BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00026910
         (653 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626...   186   8e-65
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607...   184   2e-64
ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614...   182   4e-64
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             179   6e-63
ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608...   181   1e-62
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   179   1e-59
ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617...   171   6e-59
ref|XP_004292410.1| PREDICTED: uncharacterized protein LOC101297...   177   8e-59
ref|XP_004308263.1| PREDICTED: uncharacterized protein LOC101303...   179   2e-57
dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]                   160   1e-55
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             180   2e-55
ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623...   186   4e-55
gb|ABD63162.1| RNase H family protein [Asparagus officinalis]         154   5e-55
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...   167   2e-53
gb|AAT85251.1| putative polyprotein [Oryza sativa Japonica Group]     167   2e-53
gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...   167   3e-53
gb|ABF98885.1| retrotransposon protein, putative, unclassified [...   167   5e-53
gb|AAL58969.1|AC091811_18 putative gag-pol precursor [Oryza sati...   167   5e-53
gb|AAX96829.1| retrotransposon protein, putative, unclassified [...   167   6e-53
gb|AAX95884.1| retrotransposon protein, putative, unclassified [...   167   8e-53

>ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626228 [Citrus sinensis]
          Length = 1189

 Score =  186 bits (473), Expect(2) = 8e-65
 Identities = 86/108 (79%), Positives = 98/108 (90%)
 Frame = -1

Query: 332  VLYPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMD 153
            V YP W++N+VLVKKA+GKWRMCVDFTDLNKACPKD FPLP+IDQLVDST+G+ LL+FMD
Sbjct: 826  VSYPEWISNVVLVKKANGKWRMCVDFTDLNKACPKDSFPLPKIDQLVDSTAGHGLLSFMD 885

Query: 152  AFSGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVN 9
            AFSGYNQI M+  +EE TAFIT +GL+CY VMPFGLKNAGATYQRLVN
Sbjct: 886  AFSGYNQIPMYEPDEESTAFITNQGLFCYRVMPFGLKNAGATYQRLVN 933



 Score = 87.4 bits (215), Expect(2) = 8e-65
 Identities = 42/99 (42%), Positives = 62/99 (62%)
 Frame = -3

Query: 648  RAQPAEELEKVYLHPSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPA 469
            R +P E+LE V L P +P K + IG  L    K+ L+KCL  + D+FAW+++DMPGIDP 
Sbjct: 721  RQEPVEDLETVSLGPENPGKTIRIGSRLEGEQKQELVKCLQAHADVFAWTHEDMPGIDPE 780

Query: 468  IITHHLNVDPNKKPVQQKKRKAAPERQKFINEQVEQYLK 352
            +  H L +    + V+QK+R    ER + IN +VE+ L+
Sbjct: 781  VACHRLAIKKGARAVRQKRRCFNQERYEAINGEVEKLLR 819


>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
          Length = 1866

 Score =  184 bits (467), Expect(2) = 2e-64
 Identities = 84/106 (79%), Positives = 95/106 (89%)
 Frame = -1

Query: 326  YPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAF 147
            YP W++N+VLVKKA+GKWRMCVDFTDLNKACPKD FPLP+IDQLVDST+G+ LL+FMDAF
Sbjct: 893  YPEWISNVVLVKKANGKWRMCVDFTDLNKACPKDSFPLPKIDQLVDSTAGHSLLSFMDAF 952

Query: 146  SGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVN 9
            SGYNQI M+  +EE T FIT  GL+CY VMPFGLKNAGATYQRLVN
Sbjct: 953  SGYNQIPMNEQDEESTTFITNMGLFCYRVMPFGLKNAGATYQRLVN 998



 Score = 88.6 bits (218), Expect(2) = 2e-64
 Identities = 43/99 (43%), Positives = 63/99 (63%)
 Frame = -3

Query: 648  RAQPAEELEKVYLHPSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPA 469
            R +P E+L++V +  S P K + +G  L + +K  L+KCL  + D+FAWS++DMPGID  
Sbjct: 786  RQEPVEKLKEVVVSRSDPSKVVKVGSELGEAIKGELVKCLQSHADIFAWSHEDMPGIDRG 845

