BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00026653
         (893 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chl...   409   e-111
gb|EEC81320.1| hypothetical protein OsI_24484 [Oryza sativa Indi...   408   e-111
ref|NP_001058594.1| Os06g0717400 [Oryza sativa Japonica Group] g...   405   e-111
ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [S...   399   e-108
ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chl...   398   e-108
gb|ACG41877.1| RNA binding protein [Zea mays]                         397   e-108
gb|AFW75755.1| hypothetical protein ZEAMMB73_425131 [Zea mays]        395   e-108
ref|NP_001140404.1| RNA binding protein [Zea mays] gi|194699356|...   395   e-108
ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chlor...   386   e-105
ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citr...   385   e-104
ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citr...   385   e-104
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl...   385   e-104
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   383   e-104
ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Caps...   372   e-100
ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutr...   371   e-100
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...   371   e-100
gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [...   370   e-100
ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [A...   369   1e-99
ref|NP_974151.1| RNA pseudourine synthase 2 [Arabidopsis thalian...   367   4e-99
gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]           366   5e-99

>ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Oryza
           brachyantha]
          Length = 442

 Score =  409 bits (1050), Expect = e-111
 Identities = 206/280 (73%), Positives = 237/280 (84%), Gaps = 3/280 (1%)
 Frame = +2

Query: 62  RTGHAGLRLEERVLPGPEKSRLDAWISARIPG--VSRARVQSSIRSGLVTVNGRVVDKVS 235
           R GH G RLEE V  G  +SR+DAWIS+R+ G  VSRARVQ+SIR+GLV VNGR V KVS
Sbjct: 51  RGGHGGTRLEEAVPAGEGRSRIDAWISSRLGGGGVSRARVQASIRAGLVAVNGRPVSKVS 110

Query: 236 HMIKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLV 415
           HM+KGGD ++CTVS+LQPLRAEPEDIPLDIVYED H+LVVNKPAHMVVHPAPGNANGTLV
Sbjct: 111 HMVKGGDMVSCTVSELQPLRAEPEDIPLDIVYEDQHLLVVNKPAHMVVHPAPGNANGTLV 170

Query: 416 NAVLHHCRLPTMACRS-NSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVH 592
           NA+LHHC++ T  C + NS   EC +SSDD+ + FHVD+ +  E+SSE   ALVRPGIVH
Sbjct: 171 NAILHHCKISTFTCLARNSTDDECPDSSDDDIDVFHVDQFTTGEVSSEVREALVRPGIVH 230

Query: 593 RLDKGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNN 772
           RLDKGTSGLLVVAKDEHSHA LAEQFKLH+I RVY+SLT GAP+P+SGRIE+PIARD NN
Sbjct: 231 RLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVPIARDPNN 290

Query: 773 RIRMIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           RIRMIA  GS  +R+AR+AASRYKV E+ AGGGSALVEW+
Sbjct: 291 RIRMIATPGS-GHRYARHAASRYKVREVFAGGGSALVEWK 329


>gb|EEC81320.1| hypothetical protein OsI_24484 [Oryza sativa Indica Group]
          Length = 445

 Score =  408 bits (1048), Expect = e-111
 Identities = 206/280 (73%), Positives = 237/280 (84%), Gaps = 3/280 (1%)
 Frame = +2

Query: 62  RTGHAGLRLEERVLPGPEKSRLDAWISARIPG--VSRARVQSSIRSGLVTVNGRVVDKVS 235
           R GH G RLEE V  G  +SR+DAWISAR+ G  VSRAR+Q+SIR+GLV VNGR V KVS
Sbjct: 53  RGGHGGTRLEEAVPAGEGRSRIDAWISARLGGGGVSRARIQASIRAGLVVVNGRPVSKVS 112

Query: 236 HMIKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLV 415
           HM+KGGD ++CTVS+LQPLRAEPEDIPLDIVYEDDH+LVVNKPAHMVVHPAPGNANGTLV
Sbjct: 113 HMVKGGDIVSCTVSELQPLRAEPEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLV 172

