BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00029364
         (523 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE02382.2| OSJNBb0080H08.8 [Oryza sativa Japonica Group]         108   2e-28
gb|ABG66099.1| retrotransposon protein, putative, Ty1-copia subc...   112   2e-28
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]        110   1e-27
gb|AAX95047.1| retrotransposon protein, putative, Ty1-copia sub-...   110   1e-27
gb|ABG22406.1| retrotransposon protein, putative, Ty1-copia subc...   110   1e-27
gb|AAU44091.1| putative polyprotein [Oryza sativa Japonica Group]     106   1e-27
gb|ABA93790.1| retrotransposon protein, putative, Ty1-copia subc...   107   2e-27
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...   107   2e-27
emb|CAE02929.3| OSJNBa0014K14.1 [Oryza sativa Japonica Group]         112   2e-27
emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]         110   3e-27
gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subc...   110   3e-27
gb|AAU90206.1| putative polyprotein [Oryza sativa Japonica Group]     111   3e-27
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...   110   4e-27
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]         110   4e-27
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         110   4e-27
emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]           107   5e-27
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               103   5e-27
gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subc...   110   5e-27
gb|AAS01934.1| putative Integrase core domain containing protein...   110   5e-27
gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subc...   107   7e-27

>emb|CAE02382.2| OSJNBb0080H08.8 [Oryza sativa Japonica Group]
          Length = 1183

 Score =  108 bits (269), Expect(2) = 2e-28
 Identities = 51/119 (42%), Positives = 78/119 (65%)
 Frame = -1

Query: 508  YCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEFELITL 329
            Y G+  +LE  SD+NW++D+ ++K+T G++F LG   ++W   KQTI+  +T+E EL  L
Sbjct: 1019 YTGYPKVLEGYSDSNWISDADEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTAL 1078

Query: 328  NCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILMRFST 152
            + A +E EWLR LL  +P+V  PMP+I M CD+++VI  +N S  N K + HI  R  +
Sbjct: 1079 DTATVEAEWLRELLMDLPMVEKPMPAILMNCDNQTVIIKVNSSKDNMKSSRHIKRRLKS 1137



 Score = 43.1 bits (100), Expect(2) = 2e-28
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = -2

Query: 153  RNKNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKP 25
            + KN  VI+L + ++ KNLADQ T+GL +  +  +SR MGLKP
Sbjct: 1140 KQKNSGVIALDYVQTAKNLADQFTKGLPRNVIDSASREMGLKP 1182


>gb|ABG66099.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 591

 Score =  112 bits (279), Expect(2) = 2e-28
 Identities = 53/124 (42%), Positives = 81/124 (65%)
 Frame = -1

Query: 523 DLSLCYCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEF 344
           +L L Y G+  +LE  SD+NW++D  ++K+T G++  LG   ++W F KQTI+  +T+E 
Sbjct: 422 ELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVLTLGGGAVSWRFCKQTILTRSTMEV 481

Query: 343 ELITLNCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILM 164
           EL  L+ A IE EWLR+LL  +PIV  P+P+I M CD+++VI  +N S  N K + H+  
Sbjct: 482 ELTALDTATIEAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKR 541

Query: 163 RFST 152
           R  +
Sbjct: 542 RLKS 545



 Score = 39.3 bits (90), Expect(2) = 2e-28
 Identities = 18/42 (42%), Positives = 31/42 (73%)
 Frame = -2

Query: 147 KNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKPI 22
           KN  VI+L + ++ +NLAD  T+GL +T + ++S+ MGL+P+
Sbjct: 550 KNSRVITLDYIQTARNLADPFTKGLSRTVIDKASKEMGLRPM 591


>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
          Length = 1314

 Score =  110 bits (274), Expect(2) = 1e-27
 Identities = 51/124 (41%), Positives = 81/124 (65%)
 Frame = -1

Query: 523  DLSLCYCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEF 344
            +L L Y G+  +LE  SD+NW++D  ++K+T G++F LG   ++W   KQTI+  +T+E 
Sbjct: 1105 ELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEA 1164

