BLASTX nr result
ID: Stemona21_contig00026717
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00026717
(1200 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [... 325 2e-86
emb|CBI31382.3| unnamed protein product [Vitis vinifera] 325 2e-86
dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sa... 318 3e-84
gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [The... 317 5e-84
gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [The... 317 6e-84
gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japo... 317 8e-84
ref|XP_006648144.1| PREDICTED: RNA-binding protein Nova-2-like, ... 316 1e-83
gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao] 315 2e-83
ref|XP_006398901.1| hypothetical protein EUTSA_v10014068mg [Eutr... 311 3e-82
ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like i... 311 4e-82
ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Popu... 310 6e-82
ref|XP_002532622.1| Far upstream element-binding protein, putati... 310 6e-82
ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [S... 310 8e-82
ref|NP_196063.1| TOMV RNA binding protein [Arabidopsis thaliana]... 310 1e-81
ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like i... 309 2e-81
ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [... 308 3e-81
ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [... 308 3e-81
ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arab... 308 4e-81
ref|XP_006398902.1| hypothetical protein EUTSA_v10014068mg [Eutr... 307 6e-81
ref|NP_850764.1| TOMV RNA binding protein [Arabidopsis thaliana]... 306 8e-81
>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 325 bits (834), Expect = 2e-86
Identities = 177/303 (58%), Positives = 227/303 (74%), Gaps = 5/303 (1%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
PP+SP +D +K T+IRFLVSN AAG VIGKGGS+I + Q+Q GA IQLSRN+E+FP TS
Sbjct: 21 PPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTS 80
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNEVKENNDDGS--KSNVRLIVPHSSCGGLIGKGGS 374
DRI M+SG NE++ ++LIL KLL+E+ + D + +S VRLIVP+SSCGG+IGKGGS
Sbjct: 81 DRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGS 140
Query: 375 TIKSFIEDSQAVIKISPR---YVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
TIKSFIEDSQA IKISP+ Y+G DRL+T+ GSLEEQ+RA LILSKLTED HY+
Sbjct: 141 TIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFM 200
Query: 546 HSLYPYAAGFAMPSLPYKAMLYGMNDNGGEHPINKGAISSPSGSFKGSLLLSIADEFMGL 725
++ + YAA Y +M YG N GG+ NK S+ S+ + +ADE +GL
Sbjct: 201 NAPFSYAAA-------YNSMNYGPNGAGGKFQNNKEDRSN-------SVTIGVADEHIGL 246
Query: 726 VIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSIHMAEAMIMLKIPSN 905
V+GRGGRN+M+ISQ +GARIKIS+RGDFMSGT++RKVTI+GS ++I AE+MIM K+ S
Sbjct: 247 VVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASA 306
Query: 906 SDR 914
S+R
Sbjct: 307 SER 309
>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 325 bits (834), Expect = 2e-86
Identities = 177/303 (58%), Positives = 227/303 (74%), Gaps = 5/303 (1%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
PP+SP +D +K T+IRFLVSN AAG VIGKGGS+I + Q+Q GA IQLSRN+E+FP TS
Sbjct: 69 PPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTS 128
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNEVKENNDDGS--KSNVRLIVPHSSCGGLIGKGGS 374
DRI M+SG NE++ ++LIL KLL+E+ + D + +S VRLIVP+SSCGG+IGKGGS
Sbjct: 129 DRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGS 188
Query: 375 TIKSFIEDSQAVIKISPR---YVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
TIKSFIEDSQA IKISP+ Y+G DRL+T+ GSLEEQ+RA LILSKLTED HY+
Sbjct: 189 TIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFM 248
