BLASTX nr result

ID: Stemona21_contig00033313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00033313
         (325 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    90   4e-16
ref|XP_006849874.1| hypothetical protein AMTR_s00022p00074370 [A...    87   2e-15
gb|ESW22392.1| hypothetical protein PHAVU_005G150000g [Phaseolus...    86   4e-15
gb|EXC06141.1| Pre-mRNA-splicing factor ATP-dependent RNA helica...    86   7e-15
ref|XP_004310060.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    84   3e-14
ref|XP_003547002.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    82   6e-14
ref|XP_006364743.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    80   4e-13
ref|XP_004249090.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    80   4e-13
ref|XP_006595050.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    79   5e-13
ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    79   5e-13
ref|XP_004487236.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    78   1e-12
ref|XP_003597474.1| Pre-mRNA-splicing factor ATP-dependent RNA h...    78   1e-12
ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe...    78   1e-12
ref|XP_006484342.1| PREDICTED: mRNA cap guanine-N7 methyltransfe...    71   2e-10
ref|XP_006484072.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...    71   2e-10
ref|XP_006438067.1| hypothetical protein CICLE_v100305311mg, par...    71   2e-10
gb|EMT14441.1| Pre-mRNA-splicing factor ATP-dependent RNA helica...    70   3e-10
ref|NP_001059742.1| Os07g0508000 [Oryza sativa Japonica Group] g...    69   7e-10
ref|XP_002316148.2| hypothetical protein POPTR_0010s17940g [Popu...    69   9e-10
gb|EMS52676.1| Pre-mRNA-splicing factor ATP-dependent RNA helica...    69   9e-10

>ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Cucumis sativus]
          Length = 1298

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 43/90 (47%), Positives = 63/90 (70%)
 Frame = -1

Query: 298 GDDKVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASDDT 119
           G D  IDI+ T+ +LEP+ + +GGL +P K+K ++RPPER+S LGLDVLA+ KRG S+D 
Sbjct: 5   GGDDAIDIDRTTLLLEPENNTEGGLSVPGKDKPVFRPPERRSHLGLDVLANAKRGGSNDN 64

Query: 118 GFKVPIGKPISSVISIDEDEKSSFSMLEDT 29
           GFK+P     S V S++E++    S + D+
Sbjct: 65  GFKIPQQSIASFVSSMEEEDTIESSGVTDS 94


>ref|XP_006849874.1| hypothetical protein AMTR_s00022p00074370 [Amborella trichopoda]
           gi|548853472|gb|ERN11455.1| hypothetical protein
           AMTR_s00022p00074370 [Amborella trichopoda]
          Length = 1340

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 48/101 (47%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = -1

Query: 304 MEGDDKVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPP-ERKSRLGLDVLASTKRGAS 128
           MEG   +  ++ T  VLEPD   KGGL +P K+++++RPP ERKS LGLD LA  K G  
Sbjct: 1   MEG---IAGLDETKDVLEPDKGSKGGLYVPGKDRVIFRPPPERKSILGLDALAIAKGGRK 57

Query: 127 DDTGFKVPIGKPISSVISIDEDEKSSFSMLEDTRIDSHQGE 5
            + GFKVP+ + +SS+ S+D +EKS F   ED   D  Q E
Sbjct: 58  SEHGFKVPMDRIVSSMASLDAEEKSDFQESEDGSSDVPQRE 98


>gb|ESW22392.1| hypothetical protein PHAVU_005G150000g [Phaseolus vulgaris]
          Length = 1272

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 41/88 (46%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = -1

Query: 289 KVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASD-DTGF 113
           +V+DIN T+  LEP+   +GGLC+  K++++Y P ERKSRLGLD LAS KRG +  D GF
Sbjct: 9   EVVDINKTTTTLEPEKPTRGGLCVSGKDRVVYVPQERKSRLGLDALASAKRGGTHYDGGF 68

Query: 112 KVPIGKPISSVISIDEDEKSSFSMLEDT 29
           K+P  + IS   S ++++KS  +++E++
Sbjct: 69  KLPKERTISIAASAEDEDKSESTVVEES 96


>gb|EXC06141.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase [Morus
           notabilis]
          Length = 1302

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 43/101 (42%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
 Frame = -1