Query: 468  IITHHLNVDPNKKPVQQKKRKAAPERQKFINEQVEQYLK 352
            I  H L V    +PV+QK+R    ER + IN +VE+ LK
Sbjct: 846  IACHKLAVKRGARPVRQKRRCFNHERYEAINAEVEKLLK 884


>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
          Length = 1089

 Score =  182 bits (462), Expect(2) = 4e-64
 Identities = 83/106 (78%), Positives = 95/106 (89%)
 Frame = -1

Query: 326  YPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAF 147
            YP W++N+VLVKKA+GKWRMCVDFTDLNKACPKD FPLP+IDQLVDST+G+ LL+FMDAF
Sbjct: 726  YPEWISNVVLVKKANGKWRMCVDFTDLNKACPKDSFPLPKIDQLVDSTAGHGLLSFMDAF 785

Query: 146  SGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVN 9
            SGYNQI M+  +EE T FIT  GL+CY +MPFGLKNAGATYQRLVN
Sbjct: 786  SGYNQIPMNEQDEENTTFITNMGLFCYRMMPFGLKNAGATYQRLVN 831



 Score = 89.4 bits (220), Expect(2) = 4e-64
 Identities = 43/99 (43%), Positives = 63/99 (63%)
 Frame = -3

Query: 648 RAQPAEELEKVYLHPSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPA 469
           R +P E+LE+V +  S P + + +G  L + +K  L+KCL  + D+FAWS++DMPGID  
Sbjct: 619 RQEPVEKLEEVVISRSDPSRVVKVGSELGEAIKAELVKCLQSHADVFAWSHEDMPGIDRG 678

Query: 468 IITHHLNVDPNKKPVQQKKRKAAPERQKFINEQVEQYLK 352
           I  H L V    +PV+QK+R    ER + IN +VE+ LK
Sbjct: 679 IACHKLAVKRGARPVRQKRRCFNHERYEAINAEVEKLLK 717


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  179 bits (455), Expect(2) = 6e-63
 Identities = 81/110 (73%), Positives = 96/110 (87%)
 Frame = -1

Query: 332  VLYPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMD 153
            V YP W+AN V+VKK +GKWR+CVD+TDLNKACPKD +PLP ID+LV++TSGN LL+FMD
Sbjct: 856  VKYPEWLANPVVVKKKNGKWRVCVDYTDLNKACPKDSYPLPHIDRLVEATSGNGLLSFMD 915

Query: 152  AFSGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVNLM 3
            AFSGYNQI MH D++EKT+F+T+RG YCY VM FGLKNAGATYQR VN M
Sbjct: 916  AFSGYNQILMHKDDQEKTSFVTDRGTYCYKVMSFGLKNAGATYQRFVNKM 965



 Score = 88.2 bits (217), Expect(2) = 6e-63
 Identities = 43/91 (47%), Positives = 58/91 (63%)
 Frame = -3

Query: 624  EKVYLHPSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPAIITHHLNV 445
            E V +  S P + + +G  +S  ++  L+  L  N   FAWS +DM GIDPAI  H LNV
Sbjct: 759  EMVNIDESDPTRCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNV 818

Query: 444  DPNKKPVQQKKRKAAPERQKFINEQVEQYLK 352
            DP  KPV+QK+RK  PER + +NE+VE+ LK
Sbjct: 819  DPTFKPVKQKRRKLGPERARAVNEEVEKLLK 849


>ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608416 [Citrus sinensis]
          Length = 1313

 Score =  181 bits (459), Expect(2) = 1e-62
 Identities = 83/106 (78%), Positives = 94/106 (88%)
 Frame = -1

Query: 326  YPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAF 147
            YP W++N+VLVKKA+GKWRMCVDFTDLNKACPKD FPL +IDQLVDST+G+ LL+FMDAF
Sbjct: 738  YPEWISNVVLVKKANGKWRMCVDFTDLNKACPKDSFPLQKIDQLVDSTAGHSLLSFMDAF 797

