BLASTX nr result
ID: Stemona21_contig00031977
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00031977
(532 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P08705.1|RBS_HELAN RecName: Full=Ribulose bisphosphate carbox... 73 6e-18
gb|ABS57004.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 73 6e-18
sp|Q39744.1|RBS2_FLAPR RecName: Full=Ribulose bisphosphate carbo... 73 1e-17
gb|AAK16227.1|AF044395_1 ribulose-1,5-bisphosphate carboxylase s... 72 1e-17
sp|Q39746.1|RBS4_FLAPR RecName: Full=Ribulose bisphosphate carbo... 73 2e-17
sp|Q39749.1|RBS7_FLAPR RecName: Full=Ribulose bisphosphate carbo... 73 2e-17
sp|Q39745.1|RBS3_FLAPR RecName: Full=Ribulose bisphosphate carbo... 73 2e-17
sp|Q39747.1|RBS5_FLAPR RecName: Full=Ribulose bisphosphate carbo... 73 2e-17
gb|AAK16228.1|AF044396_1 ribulose-1,5-bisphosphate carboxylase s... 73 2e-17
sp|Q39743.1|RBS1_FLAPR RecName: Full=Ribulose bisphosphate carbo... 73 2e-17
gb|AAP31053.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 73 2e-17
gb|AFK42721.1| unknown [Lotus japonicus] 68 6e-17
gb|AFK48034.1| unknown [Lotus japonicus] 68 6e-17
emb|CAH59404.1| Rubisco SSU [Plantago major] 72 6e-17
ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase... 69 8e-17
ref|XP_006663961.1| PREDICTED: ribulose bisphosphate carboxylase... 69 8e-17
gb|ACO35888.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 69 1e-16
sp|P07089.1|RBS_FLATR RecName: Full=Ribulose bisphosphate carbox... 70 1e-16
gb|AAP31054.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 70 1e-16
gb|AHC28978.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 71 1e-16
>sp|P08705.1|RBS_HELAN RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|18808|emb|CAA68490.1| ribulose bisphosphate
carboxylase [Helianthus annuus]
gi|755735|emb|CAA28737.1| RuBisCO (SSU) [Helianthus
annuus]
Length = 178
Score = 72.8 bits (177), Expect(2) = 6e-18
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYRENARSPGYYDG Y TMWK PMFGCTD+ QVM+
Sbjct: 104 GFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 140
Score = 43.5 bits (101), Expect(2) = 6e-18
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP A++R+IGFDNV QVQ + F+ASR GY
Sbjct: 149 YPQAWIRIIGFDNVRQVQCIMFIASRPDGY 178
>gb|ABS57004.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[synthetic construct]
Length = 129
Score = 72.8 bits (177), Expect(2) = 6e-18
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYRENARSPGYYDG Y TMWK PMFGCTD+ QVM+
Sbjct: 49 GFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 85
Score = 43.5 bits (101), Expect(2) = 6e-18
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP A++R+IGFDNV QVQ + F+ASR GY
Sbjct: 94 YPQAWIRIIGFDNVRQVQCIMFIASRPDGY 123
>sp|Q39744.1|RBS2_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor gi|967221|gb|AAB67846.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit protein [Flaveria pringlei]
Length = 178
Score = 72.8 bits (177), Expect(2) = 1e-17
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYRENARSPGYYDG Y TMWK PMFGCTD+ QVM+
Sbjct: 104 GFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 140
Score = 42.4 bits (98), Expect(2) = 1e-17
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP A++R+IGFDNV QVQ + F+AS+ G+
Sbjct: 149 YPQAWIRIIGFDNVRQVQCISFIASKPEGF 178
>gb|AAK16227.1|AF044395_1 ribulose-1,5-bisphosphate carboxylase small subunit R1 [Flaveria
ramosissima]
Length = 131
Score = 71.6 bits (174), Expect(2) = 1e-17
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMRARG 410
GFVYREN RSPGYYDG Y TMWK PMFGCTD+ QVM+ G
Sbjct: 57 GFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVMKELG 96
Score = 43.5 bits (101), Expect(2) = 1e-17
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP A++R+IGFDNV QVQ + F+AS+ GY
Sbjct: 102 YPQAWIRIIGFDNVRQVQCISFIASKPDGY 131
>sp|Q39746.1|RBS4_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
chloroplastic; Short=RuBisCO small subunit 4; Flags:
Precursor gi|967225|gb|AAB67848.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit protein [Flaveria pringlei]
Length = 178
Score = 72.8 bits (177), Expect(2) = 2e-17