Query: 301 EGDDKVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASD- 125
           +G  + ID++ T+  LE + S  GGL +P K++++++PPERKS LGLDVLA+ KRG S  
Sbjct: 5   QGIAETIDLDKTTVTLEAEKSSNGGLYLPGKDRVVFKPPERKSILGLDVLANAKRGESKV 64

Query: 124 DTGFKVPIGKPISSVISIDEDEKSSFSMLEDTRIDSHQGER 2
           D GFKVP  +  S V S++E+E +  ++ ++T  ++  G+R
Sbjct: 65  DGGFKVPRDRVSSLVASMEEEENNGSTVTDETGSNTFSGKR 105


>ref|XP_004310060.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Fragaria vesca subsp. vesca]
          Length = 1307

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 47/102 (46%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
 Frame = -1

Query: 301 EGDDKVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASD- 125
           +G+ + I ++ T+A LEP+ S  GGL +P K++++YRPPERKS LGLDVLA  KR  S  
Sbjct: 4   KGNTEAIKLDKTTATLEPEKSSGGGLFVPGKDRVVYRPPERKSLLGLDVLAIAKREESKA 63

Query: 124 DTGFKVPIGKPISSVISIDEDEKSSFS-MLEDTRIDSHQGER 2
           + GFK P  +  S V S++E+E +S S +++DT  D   G R
Sbjct: 64  EGGFKAPKDRVTSVVASLEEEENNSESGIIDDTGDDISTGVR 105


>ref|XP_003547002.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X1 [Glycine max]
          Length = 1272

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 42/89 (47%), Positives = 60/89 (67%)
 Frame = -1

Query: 286 VIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASDDTGFKV 107
           V+DI+  +A LEP+    GGL +P K++++Y P ERKSRLGLD LAS KR +  D GFKV
Sbjct: 12  VVDIDKITATLEPEKPTSGGLYVPGKDRMVYVPQERKSRLGLDALASAKR-SQHDAGFKV 70

Query: 106 PIGKPISSVISIDEDEKSSFSMLEDTRID 20
           P  + IS   S ++++KS  S+ E++  D
Sbjct: 71  PKERTISIAASAEDEDKSELSVSEESGHD 99


>ref|XP_006364743.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Solanum tuberosum]
          Length = 1285

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = -1

Query: 301 EGDDKVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKR-GASD 125
           +GD   ID++ T+  LEPD +  GGL +P KE+++++P ERKS LGLD LA  KR GA+ 
Sbjct: 3   KGDAGPIDLDKTTTTLEPDKTSSGGLFVPGKERVVFKPSERKSLLGLDALAIAKRGGATV 62

Query: 124 DTGFKVPIGKPISSVISIDEDEKSS 50
           ++ FKVP  +  S   S+DEDE+SS
Sbjct: 63  ESEFKVPRERLASFASSLDEDEESS 87


>ref|XP_004249090.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Solanum lycopersicum]
          Length = 1285

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = -1

Query: 301 EGDDKVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKR-GASD 125
           +GD   ID++ T+  LEPD +  GGL +P KE+++++P ERKS LGLD LA  KR GA+ 
Sbjct: 3   KGDAGPIDLDKTTTTLEPDKTSSGGLFVPGKERVVFKPSERKSLLGLDALAIAKRGGATV 62

Query: 124 DTGFKVPIGKPISSVISIDEDEKSS 50
           ++ FKVP  +  S   S+DEDE+SS
Sbjct: 63  ESEFKVPRERLASIASSLDEDEESS 87


>ref|XP_006595050.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X2 [Glycine max]
           gi|571503064|ref|XP_006595051.1| PREDICTED:
           pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X3 [Glycine max]
          Length = 1271

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 42/89 (47%), Positives = 59/89 (66%)
 Frame = -1

Query: 286 VIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASDDTGFKV 107
           VIDI+ T+  LE +    GGL +P K++++Y P ERKSRLGLD LAS KR +  D GFKV
Sbjct: 10  VIDIDKTTTTLEQEKPTSGGLYVPGKDRVVYVPQERKSRLGLDALASAKR-SQHDVGFKV 68

Query: 106 PIGKPISSVISIDEDEKSSFSMLEDTRID 20
           P  + IS   S ++++KS  S+ E++  D
Sbjct: 69  PKERTISIAASAEDEDKSESSVSEESGHD 97


>ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X1 [Glycine max]
          Length = 1270