Query: 146  SGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVN 9
            SGYNQI M+  +EE T FIT  GL+CY VMPFGLKNAGATYQRLVN
Sbjct: 798  SGYNQIPMNEQDEESTTFITNMGLFCYRVMPFGLKNAGATYQRLVN 843



 Score = 85.5 bits (210), Expect(2) = 1e-62
 Identities = 42/99 (42%), Positives = 62/99 (62%)
 Frame = -3

Query: 648 RAQPAEELEKVYLHPSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPA 469
           R +P E+LE+V +  S P + + +G  L   +K  L+KCL  + D+FAWS++DMPGID  
Sbjct: 631 RQEPVEKLEEVVVSRSDPSRVVKVGSELGREIKTELVKCLQSHADIFAWSHEDMPGIDRR 690

Query: 468 IITHHLNVDPNKKPVQQKKRKAAPERQKFINEQVEQYLK 352
           I  H L V    +PV+QK+R    +R + IN +VE+ LK
Sbjct: 691 IACHKLAVKKGARPVRQKRRCFNHKRYETINAEVEKLLK 729


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  179 bits (454), Expect(2) = 1e-59
 Identities = 81/110 (73%), Positives = 95/110 (86%)
 Frame = -1

Query: 332  VLYPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMD 153
            V YP W+ N V+VKK +GKWR+C+DFTDLNKACPKD FPLP ID+LV++T+GNELL+FMD
Sbjct: 814  VRYPDWLRNPVVVKKKNGKWRVCIDFTDLNKACPKDSFPLPHIDRLVEATAGNELLSFMD 873

Query: 152  AFSGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVNLM 3
            AFSGYNQI MH ++ EKT FIT++G YCY VMPFGLKNAGATY RLVN M
Sbjct: 874  AFSGYNQILMHQNDREKTVFITDQGTYCYKVMPFGLKNAGATYPRLVNQM 923



 Score = 77.4 bits (189), Expect(2) = 1e-59
 Identities = 38/89 (42%), Positives = 55/89 (61%)
 Frame = -3

Query: 621 KVYLHPSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPAIITHHLNVD 442
           +V +  S P + + I   L   ++  L+  L  N   FAWS +DMPGID A+  H LNVD
Sbjct: 718 QVNIDESDPSRCVGIRIDLPSELQNELVNFLRQNAATFAWSVEDMPGIDSAVTCHELNVD 777

Query: 441 PNKKPVQQKKRKAAPERQKFINEQVEQYL 355
           P  KP++QK+RK  P+R K +NE+V++ L
Sbjct: 778 PTYKPLKQKRRKLGPDRTKDVNEEVKKLL 806


>ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617447 [Citrus sinensis]
          Length = 1100

 Score =  171 bits (433), Expect(2) = 6e-59
 Identities = 78/103 (75%), Positives = 89/103 (86%)
 Frame = -1

Query: 326 YPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAF 147
           YP W++N+VLVKKA+GKWRMCVDFTDLNKAC KD FPLP IDQLVDST+G+ LL+F+DAF
Sbjct: 592 YPEWISNVVLVKKANGKWRMCVDFTDLNKACQKDSFPLPMIDQLVDSTAGHSLLSFIDAF 651

Query: 146 SGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQR 18
           SGYNQI M   +EE T +IT  GL+CY VMPFGLKNAGATYQR
Sbjct: 652 SGYNQIPMDEQDEENTTYITNMGLFCYRVMPFGLKNAGATYQR 694



 Score = 83.2 bits (204), Expect(2) = 6e-59
 Identities = 40/99 (40%), Positives = 61/99 (61%)
 Frame = -3

Query: 648 RAQPAEELEKVYLHPSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPA 469
           R +P E+LE+V +  S+P + + IG  L   V+  L+KCL    D+FAWS++D PGI+  
Sbjct: 485 RQEPVEKLEEVAVSKSNPSRVVKIGSGLVGAVRGKLVKCLQSRADIFAWSHEDTPGINRG 544