Query: 416 NAVLHHCRLPTMACRS-NSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVH 592
           NA+LHHC++ T  C + NS   EC +SSDD+ + F +D+ +  E+SSE   ALVRPGIVH
Sbjct: 173 NAILHHCKISTFTCLARNSIDDECPDSSDDDIDVFDIDQFTTGEVSSEVREALVRPGIVH 232

Query: 593 RLDKGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNN 772
           RLDKGTSGLLVVAKDEHSHA LAEQFKLH+I RVY+SLT GAP+P+SGRIE+PIARD NN
Sbjct: 233 RLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVPIARDPNN 292

Query: 773 RIRMIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           RIRMIA  GS  +R+AR+AASRYKV E+ AGGGSALVEWR
Sbjct: 293 RIRMIATPGS-GHRYARHAASRYKVREVFAGGGSALVEWR 331


>ref|NP_001058594.1| Os06g0717400 [Oryza sativa Japonica Group]
           gi|75252835|sp|Q5Z8P2.1|PUS2_ORYSJ RecName: Full=RNA
           pseudouridine synthase 2, chloroplastic; AltName:
           Full=RNA pseudouridylate synthase 2; AltName:
           Full=RNA-uridine isomerase 2; Flags: Precursor
           gi|53791796|dbj|BAD53590.1| ribosomal large subunit
           pseudouridine synthase-like [Oryza sativa Japonica
           Group] gi|54291043|dbj|BAD61720.1| ribosomal large
           subunit pseudouridine synthase-like [Oryza sativa
           Japonica Group] gi|113596634|dbj|BAF20508.1|
           Os06g0717400 [Oryza sativa Japonica Group]
           gi|215706335|dbj|BAG93191.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222636236|gb|EEE66368.1| hypothetical protein
           OsJ_22675 [Oryza sativa Japonica Group]
          Length = 445

 Score =  405 bits (1042), Expect = e-111
 Identities = 205/280 (73%), Positives = 236/280 (84%), Gaps = 3/280 (1%)
 Frame = +2

Query: 62  RTGHAGLRLEERVLPGPEKSRLDAWISARIPG--VSRARVQSSIRSGLVTVNGRVVDKVS 235
           R GH G RLEE V  G  +SR+DAWISAR+ G  VSRAR+Q+SIR+GLV VNGR V KVS
Sbjct: 53  RGGHGGTRLEEAVPAGEGRSRIDAWISARLGGGGVSRARIQASIRAGLVVVNGRPVSKVS 112

Query: 236 HMIKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLV 415
           HM+KGGD ++CTV +LQPLRAEPEDIPLDIVYEDDH+LVVNKPAHMVVHPAPGNANGTLV
Sbjct: 113 HMVKGGDIVSCTVLELQPLRAEPEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLV 172

Query: 416 NAVLHHCRLPTMACRS-NSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVH 592
           NA+LHHC++ T  C + NS   EC +SSDD+ + F +D+ +  E+SSE   ALVRPGIVH
Sbjct: 173 NAILHHCKISTFTCLARNSIDDECPDSSDDDIDVFDIDQFTTGEVSSEVREALVRPGIVH 232

Query: 593 RLDKGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNN 772
           RLDKGTSGLLVVAKDEHSHA LAEQFKLH+I RVY+SLT GAP+P+SGRIE+PIARD NN
Sbjct: 233 RLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVPIARDPNN 292

Query: 773 RIRMIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           RIRMIA  GS  +R+AR+AASRYKV E+ AGGGSALVEWR
Sbjct: 293 RIRMIATPGS-GHRYARHAASRYKVREVFAGGGSALVEWR 331


>ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor]
           gi|241917257|gb|EER90401.1| hypothetical protein
           SORBIDRAFT_10g030300 [Sorghum bicolor]
          Length = 441

 Score =  399 bits (1024), Expect = e-108
 Identities = 202/278 (72%), Positives = 233/278 (83%), Gaps = 3/278 (1%)
 Frame = +2

Query: 68  GHAGLRLEERVLPGPEKSRLDAWISARIPG--VSRARVQSSIRSGLVTVNGRVVDKVSHM 241
           GH G+RLEE V  G  +SR+DAWISAR+ G  VSRARVQ+SIR+GLV VNGR V KVSH 
Sbjct: 56  GHGGMRLEEAVPVGEGRSRIDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHT 115

