BLASTX nr result

ID: Stemona21_contig00028356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00028356
         (359 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   154   1e-35
emb|CAN83486.1| hypothetical protein VITISV_019986 [Vitis vinifera]   150   1e-34
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]                       150   2e-34
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...   147   1e-33
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...   147   1e-33
emb|CAE02261.2| OSJNBb0058J09.8 [Oryza sativa Japonica Group]         147   1e-33
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   147   1e-33
emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]         147   2e-33
emb|CAE05795.1| OSJNBb0046K02.5 [Oryza sativa Japonica Group]         147   2e-33
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ...   146   2e-33
gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group...   146   2e-33
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   146   2e-33
gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subc...   146   3e-33
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc...   146   3e-33
gb|AAW56912.1| hypothetical protein [Oryza sativa Japonica Group]     145   4e-33
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc...   145   4e-33
gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subc...   145   4e-33
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   145   4e-33
gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subc...   145   4e-33
gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subc...   145   4e-33

>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  154 bits (389), Expect = 1e-35
 Identities = 73/119 (61%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G K VI+CLYVDDILI   D+  I + K FLS NFDMKDLGEADVIL +KL
Sbjct: 976  DKCVYYRFSGGKGVIMCLYVDDILIFGTDLEAIMETKLFLSKNFDMKDLGEADVILNIKL 1035

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             +   GI+LSQSHYVEK++ +FG++DC PV+TPYDPS  L K  G+P+ Q  Y+QIIGS
Sbjct: 1036 IKGEDGITLSQSHYVEKVMTRFGHMDCKPVTTPYDPSYTLSKYEGEPVNQLLYSQIIGS 1094


>emb|CAN83486.1| hypothetical protein VITISV_019986 [Vitis vinifera]
          Length = 332

 Score =  150 bits (380), Expect = 1e-34
 Identities = 69/119 (57%), Positives = 88/119 (73%)
 Frame = -1

Query: 359 DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
           DKC+Y K   N CV++CLYVDD+LI    + ++ + K FL   FDMKDLGEA+VILG+K+
Sbjct: 172 DKCIYNKYEDNTCVVICLYVDDMLIFGTSLEVVCETKKFLGSKFDMKDLGEAEVILGIKI 231

Query: 179 SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
            RT +G+ LSQ HY+EKIL+KF + DC P+STPYDPS  LKKN    +AQ +YA IIGS
Sbjct: 232 IRTPNGLKLSQEHYIEKILRKFEHFDCKPLSTPYDPSSQLKKNRKHSVAQIEYAHIIGS 290


>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
          Length = 1264

 Score =  150 bits (379), Expect = 2e-34
 Identities = 71/119 (59%), Positives = 93/119 (78%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            D+C+Y +  G + VILCLYVDDILI   +I +IN++K+FLS +FDMKDLGEADVIL +KL
Sbjct: 931  DRCVYYRCGGGEGVILCLYVDDILIFGTNIDVINEVKSFLSKSFDMKDLGEADVILNIKL 990

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             +   GI+LSQSHYVEK+LK+FG+ +C P  TPYDPSV L+KN    + Q +Y+QI+GS
Sbjct: 991  IKADGGITLSQSHYVEKVLKRFGFSECKPSPTPYDPSVTLRKNKRIGLDQLRYSQIVGS 1049


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  147 bits (371), Expect = 1e-33
 Identities = 73/119 (61%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G + VILCLYVDDILI   +I +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 969  DKCVYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKL 1028

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 1029 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGS 1087


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  147 bits (371), Expect = 1e-33
 Identities = 73/119 (61%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G + VILCLYVDDILI   +I +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 969  DKCVYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKL 1028

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 1029 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGS 1087


>emb|CAE02261.2| OSJNBb0058J09.8 [Oryza sativa Japonica Group]
          Length = 1282

