BLASTX nr result

ID: Stemona21_contig00032089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00032089
         (521 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ05621.1| hypothetical protein PRUPE_ppb002215mg [Prunus pe...   256   2e-66
ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi...   256   3e-66
gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]     244   9e-63
gb|EOY09049.1| Pentatricopeptide repeat (PPR) superfamily protei...   238   5e-61
ref|XP_002529164.1| pentatricopeptide repeat-containing protein,...   236   2e-60
ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   236   3e-60
ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containi...   234   9e-60
ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containi...   234   9e-60
gb|ESW33429.1| hypothetical protein PHAVU_001G068400g [Phaseolus...   233   2e-59
emb|CBI30094.3| unnamed protein product [Vitis vinifera]              232   3e-59
ref|XP_003589755.1| Pentatricopeptide repeat-containing protein ...   230   1e-58
ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [S...   227   1e-57
gb|EMT01545.1| hypothetical protein F775_52571 [Aegilops tauschii]    227   1e-57
ref|XP_002322628.1| pentatricopeptide repeat-containing family p...   226   2e-57
dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]    226   3e-57
gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvat...   223   2e-56
ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containi...   221   6e-56
ref|XP_006663406.1| PREDICTED: pentatricopeptide repeat-containi...   221   8e-56
ref|XP_004966624.1| PREDICTED: pentatricopeptide repeat-containi...   221   8e-56
ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutr...   218   5e-55

>gb|EMJ05621.1| hypothetical protein PRUPE_ppb002215mg [Prunus persica]
          Length = 634

 Score =  256 bits (655), Expect = 2e-66
 Identities = 127/175 (72%), Positives = 150/175 (85%), Gaps = 3/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P+RNVVSWNAMITGYTQN+RL+EAL+LFERMP RD+PSWNTMITGFIQNGDL+RA+ELF 
Sbjct: 236 PKRNVVSWNAMITGYTQNMRLDEALELFERMPGRDMPSWNTMITGFIQNGDLKRAQELFI 295

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSD-GVKPNQGTFVSVLSAICNLAAFQ 359
            M ++NV++WTT+ITGY QDGQNE A   FSKML D GVKPNQGTFVSVLSA  NLA F 
Sbjct: 296 RMPQKNVISWTTMITGYVQDGQNEKALMFFSKMLVDNGVKPNQGTFVSVLSACSNLAGFS 355

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFD--LSNNKDLVTWN 518
           EG+QIHQ+ISKT+     F+ SALI+MYSKCGE+ TARKMFD  L+ ++D+V+WN
Sbjct: 356 EGQQIHQMISKTVHHECAFLVSALINMYSKCGELVTARKMFDDGLTIHRDMVSWN 410



 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 52/175 (29%), Positives = 104/175 (59%), Gaps = 4/175 (2%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P +NVVSWN MI GY +N +++ AL+LFERMPE+++ SWNT++T    +G +E A+  F+
Sbjct: 143 PVKNVVSWNTMIDGYARNCQVDMALELFERMPEKNVVSWNTVLTALAHSGRIEEARTRFN 202

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M ER+V++WT ++ G+ ++G  + A + F +M      P +    +V+S    +  + +
Sbjct: 203 LMPERDVISWTAMVAGFSRNGMIDEAREFFDRM------PKR----NVVSWNAMITGYTQ 252

Query: 363 GEQIHQIISKTIFQFSPFVQ----SALISMYSKCGEIFTARKMFDLSNNKDLVTW 515
             ++ + +   +F+  P       + +I+ + + G++  A+++F     K++++W
Sbjct: 253 NMRLDEALE--LFERMPGRDMPSWNTMITGFIQNGDLKRAQELFIRMPQKNVISW 305



 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 53/178 (29%), Positives = 105/178 (58%), Gaps = 5/178 (2%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERM-PERDLPSWNTMITGFIQNGDLERAKELF 179
           P+++VV+W  +ITGY +   + EA  LF+R+  ++D+ +W  +++G+I+   ++ A+ LF
Sbjct: 80  PDKDVVTWTTVITGYIRCGMMEEARSLFDRVDAKKDVITWTALVSGYIRLKQMKEAERLF 139

Query: 180 DGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQ 359
             M  +NVV+W T+I GY ++ Q ++A ++F +M     + N  ++ +VL+A+ +    +
Sbjct: 140 YQMPVKNVVSWNTMIDGYARNCQVDMALELFERM----PEKNVVSWNTVLTALAHSGRIE 195

Query: 360 EGEQIHQIISKTIFQFSP----FVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           E        ++T F   P       +A+++ +S+ G I  AR+ FD    +++V+WNA
Sbjct: 196 E--------ARTRFNLMPERDVISWTAMVAGFSRNGMIDEAREFFDRMPKRNVVSWNA 245



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 52/175 (29%), Positives = 96/175 (54%), Gaps = 4/175 (2%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDG 185
           +++V++W A+++GY +  ++ EA  LF +MP +++ SWNTMI G+ +N  ++ A ELF+ 
Sbjct: 113 KKDVITWTALVSGYIRLKQMKEAERLFYQMPVKNVVSWNTMIDGYARNCQVDMALELFER 172

Query: 186 MKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEG 365
           M E+NVV+W T++T     G+ E A   F+ M      P +     V+S    +A F   
Sbjct: 173 MPEKNVVSWNTVLTALAHSGRIEEARTRFNLM------PER----DVISWTAMVAGFSRN 222

Query: 366 EQIHQIISKTIFQFSP----FVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
             I +  ++  F   P       +A+I+ Y++   +  A ++F+    +D+ +WN
Sbjct: 223 GMIDE--AREFFDRMPKRNVVSWNAMITGYTQNMRLDEALELFERMPGRDMPSWN 275


>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  256 bits (653), Expect = 3e-66
 Identities = 125/175 (71%), Positives = 151/175 (86%), Gaps = 3/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERNVVSWNAMITGY QNLRL+EALDLFERMPERDLPSWNTMITG IQNGDL RA++LF+
Sbjct: 235 PERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFN 294

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLS-DGVKPNQGTFVSVLSAICNLAAFQ 359
            M ++NV++WTT+ITG  Q+G++E A K+FS+MLS +G KPNQGTFVSVL A  NLA   
Sbjct: 295 EMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLG 354

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFD--LSNNKDLVTWN 518
           EG+Q+HQIISKT++Q S FV SALI+MYSKCGE+ TARKMFD  +++ +DLV+WN
Sbjct: 355 EGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWN 409



 Score =  104 bits (259), Expect = 1e-20
 Identities = 58/175 (33%), Positives = 104/175 (59%), Gaps = 4/175 (2%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P +NVVSWN MI GY QN R++ A+ LFE+MPER++ SWNT+++   Q G +E A+ LFD
Sbjct: 142 PNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFD 201

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M ER+V++WT +I G  ++G+ + A  +F +M      P +    +V+S    +  + +
Sbjct: 202 RMPERDVISWTAMIAGLSKNGRIDEARLLFDRM------PER----NVVSWNAMITGYAQ 251

Query: 363 GEQIHQIISKTIFQFSPFVQ----SALISMYSKCGEIFTARKMFDLSNNKDLVTW 515
             ++ + +   +F+  P       + +I+   + G++  ARK+F+    K++++W
Sbjct: 252 NLRLDEALD--LFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISW 304



 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 57/172 (33%), Positives = 90/172 (52%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDG 185
           ++NVV+W AM+ GY ++ ++++A  LF  MP +++ SWNTMI G+ QNG ++ A  LF+ 
Sbjct: 112 KKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEK 171

Query: 186 MKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEG 365
           M ERNVV+W T+++   Q G+ E A ++F +M                            
Sbjct: 172 MPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPE-------------------------- 205

Query: 366 EQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
                +IS T          A+I+  SK G I  AR +FD    +++V+WNA
Sbjct: 206 ---RDVISWT----------AMIAGLSKNGRIDEARLLFDRMPERNVVSWNA 244



 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 56/175 (32%), Positives = 100/175 (57%), Gaps = 5/175 (2%)
 Frame = +3

Query: 12  NVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM- 188
           NV   N MIT  +++ R+ EA  LF+ M E D+ +W T+I+G+I+ G +E A+ LFD + 
Sbjct: 51  NVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVD 110

Query: 189 KERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGE 368
            ++NVVTWT ++ GY +  +   A K+F++M      PN+    +V+S    +  + +  
Sbjct: 111 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEM------PNK----NVVSWNTMIDGYAQNG 160

Query: 369 QIHQIISKTIFQFSP----FVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           +I    +  +F+  P       + ++SM ++CG I  AR++FD    +D+++W A
Sbjct: 161 RIDS--AMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTA 213


>gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]
          Length = 622

 Score =  244 bits (623), Expect = 9e-63
 Identities = 117/174 (67%), Positives = 144/174 (82%), Gaps = 2/174 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P +NVVSWNAMITGY QN+RLNEA +LFERMPER+L SWNTMITGFIQNG+L+RA  LF+
Sbjct: 226 PVQNVVSWNAMITGYAQNMRLNEAFELFERMPERNLSSWNTMITGFIQNGELKRASNLFN 285

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M E+N ++WTT+I+GY QDGQNE A K+F+KM+ DG++PN+ TF SVLSA  NLA   E
Sbjct: 286 KMPEKNSISWTTMISGYIQDGQNEEALKMFTKMVVDGIRPNEATFASVLSACSNLAGLGE 345

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFD--LSNNKDLVTWN 518
           G+QIHQ+ISKT+FQ S  + SALI+MYSKCGE+ TARKMFD    + +DLV+WN
Sbjct: 346 GQQIHQMISKTVFQGSEILVSALINMYSKCGELSTARKMFDDGSKSQRDLVSWN 399



 Score =  113 bits (283), Expect = 2e-23
 Identities = 63/175 (36%), Positives = 105/175 (60%), Gaps = 4/175 (2%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P +NVVSWN MI GY QN R+N AL LF+RMPER++ SWNT+IT   Q+G +E A+ LFD
Sbjct: 133 PVKNVVSWNTMIEGYFQNGRVNSALGLFDRMPERNVVSWNTIITALAQSGRMEEARRLFD 192

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M ER+V++WTT++ G+ ++G+ + A  VF +M      P Q    +V+S    +  + +
Sbjct: 193 MMPERDVISWTTMVAGFSRNGRIDEARVVFDRM------PVQ----NVVSWNAMITGYAQ 242

Query: 363 GEQIHQIISKTIFQFSP----FVQSALISMYSKCGEIFTARKMFDLSNNKDLVTW 515
             ++++     +F+  P       + +I+ + + GE+  A  +F+    K+ ++W
Sbjct: 243 NMRLNEAFE--LFERMPERNLSSWNTMITGFIQNGELKRASNLFNKMPEKNSISW 295



