BLASTX nr result

ID: Stemona21_contig00033574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00033574
         (541 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599188.1| F-box protein [Medicago truncatula] gi|35548...    57   4e-06
ref|XP_003622970.1| Pantothenate synthetase [Medicago truncatula...    56   6e-06
ref|XP_003628018.1| hypothetical protein MTR_8g041480 [Medicago ...    55   8e-06

>ref|XP_003599188.1| F-box protein [Medicago truncatula] gi|355488236|gb|AES69439.1| F-box
            protein [Medicago truncatula]
          Length = 969

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 36/91 (39%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
 Frame = -3

Query: 275  RRVMVSRTCVLCKSKDETTKHLFLRCPSVRSFWAHARFLFSFK-GRPGGLRSWFGCW--- 108
            RRV  SR CVLC+  +ETT HLFL C  V   W     +  F    P  L S F  W   
Sbjct: 834  RRVEESRNCVLCRRVEETTLHLFLHCEVVLKVWQRVMSVLHFHFVIPHNLFSHFEWWYYE 893

Query: 107  TDARVSRRGSFRLWCQVFAWEIWKERNTRIF 15
              +   RR  F +W     W IWK++N  IF
Sbjct: 894  APSLKMRRVFFLIWLDSI-WVIWKKKNEVIF 923


>ref|XP_003622970.1| Pantothenate synthetase [Medicago truncatula]
           gi|355497985|gb|AES79188.1| Pantothenate synthetase
           [Medicago truncatula]
          Length = 551

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/85 (36%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
 Frame = -3

Query: 263 VSRTCVLCKSKDETTKHLFLRCPSVRSFWAHARFLFSFKGRPGGLRSWFGCWTDARVSRR 84
           V  TCVLC  ++E++ HLFL C      W            P  L   F  W     S+R
Sbjct: 291 VPLTCVLCGQREESSTHLFLHCEVAAKIWRGVLNWLDMFITPQNLYVHFESWNGEATSKR 350

Query: 83  --GSFRLWCQVFAWEIWKERNTRIF 15
               FRL      W IWKERN +IF
Sbjct: 351 LLKGFRLIWHATIWLIWKERNAKIF 375


>ref|XP_003628018.1| hypothetical protein MTR_8g041480 [Medicago truncatula]
           gi|355522040|gb|AET02494.1| hypothetical protein
           MTR_8g041480 [Medicago truncatula]
          Length = 491

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
 Frame = -3

Query: 260 SRTCVLCKSKDETTKHLFLRCPSVRSFWAHARFLFSFK-GRPGGLRSWFGCWTD---ARV 93
           SR CV C +  E+T HLFL C  +   W       +F    P  L     CWT    ++ 
Sbjct: 121 SRRCVFCDTHHESTLHLFLHCEIIDKVWREVMRWLNFNLTTPPNLFIHICCWTREVWSKK 180

Query: 92  SRRGSFRLWCQVFAWEIWKERNTRIFVGK 6
            RRG++ +W  V  W +W  RN RIF  K
Sbjct: 181 LRRGAWLIWHAVI-WVVWLARNDRIFNNK 208


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