BLASTX nr result
ID: Stemona21_contig00027270
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00027270
(295 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a... 186 3e-45
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 184 8e-45
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 184 8e-45
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 184 8e-45
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 184 8e-45
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 183 2e-44
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 182 3e-44
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 182 3e-44
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 182 4e-44
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 172 6e-41
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 146 3e-33
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 132 6e-29
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus] 124 2e-26
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5... 124 2e-26
ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P2... 110 2e-22
gb|ACS28233.1| replicase [Alternanthera mosaic virus] 107 1e-21
ref|NP_077079.1| replicase [Clover yellow mosaic virus] 107 1e-21
ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082... 107 2e-21
gb|ACS28228.1| replicase [Alternanthera mosaic virus] 107 2e-21
gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosai... 107 2e-21
>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 186 bits (472), Expect = 3e-45
Identities = 92/96 (95%), Positives = 93/96 (96%)
Frame = +3
Query: 3 HASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLG 182
HASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYINATHRNSKFLANKLG
Sbjct: 73 HASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINATHRNSKFLANKLG 132
Query: 183 VYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
VYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAA TD
Sbjct: 133 VYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTD 168
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 184 bits (468), Expect = 8e-45
Identities = 90/96 (93%), Positives = 93/96 (96%)
Frame = +3
Query: 3 HASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLG 182
HASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLG
Sbjct: 742 HASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLG 801
Query: 183 VYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
VYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAA TD
Sbjct: 802 VYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTD 837
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 184 bits (468), Expect = 8e-45
Identities = 90/96 (93%), Positives = 93/96 (96%)
Frame = +3
Query: 3 HASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLG 182
HASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLG
Sbjct: 742 HASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLG 801
Query: 183 VYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
VYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAA TD
Sbjct: 802 VYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTD 837
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 184 bits (468), Expect = 8e-45
Identities = 90/96 (93%), Positives = 93/96 (96%)
Frame = +3
Query: 3 HASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLG 182
HASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLG
Sbjct: 742 HASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLG 801
Query: 183 VYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
VYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAA TD
Sbjct: 802 VYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTD 837
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 184 bits (468), Expect = 8e-45
Identities = 90/96 (93%), Positives = 93/96 (96%)
Frame = +3
Query: 3 HASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLG 182
HASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLG
Sbjct: 742 HASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLG 801
Query: 183 VYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
VYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAA TD