Query: 468 IITHHLNVDPNKKPVQQKKRKAAPERQKFINEQVEQYLK 352
           +  H L +    +PV+QK+R    ER + IN +VE+ LK
Sbjct: 545 VACHKLAIKKEARPVRQKRRCFNQERYEAINAEVEKLLK 583


>ref|XP_004292410.1| PREDICTED: uncharacterized protein LOC101297116 [Fragaria vesca
           subsp. vesca]
          Length = 727

 Score =  177 bits (450), Expect(2) = 8e-59
 Identities = 79/110 (71%), Positives = 96/110 (87%)
 Frame = -1

Query: 332 VLYPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMD 153
           V YPTWV+N+V+V K +GKWRMCVD+T+LNKACP D FPL RIDQLV+ST+G ++L F+D
Sbjct: 133 VSYPTWVSNVVMVPKPNGKWRMCVDYTNLNKACPMDSFPLSRIDQLVNSTAGYKMLNFLD 192

Query: 152 AFSGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVNLM 3
           A+SGYNQI+MH  N+E T F+T++GLYCY VMPFGLKNAGATYQRLVN M
Sbjct: 193 AYSGYNQIKMHPTNQEHTTFVTDKGLYCYGVMPFGLKNAGATYQRLVNAM 242



 Score = 76.3 bits (186), Expect(2) = 8e-59
 Identities = 39/96 (40%), Positives = 58/96 (60%)
 Frame = -3

Query: 648 RAQPAEELEKVYLHPSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPA 469
           R  PAEE E V    + P++ + IG+ L   +++ L+  L D   +FAWSY DMP I P 
Sbjct: 28  RPNPAEETEWVSQSTNAPERKVRIGNNLDPELRQKLITFLQDKHAVFAWSYADMPSISPD 87

Query: 468 IITHHLNVDPNKKPVQQKKRKAAPERQKFINEQVEQ 361
           IITH LN+  +  PV+QK+R   PE+ + I  +V++
Sbjct: 88  IITHKLNILKDYPPVRQKRRAFNPEKYRAIQAEVQR 123


>ref|XP_004308263.1| PREDICTED: uncharacterized protein LOC101303281 [Fragaria vesca
           subsp. vesca]
          Length = 488

 Score =  179 bits (455), Expect(2) = 2e-57
 Identities = 79/110 (71%), Positives = 97/110 (88%)
 Frame = -1

Query: 332 VLYPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMD 153
           + YPTWV+N+V+V K +GKWRMCVD+T+LNKACP D FPLPRIDQLVDST G ++L+F+D
Sbjct: 342 ISYPTWVSNVVMVPKPNGKWRMCVDYTNLNKACPMDSFPLPRIDQLVDSTVGFKMLSFLD 401

Query: 152 AFSGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVNLM 3
           A+SGYNQI+MH  ++E T F+T++GLYCY VMPFGLKNAGATYQRLVN M
Sbjct: 402 AYSGYNQIKMHPTDQEHTTFVTDKGLYCYEVMPFGLKNAGATYQRLVNAM 451



 Score = 69.7 bits (169), Expect(2) = 2e-57
 Identities = 37/96 (38%), Positives = 55/96 (57%)
 Frame = -3

Query: 648 RAQPAEELEKVYLHPSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPA 469
           R  PAE+ E V L PS P++ + I   L   + + L+  L D   +F WSY DMP I P 
Sbjct: 237 RPNPAEDTEWVSLSPSAPERKVRIATNLDRELHQKLITFLQDKQTVFVWSYADMPDIFPD 296

Query: 468 IITHHLNVDPNKKPVQQKKRKAAPERQKFINEQVEQ 361
           +ITH LN+  +  PV+QK+R    E+ + I  +V++
Sbjct: 297 VITHKLNILKDYPPVKQKRRAFNLEKYRAIQAKVQR 332


>dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
          Length = 1542

 Score =  160 bits (405), Expect(2) = 1e-55
 Identities = 77/106 (72%), Positives = 87/106 (82%)
 Frame = -1

