554.1| hypothetical protein AMTR_s00060p00216060 [A... 57 3e-06
ref|XP_006827102.1| hypothetical protein AMTR_s00010p00243220 [A... 57 3e-06
gb|EMJ12547.1| hypothetical protein PRUPE_ppa001514mg [Prunus pe... 57 3e-06
ref|XP_004229617.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik... 57 3e-06
ref|XP_006658042.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik... 56 4e-06
ref|XP_004958506.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik... 56 4e-06
ref|NP_001060448.1| Os07g0644300 [Oryza sativa Japonica Group] g... 56 4e-06
ref|XP_002463280.1| hypothetical protein SORBIDRAFT_02g041110 [S... 56 4e-06
gb|EEC82544.1| hypothetical protein OsI_27077 [Oryza sativa Indi... 56 4e-06
gb|EAZ40851.1| hypothetical protein OsJ_25330 [Oryza sativa Japo... 56 4e-06
ref|XP_006828557.1| hypothetical protein AMTR_s00060p00217030 [A... 56 6e-06
ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik... 56 6e-06
ref|XP_006594623.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik... 56 6e-06
ref|XP_002305003.1| transcription-coupled DNA repair family prot... 56 6e-06
ref|XP_006345465.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik... 55 7e-06
>ref|XP_002521433.1| XPA-binding protein, putative [Ricinus communis]
gi|223539332|gb|EEF40923.1| XPA-binding protein,
putative [Ricinus communis]
Length = 916
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/47 (59%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Frame = +3
Query: 153 FLQTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
+ QTHFILPEYLM+KDQ+ N++E D +++A VP EMA L+RQL P
Sbjct: 763 YSQTHFILPEYLMQKDQRLNIDEAKDKLKLAGVPEDEMAALERQLAP 809
>ref|XP_003635315.1| PREDICTED: pre-mRNA-splicing factor syf1-like [Vitis vinifera]
Length = 816
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/47 (59%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +3
Query: 153 FLQTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
+ QTHF+LPEYLM+KD K N++E D ++ A VP EMA L+RQLVP
Sbjct: 663 YSQTHFLLPEYLMQKDPKLNLDEAMDTLKQAGVPEDEMAALERQLVP 709
>ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago truncatula]
gi|355482496|gb|AES63699.1| Pre-mRNA-splicing factor
SYF1 [Medicago truncatula]
Length = 925
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +3
Query: 153 FLQTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
+ QTHFILPEYLM+KDQ N+EE D ++ A +P EMA L+RQL P
Sbjct: 778 YSQTHFILPEYLMQKDQTVNLEEAKDKLKEAGIPEDEMAALERQLAP 824
>emb|CBI23476.3| unnamed protein product [Vitis vinifera]
Length = 914
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/47 (59%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +3
Query: 153 FLQTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
+ QTHF+LPEYLM+KD K N++E D ++ A VP EMA L+RQLVP
Sbjct: 761 YSQTHFLLPEYLMQKDPKLNLDEAMDTLKQAGVPEDEMAALERQLVP 807
>emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]
Length = 920
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/47 (59%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +3
Query: 153 FLQTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
+ QTHF+LPEYLM+KD K N++E D ++ A VP EMA L+RQLVP
Sbjct: 765 YSQTHFLLPEYLMQKDPKLNLDEAMDTLKQAGVPEDEMAALERQLVP 811
>ref|XP_006828554.1| hypothetical protein AMTR_s00060p00216060 [Amborella trichopoda]
gi|548833302|gb|ERM95970.1| hypothetical protein
AMTR_s00060p00216060 [Amborella trichopoda]
Length = 929
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +3
Query: 153 FLQTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
+ QTHFILPEYLM+KDQK +EE D ++ A VP EMA L+RQL P
Sbjct: 776 YSQTHFILPEYLMQKDQKLVLEETVDTLKRAGVPEDEMAVLERQLAP 822
>ref|XP_006827102.1| hypothetical protein AMTR_s00010p00243220 [Amborella trichopoda]
gi|548831531|gb|ERM94339.1| hypothetical protein
AMTR_s00010p00243220 [Amborella trichopoda]
Length = 929
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +3
Query: 153 FLQTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
+ QTHFILPEYLM+KDQK +EE D ++ A VP EMA L+RQL P
Sbjct: 776 YSQTHFILPEYLMQKDQKLVLEETVDTLKRAGVPEDEMAVLERQLAP 822
>gb|EMJ12547.1| hypothetical protein PRUPE_ppa001514mg [Prunus persica]
Length = 811
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +3
Query: 153 FLQTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
+ QTHFILPEY+M+KDQ+ N++E D ++ A VP EMA L+RQL P
Sbjct: 659 YSQTHFILPEYMMQKDQRLNMDEAKDKLKQAGVPEDEMAALERQLAP 705
>ref|XP_004229617.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Solanum
lycopersicum]
Length = 916
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +3
Query: 153 FLQTHFILPEYLMEKDQKQNVEEVADV-QIARVPAKEMATLQRQLVP 290
+ QTHFILPEYLM+KDQ Q +EE DV + A + EMA L+RQLVP
Sbjct: 765 YSQTHFILPEYLMQKDQMQTLEEAKDVLKKAGIADDEMAALERQLVP 811
>ref|XP_006658042.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Oryza brachyantha]