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYRENARSPGYYDG Y TMWK PMFGCTD+ QVM+
Sbjct: 104 GFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 140
Score = 42.0 bits (97), Expect(2) = 2e-17
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP A++R+IGFDNV QVQ + F+AS+ G+
Sbjct: 149 YPQAWIRIIGFDNVRQVQCISFIASKPDGF 178
>sp|Q39749.1|RBS7_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 7,
chloroplastic; Short=RuBisCO small subunit 7; Flags:
Precursor gi|967231|gb|AAB67851.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit protein [Flaveria pringlei]
Length = 173
Score = 72.8 bits (177), Expect(2) = 2e-17
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYRENARSPGYYDG Y TMWK PMFGCTD+ QVM+
Sbjct: 99 GFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 135
Score = 42.0 bits (97), Expect(2) = 2e-17
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP A++R+IGFDNV QVQ + F+AS+ G+
Sbjct: 144 YPQAWIRIIGFDNVRQVQCISFIASKPDGF 173
>sp|Q39745.1|RBS3_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 3,
chloroplastic; Short=RuBisCO small subunit 3; Flags:
Precursor gi|967223|gb|AAB67847.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit protein [Flaveria pringlei]
Length = 173
Score = 72.8 bits (177), Expect(2) = 2e-17
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYRENARSPGYYDG Y TMWK PMFGCTD+ QVM+
Sbjct: 99 GFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 135
Score = 42.0 bits (97), Expect(2) = 2e-17
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP A++R+IGFDNV QVQ + F+AS+ G+
Sbjct: 144 YPQAWIRIIGFDNVRQVQCISFIASKPDGF 173
>sp|Q39747.1|RBS5_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 5,
chloroplastic; Short=RuBisCO small subunit 5; Flags:
Precursor gi|967227|gb|AAB67849.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit protein [Flaveria pringlei]
Length = 173
Score = 72.8 bits (177), Expect(2) = 2e-17
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYRENARSPGYYDG Y TMWK PMFGCTD+ QVM+
Sbjct: 99 GFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 135
Score = 42.0 bits (97), Expect(2) = 2e-17
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP A++R+IGFDNV QVQ + F+AS+ G+
Sbjct: 144 YPQAWIRIIGFDNVRQVQCISFIASKPDGF 173
>gb|AAK16228.1|AF044396_1 ribulose-1,5-bisphosphate carboxylase small subunit R2 [Flaveria
ramosissima]
Length = 131
Score = 72.8 bits (177), Expect(2) = 2e-17
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYRENARSPGYYDG Y TMWK PMFGCTD+ QVM+
Sbjct: 57 GFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 93
Score = 42.0 bits (97), Expect(2) = 2e-17
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP A++R+IGFDNV QVQ + F+AS+ G+
Sbjct: 102 YPQAWIRIIGFDNVRQVQCISFIASKPDGF 131
>sp|Q39743.1|RBS1_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 1,
chloroplastic; Short=RuBisCO small subunit 1; Flags:
Precursor gi|967219|gb|AAB67845.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit protein [Flaveria pringlei]
Length = 173
Score = 72.8 bits (177), Expect(2) = 2e-17
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYRENARSPGYYDG Y TMWK PMFGCTD+ QVM+
Sbjct: 99 GFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 135
Score = 41.6 bits (96), Expect(2) = 2e-17
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP A++R+IGFDNV QVQ + F+AS+ G+
Sbjct: 144 YPQAWIRIIGFDNVRQVQCISFIASKPGGF 173
>gb|AAP31053.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Flaveria bidentis]
Length = 173
Score = 72.8 bits (177), Expect(2) = 2e-17
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYRENARSPGYYDG Y TMWK PMFGCTD+ QVM+
Sbjct: 99 GFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 135
Score = 41.6 bits (96), Expect(2) = 2e-17
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP A++R+IGFDNV QVQ + F+AS+ G+
Sbjct: 144 YPQAWIRIIGFDNVRQVQCVSFIASKPTGF 173
>gb|AFK42721.1| unknown [Lotus japonicus]
Length = 182
Score = 67.8 bits (164), Expect(2) = 6e-17
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYREN +SPGYYDG Y TMWK PMFGC+DA QV++
Sbjct: 108 GFVYRENHKSPGYYDGRYWTMWKLPMFGCSDAAQVLK 144