Query: 326  YPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAF 147
            Y  W++N++LVKKAS   RMCVDFTDLNKACPKD FPL +IDQLVDST+G+ LL+FMD F
Sbjct: 816  YSEWISNVILVKKAS---RMCVDFTDLNKACPKDSFPLQKIDQLVDSTAGHSLLSFMDTF 872

Query: 146  SGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVN 9
            SGYNQI M   +EE T FIT  GL+CY VMPFGLKN GATYQRLVN
Sbjct: 873  SGYNQIPMDEQDEESTTFITNIGLFCYRVMPFGLKNTGATYQRLVN 918



 Score = 82.8 bits (203), Expect(2) = 1e-55
 Identities = 41/99 (41%), Positives = 62/99 (62%)
 Frame = -3

Query: 648  RAQPAEELEKVYLHPSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPA 469
            R +P E+L++V+++ S+P + + IG  L + +K  L+K L    D+FAWS++DMP ID  
Sbjct: 709  RQEPVEKLDEVFVNKSNPSRMVKIGSGLGETIKGELVKYLQSYADIFAWSHEDMPRIDHG 768

Query: 468  IITHHLNVDPNKKPVQQKKRKAAPERQKFINEQVEQYLK 352
            I  H L +     PV+QK+R    ER + IN +VEQ LK
Sbjct: 769  IAYHKLAIRKGAMPVRQKRRCFNQERYEAINAEVEQLLK 807


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  180 bits (457), Expect(2) = 2e-55
 Identities = 84/110 (76%), Positives = 98/110 (89%)
 Frame = -1

Query: 332 VLYPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMD 153
           V YP WVAN V+VKK +GK R+C+DFTDLNKACPKD FPLP ID+LV+ST+GNELLTFMD
Sbjct: 53  VQYPEWVANTVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHIDRLVESTAGNELLTFMD 112

Query: 152 AFSGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVNLM 3
           AFSG NQI M+ +++EKT+FIT+RG+YCY VMPFGLKNAGATYQRLVN M
Sbjct: 113 AFSGSNQIMMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATYQRLVNKM 162



 Score = 62.0 bits (149), Expect(2) = 2e-55
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = -3

Query: 489 MPGIDPAIITHHLNVDPNKKPVQQKKRKAAPERQKFINEQVEQYLK 352
           MPGI+P+II H LNVDP+ KPV+QK+RK   ER K +N++V++ LK
Sbjct: 1   MPGINPSIICHELNVDPSFKPVKQKRRKLGVERAKIVNDEVDKLLK 46


>ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623105 [Citrus sinensis]
          Length = 1407

 Score =  186 bits (472), Expect(2) = 4e-55
 Identities = 86/108 (79%), Positives = 98/108 (90%)
 Frame = -1

Query: 332  VLYPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMD 153
            V YP W++N+VLVKKA+GKWRMCVDFTDLNKACPKD FPLP+IDQLVDST+G+ LL+FMD
Sbjct: 904  VNYPEWISNVVLVKKANGKWRMCVDFTDLNKACPKDSFPLPKIDQLVDSTAGHGLLSFMD 963

Query: 152  AFSGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVN 9
            AFSGYNQI M+  +EE TAFIT +GL+CY VMPFGLKNAGATYQRLVN
Sbjct: 964  AFSGYNQIPMYEPDEESTAFITNQGLFCYRVMPFGLKNAGATYQRLVN 1011



 Score = 55.5 bits (132), Expect(2) = 4e-55
 Identities = 23/55 (41%), Positives = 38/55 (69%)
 Frame = -3

Query: 516  DLFAWSYDDMPGIDPAIITHHLNVDPNKKPVQQKKRKAAPERQKFINEQVEQYLK 352
            D+FAW+++DMPGIDP +  H L +    + V+QK+R    ER + +N++VE+ L+
Sbjct: 843  DVFAWTHEDMPGIDPEVACHKLAMKKGARAVRQKRRCFNQERYEAVNDEVEKLLR 897