 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 58/175 (33%), Positives = 96/175 (54%), Gaps = 4/175 (2%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDG 185
           +++V++W  M+ GY +  R+ EA  LF  MP +++ SWNTMI G+ QNG +  A  LFD 
Sbjct: 103 KKDVITWTVMVNGYLRLRRIKEAERLFFEMPVKNVVSWNTMIEGYFQNGRVNSALGLFDR 162

Query: 186 MKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEG 365
           M ERNVV+W T+IT   Q G+ E A ++F  M      P +     V+S    +A F   
Sbjct: 163 MPERNVVSWNTIITALAQSGRMEEARRLFDMM------PER----DVISWTTMVAGFSRN 212

Query: 366 EQIHQIISKTIFQFSPFVQ----SALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
            +I +  ++ +F   P       +A+I+ Y++   +  A ++F+    ++L +WN
Sbjct: 213 GRIDE--ARVVFDRMPVQNVVSWNAMITGYAQNMRLNEAFELFERMPERNLSSWN 265



 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 48/174 (27%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERM-PERDLPSWNTMITGFIQNGDLERAKELF 179
           P+R+V++W  +ITGY +   + EA  LF+R   ++D+ +W  M+ G+++   ++ A+ LF
Sbjct: 70  PDRDVITWTTVITGYARCGMIEEARKLFDRADAKKDVITWTVMVNGYLRLRRIKEAERLF 129

Query: 180 DGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQ 359
             M  +NVV+W T+I GY Q+G+   A  +F +M     + N  ++ ++++A+      +
Sbjct: 130 FEMPVKNVVSWNTMIEGYFQNGRVNSALGLFDRM----PERNVVSWNTIITALAQSGRME 185

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           E  ++  ++ +          + +++ +S+ G I  AR +FD    +++V+WNA
Sbjct: 186 EARRLFDMMPER----DVISWTTMVAGFSRNGRIDEARVVFDRMPVQNVVSWNA 235



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/134 (26%), Positives = 73/134 (54%), Gaps = 1/134 (0%)
 Frame = +3

Query: 120 NTMITGFIQNGDLERAKELFDGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVK 299
           N  +T   ++G +  A+++FD M +R+V+TWTT+ITGY + G  E A K+F +      K
Sbjct: 47  NWWLTKLSKSGRIGDARQVFDEMPDRDVITWTTVITGYARCGMIEEARKLFDRA---DAK 103

Query: 300 PNQGTFVSVLSAICNLAAFQEGEQI-HQIISKTIFQFSPFVQSALISMYSKCGEIFTARK 476
            +  T+  +++    L   +E E++  ++  K +  ++  ++      Y + G + +A  
Sbjct: 104 KDVITWTVMVNGYLRLRRIKEAERLFFEMPVKNVVSWNTMIEG-----YFQNGRVNSALG 158

Query: 477 MFDLSNNKDLVTWN 518
           +FD    +++V+WN
Sbjct: 159 LFDRMPERNVVSWN 172


>gb|EOY09049.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508717153|gb|EOY09050.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 631

 Score =  238 bits (608), Expect = 5e-61
 Identities = 115/175 (65%), Positives = 148/175 (84%), Gaps = 3/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERNVVSWNAMITGY+QN++L+EA +LFERMPER+L SWN MITGFIQNG+L+RA++LFD
Sbjct: 231 PERNVVSWNAMITGYSQNMKLDEAFELFERMPERNLSSWNAMITGFIQNGELKRAEKLFD 290

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLS-DGVKPNQGTFVSVLSAICNLAAFQ 359
            +  +NVV+WTT+ITGY QD Q+E A K+FSKM++ DGVKPN+GTFVSVLSA  +LA   
Sbjct: 291 KVPRKNVVSWTTMITGYVQDEQSEEALKIFSKMMAEDGVKPNEGTFVSVLSACSDLAGLF 350

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFD--LSNNKDLVTWN 518
           EG+Q+HQ ++KTI+Q S  V SA+I+MYSKCGE+  AR+MFD  L + +D+V+WN
Sbjct: 351 EGQQVHQTLAKTIYQCSEIVVSAIINMYSKCGELNAARRMFDDGLISQRDVVSWN 405



 Score =  107 bits (267), Expect = 2e-21
 Identities = 59/175 (33%), Positives = 103/175 (58%), Gaps = 4/175 (2%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P +NVVSWN M+ GY QN  + +A +LF+ MPER++ SWNTM+T   Q G +E A+ LFD
Sbjct: 138 PVKNVVSWNTMVDGYVQNGMVGKAFELFQEMPERNVVSWNTMLTALAQCGRVEDARGLFD 197

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M +R+V++WT ++ G  ++G+ + A +VF +M      P +    +V+S    +  + +
Sbjct: 198 RMPKRDVISWTAMVAGLAKNGKIDEARRVFDRM------PER----NVVSWNAMITGYSQ 247

Query: 363 GEQIHQIISKTIFQFSP----FVQSALISMYSKCGEIFTARKMFDLSNNKDLVTW 515
             ++ +     +F+  P       +A+I+ + + GE+  A K+FD    K++V+W
Sbjct: 248 NMKLDEAFE--LFERMPERNLSSWNAMITGFIQNGELKRAEKLFDKVPRKNVVSW 300



 Score =  101 bits (252), Expect = 9e-20
 Identities = 57/172 (33%), Positives = 104/172 (60%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDG 185
           ++NVV+W AM++GY ++ R+ EA  LF+ MP +++ SWNTM+ G++QNG + +A ELF  
Sbjct: 108 KKNVVTWTAMLSGYMRSNRILEAKRLFDEMPVKNVVSWNTMVDGYVQNGMVGKAFELFQE 167

Query: 186 MKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEG 365
           M ERNVV+W T++T   Q G+ E A  +F +M    V       +S  + +  LA   + 
Sbjct: 168 MPERNVVSWNTMLTALAQCGRVEDARGLFDRMPKRDV-------ISWTAMVAGLAKNGKI 220

Query: 366 EQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           ++  ++  + + + +    +A+I+ YS+  ++  A ++F+    ++L +WNA
Sbjct: 221 DEARRVFDR-MPERNVVSWNAMITGYSQNMKLDEAFELFERMPERNLSSWNA 271



 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 49/173 (28%), Positives = 103/173 (59%), Gaps = 1/173 (0%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERM-PERDLPSWNTMITGFIQNGDLERAKELFD 182
           +++V++W A+I+GY +   + EA  LF+R+  ++++ +W  M++G++++  +  AK LFD
Sbjct: 76  DKDVITWTALISGYIKLGLIEEARRLFDRVDSKKNVVTWTAMLSGYMRSNRILEAKRLFD 135

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M  +NVV+W T++ GY Q+G    AF++F +M     + N  ++ ++L+A+      ++
Sbjct: 136 EMPVKNVVSWNTMVDGYVQNGMVGKAFELFQEM----PERNVVSWNTMLTALAQCGRVED 191

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
              +   + K          +A+++  +K G+I  AR++FD    +++V+WNA
Sbjct: 192 ARGLFDRMPKR----DVISWTAMVAGLAKNGKIDEARRVFDRMPERNVVSWNA 240



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 45/173 (26%), Positives = 93/173 (53%), Gaps = 3/173 (1%)
 Frame = +3

Query: 12  NVVSWNAMITGYTQNLRLNEALDLFERMPERD--LPSWNTMITGFIQNGDLERAKELFDG 185
           +V   N +IT  +   ++++   LF++MP+RD  + +W  +I+G+I+ G +E A+ LFD 
Sbjct: 45  SVAQSNWLITKLSTEGKISQVRKLFDQMPDRDKDVITWTALISGYIKLGLIEEARRLFDR 104

Query: 186 M-KERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
           +  ++NVVTWT +++GY +  +   A ++F +M    VK        V   + N    + 
Sbjct: 105 VDSKKNVVTWTAMLSGYMRSNRILEAKRLFDEM---PVKNVVSWNTMVDGYVQNGMVGKA 161

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
            E   ++  + +  +     + +++  ++CG +  AR +FD    +D+++W A
Sbjct: 162 FELFQEMPERNVVSW-----NTMLTALAQCGRVEDARGLFDRMPKRDVISWTA 209



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 43/196 (21%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERD--LPSWNTMIT---------GFIQN 149
           P +NVVSW  MITGY Q+ +  EAL +F +M   D   P+  T ++         G  + 
Sbjct: 293 PRKNVVSWTTMITGYVQDEQSEEALKIFSKMMAEDGVKPNEGTFVSVLSACSDLAGLFEG 352

Query: 150 -----------------------------GDLERAKELFDG--MKERNVVTWTTLITGYE 236
                                        G+L  A+ +FD   + +R+VV+W  +I  Y 
Sbjct: 353 QQVHQTLAKTIYQCSEIVVSAIINMYSKCGELNAARRMFDDGLISQRDVVSWNGMIAAYA 412

Query: 237 QDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEG-EQIHQIISKTIFQFSP 413
             G    A  +F KM   G KPN  T+V++LSA  +    ++G     +++     Q   
Sbjct: 413 HHGCGGEAISLFKKMSGFGFKPNGATYVALLSACSHSGMVEDGLRYFDELVRDKSIQVKE 472

Query: 414 FVQSALISMYSKCGEI 461
              + L+ + S+ G++
Sbjct: 473 DHYACLVDLCSRAGKL 488


>ref|XP_002529164.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531388|gb|EEF33223.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 453

 Score =  236 bits (603), Expect = 2e-60
 Identities = 114/175 (65%), Positives = 144/175 (82%), Gaps = 3/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERNVVSWNAMITGY +N+RL EA +LFERMPERDLPSWNTMITGFIQN +L+ A++L D
Sbjct: 182 PERNVVSWNAMITGYAKNMRLVEAFELFERMPERDLPSWNTMITGFIQNKELKLARKLLD 241

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSD-GVKPNQGTFVSVLSAICNLAAFQ 359
            M E+NVV+WTT+ITGY Q+G++E A  +F +M+ D GV PN+GTFV+VL A  +LA   
Sbjct: 242 EMPEKNVVSWTTMITGYVQEGESEAALNIFMEMIRDGGVMPNEGTFVNVLGACSDLAGLG 301

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFD--LSNNKDLVTWN 518
           EG+Q+HQ+ISKT++Q  PFV SALI+MYSKCGE+  ARKMFD   ++ +DLV+WN
Sbjct: 302 EGQQVHQMISKTVYQDMPFVVSALINMYSKCGELDMARKMFDNRTTSQRDLVSWN 356



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 41/97 (42%), Positives = 66/97 (68%), Gaps = 6/97 (6%)
 Frame = +3

