BLASTX nr result

ID: Stemona21_contig00031787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00031787
         (573 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168533.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...   117   5e-29
ref|NP_178797.2| 60S ribosomal protein L2-like protein [Arabidop...   100   1e-24
ref|XP_004152990.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...    97   2e-23
ref|XP_004253315.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...    99   2e-20
ref|XP_006401951.1| hypothetical protein EUTSA_v10013769mg [Eutr...   100   4e-19
ref|XP_006829247.1| hypothetical protein AMTR_s00001p00272560 [A...    68   2e-09

>ref|XP_004168533.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L2,
           mitochondrial-like [Cucumis sativus]
          Length = 455

 Score =  117 bits (292), Expect(3) = 5e-29
 Identities = 55/63 (87%), Positives = 56/63 (88%)
 Frame = -2

Query: 308 KHLIGERGNTHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEGKLFELSPPAA 129
           K LIGERG  HEAPAEREGLPGRMPMGAGFFEKARADSETWDLGL  NEG+LF LSPP A
Sbjct: 326 KDLIGERGKAHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLGRNEGELFSLSPPVA 385

Query: 128 YVV 120
           YVV
Sbjct: 386 YVV 388



 Score = 35.0 bits (79), Expect(3) = 5e-29
 Identities = 17/26 (65%), Positives = 19/26 (73%)
 Frame = -1

Query: 375 RGQMARQKAIRPCGSSRSIAHIQTSD 298
           R + +  KAIRP GSSRSIAHIQ  D
Sbjct: 302 REERSNGKAIRPFGSSRSIAHIQXKD 327



 Score = 21.9 bits (45), Expect(3) = 5e-29
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -3

Query: 388 LTRE*RSNGKA 356
           LTRE RSNGKA
Sbjct: 300 LTREERSNGKA 310


>ref|NP_178797.2| 60S ribosomal protein L2-like protein [Arabidopsis thaliana]
           gi|330251006|gb|AEC06100.1| 60S ribosomal protein L2
           [Arabidopsis thaliana]
          Length = 389

 Score =  100 bits (249), Expect(4) = 1e-24
 Identities = 46/48 (95%), Positives = 47/48 (97%)
 Frame = -2

Query: 305 HLIGERGNTHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNE 162
           +LIGERGNTHEAP EREGLPGRMPMGAGFFEKARADSETWDLGLATNE
Sbjct: 330 YLIGERGNTHEAPTEREGLPGRMPMGAGFFEKARADSETWDLGLATNE 377



 Score = 34.3 bits (77), Expect(4) = 1e-24
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = -1

Query: 375 RGQMARQKAIRPCGSSRSIAHIQTS 301
           R + +  KAIRP GSSRSIAHIQ S
Sbjct: 305 REERSNGKAIRPFGSSRSIAHIQIS 329



 Score = 22.3 bits (46), Expect(4) = 1e-24
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -3

Query: 154 SSSFLRQRLM 125
           SSSFLRQRLM
Sbjct: 380 SSSFLRQRLM 389



 Score = 21.9 bits (45), Expect(4) = 1e-24
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -3

Query: 388 LTRE*RSNGKA 356
           LTRE RSNGKA
Sbjct: 303 LTREERSNGKA 313


>ref|XP_004152990.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L2,
           mitochondrial-like [Cucumis sativus]
          Length = 386

 Score = 97.1 bits (240), Expect(3) = 2e-23
 Identities = 45/50 (90%), Positives = 45/50 (90%)
 Frame = -2

Query: 308 KHLIGERGNTHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLATNEG 159
           K LIGERG  HEAPAEREGLPGRMPMGAGFFEKARADSETWDLGL  NEG
Sbjct: 326 KDLIGERGKAHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGLGRNEG 375



 Score = 35.0 bits (79), Expect(3) = 2e-23
 Identities = 17/26 (65%), Positives = 19/26 (73%)
 Frame = -1

Query: 375 RGQMARQKAIRPCGSSRSIAHIQTSD 298
           R + +  KAIRP GSSRSIAHIQ  D
Sbjct: 302 REERSNGKAIRPFGSSRSIAHIQXKD 327



 Score = 22.7 bits (47), Expect(3) = 2e-23
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -3

Query: 169 RMKGSSSSFLRQRLM 125
           R +GSSS FLRQ LM
Sbjct: 372 RNEGSSSRFLRQWLM 386


>ref|XP_004253315.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L2,
           mitochondrial-like, partial [Solanum lycopersicum]
          Length = 366

 Score = 98.6 bits (244), Expect(2) = 2e-20
 Identities = 48/65 (73%), Positives = 51/65 (78%)
 Frame = -2

Query: 353 RPYARVAPRGV*LTSKHLIGERGNTHEAPAEREGLPGRMPMGAGFFEKARADSETWDLGL 174
           RP+   + R +     HLIGERGN HEAPAEREGLPGRMPMGAGFFEKARADSETWD GL
Sbjct: 293 RPFG--SSRSIAHIQXHLIGERGNAHEAPAEREGLPGRMPMGAGFFEKARADSETWDPGL 350

Query: 173 ATNEG 159
             NEG
Sbjct: 351 VMNEG 355



 Score = 26.6 bits (57), Expect(2) = 2e-20
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -3

Query: 163 KGSSSSFLRQRLM 125
           +GSSSSFLRQRLM
Sbjct: 354 EGSSSSFLRQRLM 366


>ref|XP_006401951.1| hypothetical protein EUTSA_v10013769mg [Eutrema salsugineum]
           gi|557103041|gb|ESQ43404.1| hypothetical protein
           EUTSA_v10013769mg [Eutrema salsugineum]
          Length = 389

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 50/77 (64%), Positives = 57/77 (74%), Gaps = 5/77 (6%)
 Frame = -2

Query: 377 IEVKWQGKRPYARVAPRGV*LTSKH-----LIGERGNTHEAPAEREGLPGRMPMGAGFFE 213
           +++ W+ +     + P G   +  H     LIGERGNTHEAPAEREGL GRMPMGAGFFE
Sbjct: 301 VDLTWEERSNGKAIRPFGSSRSIAHIQISYLIGERGNTHEAPAEREGLQGRMPMGAGFFE 360

Query: 212 KARADSETWDLGLATNE 162
           KARADSETWDLGLATNE
Sbjct: 361 KARADSETWDLGLATNE 377


>ref|XP_006829247.1| hypothetical protein AMTR_s00001p00272560 [Amborella trichopoda]
           gi|548834226|gb|ERM96663.1| hypothetical protein
           AMTR_s00001p00272560 [Amborella trichopoda]
          Length = 62

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = -2

Query: 233 MGAGFFEKARADSETWDLGLATNEGKLFELSPPAAYVVVGQLKL 102
           M AGFFEK RADSET DL +ATNEG+L ELSPPAAY VVG +K+
Sbjct: 1   MSAGFFEKVRADSETRDLSIATNEGQLKELSPPAAYYVVGLIKV 44


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