Query: 343  ELITLNCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILM 164
            EL  L+ A +E EWLR+LL  +P+V  P+P+I M CD+++VI  +N S  N K + H+  
Sbjct: 1165 ELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKR 1224

Query: 163  RFST 152
            R  +
Sbjct: 1225 RLKS 1228



 Score = 38.9 bits (89), Expect(2) = 1e-27
 Identities = 18/43 (41%), Positives = 30/43 (69%)
 Frame = -2

Query: 147  KNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKPIK 19
            +N  VI+L + ++ +NLAD  T+GL +  +  +S+ MGL+PIK
Sbjct: 1233 RNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPIK 1275


>gb|AAX95047.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 2266

 Score =  110 bits (276), Expect(2) = 1e-27
 Identities = 52/124 (41%), Positives = 82/124 (66%)
 Frame = -1

Query: 523  DLSLCYCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEF 344
            +L L Y G+ ++LE  SD+NW++D  ++K+T G++F LG   ++W   KQTI+  +T+E 
Sbjct: 636  ELWLHYSGYPVVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEA 695

Query: 343  ELITLNCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILM 164
            EL  L+ A +E EWLR+LL  +PIV  P+P+I M CD+++VI  +N S  N K + H+  
Sbjct: 696  ELTALDTATVEAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKR 755

Query: 163  RFST 152
            R  +
Sbjct: 756  RLKS 759



 Score = 37.7 bits (86), Expect(2) = 1e-27
 Identities = 18/46 (39%), Positives = 31/46 (67%)
 Frame = -2

Query: 147 KNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKPIK*SP 10
           +N  VI+L + ++ +NLAD  T+GL +  +  +S+ MGL+PI+  P
Sbjct: 764 RNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPIEGYP 809


>gb|ABG22406.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 2188

 Score =  110 bits (276), Expect(2) = 1e-27
 Identities = 52/124 (41%), Positives = 82/124 (66%)
 Frame = -1

Query: 523 DLSLCYCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEF 344
           +L L Y G+ ++LE  SD+NW++D  ++K+T G++F LG   ++W   KQTI+  +T+E 
Sbjct: 558 ELWLHYSGYPVVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEA 617

Query: 343 ELITLNCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILM 164
           EL  L+ A +E EWLR+LL  +PIV  P+P+I M CD+++VI  +N S  N K + H+  
Sbjct: 618 ELTALDTATVEAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKR 677

Query: 163 RFST 152
           R  +
Sbjct: 678 RLKS 681



 Score = 37.7 bits (86), Expect(2) = 1e-27
 Identities = 18/46 (39%), Positives = 31/46 (67%)
 Frame = -2

Query: 147 KNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKPIK*SP 10
           +N  VI+L + ++ +NLAD  T+GL +  +  +S+ MGL+PI+  P
Sbjct: 686 RNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPIEGYP 731


>gb|AAU44091.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1117

 Score =  106 bits (265), Expect(2) = 1e-27
 Identities = 48/119 (40%), Positives = 78/119 (65%)
 Frame = -1

Query: 508  YCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEFELITL 329
            Y G+  +LE  SD+NW++D+ ++K+T G++F LG   ++W   KQTI+  +T+E EL  L
Sbjct: 953  YTGYPKVLEGYSDSNWISDADEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTAL 1012

Query: 328  NCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILMRFST 152
            + A +E EWLR LL  +P++  P+P+I M CD+++VI  +N S  N K + H+  R  +
Sbjct: 1013 DTATVEAEWLRELLMDLPVIEKPVPAILMNCDNQTVIIKVNSSKDNMKSSRHVKRRLKS 1071



 Score = 42.0 bits (97), Expect(2) = 1e-27
 Identities = 20/43 (46%), Positives = 30/43 (69%)
 Frame = -2

Query: 153  RNKNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKP 25
            + KN  VI+L + ++ KNLADQ T+GL +  +  +SR MGL+P
Sbjct: 1074 KQKNSGVIALDYVQTAKNLADQFTKGLPRNVIDSASREMGLRP 1116