Query: 9   RNVVSWNAMITGYT------QNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAK 170
           +NVV+W AM++GY       +  R++EA  LF+ MP+RD+ SW  M+ G  +NG ++ A+
Sbjct: 116 KNVVTWTAMVSGYMRLNQVLEAERVDEARRLFDEMPKRDVISWTAMVAGLARNGRIDEAR 175

Query: 171 ELFDGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKM 281
           ++FD M ERNVV+W  +ITGY ++ +   AF++F +M
Sbjct: 176 KIFDKMPERNVVSWNAMITGYAKNMRLVEAFELFERM 212



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
 Frame = +3

Query: 15  VVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGMKE 194
           V  +N  IT   +  ++NEA  +F+RM ERD+ +W T+ITG+I+   +  A+ LFD    
Sbjct: 55  VARFNWHITKLCREGKINEARQVFDRMLERDVITWTTVITGYIKCRLIVEARRLFDRADA 114

Query: 195 -RNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGEQ 371
            +NVVTWT +++GY +  Q   A +V          P +   +S  + +  LA     ++
Sbjct: 115 MKNVVTWTAMVSGYMRLNQVLEAERVDEARRLFDEMPKRDV-ISWTAMVAGLARNGRIDE 173

Query: 372 IHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
             +I  K + + +    +A+I+ Y+K   +  A ++F+    +DL +WN
Sbjct: 174 ARKIFDK-MPERNVVSWNAMITGYAKNMRLVEAFELFERMPERDLPSWN 221



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 43/143 (30%), Positives = 81/143 (56%), Gaps = 4/143 (2%)
 Frame = +3

Query: 105 DLPSWNTMITGFIQNGDLERAKELFDGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKML 284
           ++  +N  IT   + G +  A+++FD M ER+V+TWTT+ITGY +      A ++F +  
Sbjct: 54  EVARFNWHITKLCREGKINEARQVFDRMLERDVITWTTVITGYIKCRLIVEARRLFDR-- 111

Query: 285 SDGVKPNQGTFVSVLSAICNLAAFQEGEQIHQIISKTIFQFSP----FVQSALISMYSKC 452
           +D +K N  T+ +++S    L    E E++ +  ++ +F   P       +A+++  ++ 
Sbjct: 112 ADAMK-NVVTWTAMVSGYMRLNQVLEAERVDE--ARRLFDEMPKRDVISWTAMVAGLARN 168

Query: 453 GEIFTARKMFDLSNNKDLVTWNA 521
           G I  ARK+FD    +++V+WNA
Sbjct: 169 GRIDEARKIFDKMPERNVVSWNA 191


>ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cicer arietinum]
          Length = 665

 Score =  236 bits (601), Expect = 3e-60
 Identities = 117/175 (66%), Positives = 142/175 (81%), Gaps = 3/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P RNVVSWNAMITGY QN RL+EAL LFERMPERD+PSWNTMITGFIQNGDL RA++LFD
Sbjct: 232 PVRNVVSWNAMITGYAQNGRLDEALKLFERMPERDMPSWNTMITGFIQNGDLNRAEKLFD 291

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKM-LSDGVKPNQGTFVSVLSAICNLAAFQ 359
            M ++NV+TWT+++TGY Q G +E A K+F+KM  +DG+KP  GTFV+VL A  +LA   
Sbjct: 292 EMPQKNVITWTSMMTGYVQHGLSEEALKIFNKMQANDGLKPTTGTFVTVLGACSDLAGLI 351

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFD--LSNNKDLVTWN 518
           EG+QIHQ+ISKT+FQ +  V SALI+MYSKCGE+  ARKMFD  LS   DL++WN
Sbjct: 352 EGQQIHQMISKTVFQENNHVVSALINMYSKCGELQAARKMFDDGLSGQMDLISWN 406



 Score =  110 bits (276), Expect = 1e-22
 Identities = 60/177 (33%), Positives = 104/177 (58%), Gaps = 4/177 (2%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P RNVVSWN MI GY +N R  EALDLF RMPER++ SWNT+IT    +G ++ A+ +F 
Sbjct: 139 PVRNVVSWNTMIDGYARNGRTQEALDLFRRMPERNVVSWNTIITALAHSGRIDDAQGIFS 198

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M+ER+VV+WTT++ G  ++G+ + A ++F +M             +V+S    +  + +
Sbjct: 199 KMQERDVVSWTTMVAGLSKNGRIDDARELFDRM----------PVRNVVSWNAMITGYAQ 248

Query: 363 GEQIHQIISKTIFQFSPFVQ----SALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
             ++ + +   +F+  P       + +I+ + + G++  A K+FD    K+++TW +
Sbjct: 249 NGRLDEALK--LFERMPERDMPSWNTMITGFIQNGDLNRAEKLFDEMPQKNVITWTS 303



 Score =  101 bits (252), Expect = 9e-20
 Identities = 58/171 (33%), Positives = 95/171 (55%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDG 185
           E+NV+ W AM++GY +  R+ EA  LF  MP R++ SWNTMI G+ +NG  + A +LF  
Sbjct: 109 EKNVIVWTAMVSGYVKLNRIEEAERLFYEMPVRNVVSWNTMIDGYARNGRTQEALDLFRR 168

Query: 186 MKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEG 365
           M ERNVV+W T+IT     G+ + A  +FSKM    V       VS  + +  L+     
Sbjct: 169 MPERNVVSWNTIITALAHSGRIDDAQGIFSKMQERDV-------VSWTTMVAGLSKNGRI 221

Query: 366 EQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
           +   ++  +   + +    +A+I+ Y++ G +  A K+F+    +D+ +WN
Sbjct: 222 DDARELFDRMPVR-NVVSWNAMITGYAQNGRLDEALKLFERMPERDMPSWN 271



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 49/173 (28%), Positives = 96/173 (55%), Gaps = 1/173 (0%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERM-PERDLPSWNTMITGFIQNGDLERAKELFD 182
           ER++  W  MI+GY +   + EA  LF+R   E+++  W  M++G+++   +E A+ LF 
Sbjct: 77  ERDICLWTTMISGYIKCGMIKEARKLFDRSDAEKNVIVWTAMVSGYVKLNRIEEAERLFY 136

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M  RNVV+W T+I GY ++G+ + A  +F +M     + N  ++ ++++A+ +     +
Sbjct: 137 EMPVRNVVSWNTMIDGYARNGRTQEALDLFRRM----PERNVVSWNTIITALAHSGRIDD 192

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
            + I   + +          + +++  SK G I  AR++FD    +++V+WNA
Sbjct: 193 AQGIFSKMQER----DVVSWTTMVAGLSKNGRIDDARELFDRMPVRNVVSWNA 241


>ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like isoform X2 [Glycine max]
           gi|571479769|ref|XP_006587961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like isoform X3 [Glycine max]
           gi|571479771|ref|XP_003533693.2| PREDICTED:
           pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 618

 Score =  234 bits (597), Expect = 9e-60
 Identities = 116/175 (66%), Positives = 143/175 (81%), Gaps = 3/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P RNVVSWNAMITGY QN RL+EAL LF+RMPERD+PSWNTMITGFIQNG+L RA++LF 
Sbjct: 221 PVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFG 280

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKML-SDGVKPNQGTFVSVLSAICNLAAFQ 359
            M+E+NV+TWT ++TGY Q G +E A +VF KML ++ +KPN GTFV+VL A  +LA   
Sbjct: 281 EMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLT 340

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFD--LSNNKDLVTWN 518
           EG+QIHQ+ISKT+FQ S  V SALI+MYSKCGE+ TARKMFD  L + +DL++WN
Sbjct: 341 EGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWN 395



 Score =  115 bits (289), Expect = 5e-24
 Identities = 66/173 (38%), Positives = 102/173 (58%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P RNVVSWN M+ GY +N    +ALDLF RMPER++ SWNT+IT  +Q G +E A+ LFD
Sbjct: 128 PLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFD 187

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            MK+R+VV+WTT++ G  ++G+ E A  +F +M    V       VS  + I   A  + 
Sbjct: 188 QMKDRDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNV-------VSWNAMITGYAQNRR 240

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
            ++  Q+  +   +  P   + +I+ + + GE+  A K+F     K+++TW A
Sbjct: 241 LDEALQLFQRMPERDMP-SWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTA 292



 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 56/171 (32%), Positives = 94/171 (54%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDG 185
           ++NVV+W AM+ GY +  ++ EA  LF  MP R++ SWNTM+ G+ +NG  ++A +LF  
Sbjct: 98  KKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRR 157

Query: 186 MKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEG 365
           M ERNVV+W T+IT   Q G+ E A ++F +M    V       VS  + +  LA     
Sbjct: 158 MPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDV-------VSWTTMVAGLAKNGRV 210

Query: 366 EQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
           E    +  +   + +    +A+I+ Y++   +  A ++F     +D+ +WN
Sbjct: 211 EDARALFDQMPVR-NVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWN 260



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 47/175 (26%), Positives = 99/175 (56%), Gaps = 2/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERM-PERDLPSWNTMITGFIQNGDLERAKELF 179
           PER++  W  MITGY +   + EA  LF+R   ++++ +W  M+ G+I+   ++ A+ LF
Sbjct: 65  PERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNVVTWTAMVNGYIKFNQVKEAERLF 124

Query: 180 DGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQ 359
             M  RNVV+W T++ GY ++G  + A  +F +M     + N  ++ ++++A+      +
Sbjct: 125 YEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRM----PERNVVSWNTIITALVQCGRIE 180

Query: 360 EGEQI-HQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           + +++  Q+  + +  +     + +++  +K G +  AR +FD    +++V+WNA
Sbjct: 181 DAQRLFDQMKDRDVVSW-----TTMVAGLAKNGRVEDARALFDQMPVRNVVSWNA 230



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 48/164 (29%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
 Frame = +3

Query: 27  NAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM-KERNV 203
           N  I+   +   ++ A  +FE MPERD+  W TMITG+++ G +  A++LFD    ++NV
Sbjct: 42  NLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNV 101

Query: 204 VTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGEQIHQI 383
           VTWT ++ GY +  Q + A ++F +M    V  +  T V   +   N    Q  +   ++
Sbjct: 102 VTWTAMVNGYIKFNQVKEAERLFYEMPLRNV-VSWNTMVDGYAR--NGLTQQALDLFRRM 158

Query: 384 ISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTW 515
             + +  +     + +I+   +CG I  A+++FD   ++D+V+W
Sbjct: 159 PERNVVSW-----NTIITALVQCGRIEDAQRLFDQMKDRDVVSW 197



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 44/216 (20%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNT-------------------- 125
           E+NV++W AM+TGY Q+    EAL +F +M   +    NT                    
Sbjct: 284 EKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQ 343