Score = 45.1 bits (105), Expect(2) = 6e-17
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP+AFVR+IGFDNV QVQ + F+A R GY
Sbjct: 153 YPNAFVRIIGFDNVRQVQCISFIAHRPAGY 182
>gb|AFK48034.1| unknown [Lotus japonicus]
Length = 181
Score = 67.8 bits (164), Expect(2) = 6e-17
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYREN +SPGYYDG Y TMWK PMFGC+DA QV++
Sbjct: 107 GFVYRENHKSPGYYDGRYWTMWKLPMFGCSDATQVLK 143
Score = 45.1 bits (105), Expect(2) = 6e-17
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP+AFVR+IGFDNV QVQ + F+A R GY
Sbjct: 152 YPNAFVRIIGFDNVRQVQCISFIAHRPAGY 181
>emb|CAH59404.1| Rubisco SSU [Plantago major]
Length = 174
Score = 71.6 bits (174), Expect(2) = 6e-17
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVM 422
GFVYRENARSPGYYDG Y TMWK PMFGCTDA QV+
Sbjct: 100 GFVYRENARSPGYYDGRYWTMWKLPMFGCTDASQVI 135
Score = 41.2 bits (95), Expect(2) = 6e-17
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHG 310
YP+A+VR+IGFDNV QVQ + F+AS+ G
Sbjct: 145 YPNAWVRIIGFDNVRQVQCISFIASKPPG 173
>ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 182
Score = 69.3 bits (168), Expect(2) = 8e-17
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYREN +SPGYYDG Y TMWK PMFGCTDA QV++
Sbjct: 108 GFVYRENHKSPGYYDGRYWTMWKLPMFGCTDASQVLK 144
Score = 43.1 bits (100), Expect(2) = 8e-17
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP+AF+R+IGFDNV QVQ + F+A + GY
Sbjct: 153 YPNAFIRIIGFDNVRQVQCISFIAYKPAGY 182
>ref|XP_006663961.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Oryza brachyantha]
Length = 182
Score = 68.9 bits (167), Expect(2) = 8e-17
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYREN RSPGYYDG Y TMWK PMFGC+DA QV++
Sbjct: 95 GFVYRENHRSPGYYDGRYWTMWKLPMFGCSDATQVLK 131
Score = 43.5 bits (101), Expect(2) = 8e-17
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGYAPKGSRG 286
YP AFVR+IGFDNV QVQ + F+A Y P GS G
Sbjct: 140 YPDAFVRIIGFDNVRQVQCISFIA-----YKPPGSEG 171
>gb|ACO35888.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Ageratina adenophora]
Length = 178
Score = 68.6 bits (166), Expect(2) = 1e-16
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMRARG 410
GFVYRE+ARSPGYYDG + TMWK PMFGCTD+ QV++ G
Sbjct: 104 GFVYREHARSPGYYDGRHWTMWKLPMFGCTDSAQVLKEVG 143
Score = 43.5 bits (101), Expect(2) = 1e-16
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP A++R+IGFDNV QVQ + F+AS+ GY
Sbjct: 149 YPQAWIRIIGFDNVRQVQCISFIASKPDGY 178
>sp|P07089.1|RBS_FLATR RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|18466|emb|CAA28711.1| unnamed protein
product [Flaveria trinervia]
Length = 173
Score = 70.5 bits (171), Expect(2) = 1e-16
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYRENA SPGYYDG Y TMWK PMFGCTD+ QVM+
Sbjct: 99 GFVYRENASSPGYYDGRYWTMWKLPMFGCTDSAQVMK 135
Score = 41.6 bits (96), Expect(2) = 1e-16
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP A++R+IGFDNV QVQ + F+AS+ G+
Sbjct: 144 YPQAWIRIIGFDNVRQVQCVSFIASKPTGF 173
>gb|AAP31054.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Flaveria bidentis]
Length = 173
Score = 70.5 bits (171), Expect(2) = 1e-16
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYRENA SPGYYDG Y TMWK PMFGCTD+ QVM+
Sbjct: 99 GFVYRENASSPGYYDGRYWTMWKLPMFGCTDSAQVMK 135
Score = 41.6 bits (96), Expect(2) = 1e-16
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGY 307
YP A++R+IGFDNV QVQ + F+AS+ G+
Sbjct: 144 YPQAWIRIIGFDNVRQVQCVSFIASKPTGF 173
>gb|AHC28978.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Phragmites australis]
gi|565824427|gb|AHC28979.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Phragmites australis]
Length = 171
Score = 71.2 bits (173), Expect(2) = 1e-16
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = -1
Query: 529 GFVYRENARSPGYYDGSY*TMWKQPMFGCTDARQVMR 419
GFVYREN RSPGYYDG Y TMWK PMFGCTDA QV++
Sbjct: 91 GFVYRENGRSPGYYDGRYWTMWKLPMFGCTDATQVLK 127
Score = 40.8 bits (94), Expect(2) = 1e-16
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -2
Query: 396 YPHAFVRVIGFDNVGQVQRMGFLASRKHGYAPKG 295
YP AFVR+IGFDNV QVQ + F+A + G G
Sbjct: 136 YPDAFVRIIGFDNVRQVQCISFIAYKPPGCEESG 169