Sbjct: 802 VYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTD 837
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 183 bits (464), Expect = 2e-44
Identities = 89/96 (92%), Positives = 93/96 (96%)
Frame = +3
Query: 3 HASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLG 182
HASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLG
Sbjct: 742 HASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLG 801
Query: 183 VYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
VYSSNSCPLKVTYGFQP+PG+HLLVPSL+KKAA TD
Sbjct: 802 VYSSNSCPLKVTYGFQPRPGLHLLVPSLVKKAAFTD 837
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 182 bits (463), Expect = 3e-44
Identities = 87/96 (90%), Positives = 93/96 (96%)
Frame = +3
Query: 3 HASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLG 182
HA+LEL+ILTGDPRQSTHHEANEEALISKL+PATT FSELSRYYINATHRNSKFLANKLG
Sbjct: 730 HANLELIILTGDPRQSTHHEANEEALISKLSPATTTFSELSRYYINATHRNSKFLANKLG 789
Query: 183 VYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
+YSSN CPLKVTYGFQPQPG+HLLVPSL+KKAA TD
Sbjct: 790 IYSSNHCPLKVTYGFQPQPGLHLLVPSLVKKAAFTD 825
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 182 bits (463), Expect = 3e-44
Identities = 89/96 (92%), Positives = 92/96 (95%)
Frame = +3
Query: 3 HASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLG 182
HASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSKFLANKLG
Sbjct: 742 HASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKFLANKLG 801
Query: 183 VYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
VYSSN CPLKVTYGFQPQPG+HLLVPSL+KKAA TD
Sbjct: 802 VYSSNPCPLKVTYGFQPQPGLHLLVPSLVKKAAFTD 837
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 182 bits (462), Expect = 4e-44
Identities = 89/96 (92%), Positives = 92/96 (95%)
Frame = +3
Query: 3 HASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLG 182
HASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNSK LANKLG
Sbjct: 742 HASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNSKLLANKLG 801
Query: 183 VYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
VYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAA TD
Sbjct: 802 VYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTD 837
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 172 bits (435), Expect = 6e-41
Identities = 84/96 (87%), Positives = 89/96 (92%)
Frame = +3
Query: 3 HASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLG 182
HA+LELVILTGDPRQSTHHE+NEEALISKL PATTI+S SRYYINAT RNSKFLANKLG
Sbjct: 747 HANLELVILTGDPRQSTHHESNEEALISKLPPATTIYSAFSRYYINATLRNSKFLANKLG 806
Query: 183 VYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
VYS+NSCPL VTYGFQP PG+HLLVPSLMKKAA TD
Sbjct: 807 VYSANSCPLNVTYGFQPLPGLHLLVPSLMKKAAFTD 842
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 146 bits (368), Expect = 3e-33
Identities = 70/93 (75%), Positives = 81/93 (87%)
Frame = +3
Query: 12 LELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYS 191
L+L ILTGDPRQSTHHE+NE+A+I++L PAT IFS L RYYINATHRN K LANKLGVYS
Sbjct: 726 LKLAILTGDPRQSTHHESNEQAMIAQLEPATKIFSALCRYYINATHRNVKELANKLGVYS 785
Query: 192 SNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
SN PL V+YGF+P+PG+HLLVPSL+KKAA D
Sbjct: 786 SNPSPLHVSYGFRPEPGLHLLVPSLVKKAAFAD 818
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1
Length = 1449
Score = 132 bits (331), Expect = 6e-29
Identities = 61/96 (63%), Positives = 80/96 (83%)
Frame = +3
Query: 3 HASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLG 182
H ++EL++LTGD +QS HHE NE+A+I++L P+T IFS+ SRYYINATHRN+K LAN LG
Sbjct: 817 HPNVELIVLTGDNKQSVHHETNEQAMIAQLEPSTQIFSQFSRYYINATHRNAKKLANMLG 876
Query: 183 VYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
VYS N+ LK+T+GFQP +HLLVPSL+KKAA ++
Sbjct: 877 VYSDNNKELKITHGFQPIKDIHLLVPSLIKKAAFSE 912
>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 124 bits (310), Expect = 2e-26
Identities = 61/90 (67%), Positives = 71/90 (78%)
Frame = +3
Query: 12 LELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYS 191
+ELVILTGD RQSTHHE NE+A+IS+LAPAT +F L RYYINATHRN + LANKL VYS
Sbjct: 752 VELVILTGDARQSTHHENNEQAMISQLAPATEVFQPLCRYYINATHRNKRDLANKLEVYS 811