Query: 546 HSLYPYAAGFAMPSLPYKAMLYGMNDNGGEHPINKGAISSPSGSFKGSLLLSIADEFMGL 725
++ + YAA Y +M YG N GG+ NK S+ S+ + +ADE +GL
Sbjct: 249 NAPFSYAAA-------YNSMNYGPNGAGGKFQNNKEDRSN-------SVTIGVADEHIGL 294
Query: 726 VIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSIHMAEAMIMLKIPSN 905
V+GRGGRN+M+ISQ +GARIKIS+RGDFMSGT++RKVTI+GS ++I AE+MIM K+ S
Sbjct: 295 VVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASA 354
Query: 906 SDR 914
S+R
Sbjct: 355 SER 357
>dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein
NOVA-like [Oryza sativa Japonica Group]
Length = 343
Score = 318 bits (815), Expect = 3e-84
Identities = 176/330 (53%), Positives = 234/330 (70%), Gaps = 26/330 (7%)
Frame = +3
Query: 3 AADQCLPPKSPPA--------DGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAH 158
+A + P SPP D K+K TH+RFLVSNTAAG +IGKGGS+I E Q+Q GA
Sbjct: 14 SAPKRAPRSSPPPPQQQASSEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGAR 73
Query: 159 IQLSRNYEYFPTTSDRIAMVSGGFNEVMDGLKLILEKLLNEVKENNDDGSKSNVRLIVPH 338
IQLSR++E+FP T+DRI MVSG F+EV+ ++LILEKLL E +E+N+ ++ VRL+VP+
Sbjct: 74 IQLSRSHEFFPGTNDRIIMVSGLFDEVIKAMELILEKLLAEGEESNEAEARPKVRLVVPN 133
Query: 339 SSCGGLIGKGGSTIKSFIEDSQAVIKISPR---YVGFDDRLITVTGSLEEQLRAAFLILS 509
SSCGG+IGKGGSTIKSFIEDS A IKISP+ +VG DRL+TVTG L+ Q+RA +LILS
Sbjct: 134 SSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILS 193
Query: 510 KLTEDGHYSDSKHSLYPYA-----------AGFAMPSLPY-KAMLYGMNDNGGEHPINKG 653
KL+ED HY + S +PYA G+ +P +PY A+ YG N GG + NK
Sbjct: 194 KLSEDVHYPPNLSSPFPYAGLGFPSYPGVPVGYMIPQVPYNNAVNYGPNGYGGRYQNNKP 253
Query: 654 AI---SSPSGSFKGSLLLSIADEFMGLVIGRGGRNLMEISQVTGARIKISERGDFMSGTS 824
+ S + + SL + IADE +G V+GR GRN+ EI Q +GARIKIS+RGDF++GTS
Sbjct: 254 STPMRSPANNDAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTS 313
Query: 825 NRKVTISGSLKSIHMAEAMIMLKIPSNSDR 914
RKVTI+G+ ++I AE+MIM ++ ++S+R
Sbjct: 314 ERKVTITGTSEAIQAAESMIMQRVTASSER 343
>gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
Length = 314
Score = 317 bits (813), Expect = 5e-84
Identities = 171/303 (56%), Positives = 227/303 (74%), Gaps = 5/303 (1%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
PPKSP ++ +K T+IRFLVSN AAG VIGKGGS+I E Q++ GA IQLSRN+E+FP TS
Sbjct: 22 PPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFFPGTS 81
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNE--VKENNDDGSKSNVRLIVPHSSCGGLIGKGGS 374
DRI M+SG +EV+ ++LIL KLLNE +++N+D ++ VRLIVP+SSCG +IGKGG+
Sbjct: 82 DRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIGKGGA 141
Query: 375 TIKSFIEDSQAVIKISPR---YVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
TIKSFIEDSQA IKISP+ + G +DRL+T+TG+L+EQ+RA LILSKL+ED HY +
Sbjct: 142 TIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHYLQAM 201
Query: 546 HSLYPYAAGFAMPSLPYKAMLYGMNDNGGEHPINKGAISSPSGSFKGSLLLSIADEFMGL 725
H+ + YAA Y +M Y N GG+ +K S+ S+ + +AD +GL
Sbjct: 202 HAPFSYAAA------TYNSMSYPSNGAGGKFQNHKEDRSN-------SVTIGVADGHIGL 248
Query: 726 VIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSIHMAEAMIMLKIPSN 905
V+GRGGRN+MEISQ++GARIKIS+RGDFMSGT++RKVTI+GS ++I AE+MIM K+
Sbjct: 249 VLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYA 308
Query: 906 SDR 914
+DR
Sbjct: 309 TDR 311
>gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
Length = 313
Score = 317 bits (812), Expect = 6e-84
Identities = 171/303 (56%), Positives = 227/303 (74%), Gaps = 5/303 (1%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
PPKSP ++ +K T+IRFLVSN AAG VIGKGGS+I E Q++ GA IQLSRN+E+FP TS
Sbjct: 22 PPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFFPGTS 81
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNE--VKENNDDGSKSNVRLIVPHSSCGGLIGKGGS 374
DRI M+SG +EV+ ++LIL KLLNE +++N+D ++ VRLIVP+SSCG +IGKGG+