>gb|ABA93790.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1370

 Score =  107 bits (268), Expect(2) = 2e-27
 Identities = 48/119 (40%), Positives = 79/119 (66%)
 Frame = -1

Query: 508  YCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEFELITL 329
            Y G+  +LE  SD+NW++D+ ++K+T G++F LG   ++W   KQTI+  +T+E EL +L
Sbjct: 1206 YAGYPKVLEGYSDSNWISDADEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEVELTSL 1265

Query: 328  NCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILMRFST 152
            + A +E EWLR LL  +P+V  P+P+I M CD+++V+  +N S  N K + H+  R  +
Sbjct: 1266 DTATVEAEWLRELLMDLPVVEKPVPAILMNCDNQTVVIKVNSSKDNMKSSRHVKRRLKS 1324



 Score = 40.4 bits (93), Expect(2) = 2e-27
 Identities = 20/43 (46%), Positives = 30/43 (69%)
 Frame = -2

Query: 153  RNKNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKP 25
            + KN  VI+L + ++ KNLADQ T+GL +  +  +SR MGL+P
Sbjct: 1327 KQKNSGVIALDYVQTAKNLADQFTKGLPRNVIDCASREMGLRP 1369


>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  107 bits (267), Expect(2) = 2e-27
 Identities = 49/119 (41%), Positives = 78/119 (65%)
 Frame = -1

Query: 508  YCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEFELITL 329
            Y G+  +LE  SD+NW++D+ ++K+T G++F LG   ++W   KQTI+  +T+E EL  L
Sbjct: 1104 YAGYPKVLEGYSDSNWISDADEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTAL 1163

Query: 328  NCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILMRFST 152
            + A +E EWLR LL  +P+V  P+P+I M CD+++VI  +N S  N K + H+  R  +
Sbjct: 1164 DTATVEAEWLRELLMDLPVVEKPVPAILMNCDNQTVIIKVNSSKDNMKSSRHVKRRLKS 1222



 Score = 40.4 bits (93), Expect(2) = 2e-27
 Identities = 20/43 (46%), Positives = 30/43 (69%)
 Frame = -2

Query: 153  RNKNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKP 25
            + KN  VI+L + ++ KNLADQ T+GL +  +  +SR MGL+P
Sbjct: 1225 KQKNSGVIALDYVQTAKNLADQFTKGLPRNVIDCASREMGLRP 1267


>emb|CAE02929.3| OSJNBa0014K14.1 [Oryza sativa Japonica Group]
          Length = 836

 Score =  112 bits (281), Expect(2) = 2e-27
 Identities = 53/123 (43%), Positives = 83/123 (67%)
 Frame = -1

Query: 523 DLSLCYCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEF 344
           +L L Y G+  +LE  SD+NW++D  ++K+T G++F LG   ++W   KQTI+  +T+E 
Sbjct: 310 ELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEA 369

Query: 343 ELITLNCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILM 164
           EL  L+ A +E EWLR+LL  +PIV  P+P+I M CD+++VI  +N S  N K++ H+ +
Sbjct: 370 ELTALDTATVEAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSSKDNMKLSRHVKL 429

Query: 163 RFS 155
           R S
Sbjct: 430 RNS 432



 Score = 35.0 bits (79), Expect(2) = 2e-27
 Identities = 17/45 (37%), Positives = 29/45 (64%)
 Frame = -2

Query: 156 VRNKNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKPI 22
           V+ +N  VI L +  + +NLAD  T+GL +  +  +S+ MGL+P+
Sbjct: 427 VKLRNSRVIMLDYIPTARNLADPFTKGLSRNVIDNASKEMGLRPM 471


>emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
          Length = 1342

 Score =  110 bits (274), Expect(2) = 3e-27
 Identities = 51/124 (41%), Positives = 81/124 (65%)
 Frame = -1

Query: 523  DLSLCYCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEF 344
            +L L Y G+  +LE  SD+NW++D  ++K+T G++F LG   ++W   KQTI+  +T+E 
Sbjct: 1133 ELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEA 1192

Query: 343  ELITLNCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILM 164
            EL  L+ A +E EWLR+LL  +P+V  P+P+I M CD+++VI  +N S  N K + H+  
Sbjct: 1193 ELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKR 1252