Query: 242 IKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNA 421
           +KGGD ++CTVS+LQPLRAE EDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNA
Sbjct: 116 VKGGDLVSCTVSELQPLRAEAEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNA 175

Query: 422 VLHHCRLPTMACRSNSEVA-ECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRL 598
           +LHHC++ T  C + S    EC +SSDD+ + F+VD+ + ++ SSE   ALVRPGIVHRL
Sbjct: 176 ILHHCKISTFTCLARSSTGDECLDSSDDDIDVFNVDQFATEDASSEVRNALVRPGIVHRL 235

Query: 599 DKGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRI 778
           DKGTSGLLVVAKDEHSHA LAEQFKLH+I RVY+SLT G P+P+SGRIE  IARD NNRI
Sbjct: 236 DKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGVPNPNSGRIEASIARDPNNRI 295

Query: 779 RMIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           RMIAI+GS  +R+AR+AASRYKV E+  GGGSALVEWR
Sbjct: 296 RMIAIAGS-GHRYARHAASRYKVREVFVGGGSALVEWR 332


>ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Setaria italica]
          Length = 437

 Score =  398 bits (1022), Expect = e-108
 Identities = 205/278 (73%), Positives = 232/278 (83%), Gaps = 3/278 (1%)
 Frame = +2

Query: 68  GHAGLRLEERVLPGPEKSRLDAWISARIPG--VSRARVQSSIRSGLVTVNGRVVDKVSHM 241
           G  G RLEE V  G  +SR+DAWISAR+ G  VSRARVQ+SIR+GLV VNGR V KVSHM
Sbjct: 51  GLTGTRLEEAVPAGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHM 110

Query: 242 IKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNA 421
           +KGGD ++CTVS+LQPLRAE EDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNA
Sbjct: 111 VKGGDLVSCTVSELQPLRAEAEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNA 170

Query: 422 VLHHCRLPTMACRS-NSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRL 598
           +LHHCR+ T  C + NS   EC +SSDD+ + F VD+ + +++SSE   ALVRPGIVHRL
Sbjct: 171 ILHHCRISTFTCLARNSTGDECPDSSDDDVDVFDVDQFTTEDVSSEVRNALVRPGIVHRL 230

Query: 599 DKGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRI 778
           DKGTSGLLVVAKDEHSHA LAEQFKLH+I RVY+SLT G P P+SGRIE  IARD NNRI
Sbjct: 231 DKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGVPHPNSGRIEASIARDPNNRI 290

Query: 779 RMIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           RMIAI+GS   R+AR+AASRYKV E+ AGGGSALVEWR
Sbjct: 291 RMIAIAGS-GQRYARHAASRYKVREVFAGGGSALVEWR 327


>gb|ACG41877.1| RNA binding protein [Zea mays]
          Length = 439

 Score =  397 bits (1019), Expect = e-108
 Identities = 202/278 (72%), Positives = 232/278 (83%), Gaps = 3/278 (1%)
 Frame = +2

Query: 68  GHAGLRLEERVLPGPEKSRLDAWISARIPG--VSRARVQSSIRSGLVTVNGRVVDKVSHM 241
           GH G RLEE V  G  +SR+DAWISAR+ G  VSRARVQ+SIR+GLV VNGR V KVSH 
Sbjct: 53  GHGGTRLEEAVPVGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHT 112

Query: 242 IKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNA 421
           +KGGD ++CTVS+LQPLRAE EDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNA GTLVNA
Sbjct: 113 VKGGDLVSCTVSELQPLRAEAEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNAKGTLVNA 172

Query: 422 VLHHCRLPTMACRSNSEVA-ECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRL 598
           +LHHC++ T  C + S    EC +SSD++ + FHVD+ + +++SSE   ALVRPGIVHRL
Sbjct: 173 ILHHCKISTFTCLARSSAGDECPDSSDEDTDVFHVDQFAAEDVSSEVRNALVRPGIVHRL 232