Sbjct: 82 DRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIGKGGA 141
Query: 375 TIKSFIEDSQAVIKISPR---YVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
TIKSFIEDSQA IKISP+ + G +DRL+T+TG+L+EQ+RA LILSKL+ED HY +
Sbjct: 142 TIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHYLQAM 201
Query: 546 HSLYPYAAGFAMPSLPYKAMLYGMNDNGGEHPINKGAISSPSGSFKGSLLLSIADEFMGL 725
H+ + YAA Y +M Y N GG+ +K S+ S+ + +AD +GL
Sbjct: 202 HAPFSYAA-------TYNSMSYPSNGAGGKFQNHKEDRSN-------SVTIGVADGHIGL 247
Query: 726 VIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSIHMAEAMIMLKIPSN 905
V+GRGGRN+MEISQ++GARIKIS+RGDFMSGT++RKVTI+GS ++I AE+MIM K+
Sbjct: 248 VLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYA 307
Query: 906 SDR 914
+DR
Sbjct: 308 TDR 310
>gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 317 bits (811), Expect = 8e-84
Identities = 171/309 (55%), Positives = 227/309 (73%), Gaps = 18/309 (5%)
Frame = +3
Query: 42 DGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTSDRIAMVS 221
D K+K TH+RFLVSNTAAG +IGKGGS+I E Q+Q GA IQLSR++E+FP T+DRI MVS
Sbjct: 5 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVS 64
Query: 222 GGFNEVMDGLKLILEKLLNEVKENNDDGSKSNVRLIVPHSSCGGLIGKGGSTIKSFIEDS 401
G F+EV+ ++LILEKLL E +E+N+ ++ VRL+VP+SSCGG+IGKGGSTIKSFIEDS
Sbjct: 65 GLFDEVIKAMELILEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDS 124
Query: 402 QAVIKISPR---YVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSKHSLYPYA-- 566
A IKISP+ +VG DRL+TVTG L+ Q+RA +LILSKL+ED HY + S +PYA
Sbjct: 125 HAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPYAGL 184
Query: 567 ---------AGFAMPSLPY-KAMLYGMNDNGGEHPINKGAI---SSPSGSFKGSLLLSIA 707
G+ +P +PY A+ YG N GG + NK + S + + SL + IA
Sbjct: 185 GFPSYPGVPVGYMIPQVPYNNAVNYGPNGYGGRYQNNKPSTPMRSPANNDAQDSLTIGIA 244
Query: 708 DEFMGLVIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSIHMAEAMIM 887
DE +G V+GR GRN+ EI Q +GARIKIS+RGDF++GTS RKVTI+G+ ++I AE+MIM
Sbjct: 245 DEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAESMIM 304
Query: 888 LKIPSNSDR 914
++ ++S+R
Sbjct: 305 QRVTASSER 313
>ref|XP_006648144.1| PREDICTED: RNA-binding protein Nova-2-like, partial [Oryza
brachyantha]
Length = 321
Score = 316 bits (810), Expect = 1e-83
Identities = 173/320 (54%), Positives = 234/320 (73%), Gaps = 22/320 (6%)
Frame = +3
Query: 21 PPKSPPA--DGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPT 194
PP+ PP+ D K+K TH+RFLVSNTAAG +IGKGGS+I + Q+Q GA IQLSR++E+FP
Sbjct: 2 PPQHPPSSEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPG 61
Query: 195 TSDRIAMVSGGFNEVMDGLKLILEKLLNEVKENNDDGSKSNVRLIVPHSSCGGLIGKGGS 374
T+DRI MVSG F+EV+ ++LILEKLL E +E N+ ++ VRL+VP+SSCGG+IGKGG+
Sbjct: 62 TNDRIIMVSGLFDEVIKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGA 121
Query: 375 TIKSFIEDSQAVIKISPR---YVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
TIKSFIEDS A IKISP+ +VG DRL+TVTG L+ Q+RA +LILSKL+ED HY +
Sbjct: 122 TIKSFIEDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNL 181
Query: 546 HSLYPYA-----------AGFAMPSLPY-KAMLYGMNDN--GGEHPINKGAI---SSPSG 674
S +PYA G+ +P +PY + YG N+N GG + NK + S +
Sbjct: 182 SSPFPYAGLSFPSYPGVPVGYMIPQVPYNNPVNYGPNNNGYGGRYQNNKPSTPMRSPANN 241
Query: 675 SFKGSLLLSIADEFMGLVIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSL 854
+ SL + IADE +G V+GR GRN+ EI Q +GARIKIS+RGDF++GTS+RKVTI+G+
Sbjct: 242 DAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTITGTS 301
Query: 855 KSIHMAEAMIMLKIPSNSDR 914
++I AE+MIM ++ ++S+R
Sbjct: 302 EAIQAAESMIMQRVSASSER 321
>gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
Length = 334
Score = 315 bits (807), Expect = 2e-83