Query: 126 --------------------MITGFIQNGDLERAKELFDG--MKERNVVTWTTLITGYEQ 239
                               +I  + + G+L  A+++FD   + +R++++W  +I  Y  
Sbjct: 344 QIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAH 403

Query: 240 DGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEG-EQIHQIISKTIFQFSPF 416
            G  + A  +F++M   GV  N  TFV +L+A  +    +EG +   +I+     Q    
Sbjct: 404 HGYGKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLRED 463

Query: 417 VQSALISMYSKCGEIFTARKMFD-LSNNKDLVTWNA 521
             + L+ +  + G +  A  + + L     L  W A
Sbjct: 464 HYACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGA 499


>ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 714

 Score =  234 bits (597), Expect = 9e-60
 Identities = 113/175 (64%), Positives = 142/175 (81%), Gaps = 3/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P RNVVSWNAM+TGY QN RL EAL+LFERMPERD+PSWNTM+TGFIQNGDLERA ELF 
Sbjct: 233 PRRNVVSWNAMVTGYAQNGRLEEALELFERMPERDMPSWNTMVTGFIQNGDLERAWELFV 292

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSD-GVKPNQGTFVSVLSAICNLAAFQ 359
            M ++NV++WTT+ITGY QDG+NE A  +FSKM+ D G +PN+GTFVS+LSA  NLA   
Sbjct: 293 QMPQKNVISWTTMITGYVQDGRNEEALMIFSKMVVDNGARPNEGTFVSILSACSNLAGLC 352

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSN--NKDLVTWN 518
           EG Q+HQ+I KT++Q    + SALI+MYSKCGE+ +ARKMF+  +  ++D ++WN
Sbjct: 353 EGRQMHQMIIKTVYQECVHLVSALINMYSKCGELVSARKMFEDGSTIHRDYISWN 407



 Score =  105 bits (261), Expect = 8e-21
 Identities = 47/93 (50%), Positives = 69/93 (74%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P RNVVSWN MI GY ++ R++EAL+LFERMPER++ SWNT++T   Q G +E A+ LF 
Sbjct: 140 PVRNVVSWNTMIDGYARSRRVDEALELFERMPERNVVSWNTVLTALAQCGRIEEARRLFG 199

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKM 281
            M ER+V++WT ++ G  ++G+ + A +VF +M
Sbjct: 200 LMPERDVISWTAMVAGLSRNGRVDEAREVFDRM 232



 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 55/174 (31%), Positives = 99/174 (56%), Gaps = 4/174 (2%)
 Frame = +3

Query: 9   RNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM 188
           +NV++W A++ GY +  RL EA  LF +MP R++ SWNTMI G+ ++  ++ A ELF+ M
Sbjct: 111 KNVITWTALVGGYIRLRRLEEAEMLFYQMPVRNVVSWNTMIDGYARSRRVDEALELFERM 170

Query: 189 KERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGE 368
            ERNVV+W T++T   Q G+ E A ++F      G+ P +     V+S    +A      
Sbjct: 171 PERNVVSWNTVLTALAQCGRIEEARRLF------GLMPER----DVISWTAMVAGLSRNG 220

Query: 369 QIHQIISKTIFQFSP----FVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
           ++ +  ++ +F   P       +A+++ Y++ G +  A ++F+    +D+ +WN
Sbjct: 221 RVDE--AREVFDRMPRRNVVSWNAMVTGYAQNGRLEEALELFERMPERDMPSWN 272



 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 52/174 (29%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPE-RDLPSWNTMITGFIQNGDLERAKELF 179
           PER+VV+W  +IT Y ++  L EA  LF+R    +++ +W  ++ G+I+   LE A+ LF
Sbjct: 77  PERDVVTWTTVITAYVKSGMLEEARSLFDRADAVKNVITWTALVGGYIRLRRLEEAEMLF 136

Query: 180 DGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQ 359
             M  RNVV+W T+I GY +  + + A ++F +M     + N  ++ +VL+A+      +
Sbjct: 137 YQMPVRNVVSWNTMIDGYARSRRVDEALELFERM----PERNVVSWNTVLTALAQCGRIE 192

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           E  ++  ++ +          +A+++  S+ G +  AR++FD    +++V+WNA
Sbjct: 193 EARRLFGLMPER----DVISWTAMVAGLSRNGRVDEAREVFDRMPRRNVVSWNA 242


>gb|ESW33429.1| hypothetical protein PHAVU_001G068400g [Phaseolus vulgaris]
          Length = 616

 Score =  233 bits (595), Expect = 2e-59
 Identities = 115/175 (65%), Positives = 142/175 (81%), Gaps = 3/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P RNVVSWN M+TGY QN RLNEAL+LF+RMPER++PSWNTMITGFIQNG+L  A++LF 
Sbjct: 218 PVRNVVSWNVMVTGYAQNGRLNEALELFQRMPERNMPSWNTMITGFIQNGELNHAEKLFR 277

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKML-SDGVKPNQGTFVSVLSAICNLAAFQ 359
            M+ +NV+TWT ++TGY Q G +E A KVF+KML +DG+KPN GTFV+VL A  +LA   
Sbjct: 278 EMRVKNVITWTAMMTGYVQHGLSEEAVKVFNKMLAADGLKPNTGTFVTVLGACSDLAGLT 337

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFD--LSNNKDLVTWN 518
           EG+QIHQ+ISKTIFQ S +V SALI+MYSKCGE+  ARKMFD  L   +DL++WN
Sbjct: 338 EGQQIHQMISKTIFQDSTYVVSALINMYSKCGELRIARKMFDDGLLRQRDLISWN 392



 Score =  112 bits (280), Expect = 5e-23
 Identities = 64/177 (36%), Positives = 104/177 (58%), Gaps = 4/177 (2%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P RNVVSWN M+ GY +N    +ALDLF RMPER++ SWNT+IT  +Q G ++ A+ LFD
Sbjct: 125 PLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITTLVQCGKVDDAQRLFD 184

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            MKER+VV+WTT++ G  ++G+ E A  +F +M             +V+S    +  + +
Sbjct: 185 QMKERDVVSWTTMVAGLSKNGRVEDARALFDQM----------PVRNVVSWNVMVTGYAQ 234

Query: 363 GEQIHQIISKTIFQFSPFVQ----SALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
             ++++ +   +FQ  P       + +I+ + + GE+  A K+F     K+++TW A
Sbjct: 235 NGRLNEALE--LFQRMPERNMPSWNTMITGFIQNGELNHAEKLFREMRVKNVITWTA 289



 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 55/174 (31%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDG 185
           ++NVV+W AMI GY +  ++ EA  LF  MP R++ SWNTM+ G+ +NG  ++A +LF  
Sbjct: 95  KKNVVTWTAMIKGYIRLNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRR 154

Query: 186 MKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLS---AICNLAAF 356
           M ERNVV+W T+IT   Q G+ + A ++F +M    V  +  T V+ LS    + +  A 
Sbjct: 155 MPERNVVSWNTIITTLVQCGKVDDAQRLFDQMKERDV-VSWTTMVAGLSKNGRVEDARAL 213

Query: 357 QEGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
            +   +  ++S  +          +++ Y++ G +  A ++F     +++ +WN
Sbjct: 214 FDQMPVRNVVSWNV----------MVTGYAQNGRLNEALELFQRMPERNMPSWN 257



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 44/173 (25%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERM-PERDLPSWNTMITGFIQNGDLERAKELFD 182
           +R++  W  MI GY +   + EA  LF+R+  ++++ +W  MI G+I+   ++ A+ LF 
Sbjct: 63  DRDIGLWTTMINGYLKCGMIREARKLFDRLDAKKNVVTWTAMIKGYIRLNQVKEAERLFY 122

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M  RNVV+W T++ GY ++G  + A  +F +M     + N  ++ ++++ +       +
Sbjct: 123 EMPLRNVVSWNTMVDGYARNGLTQQALDLFRRM----PERNVVSWNTIITTLVQCGKVDD 178

Query: 363 GEQI-HQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
            +++  Q+  + +  +     + +++  SK G +  AR +FD    +++V+WN
Sbjct: 179 AQRLFDQMKERDVVSW-----TTMVAGLSKNGRVEDARALFDQMPVRNVVSWN 226



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 44/164 (26%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
 Frame = +3

Query: 27  NAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM-KERNV 203
           N +I    ++ ++++A  +F++M +RD+  W TMI G+++ G +  A++LFD +  ++NV
Sbjct: 39  NLLIFRLCEDGKIDDARKVFDKMLDRDIGLWTTMINGYLKCGMIREARKLFDRLDAKKNV 98

Query: 204 VTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGEQIHQI 383
           VTWT +I GY +  Q + A ++F +M    V  +  T V   +   N    Q  +   ++
Sbjct: 99  VTWTAMIKGYIRLNQVKEAERLFYEMPLRNV-VSWNTMVDGYAR--NGLTQQALDLFRRM 155

Query: 384 ISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTW 515
             + +  +     + +I+   +CG++  A+++FD    +D+V+W
Sbjct: 156 PERNVVSW-----NTIITTLVQCGKVDDAQRLFDQMKERDVVSW 194



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 44/215 (20%)
 Frame = +3

Query: 9   RNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNT--------------------- 125
           +NV++W AM+TGY Q+    EA+ +F +M   D    NT                     
Sbjct: 282 KNVITWTAMMTGYVQHGLSEEAVKVFNKMLAADGLKPNTGTFVTVLGACSDLAGLTEGQQ 341

Query: 126 -------------------MITGFIQNGDLERAKELFDG--MKERNVVTWTTLITGYEQD 242
                              +I  + + G+L  A+++FD   +++R++++W  +I  Y   
Sbjct: 342 IHQMISKTIFQDSTYVVSALINMYSKCGELRIARKMFDDGLLRQRDLISWNGMIAAYAHH 401

Query: 243 GQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEG-EQIHQIISKTIFQFSPFV 419
           G  + A  +F++M   GV  N  TFV +L+A  +    +EG +   +I+     Q     
Sbjct: 402 GYGKEAINLFNEMQELGVPANDVTFVGLLTACSHTGLIEEGLKYFDEILKNRSIQLREDH 461

Query: 420 QSALISMYSKCGEIFTARKMFD-LSNNKDLVTWNA 521
            + LI +  + G +  A  + + L     L  W A
Sbjct: 462 YACLIDLCGRAGRLKEAFDIIEGLGEEASLTVWGA 496


>emb|CBI30094.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  232 bits (592), Expect = 3e-59
 Identities = 116/175 (66%), Positives = 144/175 (82%), Gaps = 3/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PER+V+SW AMI G      L+EALDLFERMPERDLPSWNTMITG IQNGDL RA++LF+
Sbjct: 219 PERDVISWTAMIAGL-----LDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFN 273