Query: 163  RFST 152
            R  +
Sbjct: 1253 RLKS 1256



 Score = 37.4 bits (85), Expect(2) = 3e-27
 Identities = 17/43 (39%), Positives = 30/43 (69%)
 Frame = -2

Query: 147  KNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKPIK 19
            +N  VI+L + ++ +NLAD  T+GL +  +  +S+ MGL+PI+
Sbjct: 1261 RNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPIE 1303


>gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1284

 Score =  110 bits (274), Expect(2) = 3e-27
 Identities = 52/124 (41%), Positives = 81/124 (65%)
 Frame = -1

Query: 523  DLSLCYCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEF 344
            +L L Y G+  +LE  SD+NW++D  ++K+T G++F LG   ++W   KQTI+  +T+E 
Sbjct: 1028 ELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEA 1087

Query: 343  ELITLNCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILM 164
            EL  L+ A +E EWLR+LL  +PIV  P+P+I M CD+++VI  +N S  N K + H+  
Sbjct: 1088 ELTALDTATVEAEWLRDLLMDLPIVEKPVPAIVMNCDNQTVIVKVNSSKDNMKSSRHVKR 1147

Query: 163  RFST 152
            R  +
Sbjct: 1148 RLKS 1151



 Score = 37.4 bits (85), Expect(2) = 3e-27
 Identities = 17/43 (39%), Positives = 30/43 (69%)
 Frame = -2

Query: 147  KNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKPIK 19
            +N  VI+L + ++ +NLAD  T+GL +  +  +S+ MGL+PI+
Sbjct: 1156 RNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPIE 1198


>gb|AAU90206.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1256

 Score =  111 bits (278), Expect(2) = 3e-27
 Identities = 52/124 (41%), Positives = 81/124 (65%)
 Frame = -1

Query: 523  DLSLCYCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEF 344
            +L L Y G+  +LE  SD NW++D  ++K+T G++F LG   ++W   KQTI+  +T+E 
Sbjct: 1087 ELGLHYSGYSAVLEGYSDFNWISDVDEIKATSGYVFTLGGAAVSWRSCKQTILTRSTMEA 1146

Query: 343  ELITLNCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILM 164
            EL+ L+ A +E EWLR+LL  +PIV  P+P+I M CD+++VI  +N S  N K + H+  
Sbjct: 1147 ELMALDTATVEAEWLRDLLMDLPIVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKR 1206

Query: 163  RFST 152
            R  +
Sbjct: 1207 RLKS 1210



 Score = 35.8 bits (81), Expect(2) = 3e-27
 Identities = 16/42 (38%), Positives = 29/42 (69%)
 Frame = -2

Query: 147  KNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKPI 22
            +N  VI+L + ++ +NLAD  T+GL +  +  +S+ MGL+P+
Sbjct: 1215 RNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPM 1256


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  110 bits (274), Expect(2) = 4e-27
 Identities = 51/124 (41%), Positives = 81/124 (65%)
 Frame = -1

Query: 523  DLSLCYCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEF 344
            +L L Y G+  +LE  SD+NW++D  ++K+T G++F LG   ++W   KQTI+  +T+E 
Sbjct: 1133 ELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEA 1192

Query: 343  ELITLNCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILM 164
            EL  L+ A +E EWLR+LL  +P+V  P+P+I M CD+++VI  +N S  N K + H+  
Sbjct: 1193 ELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNNSKDNMKSSRHVKR 1252

Query: 163  RFST 152
            R  +
Sbjct: 1253 RLKS 1256



 Score = 37.0 bits (84), Expect(2) = 4e-27
 Identities = 17/42 (40%), Positives = 29/42 (69%)
 Frame = -2

Query: 147  KNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKPI 22
            +N  VI+L + ++ +NLAD  T+GL +  +  +S+ MGL+PI
Sbjct: 1261 RNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPI 1302


>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  110 bits (274), Expect(2) = 4e-27
 Identities = 51/124 (41%), Positives = 81/124 (65%)
 Frame = -1