Identities = 172/317 (54%), Positives = 231/317 (72%), Gaps = 19/317 (5%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
PPKSP ++ +K T+IRFLVSN AAG VIGKGGS+I E Q++ GA IQLSRN+E+FP TS
Sbjct: 22 PPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFFPGTS 81
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNE--VKENNDDGSKSNVRLIVPHSSCGGLIGKGGS 374
DRI M+SG +EV+ ++LIL KLLNE +++N+D ++ VRLIVP+SSCG +IGKGG+
Sbjct: 82 DRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIGKGGA 141
Query: 375 TIKSFIEDSQAVIKISPR---YVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
TIKSFIEDSQA IKISP+ + G +DRL+T+TG+L+EQ+RA LILSKL+ED HY +
Sbjct: 142 TIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHYLQAM 201
Query: 546 HSLYPYAA-----------GFAMPSL---PYKAMLYGMNDNGGEHPINKGAISSPSGSFK 683
H+ + YA + +PS+ Y +M Y N GG+ +K S+
Sbjct: 202 HAPFSYAGIFFSGFHGIPYAYVLPSVATATYNSMSYPSNGAGGKFQNHKEDRSN------ 255
Query: 684 GSLLLSIADEFMGLVIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSI 863
S+ + +AD +GLV+GRGGRN+MEISQ++GARIKIS+RGDFMSGT++RKVTI+GS ++I
Sbjct: 256 -SVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAI 314
Query: 864 HMAEAMIMLKIPSNSDR 914
AE+MIM K+ +DR
Sbjct: 315 RQAESMIMQKVAYATDR 331
>ref|XP_006398901.1| hypothetical protein EUTSA_v10014068mg [Eutrema salsugineum]
gi|567170303|ref|XP_006398903.1| hypothetical protein
EUTSA_v10014068mg [Eutrema salsugineum]
gi|557099991|gb|ESQ40354.1| hypothetical protein
EUTSA_v10014068mg [Eutrema salsugineum]
gi|557099993|gb|ESQ40356.1| hypothetical protein
EUTSA_v10014068mg [Eutrema salsugineum]
Length = 313
Score = 311 bits (798), Expect = 3e-82
Identities = 167/303 (55%), Positives = 221/303 (72%), Gaps = 5/303 (1%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
P S AD +K THIRFLVSN AAG VIGKGGS+I E Q + GA IQLSRN E+FP T+
Sbjct: 22 PHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTT 81
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNEV--KENNDDGSKSNVRLIVPHSSCGGLIGKGGS 374
DRI M+SG EV++GL+LIL+KL +E+ ++ ND + +RL+VP+SSCGG+IGKGG+
Sbjct: 82 DRIIMISGSIKEVVNGLELILDKLHSELHAEDGNDVEPRRRIRLVVPNSSCGGIIGKGGA 141
Query: 375 TIKSFIEDSQAVIKISP---RYVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
TIKSFIE+S+A IKISP Y G DRL+T++G+ EEQ+RA LIL+KLT D HYS +
Sbjct: 142 TIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTFEEQMRAIDLILAKLTSDDHYSQNV 201
Query: 546 HSLYPYAAGFAMPSLPYKAMLYGMNDNGGEHPINKGAISSPSGSFKGSLLLSIADEFMGL 725
HS Y YAAG Y ++ Y N +GG++ +K S+ + + ++DE +GL
Sbjct: 202 HSPYSYAAG-------YNSVNYAPNGSGGKYQNHKEEAST-------TKTIGVSDEHIGL 247
Query: 726 VIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSIHMAEAMIMLKIPSN 905
V+GRGGRN+MEI+Q+TGARIKIS+RGDFMSGT++RKV+I+GS ++I AE MI K+ S
Sbjct: 248 VLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAIQQAETMIKQKVDSA 307
Query: 906 SDR 914
S+R
Sbjct: 308 SER 310
>ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Glycine max]
Length = 332
Score = 311 bits (796), Expect = 4e-82
Identities = 167/312 (53%), Positives = 227/312 (72%), Gaps = 14/312 (4%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
PPKSP D ++K T+IRFLVSN+AAG VIGKGGS+I + Q+Q GA IQLSRN+E+FP T+
Sbjct: 23 PPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTT 82
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNEV--KENNDDGSKSNVRLIVPHSSCGGLIGKGGS 374
DRI MVSG NE+ ++LIL KLL+E+ +++ND K+ VRL+VP+ SCGG+IGKGG+
Sbjct: 83 DRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGA 142
Query: 375 TIKSFIEDSQAVIKISPR---YVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
TI+SFIEDSQA IKISP+ Y G +DRL+T+TGS +EQ+RA LI+SKL+ED HY+ S
Sbjct: 143 TIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSM 202
Query: 546 HSLYPYAA------GFAMPSL---PYKAMLYGMNDNGGEHPINKGAISSPSGSFKGSLLL 698