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLS-DGVKPNQGTFVSVLSAICNLAAFQ 359
            M ++NV++WTT+ITG  Q+G++E A K+FS+MLS +G KPNQGTFVSVL A  NLA   
Sbjct: 274 EMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLG 333

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFD--LSNNKDLVTWN 518
           EG+Q+HQIISKT++Q S FV SALI+MYSKCGE+ TARKMFD  +++ +DLV+WN
Sbjct: 334 EGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWN 388



 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 51/170 (30%), Positives = 91/170 (53%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDG 185
           ++NVV+W AM+ GY ++ ++++A  LF  MP +++ SWNTMI G+ QNG ++ A  LF+ 
Sbjct: 127 KKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEK 186

Query: 186 MKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEG 365
           M ERNVV+W T+++   Q G+ E A ++F +M    V         +L    +L      
Sbjct: 187 MPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLDEALDLFERMPE 246

Query: 366 EQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTW 515
             +                + +I+   + G++  ARK+F+    K++++W
Sbjct: 247 RDLPS-------------WNTMITGLIQNGDLRRARKLFNEMPKKNVISW 283



 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 56/175 (32%), Positives = 100/175 (57%), Gaps = 5/175 (2%)
 Frame = +3

Query: 12  NVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM- 188
           NV   N MIT  +++ R+ EA  LF+ M E D+ +W T+I+G+I+ G +E A+ LFD + 
Sbjct: 66  NVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVD 125

Query: 189 KERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGE 368
            ++NVVTWT ++ GY +  +   A K+F++M      PN+    +V+S    +  + +  
Sbjct: 126 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEM------PNK----NVVSWNTMIDGYAQNG 175

Query: 369 QIHQIISKTIFQFSP----FVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           +I    +  +F+  P       + ++SM ++CG I  AR++FD    +D+++W A
Sbjct: 176 RIDS--AMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTA 228


>ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478803|gb|AES60006.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 891

 Score =  230 bits (587), Expect = 1e-58
 Identities = 112/175 (64%), Positives = 138/175 (78%), Gaps = 3/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P RNVVSWNAMI GY QN R +EAL LFERMPERD+PSWNTM+TGFIQNGDL RA++LF 
Sbjct: 228 PIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFH 287

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKM-LSDGVKPNQGTFVSVLSAICNLAAFQ 359
            M ++NV+TWT ++TGY Q G +E A K+F+KM  +DG+KP  GTFV+VL A  +LA   
Sbjct: 288 AMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLP 347

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFD--LSNNKDLVTWN 518
           EG+QIHQ+ISKT+FQ S +V SALI+MYSKCG+   A+KMFD  LS + DL+ WN
Sbjct: 348 EGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWN 402



 Score =  111 bits (278), Expect = 9e-23
 Identities = 61/177 (34%), Positives = 103/177 (58%), Gaps = 4/177 (2%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P RNVVSWN MI GY +N R  EALDLF RMPER++ SWNT++T     G ++ A+ LF+
Sbjct: 135 PVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFN 194

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M+ER+VV+WTT++ G  ++G+ + A +VF KM             +V+S    +A + +
Sbjct: 195 EMRERDVVSWTTMVAGLSKNGRVDAAREVFDKM----------PIRNVVSWNAMIAGYAQ 244

Query: 363 GEQIHQIISKTIFQFSPFVQ----SALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
             +  + +   +F+  P       + +++ + + G++  A ++F     K+++TW A
Sbjct: 245 NGRFDEALK--LFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTA 299



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 54/171 (31%), Positives = 95/171 (55%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDG 185
           +++V+ W AM++GY +  R+ EA  LF  MP R++ SWNTMI G+ +NG  + A +LF  
Sbjct: 105 QKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGR 164

Query: 186 MKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEG 365
           M ERNVV+W T++T     G+ + A ++F++M    V       VS  + +  L+     
Sbjct: 165 MPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDV-------VSWTTMVAGLSKNGRV 217

Query: 366 EQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
           +   ++  K   + +    +A+I+ Y++ G    A K+F+    +D+ +WN
Sbjct: 218 DAAREVFDKMPIR-NVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWN 267



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 49/174 (28%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERM-PERDLPSWNTMITGFIQNGDLERAKELFD 182
           +R+   W  MI+GY +   +NEA  LF+R   ++ +  W  M++G+I+   +E A+ LF+
Sbjct: 73  KRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAERLFN 132

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M  RNVV+W T+I GY ++G+ + A  +F +M     + N  ++ +V++A+ +     +
Sbjct: 133 EMPVRNVVSWNTMIDGYARNGRTQEALDLFGRM----PERNVVSWNTVMTALAHCGRIDD 188

Query: 363 GEQI-HQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
            E++ +++  + +  +     + +++  SK G +  AR++FD    +++V+WNA
Sbjct: 189 AERLFNEMRERDVVSW-----TTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNA 237


>ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
           gi|241916012|gb|EER89156.1| hypothetical protein
           SORBIDRAFT_10g002620 [Sorghum bicolor]
          Length = 623

 Score =  227 bits (579), Expect = 1e-57
 Identities = 109/172 (63%), Positives = 138/172 (80%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERNVVSWNAMI+GYT+N R++EALDLF +MPERD+ S N M+TGFIQN DL+RA+ELFD
Sbjct: 225 PERNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFD 284

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M ERNVVTWTT++ GY +  Q+E+A  +FS ML  G +PNQ TF+  L A  +LAA  E
Sbjct: 285 EMPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCE 344

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
           G+Q+HQ+I KT FQF  FV+SAL+++Y+KCGEI  ARK+FDLS  KDL++WN
Sbjct: 345 GKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREKDLISWN 396



 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 53/175 (30%), Positives = 97/175 (55%), Gaps = 4/175 (2%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P+RNVVSWN M+  Y    R+ +A  LF+RMP RD  SWN ++   +++G +++A+ELF 
Sbjct: 132 PQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRSGSVDKARELFG 191

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M ER+V+ WTT++ G  + G+ + A  +F  M      P +    +V+S    ++ +  
Sbjct: 192 RMPERDVMAWTTMVDGVARSGKVDEARVLFDSM------PER----NVVSWNAMISGYTR 241

Query: 363 GEQIHQIISKTIFQFSPFVQSA----LISMYSKCGEIFTARKMFDLSNNKDLVTW 515
             +I + +   +F   P    A    +++ + +  ++  AR++FD    +++VTW
Sbjct: 242 NHRIDEALD--LFMKMPERDIASCNIMVTGFIQNKDLKRARELFDEMPERNVVTW 294



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 42/175 (24%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERM-PERDLPSWNTMITGFIQNGDLERAKELF 179
           P+ +VVSW A+++ Y +   L +A +LF+R    R++ +W  +++G+ +   ++ A+ LF
Sbjct: 69  PDWDVVSWTALVSAYARRGMLRDARELFDRPDARRNVVTWTALLSGYARARLVDEAEALF 128

Query: 180 DGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQ 359
             M +RNVV+W T++  Y   G+   A  +F +M       + G++  +L+ +    +  
Sbjct: 129 QRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRM----PVRDAGSWNILLATLVRSGSVD 184

Query: 360 EGEQIH-QIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           +  ++  ++  + +  ++  V        ++ G++  AR +FD    +++V+WNA
Sbjct: 185 KARELFGRMPERDVMAWTTMVDGV-----ARSGKVDEARVLFDSMPERNVVSWNA 234



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
 Frame = +3

Query: 27  NAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM-KERNV 203
           N +I       R+ +A  LF+  P+ D+ SW  +++ + + G L  A+ELFD     RNV
Sbjct: 46  NRLIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDRPDARRNV 105

Query: 204 VTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGEQIHQI 383
           VTWT L++GY +    + A  +F +M     + N  ++ ++L A    AA + G+     
Sbjct: 106 VTWTALLSGYARARLVDEAEALFQRM----PQRNVVSWNTMLEAYA--AAGRVGD----- 154

Query: 384 ISKTIFQFSPFVQSA----LISMYSKCGEIFTARKMFDLSNNKDLVTW 515
            +  +F   P   +     L++   + G +  AR++F     +D++ W
Sbjct: 155 -ACALFDRMPVRDAGSWNILLATLVRSGSVDKARELFGRMPERDVMAW 201


>gb|EMT01545.1| hypothetical protein F775_52571 [Aegilops tauschii]
          Length = 911

 Score =  227 bits (578), Expect = 1e-57
 Identities = 104/172 (60%), Positives = 138/172 (80%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERNVVSWNAMI+GY +NLR++EALDLF  MPERD+ SWN MITGFIQN DL++A+ELFD
Sbjct: 204 PERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFD 263

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M +RNVV+WTT++ G  Q  ++E+A +VF+ ML DG++PNQ TF+  + A  NLA   E
Sbjct: 264 EMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDACSNLAGLSE 323

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
           G+Q+HQ+I KT FQF  F++S L+++Y+KCGEI  ARK+FDLS  KD+++WN
Sbjct: 324 GQQVHQMICKTPFQFDNFIESTLMNLYAKCGEIRLARKVFDLSGEKDVISWN 375



 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 39/93 (41%), Positives = 63/93 (67%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P R+  SWN ++    ++  ++EA +LFERMPER++ SW TM+ G  ++G ++ A+ LFD
Sbjct: 142 PVRDAGSWNILLAALVRSGTMDEARNLFERMPERNVMSWTTMVAGLARSGSVDEARGLFD 201

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKM 281
           GM ERNVV+W  +I+GY ++ + + A  +F  M
Sbjct: 202 GMPERNVVSWNAMISGYARNLRIDEALDLFMNM 234



 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERNVVSWN M+  Y    R   A  LF+ MP RD  SWN ++   +++G ++ A+ LF+
Sbjct: 111 PERNVVSWNTMLEAYASAGRTGAACALFDSMPVRDAGSWNILLAALVRSGTMDEARNLFE 170

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M ERNV++WTT++ G  + G  + A  +F     DG+        +V+S    ++ +  
Sbjct: 171 RMPERNVMSWTTMVAGLARSGSVDEARGLF-----DGMPER-----NVVSWNAMISGYAR 220

Query: 363 GEQIHQIISKTIFQFSPFVQSA----LISMYSKCGEIFTARKMFDLSNNKDLVTW 515
             +I + +   +F   P    A    +I+ + +  ++  A+++FD    +++V+W
Sbjct: 221 NLRIDEALD--LFMNMPERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSW 273



 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 48/174 (27%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERM-PERDLPSWNTMITGFIQNGDLERAKELF 179
           P+R+VVSW AM+  Y +  +L+EA  LF R    R++ +W  +++G+ +    + A+ LF
Sbjct: 48  PDRDVVSWTAMVAAYARQGQLHEASALFHRPDARRNVVTWTALLSGYARARRADEARALF 107