Query: 192 SNSCPLKVTYGFQPQPGMHLLVPSLMKKAA 281
K+T GFQP +HLLVPSL+KK+A
Sbjct: 812 EKEGETKITMGFQPIKDLHLLVPSLLKKSA 841
>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 124 bits (310), Expect = 2e-26
Identities = 61/90 (67%), Positives = 71/90 (78%)
Frame = +3
Query: 12 LELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYS 191
+ELVILTGD RQSTHHE NE+A+IS+LAPAT +F L RYYINATHRN + LANKL VYS
Sbjct: 752 VELVILTGDARQSTHHENNEQAMISQLAPATEVFQPLCRYYINATHRNKRDLANKLEVYS 811
Query: 192 SNSCPLKVTYGFQPQPGMHLLVPSLMKKAA 281
K+T GFQP +HLLVPSL+KK+A
Sbjct: 812 EKEGETKITMGFQPIKDLHLLVPSLLKKSA 841
>ref|NP_044330.1| replicase [Papaya mosaic virus] gi|139137|sp|P20951.1|RDRP_PMV
RecName: Full=RNA replication protein; AltName: Full=176
kDa protein; AltName: Full=ORF1 protein; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=Helicase gi|222331|dbj|BAA03050.1| unnamed
protein product [Papaya mosaic virus]
gi|409915202|gb|AFV46461.1| replicase [Papaya mosaic
virus]
Length = 1547
Score = 110 bits (275), Expect = 2e-22
Identities = 54/95 (56%), Positives = 69/95 (72%)
Frame = +3
Query: 6 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 185
++++L+ILTGD +QS HHE+NE A S + P SEL RYYINATHRN K LANKLGV
Sbjct: 905 STVQLIILTGDCKQSVHHESNENATTSSIEPLVKEASELCRYYINATHRNKKDLANKLGV 964
Query: 186 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
YS + +VT+G P PG+H+LVPSL KK A ++
Sbjct: 965 YSEKTGLTEVTHGTTPIPGLHMLVPSLYKKQAFSE 999
>gb|ACS28233.1| replicase [Alternanthera mosaic virus]
Length = 1541
Score = 107 bits (268), Expect = 1e-21
Identities = 53/95 (55%), Positives = 68/95 (71%)
Frame = +3
Query: 6 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 185
+S+EL++LTGD +QS HHE+NE A+ S + P T + SRYYINATHRN + LANKLGV
Sbjct: 899 SSVELLVLTGDSKQSVHHESNENAMSSLIEPFTLEADKYSRYYINATHRNKRDLANKLGV 958
Query: 186 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
YS + +T G P PG+HLLVPSL KK A ++
Sbjct: 959 YSEVTGITSITQGNHPVPGLHLLVPSLYKKEAFSE 993
>ref|NP_077079.1| replicase [Clover yellow mosaic virus]
Length = 1670
Score = 107 bits (268), Expect = 1e-21
Identities = 52/96 (54%), Positives = 70/96 (72%)
Frame = +3
Query: 3 HASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLG 182
H ++E ILTGDPRQST HE+NE+A+I+ L+ +T FS+ SRYYINATHRN + LA LG
Sbjct: 1038 HKNVEWAILTGDPRQSTFHESNEQAMINHLSKSTEHFSQFSRYYINATHRNKQDLARFLG 1097
Query: 183 VYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
VYS + ++ +P+P HLLVPSL+KK + T+
Sbjct: 1098 VYSEKTGLTSISMSSRPEPDWHLLVPSLIKKRSYTE 1133
>ref|YP_459944.1| replicase [Alternanthera mosaic virus] gi|62082367|gb|AAX62019.1|
replicase [Alternanthera mosaic virus]
Length = 1541
Score = 107 bits (266), Expect = 2e-21
Identities = 53/95 (55%), Positives = 67/95 (70%)
Frame = +3
Query: 6 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 185
+S EL++LTGD +QS HHE+NE A+ S + P T + SRYYINATHRN + LANKLGV
Sbjct: 899 SSAELLVLTGDSKQSVHHESNENAMSSLIEPFTLEADKYSRYYINATHRNKRDLANKLGV 958
Query: 186 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
YS + +T G P PG+HLLVPSL KK A ++
Sbjct: 959 YSEVTGITSITQGNHPVPGLHLLVPSLYKKQAFSE 993
>gb|ACS28228.1| replicase [Alternanthera mosaic virus]
Length = 1541
Score = 107 bits (266), Expect = 2e-21
Identities = 53/95 (55%), Positives = 67/95 (70%)
Frame = +3
Query: 6 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 185
+S EL++LTGD +QS HHE+NE A+ S + P T + SRYYINATHRN + LANKLGV
Sbjct: 899 SSAELLVLTGDSKQSVHHESNENAMSSLIEPFTLEADKYSRYYINATHRNKRDLANKLGV 958
Query: 186 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
YS + +T G P PG+HLLVPSL KK A ++
Sbjct: 959 YSEVTGITSITQGNHPVPGLHLLVPSLYKKEAFSE 993
>gb|ACO35593.1| RNA-dependent RNA polymerase [Alternanthera mosaic virus]
Length = 1541
Score = 107 bits (266), Expect = 2e-21
Identities = 53/95 (55%), Positives = 67/95 (70%)
Frame = +3
Query: 6 ASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGV 185
+S EL++LTGD +QS HHE+NE A+ S + P T + SRYYINATHRN + LANKLGV
Sbjct: 899 SSAELLVLTGDSKQSVHHESNENAMSSLIEPFTLEADKYSRYYINATHRNKRDLANKLGV 958
Query: 186 YSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAVTD 290
YS + +T G P PG+HLLVPSL KK A ++
Sbjct: 959 YSEVTGITSITQGNHPVPGLHLLVPSLYKKQAFSE 993