BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00027945
         (342 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                  66   4e-09
gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma ca...    60   3e-07
gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma ca...    60   3e-07
gb|EXC36325.1| DNA topoisomerase 1 [Morus notabilis]                   58   1e-06
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]                58   1e-06

>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 44/109 (40%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
 Frame = -1

Query: 336 PVLHDNSDDDDAPIIFRRTSSVSKPNQLTSATKKPSSRKNDESVKRLASVQGAANGPSSS 157
           P L D+ D+DD PI+F+R +S SK +Q  S T+K SS+K D    R       ANG SSS
Sbjct: 9   PNLRDDMDEDDEPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDSRPANGESSS 68

Query: 156 SQKNNMLSTANMPTKKSMAISS-NSLASKPEQSRVSLERRYAVTDIAKR 13
            QK  M+     P+K S   S  +S  SKP Q +  L      T  AK+
Sbjct: 69  GQKGRMVP----PSKPSQVKSPLSSPPSKPSQVKSPLSSPKVSTSSAKK 113


>gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
           gi|508720296|gb|EOY12193.1| DNA topoisomerase I alpha
           isoform 3 [Theobroma cacao]
          Length = 836

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = -1

Query: 321 NSDDDDAPIIFRRTS-SVSKPNQLTSATKKPSSRKNDESVKRLASVQGAANGPSSSSQKN 145
           + DDDD P++F+R + S SK NQL S  KK SS+++D    R  S   + NG SS++ KN
Sbjct: 14  DDDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDVRSPNGQSSNAPKN 73

Query: 144 NMLSTANMPTKKSMAISSNSLAS 76
             +S++  P  KS  +S  +  S
Sbjct: 74  KSISSSKSPPVKSPILSPKASTS 96


>gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
           gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha
           isoform 1 [Theobroma cacao]
          Length = 904

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = -1

Query: 321 NSDDDDAPIIFRRTS-SVSKPNQLTSATKKPSSRKNDESVKRLASVQGAANGPSSSSQKN 145
           + DDDD P++F+R + S SK NQL S  KK SS+++D    R  S   + NG SS++ KN
Sbjct: 14  DDDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDVRSPNGQSSNAPKN 73

Query: 144 NMLSTANMPTKKSMAISSNSLAS 76
             +S++  P  KS  +S  +  S
Sbjct: 74  KSISSSKSPPVKSPILSPKASTS 96


>gb|EXC36325.1| DNA topoisomerase 1 [Morus notabilis]
          Length = 908

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
 Frame = -1

Query: 330 LHDNSDDDDAPIIFRRTSSVSKPNQLTSATKKPSSRKNDESVKRLASVQGAANGPSSSSQ 151
           L D+ D+DD P+I +R ++ SKPNQL+S  KKP S++ D    R  S     NG +S SQ
Sbjct: 11  LFDDFDEDDGPLIVKRKNTASKPNQLSSELKKPLSQRLDGQSGRQISDGVFLNGINSYSQ 70

Query: 150 KNNMLSTANMPTKKSMAIS--SNSLASKPEQSRVSLERRYAVTDIAKR 13
           K  ++ ++     KS  +S  +++ ++K    +  +E R A T +  R
Sbjct: 71  KGKVVQSSKASPVKSPLVSPKASTSSTKAATQKSLVEIRRASTPLDGR 118


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
 Frame = -1

Query: 342 VNPVLHDNSDDDDAPIIFRRTSSVSKPNQLTSATKKPSSRKNDESVKRLASVQGAANGPS 163
           V   + D  D+DD P++F+R+++ SK NQL S TKK S R + +S ++++ V  + NG S
Sbjct: 7   VKEKMMDEIDEDDEPLVFKRSNATSKHNQLNSDTKKSSQRYDGQSGRQVSDVP-STNGQS 65

Query: 162 SSSQ--KNNMLSTANMPTKKSMAISSNSLASKPEQSRVS 52
           SS+   K   LS+   P     A +S + AS     +VS
Sbjct: 66  SSASKGKTTKLSSMKSPIASPKASTSFAKASPVANPKVS 104