>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
          Length = 1189

 Score =  154 bits (389), Expect(2) = 5e-55
 Identities = 70/106 (66%), Positives = 85/106 (80%)
 Frame = -1

Query: 326 YPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAF 147
           +P WVAN+V V K +GK R+C+DF DLN ACPKD FPLP  D ++D+T G E ++FMD F
Sbjct: 212 HPDWVANIVPVPKKNGKVRICIDFRDLNAACPKDEFPLPITDVMIDNTCGYERMSFMDGF 271

Query: 146 SGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVN 9
           SGYNQI+MH D+E+ TAF T  G+YCYTVMPFGLKNAGATYQR +N
Sbjct: 272 SGYNQIKMHPDDEKHTAFRTPLGVYCYTVMPFGLKNAGATYQRAMN 317



 Score = 87.0 bits (214), Expect(2) = 5e-55
 Identities = 38/99 (38%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
 Frame = -3

Query: 648 RAQPAEE-LEKVYLHPSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDP 472
           R  P E+ + +V +   H  KP+ I   LS   K  L+  + + +D+FAW+Y+DMPG+DP
Sbjct: 104 REPPTEDKVIQVNMGDEHDPKPIFIAEDLSSSEKEDLISLIREYIDVFAWNYEDMPGLDP 163

Query: 471 AIITHHLNVDPNKKPVQQKKRKAAPERQKFINEQVEQYL 355
            +  HHLN+DP+ KPV+Q++R+  PE  + I  +V++ +
Sbjct: 164 KVAMHHLNIDPDAKPVKQQQRRFRPEIMESIESEVKKLI 202


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score =  167 bits (423), Expect(2) = 2e-53
 Identities = 75/107 (70%), Positives = 94/107 (87%)
 Frame = -1

Query: 332  VLYPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMD 153
            V++P W+AN VLVKKA+GKWRMC+DFTDLNKACPKD FPLPRIDQLVD+T+G EL++F+D
Sbjct: 1019 VMHPEWLANPVLVKKANGKWRMCIDFTDLNKACPKDDFPLPRIDQLVDATAGCELMSFLD 1078

Query: 152  AFSGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLV 12
            A+SGY+Q+ M  ++EEKT+FIT  G YC+  MPFGLKNAGAT+ RL+
Sbjct: 1079 AYSGYHQVFMVKEDEEKTSFITPFGTYCFIRMPFGLKNAGATFARLI 1125



 Score = 68.6 bits (166), Expect(2) = 2e-53
 Identities = 33/96 (34%), Positives = 58/96 (60%)
 Frame = -3

Query: 639  PAEELEKVYLHPSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPAIIT 460
            P  + +KV L    P K +LIG  L   ++  +LK + +N+ +FAWS D++ G+D ++I 
Sbjct: 917  PEGKTKKVQLDEHDPGKFILIGENLEKHIEEEILKVVKENMAVFAWSPDELQGVDRSLIE 976

Query: 459  HHLNVDPNKKPVQQKKRKAAPERQKFINEQVEQYLK 352
            H+L +    KP +QK R+ + +RQ+    ++E+ LK
Sbjct: 977  HNLAIKSGYKPKKQKLRRMSTDRQQAAKIELEKLLK 1012


>gb|AAT85251.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1863

 Score =  167 bits (422), Expect(2) = 2e-53
 Identities = 75/109 (68%), Positives = 93/109 (85%)
 Frame = -1

Query: 332  VLYPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMD 153
            V++P W+AN V+V KA+GK RMC+D+TDLNKACPKDP+PLPRIDQ+VDST+G +LL F+D
Sbjct: 759  VIHPEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQIVDSTAGCDLLCFLD 818

Query: 152  AFSGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVNL 6
            A+SGY+QIRM  ++EEKTAFIT  G YCYT MPFGLKNAG T+QR   +
Sbjct: 819  AYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRI 867



 Score = 68.9 bits (167), Expect(2) = 2e-53
 Identities = 37/91 (40%), Positives = 51/91 (56%)
 Frame = -3