Query: 180 DGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQ 359
           D M ERNVV+W T++  Y   G+   A  +F  M       + G++  +L+A+       
Sbjct: 108 DRMPERNVVSWNTMLEAYASAGRTGAACALFDSM----PVRDAGSWNILLAALVRSGTMD 163

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           E   + + + +     +    + +++  ++ G +  AR +FD    +++V+WNA
Sbjct: 164 EARNLFERMPER----NVMSWTTMVAGLARSGSVDEARGLFDGMPERNVVSWNA 213



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 48/170 (28%), Positives = 87/170 (51%)
 Frame = +3

Query: 9   RNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM 188
           RNVV+W A+++GY +  R +EA  LF+RMPER++ SWNTM+  +   G    A  LFD M
Sbjct: 82  RNVVTWTALLSGYARARRADEARALFDRMPERNVVSWNTMLEAYASAGRTGAACALFDSM 141

Query: 189 KERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGE 368
             R+  +W  L+    + G  + A  +F +M     + N  ++ ++++ +    +  E  
Sbjct: 142 PVRDAGSWNILLAALVRSGTMDEARNLFERM----PERNVMSWTTMVAGLARSGSVDEAR 197

Query: 369 QIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
            +   + +     +    +A+IS Y++   I  A  +F     +D+ +WN
Sbjct: 198 GLFDGMPER----NVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWN 243



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 40/201 (19%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERM------PER-------------------- 104
           P+RNVVSW  M+ G  Q      AL +F  M      P +                    
Sbjct: 266 PKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDACSNLAGLSEGQ 325

Query: 105 -------------DLPSWNTMITGFIQNGDLERAKELFDGMKERNVVTWTTLITGYEQDG 245
                        D    +T++  + + G++  A+++FD   E++V++W  +I  Y   G
Sbjct: 326 QVHQMICKTPFQFDNFIESTLMNLYAKCGEIRLARKVFDLSGEKDVISWNGIIAAYAHHG 385

Query: 246 QNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGEQIHQIISK-TIFQFSPFVQ 422
               A  ++ KM  +G KPN  T+V +LSA  +     EG +I + ++K           
Sbjct: 386 AGVEAIALYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDQSIAVRDEHY 445

Query: 423 SALISMYSKCGEIFTARKMFD 485
           + LI + S+ G +  A+++ +
Sbjct: 446 TCLIDLCSRAGRLDDAKRLIN 466


>ref|XP_002322628.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222867258|gb|EEF04389.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 559

 Score =  226 bits (576), Expect = 2e-57
 Identities = 107/175 (61%), Positives = 143/175 (81%), Gaps = 3/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERNVVSWNAM+TGY +N+RL+EA DLFERMPER+L SWNTMITGFIQNG+L  A+++F+
Sbjct: 158 PERNVVSWNAMVTGYAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFN 217

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSD-GVKPNQGTFVSVLSAICNLAAFQ 359
            M E+NVV+WTT+ITGY Q+G++E A KVF +M+ D G +PN+GTFV+VL A  ++A   
Sbjct: 218 EMPEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLG 277

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFD--LSNNKDLVTWN 518
           EG+Q+H +ISK+++Q   FV SAL++MYSKCGE+  ARK+FD  + + +DLV WN
Sbjct: 278 EGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVISQRDLVLWN 332



 Score =  102 bits (253), Expect = 7e-20
 Identities = 56/171 (32%), Positives = 100/171 (58%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P +NVVSWN MI GY +N  +++A+++FERM ER++ SWN +I   +Q G +E A+  FD
Sbjct: 65  PVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEARRRFD 124

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M +R+V++WTT++ G  + G+ + A KVF +M    V       VS  + +   A    
Sbjct: 125 EMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNV-------VSWNAMVTGYAKNMR 177

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTW 515
            ++   +  + + + +    + +I+ + + GE+  ARK+F+    K++V+W
Sbjct: 178 LDEAFDLFER-MPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSW 227



 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 51/170 (30%), Positives = 97/170 (57%)
 Frame = +3

Query: 9   RNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM 188
           ++VV+W AM++GY +  R+ EA  LFE MP +++ SWNTMI G+ +N ++++A E+F+ M
Sbjct: 36  KDVVTWTAMLSGYVRLKRIEEAERLFEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERM 95

Query: 189 KERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGE 368
            ERN+V+W  +I    Q G+ E A + F +M    V       +S  + +  LA     +
Sbjct: 96  HERNMVSWNAVIAALVQCGRVEEARRRFDEMPKRDV-------ISWTTMVMGLARSGRVD 148

Query: 369 QIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
           +  ++  + + + +    +A+++ Y+K   +  A  +F+    ++L +WN
Sbjct: 149 EARKVFDR-MPERNVVSWNAMVTGYAKNMRLDEAFDLFERMPERNLSSWN 197



 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 49/174 (28%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
 Frame = +3

Query: 6   ERNVVSWNAMITGYTQNLRLNEALDLFERMPE-RDLPSWNTMITGFIQNGDLERAKELFD 182
           ER+VV+W A+I+GY +   + +A  LF+R+   +D+ +W  M++G+++   +E A+ LF+
Sbjct: 3   ERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERLFE 62

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M  +NVV+W T+I GY ++ + + A +VF +M     + N  ++ +V++A+      +E
Sbjct: 63  VMPVKNVVSWNTMIDGYGKNREVDKAIEVFERM----HERNMVSWNAVIAALVQCGRVEE 118

Query: 363 G-EQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
              +  ++  + +  ++  V        ++ G +  ARK+FD    +++V+WNA
Sbjct: 119 ARRRFDEMPKRDVISWTTMVMG-----LARSGRVDEARKVFDRMPERNVVSWNA 167



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 39/142 (27%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
 Frame = +3

Query: 93  MPERDLPSWNTMITGFIQNGDLERAKELFDGMKE-RNVVTWTTLITGYEQDGQNEVAFKV 269
           M ERD+ +W  +I+G+I+ G +  A+ LFD +   ++VVTWT +++GY +  + E A ++
Sbjct: 1   MHERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERL 60

Query: 270 FSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGEQIHQIISKTIFQFSPFVQSALISMYSK 449
           F  M    V       VS  + I      +E ++  ++  + + + +    +A+I+   +
Sbjct: 61  FEVMPVKNV-------VSWNTMIDGYGKNREVDKAIEVFER-MHERNMVSWNAVIAALVQ 112

Query: 450 CGEIFTARKMFDLSNNKDLVTW 515
           CG +  AR+ FD    +D+++W
Sbjct: 113 CGRVEEARRRFDEMPKRDVISW 134


>dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 623

 Score =  226 bits (575), Expect = 3e-57
 Identities = 104/172 (60%), Positives = 138/172 (80%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERNVVSWNAMI+GY +NLR++EALDLF  MPERD+ SWN MITGFIQN DL++A+ELFD
Sbjct: 222 PERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFD 281

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M +RNVV+WTT++ G  Q  ++E+A +VF+ ML DG++PNQ TF+  + A  NLA   E
Sbjct: 282 EMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSE 341

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
           G+Q+HQ+I KT FQF  F++S+L+ +Y+KCGEI  ARK+FDLS  KD+++WN
Sbjct: 342 GQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWN 393



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 53/175 (30%), Positives = 95/175 (54%), Gaps = 4/175 (2%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERNVVSWN M+  Y    R+  A  LF+ MP RD  SWN ++   +++G ++ A+ LF+
Sbjct: 129 PERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLAALVRSGTMDEARRLFE 188

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M ERNV++WTT+I+G  + G  + A     + L DG+        +V+S    ++ +  
Sbjct: 189 RMPERNVMSWTTMISGLARSGSADEA-----RALFDGMPER-----NVVSWNAMISGYAR 238

Query: 363 GEQIHQIISKTIFQFSPFVQSA----LISMYSKCGEIFTARKMFDLSNNKDLVTW 515
             +I + +   +F   P    A    +I+ + +  ++  A+++FD    +++V+W
Sbjct: 239 NLRIDEALD--LFMNMPERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSW 291



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 50/170 (29%), Positives = 91/170 (53%)
 Frame = +3

Query: 9   RNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM 188
           RNVV+W A+++GY +  R++EA  LF+RMPER++ SWNTM+  +   G +  A  LFDGM
Sbjct: 100 RNVVTWTALLSGYARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGM 159

Query: 189 KERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGE 368
             R+  +W  L+    + G  + A ++F +M     + N  ++ +++S +    +  E  
Sbjct: 160 PVRDAGSWNILLAALVRSGTMDEARRLFERM----PERNVMSWTTMISGLARSGSADEAR 215

Query: 369 QIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
            +   + +     +    +A+IS Y++   I  A  +F     +D+ +WN
Sbjct: 216 ALFDGMPER----NVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWN 261



 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 49/174 (28%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERM-PERDLPSWNTMITGFIQNGDLERAKELF 179
           P+R+VVSW AM+  Y +  +L+EA  L  R    R++ +W  +++G+ +   ++ A+ LF
Sbjct: 66  PDRDVVSWTAMVAAYARQGQLHEASALLHRPDARRNVVTWTALLSGYARARRVDEARALF 125

Query: 180 DGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQ 359
           D M ERNVV+W T++  Y   G+   A  +F  M       + G++  +L+A+       
Sbjct: 126 DRMPERNVVSWNTMLEAYASAGRMGAACALFDGM----PVRDAGSWNILLAALVRSGTMD 181

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           E  ++ + + +     +    + +IS  ++ G    AR +FD    +++V+WNA
Sbjct: 182 EARRLFERMPER----NVMSWTTMISGLARSGSADEARALFDGMPERNVVSWNA 231



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 40/201 (19%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDL-PSWNTMI---------------- 131
           P+RNVVSW  M+ G  Q      AL +F  M    + P+  T +                
Sbjct: 284 PKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQ 343

Query: 132 -------------TGFIQN---------GDLERAKELFDGMKERNVVTWTTLITGYEQDG 245
                          FI++         G++  A+++FD   E++V++W  +I  Y   G
Sbjct: 344 QVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHG 403

Query: 246 QNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGEQIHQIISK-TIFQFSPFVQ 422
               A  ++ KM  +  KPN  T+V +LSA  +     EG +I + ++K           
Sbjct: 404 AGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHY 463