Query: 523  DLSLCYCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEF 344
            +L L Y G+  +LE  SD+NW++D  ++K+T G++F LG   ++W   KQTI+  +T+E 
Sbjct: 1133 ELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEA 1192

Query: 343  ELITLNCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILM 164
            EL  L+ A +E EWLR+LL  +P+V  P+P+I M CD+++VI  +N S  N K + H+  
Sbjct: 1193 ELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKR 1252

Query: 163  RFST 152
            R  +
Sbjct: 1253 RLKS 1256



 Score = 37.0 bits (84), Expect(2) = 4e-27
 Identities = 17/42 (40%), Positives = 29/42 (69%)
 Frame = -2

Query: 147  KNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKPI 22
            +N  VI+L + ++ +NLAD  T+GL +  +  +S+ MGL+PI
Sbjct: 1261 RNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPI 1302


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  110 bits (274), Expect(2) = 4e-27
 Identities = 51/124 (41%), Positives = 81/124 (65%)
 Frame = -1

Query: 523  DLSLCYCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEF 344
            +L L Y G+  +LE  SD+NW++D  ++K+T G++F LG   ++W   KQTI+  +T+E 
Sbjct: 1133 ELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEA 1192

Query: 343  ELITLNCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILM 164
            EL  L+ A +E EWLR+LL  +P+V  P+P+I M CD+++VI  +N S  N K + H+  
Sbjct: 1193 ELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKR 1252

Query: 163  RFST 152
            R  +
Sbjct: 1253 RLKS 1256



 Score = 37.0 bits (84), Expect(2) = 4e-27
 Identities = 17/42 (40%), Positives = 29/42 (69%)
 Frame = -2

Query: 147  KNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKPI 22
            +N  VI+L + ++ +NLAD  T+GL +  +  +S+ MGL+PI
Sbjct: 1261 RNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPI 1302


>emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]
          Length = 1413

 Score =  107 bits (268), Expect(2) = 5e-27
 Identities = 50/119 (42%), Positives = 79/119 (66%)
 Frame = -1

Query: 508  YCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEFELITL 329
            Y G+  +LE  SD+NW++D+ ++K+T G++F LG   ++W   KQTI+  +T+E EL +L
Sbjct: 1249 YTGYPKVLEGYSDSNWISDADEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTSL 1308

Query: 328  NCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILMRFST 152
            + A +E EWLR LL  +P+V  P+P+I M CD+++VI  +N S  N K + HI  R  +
Sbjct: 1309 DTATVEAEWLRELLMDLPVVEKPVPAILMNCDNQTVIIKVNSSKDNMKSSRHIKRRLKS 1367



 Score = 38.9 bits (89), Expect(2) = 5e-27
 Identities = 19/43 (44%), Positives = 29/43 (67%)
 Frame = -2

Query: 153  RNKNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKP 25
            + KN  VI+L + ++ +NLADQ T+GL +  +  +SR MGL P
Sbjct: 1370 KQKNSGVIALDYVQTARNLADQFTKGLPRNVIDSASREMGLIP 1412


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  103 bits (258), Expect(2) = 5e-27
 Identities = 53/121 (43%), Positives = 74/121 (61%)
 Frame = -1

Query: 523  DLSLCYCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEF 344
            D ++ Y GF  +LE  SDANW++DS + KST G++F LG   + W   +QTII  +T+E 
Sbjct: 1111 DYAIEYSGFPAVLEGYSDANWISDSDETKSTSGYVFTLGGGAVTWRSARQTIIARSTMES 1170

Query: 343  ELITLNCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILM 164
            E + L  A  E EWL+N L+ IP+ + P PS+ M CD +S I +    S N K N HI +
Sbjct: 1171 EFVALEMAGSEAEWLKNFLANIPLGMKPTPSVSMHCDCQSAIAIAKNKSYNGK-NRHIQL 1229

Query: 163  R 161
            R
Sbjct: 1230 R 1230



 Score = 42.7 bits (99), Expect(2) = 5e-27
 Identities = 20/37 (54%), Positives = 30/37 (81%)
 Frame = -2