Query: 599 DKGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRI 778
           DKGTSGLLVVAKDEHSHA LAEQFKLH+I RVY+SLT GAP+P+SGRIE  IARD NNRI
Sbjct: 233 DKGTSGLLVVAKDEHSHARLAEQFKLHTIRRVYISLTCGAPNPNSGRIEASIARDPNNRI 292

Query: 779 RMIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           RM AI+GS  +R+AR AASRYKV E+ AGGGSALVEWR
Sbjct: 293 RMTAIAGS-GHRYARNAASRYKVREVFAGGGSALVEWR 329


>gb|AFW75755.1| hypothetical protein ZEAMMB73_425131 [Zea mays]
          Length = 350

 Score =  395 bits (1016), Expect = e-108
 Identities = 201/278 (72%), Positives = 232/278 (83%), Gaps = 3/278 (1%)
 Frame = +2

Query: 68  GHAGLRLEERVLPGPEKSRLDAWISARIPG--VSRARVQSSIRSGLVTVNGRVVDKVSHM 241
           GH G RLEE V  G  +SR+DAWISAR+ G  VSRARVQ+SIR+GLV VNGR V KVSH 
Sbjct: 53  GHGGTRLEEAVPVGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHT 112

Query: 242 IKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNA 421
           +KGGD ++CTVS+LQPLRAE EDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNA GTLVNA
Sbjct: 113 VKGGDLVSCTVSELQPLRAEAEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNAKGTLVNA 172

Query: 422 VLHHCRLPTMACRSNSEVA-ECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRL 598
           +LHHC++ T  C + S    EC +S+D++ + FHVD+ + +++SSE   ALVRPGIVHRL
Sbjct: 173 ILHHCKISTFTCLARSSAGDECPDSTDEDTDVFHVDQFAAEDVSSEVRNALVRPGIVHRL 232

Query: 599 DKGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRI 778
           DKGTSGLLVVAKDEHSHA LAEQFKLH+I RVY+SLT GAP+P+SGRIE  IARD NNRI
Sbjct: 233 DKGTSGLLVVAKDEHSHARLAEQFKLHTIRRVYISLTCGAPNPNSGRIEASIARDPNNRI 292

Query: 779 RMIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           RM AI+GS  +R+AR AASRYKV E+ AGGGSALVEWR
Sbjct: 293 RMTAIAGS-GHRYARNAASRYKVREVFAGGGSALVEWR 329


>ref|NP_001140404.1| RNA binding protein [Zea mays] gi|194699356|gb|ACF83762.1| unknown
           [Zea mays] gi|413943105|gb|AFW75754.1| RNA binding
           protein [Zea mays]
          Length = 419

 Score =  395 bits (1016), Expect = e-108
 Identities = 201/278 (72%), Positives = 232/278 (83%), Gaps = 3/278 (1%)
 Frame = +2

Query: 68  GHAGLRLEERVLPGPEKSRLDAWISARIPG--VSRARVQSSIRSGLVTVNGRVVDKVSHM 241
           GH G RLEE V  G  +SR+DAWISAR+ G  VSRARVQ+SIR+GLV VNGR V KVSH 
Sbjct: 53  GHGGTRLEEAVPVGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHT 112

Query: 242 IKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNA 421
           +KGGD ++CTVS+LQPLRAE EDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNA GTLVNA
Sbjct: 113 VKGGDLVSCTVSELQPLRAEAEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNAKGTLVNA 172

Query: 422 VLHHCRLPTMACRSNSEVA-ECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRL 598
           +LHHC++ T  C + S    EC +S+D++ + FHVD+ + +++SSE   ALVRPGIVHRL
Sbjct: 173 ILHHCKISTFTCLARSSAGDECPDSTDEDTDVFHVDQFAAEDVSSEVRNALVRPGIVHRL 232

Query: 599 DKGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRI 778
           DKGTSGLLVVAKDEHSHA LAEQFKLH+I RVY+SLT GAP+P+SGRIE  IARD NNRI
Sbjct: 233 DKGTSGLLVVAKDEHSHARLAEQFKLHTIRRVYISLTCGAPNPNSGRIEASIARDPNNRI 292