Length = 924
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/45 (60%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 159 QTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
QTHFILPEYLM++DQ+ N++E D ++ A VP EMA L+RQL P
Sbjct: 776 QTHFILPEYLMQRDQRLNLDEAVDTLKRAGVPEDEMAALERQLAP 820
>ref|XP_004958506.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Setaria italica]
Length = 928
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/45 (60%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 159 QTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
QTHFILPEYLM++DQ+ N++E D ++ A VP EMA L+RQL P
Sbjct: 780 QTHFILPEYLMQRDQRLNLDEAVDTLKRAGVPEDEMAALERQLAP 824
>ref|NP_001060448.1| Os07g0644300 [Oryza sativa Japonica Group]
gi|22093713|dbj|BAC07006.1| putative adapter protein
ATH-55 [Oryza sativa Japonica Group]
gi|50509940|dbj|BAD30261.1| putative adapter protein
ATH-55 [Oryza sativa Japonica Group]
gi|113611984|dbj|BAF22362.1| Os07g0644300 [Oryza sativa
Japonica Group] gi|215694910|dbj|BAG90101.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215715331|dbj|BAG95082.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 931
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/45 (60%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 159 QTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
QTHFILPEYLM++DQ+ N++E D ++ A VP EMA L+RQL P
Sbjct: 779 QTHFILPEYLMQRDQRLNLDEAVDTLKRAGVPEDEMANLERQLAP 823
>ref|XP_002463280.1| hypothetical protein SORBIDRAFT_02g041110 [Sorghum bicolor]
gi|241926657|gb|EER99801.1| hypothetical protein
SORBIDRAFT_02g041110 [Sorghum bicolor]
Length = 932
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/45 (60%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 159 QTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
QTHFILPEYLM++DQ+ N++E D ++ A VP EMA L+RQL P
Sbjct: 780 QTHFILPEYLMQRDQRLNLDEAVDTLKRAGVPEDEMAALERQLAP 824
>gb|EEC82544.1| hypothetical protein OsI_27077 [Oryza sativa Indica Group]
Length = 1091
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/45 (60%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 159 QTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
QTHFILPEYLM++DQ+ N++E D ++ A VP EMA L+RQL P
Sbjct: 939 QTHFILPEYLMQRDQRLNLDEAVDTLKRAGVPEDEMANLERQLAP 983
>gb|EAZ40851.1| hypothetical protein OsJ_25330 [Oryza sativa Japonica Group]
Length = 862
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/45 (60%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +3
Query: 159 QTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
QTHFILPEYLM++DQ+ N++E D ++ A VP EMA L+RQL P
Sbjct: 710 QTHFILPEYLMQRDQRLNLDEAVDTLKRAGVPEDEMANLERQLAP 754
>ref|XP_006828557.1| hypothetical protein AMTR_s00060p00217030 [Amborella trichopoda]
gi|548833305|gb|ERM95973.1| hypothetical protein
AMTR_s00060p00217030 [Amborella trichopoda]
Length = 170
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +3
Query: 138 YLFWIFLQTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
Y F + THFILPEYLM+KDQK +EE D ++ A VP EMA L+RQL P
Sbjct: 85 YFFPLKAFTHFILPEYLMQKDQKLILEETVDTLKRAGVPEDEMAVLERQLAP 136
>ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max]
Length = 918
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/47 (57%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +3
Query: 153 FLQTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
+ QTHFILPEYLM+KDQ N++E D ++ A +P EMA L+RQL P
Sbjct: 770 YSQTHFILPEYLMQKDQTVNLDEAKDKLKQAGIPEDEMAALERQLAP 816
>ref|XP_006594623.1| PREDICTED: pre-mRNA-splicing factor SYF1-like isoform X1 [Glycine
max]
Length = 919
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/47 (57%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +3
Query: 153 FLQTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
+ QTHFILPEYLM+KDQ N++E D ++ A +P EMA L+RQL P
Sbjct: 770 YSQTHFILPEYLMQKDQTVNLDEAKDKLKQAGIPEDEMAALERQLAP 816
>ref|XP_002305003.1| transcription-coupled DNA repair family protein [Populus
trichocarpa] gi|222847967|gb|EEE85514.1|
transcription-coupled DNA repair family protein [Populus
trichocarpa]
Length = 908
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/47 (55%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +3
Query: 153 FLQTHFILPEYLMEKDQKQNVEEVAD-VQIARVPAKEMATLQRQLVP 290
+ QTHFILPEYLM+KDQ+ N+++ D ++ A +P EMA L+RQL P
Sbjct: 763 YSQTHFILPEYLMQKDQRLNIDDAKDKLKQAGLPEDEMAALERQLAP 809
>ref|XP_006345465.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Solanum tuberosum]
Length = 915
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +3
Query: 153 FLQTHFILPEYLMEKDQKQNVEEVADV-QIARVPAKEMATLQRQLVP 290
+ QTHFILPEYLM+KDQ Q +EE DV + A V EMA L+RQL P
Sbjct: 764 YSQTHFILPEYLMQKDQMQTLEEAKDVLKKAGVADDEMAALERQLAP 810