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 42/89 (47%), Positives = 59/89 (66%)
 Frame = -1

Query: 286 VIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASDDTGFKV 107
           VIDI+ T+  LE +    GGL +P K++++Y P ERKSRLGLD LAS KR +  D GFKV
Sbjct: 10  VIDIDKTTTTLEQEKPTSGGLYVPGKDRVVYVPQERKSRLGLDALASAKR-SQHDVGFKV 68

Query: 106 PIGKPISSVISIDEDEKSSFSMLEDTRID 20
           P  + IS   S ++++KS  S+ E++  D
Sbjct: 69  PKERTISIAASAEDEDKSESSVSEESGHD 97


>ref|XP_004487236.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Cicer arietinum]
          Length = 1254

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = -1

Query: 289 KVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKR-GASDDTGF 113
           +++D+N T+  LEP+ SI GGL +P K++++Y  PERKSR GLD LA  KR G+  D  F
Sbjct: 9   EIVDVNKTTVTLEPEKSISGGLYVPGKDRVVYVQPERKSRFGLDTLAIAKRAGSQSDGAF 68

Query: 112 KVPIGKPISSVISIDEDEKSSFSMLEDT 29
           KVP     S   + ++++KS  S++E++
Sbjct: 69  KVPKEIITSIAAAAEDEDKSESSVVEES 96


>ref|XP_003597474.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
           truncatula] gi|355486522|gb|AES67725.1|
           Pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Medicago truncatula]
          Length = 1269

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 9/105 (8%)
 Frame = -1

Query: 289 KVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASDDTG-F 113
           +++DIN T+  LEP+ S  GGL +P K++++Y  PERKSRLGLD LA  KRG S   G F
Sbjct: 9   EIVDINKTTTTLEPEKSTGGGLYVPGKDRVVYVAPERKSRLGLDTLAIAKRGESQSDGAF 68

Query: 112 KVPIGKPISSVISI---DEDEKSSFSMLED-----TRIDSHQGER 2
           KVP  K I++ I+    DED+  S  ++E+     TR ++H+  R
Sbjct: 69  KVP--KEITTSIAAAAEDEDKSESSDVVEESGQAGTRRNAHRRYR 111


>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Vitis vinifera]
          Length = 1289

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
 Frame = -1

Query: 283 IDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASD-DTGFKV 107
           ID++  +   EPD    GGL +P K+++++RPP+RKS LGLDVLA  KRG S  D  FKV
Sbjct: 11  IDLDQATVTFEPDQGGGGGLHVPGKDRVVFRPPQRKSLLGLDVLADAKRGGSKADGAFKV 70

Query: 106 PIGKPISSVISIDEDEKSSFSMLED 32
           P  K  S V S+DE+E S  S +++
Sbjct: 71  PREKGASVVASMDEEESSLSSGIDE 95


>ref|XP_006484342.1| PREDICTED: mRNA cap guanine-N7 methyltransferase-like [Citrus
           sinensis]
          Length = 301

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/97 (41%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = -1

Query: 289 KVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASD-DTGF 113
           K++D++ T+ +LEP+ +  GGL +PNKE+ ++R P  K++ GL V A  K G S  D GF
Sbjct: 8   KLVDLDKTTQLLEPEITNGGGLFVPNKERPIFRAPGAKAQSGLGVRAVEKGGGSQIDDGF 67

Query: 112 KVPIGKPISSVISIDEDEKSSFSMLEDTRIDSHQGER 2
           KVP  +  S   SIDE+EKS  S +++   ++  G+R
Sbjct: 68  KVP--RVASVAASIDEEEKSESSGIDEVVSNATNGKR 102


>ref|XP_006484072.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Citrus sinensis]
          Length = 1284

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/97 (41%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = -1

Query: 289 KVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASD-DTGF 113
           K++D++ T+ +LEP+ +  GGL +PNKE+ ++R P  K++ GL V A  K G S  D GF
Sbjct: 8   KLVDLDKTTQLLEPEITNGGGLFVPNKERPIFRAPGAKAQSGLGVRAVEKGGGSQIDDGF 67

Query: 112 KVPIGKPISSVISIDEDEKSSFSMLEDTRIDSHQGER 2
           KVP  +  S   SIDE+EKS  S +++   ++  G+R
Sbjct: 68  KVP--RVASVAASIDEEEKSESSGIDEVVSNATNGKR 102