+S + Y + +PS+ Y A+ Y N G G + + SL +
Sbjct: 203 NSPFSYPGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAG------GKLQNSKEERSNSLTM 256
Query: 699 SIADEFMGLVIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSIHMAEA 878
+ADE +GLV+GRGGRN+MEISQ +GARIKIS+RGD++SGT++RKVTI+GS ++I AE+
Sbjct: 257 GVADEHIGLVVGRGGRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAES 316
Query: 879 MIMLKIPSNSDR 914
MI+ K+ ++R
Sbjct: 317 MILQKVAYATER 328
>ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
gi|550330463|gb|ERP56589.1| hypothetical protein
POPTR_0010s23710g [Populus trichocarpa]
Length = 313
Score = 310 bits (795), Expect = 6e-82
Identities = 165/303 (54%), Positives = 221/303 (72%), Gaps = 5/303 (1%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
PP SPP+D ++K T+ RFLVSN AAG VIGKGG++I + Q+Q GA IQLSRNYE+FP TS
Sbjct: 22 PPASPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTS 81
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNEVKENNDDGS--KSNVRLIVPHSSCGGLIGKGGS 374
DRI MVSGG ++V+ ++LI+ KLL+E+ + D + + VRL+VP+S+CG +IGKGGS
Sbjct: 82 DRIIMVSGGIDDVLKAVELIIAKLLSEIPAEDGDEAEPRMRVRLVVPNSACGSIIGKGGS 141
Query: 375 TIKSFIEDSQAVIKISP---RYVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
IKSFIE+S A IKISP ++ G DRL+TVTG+LEEQ+ A LILSKLT+D HYS +
Sbjct: 142 IIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTLEEQMHAIDLILSKLTDDPHYSQTM 201
Query: 546 HSLYPYAAGFAMPSLPYKAMLYGMNDNGGEHPINKGAISSPSGSFKGSLLLSIADEFMGL 725
H+ + YAA Y +M +G N + NK I++ S+ + +ADE +GL
Sbjct: 202 HAPFSYAAA-------YNSMNHGPNGAAVKFQHNKDDITN-------SVTIGVADEHIGL 247
Query: 726 VIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSIHMAEAMIMLKIPSN 905
V+GRGGRN+MEISQ +GAR+KIS+RGDFMSGT++RK+TI+GS ++I AE MIM K+
Sbjct: 248 VVGRGGRNIMEISQTSGARLKISDRGDFMSGTTDRKITITGSQRAIRAAEDMIMQKVSYA 307
Query: 906 SDR 914
S+R
Sbjct: 308 SER 310
>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
gi|223527642|gb|EEF29753.1| Far upstream element-binding
protein, putative [Ricinus communis]
Length = 314
Score = 310 bits (795), Expect = 6e-82
Identities = 165/303 (54%), Positives = 224/303 (73%), Gaps = 5/303 (1%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
PPKSP +D +K T++RFLVSN AAG VIGKGG++I + Q+Q GA IQLSRNYE+FP TS
Sbjct: 23 PPKSPTSDSVEKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTS 82
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNEV--KENNDDGSKSNVRLIVPHSSCGGLIGKGGS 374
DRI ++SG ++V+ G++L+L KLL+E+ ++ +D ++ VRL+VP+SSCG +IGKGGS
Sbjct: 83 DRIILISGILDDVLKGVELVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIGKGGS 142
Query: 375 TIKSFIEDSQAVIKISPR---YVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
IKSFIE+SQA IKISP+ + G +DRL+TVTG+LEEQ+RA LILSKL +D HY +
Sbjct: 143 IIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEEQMRAIDLILSKLYDDPHYVQTM 202
Query: 546 HSLYPYAAGFAMPSLPYKAMLYGMNDNGGEHPINKGAISSPSGSFKGSLLLSIADEFMGL 725
H+ + YA + Y +M YG N GG+ NK ++ S+ + +AD +GL
Sbjct: 203 HAPFSYA-------VAYNSMNYGANGAGGKFQNNKEDRTN-------SVTIGVADAHIGL 248
Query: 726 VIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSIHMAEAMIMLKIPSN 905
V+GRGGRN+MEISQV+GARIKIS+RGDFMSGT++RK+ I+GS ++I AE MIM K+
Sbjct: 249 VVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKIIITGSQRAIRTAEGMIMQKVAYA 308
Query: 906 SDR 914
S+R
Sbjct: 309 SER 311
>ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein
SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 310 bits (794), Expect = 8e-82
Identities = 171/316 (54%), Positives = 227/316 (71%), Gaps = 19/316 (6%)
Frame = +3
Query: 24 PKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTSD 203
P S D K+K TH+RFLVSNTAAG +IGKGGS+I + Q+Q GA IQLSR++E+FP T+D
