BLASTX nr result
ID: Stemona21_contig00030942
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00030942
(267 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr... 144 9e-33
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 140 1e-31
gb|AAU44091.1| putative polyprotein [Oryza sativa Japonica Group] 140 2e-31
gb|AAR01736.1| putative Gag and Pol polyprotein [Oryza sativa Ja... 140 2e-31
gb|AAN64998.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 139 3e-31
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s... 139 3e-31
gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subc... 139 3e-31
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc... 139 3e-31
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc... 139 3e-31
gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subc... 139 3e-31
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc... 139 3e-31
gb|ABA93737.1| retrotransposon protein, putative, Ty1-copia subc... 139 3e-31
gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-... 139 3e-31
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-... 139 3e-31
gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Jap... 139 3e-31
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group] 139 3e-31
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group] 139 3e-31
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group] 139 3e-31
emb|CAE02261.2| OSJNBb0058J09.8 [Oryza sativa Japonica Group] 139 3e-31
emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group] gi... 139 3e-31
>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 1034
Score = 144 bits (364), Expect = 9e-33
Identities = 65/89 (73%), Positives = 77/89 (86%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW LTDLP G K L CKWIFKKK++ DGT++K+KARLV QGFRQK GIDYFDTYAPV RI
Sbjct: 789 TWFLTDLPPGCKPLACKWIFKKKIKVDGTIDKFKARLVVQGFRQKEGIDYFDTYAPVVRI 848
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
++IR+++ LASIH L++HQMD KTAFLNG
Sbjct: 849 SSIRLLIGLASIHNLVIHQMDVKTAFLNG 877
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 140 bits (354), Expect = 1e-31
Identities = 65/89 (73%), Positives = 75/89 (84%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW L DLP G K +GCKWIFKKK DG++EKYKARLVA+GF QK IDYFDT+APV RI
Sbjct: 800 TWTLVDLPKGAKPIGCKWIFKKKYHPDGSIEKYKARLVAKGFTQKHNIDYFDTFAPVTRI 859
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
++IRV+LALASIHKL++HQMD KT FLNG
Sbjct: 860 SSIRVLLALASIHKLVIHQMDVKTTFLNG 888
>gb|AAU44091.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1117
Score = 140 bits (352), Expect = 2e-31
Identities = 65/89 (73%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW + + P+G K++GCKWIFKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 636 TWEVVERPYGCKSVGCKWIFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 695
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+LALA+ H LLVHQMD KTAFLNG
Sbjct: 696 TTIRVLLALAASHGLLVHQMDVKTAFLNG 724
>gb|AAR01736.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
gi|108709997|gb|ABF97792.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1177
Score = 140 bits (352), Expect = 2e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 747 TWEVTEQPYGYKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 806
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 807 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 835
>gb|AAN64998.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108707933|gb|ABF95728.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1040
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 710 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 769
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 770 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 798
>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 822 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 881
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 882 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 910
>gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1468
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 909 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 968
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 969 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 997
>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 822 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 881
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 882 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 910
>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1095
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 615 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 674
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 675 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 703
>gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2027
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 1017 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 1076
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 1077 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 1105
>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 822 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 881
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 882 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 910
>gb|ABA93737.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1579
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 1081 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 1140
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 1141 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 1169
>gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 713
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 215 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 274
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 275 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 303
>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1320
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 822 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 881
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 882 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 910
>gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Japonica Group]
Length = 1308
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 822 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 881
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 882 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 910
>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
Length = 1319
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 822 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 881
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 882 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 910
>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
Length = 1314
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 794 TWEVTEQPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 853
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 854 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 882
>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
Length = 1319
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 822 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 881
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 882 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 910
>emb|CAE02261.2| OSJNBb0058J09.8 [Oryza sativa Japonica Group]
Length = 1282
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 703 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 762
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 763 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 791
>emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group]
gi|38345937|emb|CAD41412.2| OSJNBb0078D11.12 [Oryza
sativa Japonica Group]
Length = 1320
Score = 139 bits (351), Expect = 3e-31
Identities = 64/89 (71%), Positives = 78/89 (87%)
Frame = +1
Query: 1 TWILTDLPHGNKALGCKWIFKKKLRTDGTVEKYKARLVAQGFRQKAGIDYFDTYAPVARI 180
TW +T+ P+G K +GCKW+FKKKLR DGT+EKYKARLVA+G+ QK G D+FDTY+PVAR+
Sbjct: 822 TWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARL 881
Query: 181 TTIRVVLALASIHKLLVHQMDKKTAFLNG 267
TTIRV+L+LA+ H LLVHQMD KTAFLNG
Sbjct: 882 TTIRVLLSLAASHGLLVHQMDVKTAFLNG 910