Query: 132  ISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKPI 22
            IS+ + +SE++LAD LT+ L +  +LE+SRGMGLKP+
Sbjct: 1243 ISIDYVKSERDLADPLTKPLGRKMILETSRGMGLKPL 1279


>gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1197

 Score =  110 bits (275), Expect(2) = 5e-27
 Identities = 51/124 (41%), Positives = 81/124 (65%)
 Frame = -1

Query: 523  DLSLCYCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEF 344
            +L L Y G+  +LE  SD+NW++D  ++K+T G++F LG   ++W   KQTI+  +T+E 
Sbjct: 1028 ELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEV 1087

Query: 343  ELITLNCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILM 164
            EL  L+ A +E EWLR+LL  +P+V  P+P+I M CD+++VI  +N S  N K + H+  
Sbjct: 1088 ELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKR 1147

Query: 163  RFST 152
            R  +
Sbjct: 1148 RLKS 1151



 Score = 36.2 bits (82), Expect(2) = 5e-27
 Identities = 16/42 (38%), Positives = 29/42 (69%)
 Frame = -2

Query: 147  KNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKPI 22
            +N  VI+L + ++ +NLAD  T+GL +  +  +S+ MGL+P+
Sbjct: 1156 RNSGVITLDYIQTARNLADPFTKGLSRNVINNASKEMGLRPM 1197


>gb|AAS01934.1| putative Integrase core domain containing protein [Oryza sativa
            Japonica Group]
          Length = 1180

 Score =  110 bits (275), Expect(2) = 5e-27
 Identities = 51/124 (41%), Positives = 81/124 (65%)
 Frame = -1

Query: 523  DLSLCYCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEF 344
            +L L Y G+  +LE  SD+NW++D  ++K+T G++F LG   ++W   KQTI+  +T+E 
Sbjct: 1011 ELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEV 1070

Query: 343  ELITLNCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILM 164
            EL  L+ A +E EWLR+LL  +P+V  P+P+I M CD+++VI  +N S  N K + H+  
Sbjct: 1071 ELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKR 1130

Query: 163  RFST 152
            R  +
Sbjct: 1131 RLKS 1134



 Score = 36.2 bits (82), Expect(2) = 5e-27
 Identities = 16/42 (38%), Positives = 29/42 (69%)
 Frame = -2

Query: 147  KNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKPI 22
            +N  VI+L + ++ +NLAD  T+GL +  +  +S+ MGL+P+
Sbjct: 1139 RNSGVITLDYIQTARNLADPFTKGLSRNVINNASKEMGLRPM 1180


>gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1453

 Score =  107 bits (267), Expect(2) = 7e-27
 Identities = 50/119 (42%), Positives = 78/119 (65%)
 Frame = -1

Query: 508  YCGFLILLE*ISDANWVTDSLDVKSTFGFMFLLGDVVIAWNFFKQTIIYCTTIEFELITL 329
            Y G+  +LE  SD+NW++D+ ++K+T G++F LG   ++W   KQTI+  +T+E EL  L
Sbjct: 1289 YTGYPKVLEGYSDSNWISDADEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTAL 1348

Query: 328  NCACIETEWLRNLLSQIPIVLMPMPSIFMRCDSKSVIELINQSS*NKKMNSHILMRFST 152
            + A +E EWLR LL  +P+V  P+P+I M CD+++VI  +N S  N K + HI  R  +
Sbjct: 1349 DTATVEAEWLRELLMDLPVVEKPVPAILMNCDNQTVIIKVNSSKDNMKSSRHIKRRLKS 1407



 Score = 38.9 bits (89), Expect(2) = 7e-27
 Identities = 19/43 (44%), Positives = 29/43 (67%)
 Frame = -2

Query: 153  RNKNGNVISLFFDRSEKNLADQLTRGL*KTNVLESSRGMGLKP 25
            + KN  VI+L + ++ +NLADQ T+GL +  +  +SR MGL P
Sbjct: 1410 KQKNSGVIALDYVQTARNLADQFTKGLPRNVIDSASREMGLIP 1452