Query: 423 SALISMYSKCGEIFTARKMFD 485
           S LI + S+ G +  A+++ +
Sbjct: 464 SCLIDLCSRAGRLDDAKRLIN 484


>gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
          Length = 618

 Score =  223 bits (568), Expect = 2e-56
 Identities = 101/172 (58%), Positives = 135/172 (78%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERNVVSWNAMI+GY +N R++EA DLF +MP RD+ SWN MITGFIQ+ DLERA++LFD
Sbjct: 218 PERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERAQDLFD 277

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M  RNV+TWTT++ GY Q  Q+E A ++F+ ML +G++PNQ TF+  + A  NLA   E
Sbjct: 278 KMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSE 337

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
           G+Q+HQ+I KT FQF  F++S L+++Y+KCGEI  ARK+FDLS  KD+++WN
Sbjct: 338 GQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWN 389



 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 54/171 (31%), Positives = 93/171 (54%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERNVVSWN M+  YT   R+ +A  LF+ MP RD  SWN ++   +++G++++A++LFD
Sbjct: 125 PERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAALVRSGNMDKARKLFD 184

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M ERNV+ WTT++ G  + G  + A  +F  M    V       VS  + I   A    
Sbjct: 185 RMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERNV-------VSWNAMISGYARNHR 237

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTW 515
            ++ H +  K   +      + +I+ + +  ++  A+ +FD    ++++TW
Sbjct: 238 IDEAHDLFMKMPTR-DIASWNIMITGFIQDRDLERAQDLFDKMPRRNVITW 287



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 51/170 (30%), Positives = 90/170 (52%)
 Frame = +3

Query: 9   RNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM 188
           RNVV+W A+++GY +  R++EA  LF+RMPER++ SWNTM+  +   G +  A  LFDGM
Sbjct: 96  RNVVTWTALLSGYARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGM 155

Query: 189 KERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGE 368
             R+  +W  L+    + G  + A K+F +M     + N   + ++++ I    +  E  
Sbjct: 156 PVRDAGSWNILLAALVRSGNMDKARKLFDRM----PERNVMAWTTMVAGIARSGSVDEAR 211

Query: 369 QIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
            +   + +     +    +A+IS Y++   I  A  +F     +D+ +WN
Sbjct: 212 ALFDGMPER----NVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWN 257



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 45/174 (25%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERM-PERDLPSWNTMITGFIQNGDLERAKELF 179
           P+R+VVSW A++  Y +   L++A  LF+R    R++ +W  +++G+ + G ++ A+ LF
Sbjct: 62  PDRDVVSWTALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALF 121

Query: 180 DGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQ 359
             M ERNVV+W T++  Y   G+   A+ +F  M       + G++  +L+A+       
Sbjct: 122 QRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGM----PVRDAGSWNILLAALVRSGNMD 177

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           +  ++   + +     +    + +++  ++ G +  AR +FD    +++V+WNA
Sbjct: 178 KARKLFDRMPER----NVMAWTTMVAGIARSGSVDEARALFDGMPERNVVSWNA 227



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 41/214 (19%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLP----------------------- 113
           P RNV++W  M+ GY Q+++   AL +F  M    +                        
Sbjct: 280 PRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQ 339

Query: 114 -----------SWNTMITGFIQN-----GDLERAKELFDGMKERNVVTWTTLITGYEQDG 245
                       ++T I   + N     G++  A+++FD  KE++V++W  +I  Y   G
Sbjct: 340 QVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAHHG 399

Query: 246 QNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGEQIHQ-IISKTIFQFSPFVQ 422
               A  ++ KM   G KPN  T+V +LSA  +     EG +I + ++            
Sbjct: 400 VGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHY 459

Query: 423 SALISMYSKCGEIFTARKMFD-LSNNKDLVTWNA 521
           + LI + S+ G +  A+++   L        WNA
Sbjct: 460 TCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNA 493



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
 Frame = +3

Query: 60  RLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM-KERNVVTWTTLITGYE 236
           R+++A  LF+R P+RD+ SW  ++  + + G L  A+ LFD     RNVVTWT L++GY 
Sbjct: 50  RVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYA 109

Query: 237 QDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGEQIHQIISKTIFQFSPF 416
           + G+ + A  +F +M      P +    +V+S    L A+    ++    + T+F   P 
Sbjct: 110 RAGRVDEAEALFQRM------PER----NVVSWNTMLEAYTSAGRVRD--AWTLFDGMPV 157

Query: 417 VQSA----LISMYSKCGEIFTARKMFDLSNNKDLVTW 515
             +     L++   + G +  ARK+FD    ++++ W
Sbjct: 158 RDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAW 194


>ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Brachypodium distachyon]
          Length = 618

 Score =  221 bits (564), Expect = 6e-56
 Identities = 102/172 (59%), Positives = 134/172 (77%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERNVVSWNAMI+GY +N  ++EA DLF +MP RD+ SWN MITGFIQN +LERA+ELFD
Sbjct: 218 PERNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLERAQELFD 277

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M  RNVVTWTT++ GY Q  Q+E A ++F+ ML DG++PNQ TF+  + A  NLA   E
Sbjct: 278 KMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSE 337

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
           G+Q+HQ+I KT FQF  F++S L+++Y+KCGEI  ARK+F+LS  KD+++WN
Sbjct: 338 GQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWN 389



 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 55/171 (32%), Positives = 92/171 (53%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERNVVSWN M+  YT + R+ +A  LF  MP RD  SWN ++   +++G++++A++LFD
Sbjct: 125 PERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNILLAALVRSGNIDKARKLFD 184

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M ERNV+ WTT++ G  + G    A  +F  M    V       VS  + I   A    
Sbjct: 185 RMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNV-------VSWNAMISGYARNHM 237

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTW 515
            ++ H +  K   +      + +I+ + +   +  A+++FD    +++VTW
Sbjct: 238 IDEAHDLFMKMPTR-DIASWNIMITGFIQNKNLERAQELFDKMPRRNVVTW 287



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 50/170 (29%), Positives = 90/170 (52%)
 Frame = +3

Query: 9   RNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM 188
           RNVV+W A+++GY +  R++EA  LF RMPER++ SWNTM+  +  +G +  A  LF+GM
Sbjct: 96  RNVVTWTALLSGYARAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGM 155

Query: 189 KERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGE 368
             R+  +W  L+    + G  + A K+F +M     + N   + ++++ I    +  E  
Sbjct: 156 PVRDAGSWNILLAALVRSGNIDKARKLFDRM----PERNVMAWTTMVAGIARSGSVNEAR 211

Query: 369 QIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
            +   + +     +    +A+IS Y++   I  A  +F     +D+ +WN
Sbjct: 212 ALFDGMPER----NVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWN 257



 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 45/174 (25%), Positives = 93/174 (53%), Gaps = 1/174 (0%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERM-PERDLPSWNTMITGFIQNGDLERAKELF 179
           P+R+VVSW A++  Y     L++A  LF+R    R++ +W  +++G+ + G ++ A+ LF
Sbjct: 62  PDRDVVSWTALVAAYACQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALF 121

Query: 180 DGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQ 359
             M ERNVV+W T++  Y   G+   A  +F+ M       + G++  +L+A+       
Sbjct: 122 GRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGM----PVRDAGSWNILLAALVRSGNID 177

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           +  ++   + +     +    + +++  ++ G +  AR +FD    +++V+WNA
Sbjct: 178 KARKLFDRMPER----NVMAWTTMVAGIARSGSVNEARALFDGMPERNVVSWNA 227



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 41/214 (19%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERM------PER-------------------- 104
           P RNVV+W  M+ GY Q+++   AL LF  M      P +                    
Sbjct: 280 PRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQ 339

Query: 105 -------------DLPSWNTMITGFIQNGDLERAKELFDGMKERNVVTWTTLITGYEQDG 245
                        D    +T++  + + G++  A+++F+  KE++V++W  +I  Y   G
Sbjct: 340 QVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHG 399

Query: 246 QNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGEQIHQ-IISKTIFQFSPFVQ 422
               A  ++ KM  +G KPN  T+V +LSA  +     EG +I + ++            
Sbjct: 400 VGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHY 459

Query: 423 SALISMYSKCGEIFTARKMFD-LSNNKDLVTWNA 521
           + LI + S+ G +  A+++   L        WNA
Sbjct: 460 TCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNA 493



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
 Frame = +3

Query: 60  RLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM-KERNVVTWTTLITGYE 236
           R+++A  LF+R P+RD+ SW  ++  +   G L  A+ LFD     RNVVTWT L++GY 
Sbjct: 50  RVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDRPDARRNVVTWTALLSGYA 109

Query: 237 QDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGEQIHQIISKTIFQFSPF 416
           + G+ + A  +F +M      P +    +V+S    L A+    ++    + T+F   P 
Sbjct: 110 RAGRVDEAEALFGRM------PER----NVVSWNTMLEAYTSSGRVGD--ACTLFNGMPV 157

Query: 417 VQSA----LISMYSKCGEIFTARKMFDLSNNKDLVTW 515
             +     L++   + G I  ARK+FD    ++++ W
Sbjct: 158 RDAGSWNILLAALVRSGNIDKARKLFDRMPERNVMAW 194


>ref|XP_006663406.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Oryza brachyantha]
          Length = 618

 Score =  221 bits (563), Expect = 8e-56
 Identities = 104/172 (60%), Positives = 135/172 (78%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P+RNVVSWNAMI+GY +N R+ EALDLF +MP RD+ SWN MITGFIQN DL+ A+ELFD
Sbjct: 220 PKRNVVSWNAMISGYARNHRIEEALDLFTKMPVRDVASWNIMITGFIQNKDLKSARELFD 279

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M +RNV+TWTT++ GY Q  Q+E+A K+F+ ML +G++PNQ TF+  L A  NLAA  E
Sbjct: 280 EMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVEGIRPNQVTFLGSLDACSNLAALCE 339

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
           G+QIHQ+I KT FQF  FV+S L+++Y+KCGEI  AR +FD +  KDL++WN
Sbjct: 340 GQQIHQMIYKTSFQFDTFVESTLMNLYAKCGEITLARNVFDFATEKDLISWN 391



 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 52/175 (29%), Positives = 99/175 (56%), Gaps = 4/175 (2%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERN+VSWN M+  YT   R+ +A  LF  MP RD  SWN ++   +++G+LE+A ++F+
Sbjct: 127 PERNIVSWNTMLEAYTTVGRVQDAYALFNSMPVRDCGSWNILLAALVRSGNLEKACQVFE 186

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M  R+V++WTT+++G  ++G  + A  +F  M      P +    +V+S    ++ +  
Sbjct: 187 RMPARDVMSWTTMVSGLARNGSVDEARVLFDAM------PKR----NVVSWNAMISGYAR 236