>ref|XP_006438067.1| hypothetical protein CICLE_v100305311mg, partial [Citrus
           clementina] gi|557540263|gb|ESR51307.1| hypothetical
           protein CICLE_v100305311mg, partial [Citrus clementina]
          Length = 402

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 40/97 (41%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = -1

Query: 289 KVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASD-DTGF 113
           K++D++ T+ +LEP+ +  GGL +PNKE+ ++R P  K++ GL V A  K G S  D GF
Sbjct: 8   KLVDLDKTTQLLEPEITNGGGLFVPNKERPIFRAPGAKAQSGLGVRAVEKGGVSQIDDGF 67

Query: 112 KVPIGKPISSVISIDEDEKSSFSMLEDTRIDSHQGER 2
           KVP  +  S   SIDE+EKS  S +++   ++  G+R
Sbjct: 68  KVP--RVASVAASIDEEEKSESSGIDEVVSNATNGKR 102


>gb|EMT14441.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Aegilops
           tauschii]
          Length = 1265

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/83 (40%), Positives = 52/83 (62%)
 Frame = -1

Query: 304 MEGDDKVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASD 125
           M   D  +D+++T++ L P+     GL +P K+K++YRPP  KS LGLD+LA  KR    
Sbjct: 1   MMSSDGRLDLDATTSTLGPEDDTAQGLILPTKDKVMYRPPPGKSALGLDLLAHKKREKEV 60

Query: 124 DTGFKVPIGKPISSVISIDEDEK 56
           +  FK P  K +++  S+DEDE+
Sbjct: 61  NNSFKRPPEKVVTAASSMDEDER 83


>ref|NP_001059742.1| Os07g0508000 [Oryza sativa Japonica Group]
           gi|33146483|dbj|BAC79592.1| putative DEAH-box RNA
           helicase [Oryza sativa Japonica Group]
           gi|113611278|dbj|BAF21656.1| Os07g0508000 [Oryza sativa
           Japonica Group]
          Length = 1280

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
 Frame = -1

Query: 304 MEGDDKVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASD 125
           MEGD   +D   T+   E DT  +G L +P++++++YRPP  KS LGLD+LA  KR A  
Sbjct: 1   MEGD---MDATMTTLGPEDDTGAQG-LILPSRDRVMYRPPPGKSALGLDLLAHRKREAEG 56

Query: 124 DTGFKVPIGKPISSVISIDEDEKSSFSMLEDTRIDS-HQG 8
              FK P  K +++  SIDEDEK   +  ++  + S H+G
Sbjct: 57  GNAFKPPPQKVVAAATSIDEDEKPGPAESDEKSLSSGHRG 96


>ref|XP_002316148.2| hypothetical protein POPTR_0010s17940g [Populus trichocarpa]
           gi|550330040|gb|EEF02319.2| hypothetical protein
           POPTR_0010s17940g [Populus trichocarpa]
          Length = 1284

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
 Frame = -1

Query: 283 IDINSTSAVLEPDTS--IKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASDDT--G 116
           +DI+ +   +E + S    GGL +P KEKL +RPPERKS LGLDVLA  KRG SD    G
Sbjct: 1   MDIDKSVVTMEAEQSNGSAGGLFVPKKEKLEFRPPERKSLLGLDVLAIAKRGGSDANGGG 60

Query: 115 FKVPIGKPISS-VISIDEDEKSSFS 44
           FK P  +  +S + SIDE+E+++ S
Sbjct: 61  FKAPKERATTSFMASIDEEEEATES 85


>gb|EMS52676.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Triticum
           urartu]
          Length = 1264

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 32/79 (40%), Positives = 51/79 (64%)
 Frame = -1

Query: 292 DKVIDINSTSAVLEPDTSIKGGLCMPNKEKLLYRPPERKSRLGLDVLASTKRGASDDTGF 113
           D  +D+++T++ L P+     GL +P K+K++YRPP  +S LGLD+LA  KR    +  F
Sbjct: 4   DGRLDLDATTSTLGPEDDTAQGLILPTKDKVMYRPPPGRSALGLDLLAHKKREKEGNNSF 63

Query: 112 KVPIGKPISSVISIDEDEK 56
           K P  K +++  S+DEDE+
Sbjct: 64  KRPPEKVVTAASSMDEDER 82


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