Query: 624 EKVYLHPSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPAIITHHLNV 445
           E  +L PS P+         +D  +  L+  L  N D+FAW   DMPG+   +I H L V
Sbjct: 670 EAQHLRPSRPEA--------ADDHEDALVSFLRANADVFAWRPADMPGVPREVIEHRLAV 721

Query: 444 DPNKKPVQQKKRKAAPERQKFINEQVEQYLK 352
            P  +PV+QK R+ APERQ FI E+V + L+
Sbjct: 722 RPGARPVRQKVRRQAPERQAFIREEVARLLE 752


>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score =  167 bits (422), Expect(2) = 3e-53
 Identities = 75/107 (70%), Positives = 94/107 (87%)
 Frame = -1

Query: 332  VLYPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMD 153
            V++P W+AN VLVKKA+GKWRMC+DFTDLNKACPKD FPLPRIDQLVD+T+G EL++F+D
Sbjct: 1019 VMHPEWLANPVLVKKANGKWRMCIDFTDLNKACPKDDFPLPRIDQLVDATAGCELMSFLD 1078

Query: 152  AFSGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLV 12
            A+SGY+Q+ M  ++EEKT+FIT  G YC+  MPFGLKNAGAT+ RL+
Sbjct: 1079 AYSGYHQVFMVKEDEEKTSFITPFGSYCFIRMPFGLKNAGATFARLI 1125



 Score = 68.6 bits (166), Expect(2) = 3e-53
 Identities = 33/96 (34%), Positives = 58/96 (60%)
 Frame = -3

Query: 639  PAEELEKVYLHPSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPAIIT 460
            P  + +KV L    P K +LIG  L   ++  +LK + +N+ +FAWS D++ G+D ++I 
Sbjct: 917  PEGKTKKVQLDEHDPGKFILIGENLEKHIEEEILKVVKENMAVFAWSPDELQGVDRSLIE 976

Query: 459  HHLNVDPNKKPVQQKKRKAAPERQKFINEQVEQYLK 352
            H+L +    KP +QK R+ + +RQ+    ++E+ LK
Sbjct: 977  HNLAIKSGYKPKKQKLRRMSTDRQQAAKIELEKLLK 1012


>gb|ABF98885.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2012

 Score =  167 bits (422), Expect(2) = 5e-53
 Identities = 75/109 (68%), Positives = 93/109 (85%)
 Frame = -1

Query: 332  VLYPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMD 153
            V++P W+AN V+V KA+GK RMC+D+TDLNKACPKDP+PLPRIDQ+VDST+G +LL F+D
Sbjct: 861  VIHPEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQIVDSTAGCDLLCFLD 920

Query: 152  AFSGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVNL 6
            A+SGY+QIRM  ++EEKTAFIT  G YCYT MPFGLKNAG T+QR   +
Sbjct: 921  AYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRI 969



 Score = 67.8 bits (164), Expect(2) = 5e-53
 Identities = 34/85 (40%), Positives = 50/85 (58%)
 Frame = -3

Query: 606  PSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPAIITHHLNVDPNKKP 427
            P+ P + ++ G  +    +  L+  L  N D+FAW   DMPG+   +I H L V P  +P
Sbjct: 770  PATPRQRMITGDEVPVKEEDALVSFLWANADVFAWRPADMPGVPREVIEHRLAVRPGARP 829

Query: 426  VQQKKRKAAPERQKFINEQVEQYLK 352
            V+QK R+ APERQ FI E+V + L+
Sbjct: 830  VRQKVRRQAPERQAFIREEVARLLE 854


>gb|AAL58969.1|AC091811_18 putative gag-pol precursor [Oryza sativa Japonica Group]
          Length = 1997

 Score =  167 bits (422), Expect(2) = 5e-53
 Identities = 75/109 (68%), Positives = 93/109 (85%)
 Frame = -1

Query: 332  VLYPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMD 153
            V++P W+AN V+V KA+GK RMC+D+TDLNKACPKDP+PLPRIDQ+VDST+G +LL F+D
Sbjct: 861  VIHPEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQIVDSTAGCDLLCFLD 920

Query: 152  AFSGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVNL 6
            A+SGY+QIRM  ++EEKTAFIT  G YCYT MPFGLKNAG T+QR   +
Sbjct: 921  AYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRI 969



 Score = 67.8 bits (164), Expect(2) = 5e-53
 Identities = 34/85 (40%), Positives = 50/85 (58%)
 Frame = -3

Query: 606  PSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPAIITHHLNVDPNKKP 427
            P+ P + ++ G  +    +  L+  L  N D+FAW   DMPG+   +I H L V P  +P
Sbjct: 770  PATPRQRMITGDEVPVKEEDALVSFLWANADVFAWRPADMPGVPREVIEHRLAVRPGARP 829

Query: 426  VQQKKRKAAPERQKFINEQVEQYLK 352
            V+QK R+ APERQ FI E+V + L+
Sbjct: 830  VRQKVRRQAPERQAFIREEVARLLE 854


>gb|AAX96829.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|77550075|gb|ABA92872.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1914

 Score =  167 bits (424), Expect(2) = 6e-53
 Identities = 75/109 (68%), Positives = 93/109 (85%)
 Frame = -1

Query: 332  VLYPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMD 153
            V++P W+AN V+V KA+GK RMC+D+TDLNKACPKDP+PLPRIDQ+VDST+G +LL F+D
Sbjct: 746  VIHPEWLANAVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQIVDSTAGCDLLCFLD 805

Query: 152  AFSGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVNL 6
            A+SGY+QIRM  ++EEKTAFIT  G YCYT MPFGLKNAG T+QR   +
Sbjct: 806  AYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRI 854



 Score = 66.6 bits (161), Expect(2) = 6e-53
 Identities = 34/85 (40%), Positives = 50/85 (58%)
 Frame = -3

Query: 606 PSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPAIITHHLNVDPNKKP 427
           P+ P + ++ G  + +     L+  L  N D+FAW   DMPG+   +I H L V P  +P
Sbjct: 658 PATPRQRMITGDEVPEDA---LVSFLRANADVFAWRPADMPGVPREVIEHRLAVRPGARP 714

Query: 426 VQQKKRKAAPERQKFINEQVEQYLK 352
           V+QK R+ APERQ FI E+V + L+
Sbjct: 715 VRQKVRRQAPERQAFIREEVARLLE 739


>gb|AAX95884.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1920

 Score =  167 bits (422), Expect(2) = 8e-53
 Identities = 75/109 (68%), Positives = 93/109 (85%)
 Frame = -1

Query: 332  VLYPTWVANLVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMD 153
            V++P W+AN V+V KA+GK RMC+D+TDLNKACPKDP+PLPRIDQ+VDST+G +LL F+D
Sbjct: 859  VIHPEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQIVDSTAGCDLLCFLD 918

Query: 152  AFSGYNQIRMHLDNEEKTAFITERGLYCYTVMPFGLKNAGATYQRLVNL 6
            A+SGY+QIRM  ++EEKTAFIT  G YCYT MPFGLKNAG T+QR   +
Sbjct: 919  AYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRI 967



 Score = 67.0 bits (162), Expect(2) = 8e-53
 Identities = 34/85 (40%), Positives = 50/85 (58%)
 Frame = -3

Query: 606  PSHPDKPLLIGHALSDGVKRTLLKCLHDNLDLFAWSYDDMPGIDPAIITHHLNVDPNKKP 427
            P+ P + ++ G  + +     L+  L  N D+FAW   DMPG+   +I H L V P  +P
Sbjct: 771  PATPRQRMITGDEVPEDA---LVSFLRANADVFAWRPTDMPGVPREVIEHRLAVRPGARP 827

Query: 426  VQQKKRKAAPERQKFINEQVEQYLK 352
            V+QK R+ APERQ FI E+V + L+
Sbjct: 828  VRQKVRRQAPERQAFIREEVARLLE 852