Sbjct: 28 PPSEEGDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTND 87
Query: 204 RIAMVSGGFNEVMDGLKLILEKLLNEVKENNDDGSKSNVRLIVPHSSCGGLIGKGGSTIK 383
RI MVSG F+EVM ++LILEKLL E +E N+ ++ VRL+VP+SSCGG+IGKGG+TIK
Sbjct: 88 RIIMVSGLFDEVMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIK 147
Query: 384 SFIEDSQAVIKISPR---YVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSKHSL 554
SFIE+S A IKISP+ YVG DRL+TVTG+ + Q+ A LIL KL+ED HY + S
Sbjct: 148 SFIEESHAGIKISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPPNLSSP 207
Query: 555 YPYA-----------AGFAMPSLPY-KAMLYGMNDN-GGEHPINKGAI---SSPSGSFKG 686
+PYA G+ +P +PY A+ YG N+ GG + NK + S S +
Sbjct: 208 FPYAGLTFPNYPGVPVGYMIPQVPYNNAVNYGPNNGYGGRYQNNKPSTPMRSPASNEAQE 267
Query: 687 SLLLSIADEFMGLVIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSIH 866
SL + IADE +G V+GR GRN+ EI Q +GARIKIS+RGDF+SGTS+RKVTI+G+ ++I
Sbjct: 268 SLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFISGTSDRKVTITGTSEAIR 327
Query: 867 MAEAMIMLKIPSNSDR 914
AE+MIM ++ ++S+R
Sbjct: 328 TAESMIMQRVSASSER 343
>ref|NP_196063.1| TOMV RNA binding protein [Arabidopsis thaliana]
gi|14030641|gb|AAK52995.1|AF375411_1 AT5g04430/T32M21_30
[Arabidopsis thaliana] gi|7406447|emb|CAB85549.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|21554568|gb|AAM63617.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|23507775|gb|AAN38691.1|
At5g04430/T32M21_30 [Arabidopsis thaliana]
gi|332003361|gb|AED90744.1| TOMV RNA binding protein
[Arabidopsis thaliana]
Length = 313
Score = 310 bits (793), Expect = 1e-81
Identities = 165/303 (54%), Positives = 222/303 (73%), Gaps = 5/303 (1%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
P S AD +K THIRFLVSN AAG VIGKGGS+I E Q + GA IQLSRN E+FP T+
Sbjct: 22 PHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTT 81
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNEV--KENNDDGSKSNVRLIVPHSSCGGLIGKGGS 374
DRI M+SG EV++GL+LIL+KL +E+ ++ N+ + +RL+VP+SSCGG+IGKGG+
Sbjct: 82 DRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGA 141
Query: 375 TIKSFIEDSQAVIKISP---RYVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
TIKSFIE+S+A IKISP + G DRL+T++G+ EEQ+RA LIL+KLTED HYS +
Sbjct: 142 TIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNV 201
Query: 546 HSLYPYAAGFAMPSLPYKAMLYGMNDNGGEHPINKGAISSPSGSFKGSLLLSIADEFMGL 725
HS Y YAAG Y ++ Y N +GG++ +K S+ ++ + +ADE +GL
Sbjct: 202 HSPYSYAAG-------YNSVNYAPNGSGGKYQNHKEEAST-------TVTIGVADEHIGL 247
Query: 726 VIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSIHMAEAMIMLKIPSN 905
V+GRGGRN+MEI+Q+TGARIKIS+RGDFMSGT++RKV+I+G ++I AE MI K+ S
Sbjct: 248 VLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSA 307
Query: 906 SDR 914
++R
Sbjct: 308 TER 310
>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Glycine max]
Length = 337
Score = 309 bits (791), Expect = 2e-81
Identities = 167/317 (52%), Positives = 227/317 (71%), Gaps = 19/317 (5%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
PPKSP D ++K T+IRFLVSN+AAG VIGKGGS+I + Q+Q GA IQLSRN+E+FP T+
Sbjct: 23 PPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTT 82
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNEV--KENNDDGSKSNVRLIVPHSSCGGLIGKGGS 374
DRI MVSG NE+ ++LIL KLL+E+ +++ND K+ VRL+VP+ SCGG+IGKGG+
Sbjct: 83 DRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGA 142
Query: 375 TIKSFIEDSQAVIKISPR---YVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
TI+SFIEDSQA IKISP+ Y G +DRL+T+TGS +EQ+RA LI+SKL+ED HY+ S
Sbjct: 143 TIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSM 202
Query: 546 HSLYPYAA-----------GFAMPSL---PYKAMLYGMNDNGGEHPINKGAISSPSGSFK 683
+S + Y + +PS+ Y A+ Y N G G + +