Query: 363 GEQIHQIISKTIFQFSPFVQSA----LISMYSKCGEIFTARKMFDLSNNKDLVTW 515
             +I + +   +F   P    A    +I+ + +  ++ +AR++FD    ++++TW
Sbjct: 237 NHRIEEALD--LFTKMPVRDVASWNIMITGFIQNKDLKSARELFDEMPKRNVITW 289



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 51/170 (30%), Positives = 90/170 (52%)
 Frame = +3

Query: 9   RNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM 188
           RNVV+W A+++GY +   ++EA  LFERMPER++ SWNTM+  +   G ++ A  LF+ M
Sbjct: 98  RNVVTWTALMSGYARAHCVDEAEALFERMPERNIVSWNTMLEAYTTVGRVQDAYALFNSM 157

Query: 189 KERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGE 368
             R+  +W  L+    + G  E A +VF +M +  V     ++ +++S +    +  E  
Sbjct: 158 PVRDCGSWNILLAALVRSGNLEKACQVFERMPARDVM----SWTTMVSGLARNGSVDEAR 213

Query: 369 QIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
            +   + K     +    +A+IS Y++   I  A  +F     +D+ +WN
Sbjct: 214 VLFDAMPKR----NVVSWNAMISGYARNHRIEEALDLFTKMPVRDVASWN 259



 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 47/175 (26%), Positives = 99/175 (56%), Gaps = 2/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERM-PERDLPSWNTMITGFIQNGDLERAKELF 179
           P+R+VVSW AM+  Y +   L EA  LF+R    R++ +W  +++G+ +   ++ A+ LF
Sbjct: 64  PDRDVVSWTAMVAAYVRQGMLREARALFDRPDARRNVVTWTALMSGYARAHCVDEAEALF 123

Query: 180 DGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQ 359
           + M ERN+V+W T++  Y   G+ + A+ +F+ M       + G++  +L+A+      +
Sbjct: 124 ERMPERNIVSWNTMLEAYTTVGRVQDAYALFNSM----PVRDCGSWNILLAALVRSGNLE 179

Query: 360 EGEQI-HQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           +  Q+  ++ ++ +  +     + ++S  ++ G +  AR +FD    +++V+WNA
Sbjct: 180 KACQVFERMPARDVMSW-----TTMVSGLARNGSVDEARVLFDAMPKRNVVSWNA 229


>ref|XP_004966624.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Setaria italica]
          Length = 618

 Score =  221 bits (563), Expect = 8e-56
 Identities = 106/172 (61%), Positives = 134/172 (77%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           P RNVVSWNAMI+GY  N R++EALDLF +M  RD  SWN MI GFIQN DL+RA+ELFD
Sbjct: 222 PNRNVVSWNAMISGYIGNHRIDEALDLFMKMNRRDTASWNIMINGFIQNKDLKRARELFD 281

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
              ERNVVTWTT++ GY Q  Q+E+A ++F+ ML++GV PN+ TF+  L A  NLAA  E
Sbjct: 282 KTPERNVVTWTTMMKGYLQGMQSELALRLFNGMLTEGVTPNKVTFLGALDACSNLAALCE 341

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
           G+Q+HQ+I KT FQF  FV+SAL+++YSKCGEI  ARK+FD+S  KDL++WN
Sbjct: 342 GQQVHQMICKTAFQFDTFVESALMNVYSKCGEIGLARKLFDVSREKDLISWN 393



 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 51/173 (29%), Positives = 96/173 (55%), Gaps = 2/173 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERNVVSWN M+  Y    R+++A  LF+RMP RD  SWN ++   ++ G ++ A++LF 
Sbjct: 129 PERNVVSWNTMLEAYVAAGRVDDACTLFDRMPVRDAGSWNILLAALVRAGRVDEARKLFQ 188

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M  R+V+ +TT++TG  + G  + A  +F  M      PN+    +V+S    ++ +  
Sbjct: 189 RMPGRDVMAYTTMVTGIARYGNVDEARVLFDAM------PNR----NVVSWNAMISGYIG 238

Query: 363 GEQIHQIIS--KTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTW 515
             +I + +     + +      + +I+ + +  ++  AR++FD +  +++VTW
Sbjct: 239 NHRIDEALDLFMKMNRRDTASWNIMINGFIQNKDLKRARELFDKTPERNVVTW 291



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
 Frame = +3

Query: 9   RNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFDGM 188
           RNVV+W A+++GY +  R+ EA  LFERMPER++ SWNTM+  ++  G ++ A  LFD M
Sbjct: 100 RNVVTWTALLSGYARARRVEEAEALFERMPERNVVSWNTMLEAYVAAGRVDDACTLFDRM 159

Query: 189 KERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGE 368
             R+  +W  L+    + G+ + A K+F +M    V      + ++++ I       E  
Sbjct: 160 PVRDAGSWNILLAALVRAGRVDEARKLFQRMPGRDVM----AYTTMVTGIARYGNVDEAR 215

Query: 369 QIHQII-SKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWN 518
            +   + ++ +  +     +A+IS Y     I  A  +F   N +D  +WN
Sbjct: 216 VLFDAMPNRNVVSW-----NAMISGYIGNHRIDEALDLFMKMNRRDTASWN 261



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 47/174 (27%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERM-PERDLPSWNTMITGFIQNGDLERAKELF 179
           P+R+VV+W AM++ Y +   L +A  LF+     R++ +W  +++G+ +   +E A+ LF
Sbjct: 66  PDRDVVAWTAMVSAYARRGMLRDARALFDHPDARRNVVTWTALLSGYARARRVEEAEALF 125

Query: 180 DGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQ 359
           + M ERNVV+W T++  Y   G+ + A  +F +M       + G++  +L+A+       
Sbjct: 126 ERMPERNVVSWNTMLEAYVAAGRVDDACTLFDRM----PVRDAGSWNILLAALVRAGRVD 181

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           E  ++ Q +            + +++  ++ G +  AR +FD   N+++V+WNA
Sbjct: 182 EARKLFQRMPGR----DVMAYTTMVTGIARYGNVDEARVLFDAMPNRNVVSWNA 231



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 40/199 (20%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLP----------------------- 113
           PERNVV+W  M+ GY Q ++   AL LF  M    +                        
Sbjct: 284 PERNVVTWTTMMKGYLQGMQSELALRLFNGMLTEGVTPNKVTFLGALDACSNLAALCEGQ 343

Query: 114 -----------SWNTMITGFIQN-----GDLERAKELFDGMKERNVVTWTTLITGYEQDG 245
                       ++T +   + N     G++  A++LFD  +E+++++W  +I  Y   G
Sbjct: 344 QVHQMICKTAFQFDTFVESALMNVYSKCGEIGLARKLFDVSREKDLISWNGIIAAYAHHG 403

Query: 246 QNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQEGEQIHQ-IISKTIFQFSPFVQ 422
               A +++ KM  +G KPN  T+V +LSA  +     +G +I + ++            
Sbjct: 404 VALEAIRLYDKMQENGYKPNDVTYVVLLSACSHSGLVDDGLKIFESMVKDRSVAVRDEHY 463

Query: 423 SALISMYSKCGEIFTARKM 479
           ++LI + S+ G +  A+++
Sbjct: 464 TSLIDLCSRAGRLDDAKRL 482


>ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutrema salsugineum]
           gi|557111828|gb|ESQ52112.1| hypothetical protein
           EUTSA_v10016379mg [Eutrema salsugineum]
          Length = 626

 Score =  218 bits (556), Expect = 5e-55
 Identities = 105/176 (59%), Positives = 138/176 (78%), Gaps = 3/176 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERN +SWNAMITGY  N R+ EA  LF+ MPER+  SWNTMITGFI+NG++ RA  LFD
Sbjct: 228 PERNTISWNAMITGYAHNNRIEEADQLFQVMPERNFASWNTMITGFIRNGEINRACGLFD 287

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDG-VKPNQGTFVSVLSAICNLAAFQ 359
            M ++NV++WTT+ITGY Q+ +NE A KVFS ML DG VKPN+GT+VS+LSA  ++A   
Sbjct: 288 RMPQKNVISWTTMITGYVQNKENEDALKVFSNMLRDGCVKPNEGTYVSILSACSDMAGLV 347

Query: 360 EGEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFD--LSNNKDLVTWNA 521
           EG+QIHQ+ISK++ Q +  V SA+I+MYSKCGE+  ARK+FD  L + +DL++WN+
Sbjct: 348 EGQQIHQLISKSVHQRNELVTSAIINMYSKCGELIAARKIFDAGLVSQRDLISWNS 403



 Score =  107 bits (267), Expect = 2e-21
 Identities = 57/171 (33%), Positives = 102/171 (59%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPERDLPSWNTMITGFIQNGDLERAKELFD 182
           PERN VSWN MI GY Q+ R+++AL+LF+ MPER+  SWNT+I    Q G ++ A  LF+
Sbjct: 135 PERNEVSWNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTLIKALAQLGRIQEAMNLFE 194

Query: 183 GMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQE 362
            M  R+V++WT ++ G  ++G+ + A +VF  M     + N  ++ ++++   +    +E
Sbjct: 195 RMPTRDVISWTAMVDGLGKNGKVDEARRVFDCM----PERNTISWNAMITGYAHNNRIEE 250

Query: 363 GEQIHQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTW 515
            +Q+ Q++ +  F       + +I+ + + GEI  A  +FD    K++++W
Sbjct: 251 ADQLFQVMPERNFA----SWNTMITGFIRNGEINRACGLFDRMPQKNVISW 297



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 49/175 (28%), Positives = 98/175 (56%), Gaps = 2/175 (1%)
 Frame = +3

Query: 3   PERNVVSWNAMITGYTQNLRLNEALDLFERMPER-DLPSWNTMITGFIQNGDLERAKELF 179
           P+R+  +W  +ITGY +   + EA +LF+R   R ++ +W  M++G+++      A+ LF
Sbjct: 72  PQRDEYTWTDVITGYIKLGNMREARELFDRADARKNVVTWTAMVSGYLRAKQFSAAEMLF 131

Query: 180 DGMKERNVVTWTTLITGYEQDGQNEVAFKVFSKMLSDGVKPNQGTFVSVLSAICNLAAFQ 359
             M ERN V+W T+I GY Q G+ + A ++F +M     + N  ++ +++ A+  L   Q
Sbjct: 132 QEMPERNEVSWNTMIDGYAQSGRIDKALELFDEM----PERNTVSWNTLIKALAQLGRIQ 187

Query: 360 EGEQI-HQIISKTIFQFSPFVQSALISMYSKCGEIFTARKMFDLSNNKDLVTWNA 521
           E   +  ++ ++ +  +     +A++    K G++  AR++FD    ++ ++WNA
Sbjct: 188 EAMNLFERMPTRDVISW-----TAMVDGLGKNGKVDEARRVFDCMPERNTISWNA 237


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