 Score =  147 bits (371), Expect = 1e-33
 Identities = 73/119 (61%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G + VILCLYVDDILI   ++ +IND+K+FLS NFDMKDLG ADVIL +KL
Sbjct: 850  DKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINDVKSFLSQNFDMKDLGVADVILNIKL 909

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 910  IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 968


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  147 bits (371), Expect = 1e-33
 Identities = 73/119 (61%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G + VILCLYVDDILI   +I +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 969  DKCVYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKL 1028

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 1029 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGS 1087


>emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
          Length = 1342

 Score =  147 bits (370), Expect = 2e-33
 Identities = 73/119 (61%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G K VILCLYVDDILI   ++ +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 969  DKCVYYRHGGGKGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKL 1028

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 1029 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNNRIARNQLEYSQIIGS 1087


>emb|CAE05795.1| OSJNBb0046K02.5 [Oryza sativa Japonica Group]
          Length = 1356

 Score =  147 bits (370), Expect = 2e-33
 Identities = 73/119 (61%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G K VILCLYVDDILI   ++ +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 969  DKCVYYRHGGGKGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKL 1028

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 1029 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNNRIARNQLEYSQIIGS 1087


>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1460

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/119 (60%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G + VILCLYVDDILI   ++ +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 969  DKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKL 1028

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 1029 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGS 1087


>gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53749238|gb|AAU90098.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1320

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/119 (60%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G + VILCLYVDDILI   ++ +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 969  DKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKL 1028

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 1029 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGS 1087


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/119 (60%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G + VILCLYVDDILI   ++ +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 969  DKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKL 1028

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 1029 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGS 1087


>gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1468

 Score =  146 bits (368), Expect = 3e-33
 Identities = 72/119 (60%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G + VILCLYVDDILI   ++ +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 1056 DKCVYYRYGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKL 1115

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 1116 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1174


>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  146 bits (368), Expect = 3e-33
 Identities = 72/119 (60%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G + VILCLYVDDILI   ++ +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 969  DKCVYYRYGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKL 1028

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 1029 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1087


>gb|AAW56912.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 913

 Score =  145 bits (367), Expect = 4e-33
 Identities = 72/119 (60%), Positives = 90/119 (75%)
 Frame = -1

Query: 359 DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
           DKC+Y +  G + VILCLYVDDILI   ++ +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 236 DKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKL 295

Query: 179 SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
            R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 296 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNRRIARNQLEYSQIIGS 354


>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  145 bits (367), Expect = 4e-33
 Identities = 72/119 (60%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G + VILCLYVDDILI   ++ +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 969  DKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKL 1028

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 1029 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1087


>gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1361

 Score =  145 bits (367), Expect = 4e-33
 Identities = 72/119 (60%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G + VILCLYVDDILI   ++ +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 1054 DKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKL 1113

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 1114 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1172


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  145 bits (367), Expect = 4e-33
 Identities = 72/119 (60%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G + VILCLYVDDILI   ++ +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 762  DKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKL 821

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 822  IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 880


>gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1805

 Score =  145 bits (367), Expect = 4e-33
 Identities = 72/119 (60%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G + VILCLYVDDILI   ++ +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 1454 DKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKL 1513

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 1514 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1572


>gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2027

 Score =  145 bits (367), Expect = 4e-33
 Identities = 72/119 (60%), Positives = 90/119 (75%)
 Frame = -1

Query: 359  DKCLYCKMVGNKCVILCLYVDDILILAPDISLINDIKTFLSHNFDMKDLGEADVILGVKL 180
            DKC+Y +  G + VILCLYVDDILI   ++ +IN++K+FLS NFDMKDLG ADVIL +KL
Sbjct: 1164 DKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKL 1223

Query: 179  SRTHSGISLSQSHYVEKILKKFGYLDCSPVSTPYDPSVHLKKNLGDPIAQEQYAQIIGS 3
             R  +GI+L QSHYVEKIL +FGY+D  P  TPYDPS+ L+KN      Q +Y+QIIGS
Sbjct: 1224 IRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGS 1282


Top