Sbjct: 203 NSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAG------GKLQNSKEERS 256
Query: 684 GSLLLSIADEFMGLVIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSI 863
SL + +ADE +GLV+GRGGRN+MEISQ +GARIKIS+RGD++SGT++RKVTI+GS ++I
Sbjct: 257 NSLTMGVADEHIGLVVGRGGRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAI 316
Query: 864 HMAEAMIMLKIPSNSDR 914
AE+MI+ K+ ++R
Sbjct: 317 RTAESMILQKVAYATER 333
>ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding
protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 308 bits (789), Expect = 3e-81
Identities = 169/308 (54%), Positives = 221/308 (71%), Gaps = 10/308 (3%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
PPKSP +D +K T+IRFLVSN AAG VIGKGGS+I + Q+Q GA IQLSRN+E+FP T+
Sbjct: 22 PPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTT 81
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNEV--KENNDDGSKSNVRLIVPHSSCGGLIGKGGS 374
DRI MVSG NE++ ++L+L KLL+E+ +E +D ++ VRLIVPHSSCG +IGKGGS
Sbjct: 82 DRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGS 141
Query: 375 TIKSFIEDSQAVIKISPR---YVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
TIKSFIEDSQA IKISP+ Y+ DRL+T++G++EEQ+RA LI+SKL+ED HY+ S
Sbjct: 142 TIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSM 201
Query: 546 HSLYPYAAGFAMPSLPYKAMLYGMN--DNGGEHPINKGAISSP---SGSFKGSLLLSIAD 710
+ + Y F AM YG N GG NK S SL + ++D
Sbjct: 202 NYPFSYPTSF-------NAMNYGSNGGGTGGRFQNNKPDTRSSEIVQEERNNSLTIGVSD 254
Query: 711 EFMGLVIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSIHMAEAMIML 890
+GLV+GRGGRN++EISQ +GARIKIS+RGDFMSGT++RKVTI+GS ++I AE+MI+
Sbjct: 255 GHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQ 314
Query: 891 KIPSNSDR 914
K+ S+R
Sbjct: 315 KVAYASER 322
>ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 308 bits (789), Expect = 3e-81
Identities = 165/316 (52%), Positives = 228/316 (72%), Gaps = 19/316 (6%)
Frame = +3
Query: 24 PKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTSD 203
P++ P D K+K TH+RFLVSNTAAG +IGKGGS+I + Q+Q GA IQLSR++E+FP T+D
Sbjct: 34 PEAEPEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTND 93
Query: 204 RIAMVSGGFNEVMDGLKLILEKLLNEVKENNDDGSKSNVRLIVPHSSCGGLIGKGGSTIK 383
RI MVSG F+EV+ ++L+LEKLL E +E N+ ++ RL+VP+SSCGG+IGKGG+TIK
Sbjct: 94 RIIMVSGLFDEVIKAMELVLEKLLAEGEEFNEAEARPKFRLVVPNSSCGGIIGKGGATIK 153
Query: 384 SFIEDSQAVIKISPR---YVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSKHSL 554
+FIEDS A IKISP+ +VG DRL+T+TG Q+RA +LILSKL+ED HY + S
Sbjct: 154 AFIEDSHAGIKISPQDNNFVGLHDRLVTITGPFNNQMRAIYLILSKLSEDVHYPPNLSSP 213
Query: 555 YPYA------------AGFAMPSLPY-KAMLYGMNDNGGEHPINKGA--ISSP-SGSFKG 686
+PYA G+ +P +PY A+ YG N GG + NK + SP + +
Sbjct: 214 FPYAGLGFPSYPAPVPVGYMIPQVPYNNAVNYGPNGYGGRYQNNKPGTPVRSPATNDAQE 273
Query: 687 SLLLSIADEFMGLVIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSIH 866
S + +ADE +G V+GR GRN+ EI Q +GARIKIS+RGDF++GTS+RKVTI+G+ ++I
Sbjct: 274 SHTIGVADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTITGTPEAIQ 333
Query: 867 MAEAMIMLKIPSNSDR 914
AE+MIM ++ ++S+R
Sbjct: 334 AAESMIMQRVSASSER 349
>ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata] gi|297318987|gb|EFH49409.1| hypothetical protein
ARALYDRAFT_487225 [Arabidopsis lyrata subsp. lyrata]
Length = 334
Score = 308 bits (788), Expect = 4e-81
Identities = 166/317 (52%), Positives = 226/317 (71%), Gaps = 19/317 (5%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
P S AD +K THIRFLVSN AAG VIGKGGS+I E Q + GA IQLSRN E+FP T+
Sbjct: 22 PHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTT 81
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNEV--KENNDDGSKSNVRLIVPHSSCGGLIGKGGS 374
DRI M+SG EV++GL+LIL+KL +E+ ++ N+ + +RL+VP+SSCGG+IGKGG+
Sbjct: 82 DRIIMISGSIKEVINGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGA 141
Query: 375 TIKSFIEDSQAVIKISP---RYVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
TIKSFIE+S+A IKISP + G DRL+T++G+ EEQ+RA LIL+KLTED HYS +
Sbjct: 142 TIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNV 201
Query: 546 HSLYPYAA-----------GFAMPSLP---YKAMLYGMNDNGGEHPINKGAISSPSGSFK 683
HS Y YA +A+PS+ Y ++ Y N +GG++ +K S+
Sbjct: 202 HSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGGKYQNHKDEAST------ 255
Query: 684 GSLLLSIADEFMGLVIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSI 863
++ + +ADE +GLV+GRGGRN+MEI+Q+TGARIKIS+RGDFMSGT++RKV+I+G ++I
Sbjct: 256 -TVTIGVADEHIGLVLGRGGRNIMEITQITGARIKISDRGDFMSGTTDRKVSITGPQRAI 314
Query: 864 HMAEAMIMLKIPSNSDR 914
AE MI K+ S ++R
Sbjct: 315 QQAETMIKQKVDSATER 331
>ref|XP_006398902.1| hypothetical protein EUTSA_v10014068mg [Eutrema salsugineum]
gi|557099992|gb|ESQ40355.1| hypothetical protein
EUTSA_v10014068mg [Eutrema salsugineum]
Length = 334
Score = 307 bits (786), Expect = 6e-81
Identities = 167/317 (52%), Positives = 224/317 (70%), Gaps = 19/317 (5%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
P S AD +K THIRFLVSN AAG VIGKGGS+I E Q + GA IQLSRN E+FP T+
Sbjct: 22 PHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTT 81
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNEV--KENNDDGSKSNVRLIVPHSSCGGLIGKGGS 374
DRI M+SG EV++GL+LIL+KL +E+ ++ ND + +RL+VP+SSCGG+IGKGG+
Sbjct: 82 DRIIMISGSIKEVVNGLELILDKLHSELHAEDGNDVEPRRRIRLVVPNSSCGGIIGKGGA 141
Query: 375 TIKSFIEDSQAVIKISP---RYVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
TIKSFIE+S+A IKISP Y G DRL+T++G+ EEQ+RA LIL+KLT D HYS +
Sbjct: 142 TIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTFEEQMRAIDLILAKLTSDDHYSQNV 201
Query: 546 HSLYPYAA-----------GFAMPSLP---YKAMLYGMNDNGGEHPINKGAISSPSGSFK 683
HS Y YA + +PS+ Y ++ Y N +GG++ +K S+
Sbjct: 202 HSPYSYAGLFYSGFHGHPYAYVLPSVATAGYNSVNYAPNGSGGKYQNHKEEAST------ 255
Query: 684 GSLLLSIADEFMGLVIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSI 863
+ + ++DE +GLV+GRGGRN+MEI+Q+TGARIKIS+RGDFMSGT++RKV+I+GS ++I
Sbjct: 256 -TKTIGVSDEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAI 314
Query: 864 HMAEAMIMLKIPSNSDR 914
AE MI K+ S S+R
Sbjct: 315 QQAETMIKQKVDSASER 331
>ref|NP_850764.1| TOMV RNA binding protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| TOMV RNA binding protein
[Arabidopsis thaliana]
Length = 334
Score = 306 bits (785), Expect = 8e-81
Identities = 166/317 (52%), Positives = 226/317 (71%), Gaps = 19/317 (5%)
Frame = +3
Query: 21 PPKSPPADGKDKQTHIRFLVSNTAAGRVIGKGGSSIIELQTQCGAHIQLSRNYEYFPTTS 200
P S AD +K THIRFLVSN AAG VIGKGGS+I E Q + GA IQLSRN E+FP T+
Sbjct: 22 PHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTT 81
Query: 201 DRIAMVSGGFNEVMDGLKLILEKLLNEV--KENNDDGSKSNVRLIVPHSSCGGLIGKGGS 374
DRI M+SG EV++GL+LIL+KL +E+ ++ N+ + +RL+VP+SSCGG+IGKGG+
Sbjct: 82 DRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGA 141
Query: 375 TIKSFIEDSQAVIKISP---RYVGFDDRLITVTGSLEEQLRAAFLILSKLTEDGHYSDSK 545
TIKSFIE+S+A IKISP + G DRL+T++G+ EEQ+RA LIL+KLTED HYS +
Sbjct: 142 TIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNV 201
Query: 546 HSLYPYAA-----------GFAMPSLP---YKAMLYGMNDNGGEHPINKGAISSPSGSFK 683
HS Y YA +A+PS+ Y ++ Y N +GG++ +K S+
Sbjct: 202 HSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGGKYQNHKEEAST------ 255
Query: 684 GSLLLSIADEFMGLVIGRGGRNLMEISQVTGARIKISERGDFMSGTSNRKVTISGSLKSI 863
++ + +ADE +GLV+GRGGRN+MEI+Q+TGARIKIS+RGDFMSGT++RKV+I+G ++I
Sbjct: 256 -TVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAI 314
Query: 864 HMAEAMIMLKIPSNSDR 914
AE MI K+ S ++R
Sbjct: 315 QQAETMIKQKVDSATER 331