Query: 779 RMIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           RM AI+GS  +R+AR AASRYKV E+ AGGGSALVEWR
Sbjct: 293 RMTAIAGS-GHRYARNAASRYKVREVFAGGGSALVEWR 329


>ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like
           [Brachypodium distachyon]
          Length = 439

 Score =  386 bits (992), Expect = e-105
 Identities = 198/280 (70%), Positives = 232/280 (82%), Gaps = 3/280 (1%)
 Frame = +2

Query: 62  RTGHAGLRLEERVLPGPEKSRLDAWISARIPG--VSRARVQSSIRSGLVTVNGRVVDKVS 235
           R GHAG RLEE V  G  +SR+DAWISAR+ G  VSRARVQ+SIR+GLV VNGR V KVS
Sbjct: 49  RGGHAGTRLEEAVPAGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVS 108

Query: 236 HMIKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLV 415
             +KGGD+++CTVS+LQPLRAE EDIPLDIVYED+H+LVVNKPAHMVVHPAPGNANGTLV
Sbjct: 109 QTVKGGDTVSCTVSELQPLRAEAEDIPLDIVYEDEHLLVVNKPAHMVVHPAPGNANGTLV 168

Query: 416 NAVLHHCRLPTMACRS-NSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVH 592
           NA+LHHC++ T  C + NS   EC ESSDD+ + F VD+ +  E+SSE   A+VRPGIVH
Sbjct: 169 NAILHHCKISTFTCLARNSIDDECPESSDDDIDVFDVDQFN-GEVSSEVRDAIVRPGIVH 227

Query: 593 RLDKGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNN 772
           RLDKGTSGLLVVAKDEHSHA LAEQFKLH+I R+Y+SLT G P+P+S RIE+PI+RD NN
Sbjct: 228 RLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRIYISLTCGVPNPNSARIEVPISRDPNN 287

Query: 773 RIRMIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           RIRMIA  GS  +R+AR+AASRYKV E+   GGSALVEW+
Sbjct: 288 RIRMIAAPGS-GHRYARHAASRYKVREVFCSGGSALVEWK 326


>ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537377|gb|ESR48495.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 341

 Score =  385 bits (989), Expect = e-104
 Identities = 195/274 (71%), Positives = 222/274 (81%)
 Frame = +2

Query: 71  HAGLRLEERVLPGPEKSRLDAWISARIPGVSRARVQSSIRSGLVTVNGRVVDKVSHMIKG 250
           +AG++LEE V     K RLDAWIS+RI G+SRARVQSSIRSGLV+VNG+VV KVSH +KG
Sbjct: 55  YAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSVNGQVVSKVSHNVKG 114

Query: 251 GDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNAVLH 430
           GD + CT+S+LQPLRAE EDIPLDIVYEDD+VLVVNKPAHMVVHPAPGNA GTLVN +LH
Sbjct: 115 GDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGILH 174

Query: 431 HCRLPTMACRSNSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRLDKGT 610
           HC LPT+A  +    ++  + SDDE            E SS  S A +RPGIVHRLDKGT
Sbjct: 175 HCSLPTLASSNQEAFSDAEDISDDE------------EFSSSISGASIRPGIVHRLDKGT 222

Query: 611 SGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRIRMIA 790
           SGLLVVAKDEHSHAHL+EQFKLH+I RVY+SLT G PS SSGRIE+PI+RD NNRIRM A
Sbjct: 223 SGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAA 282

Query: 791 ISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           I GSN +  AR+AASRYKV+EILAGGGSALVEWR
Sbjct: 283 IPGSNKHGQARHAASRYKVIEILAGGGSALVEWR 316


>ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537376|gb|ESR48494.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 324

 Score =  385 bits (989), Expect = e-104
 Identities = 195/274 (71%), Positives = 222/274 (81%)
 Frame = +2

Query: 71  HAGLRLEERVLPGPEKSRLDAWISARIPGVSRARVQSSIRSGLVTVNGRVVDKVSHMIKG 250
           +AG++LEE V     K RLDAWIS+RI G+SRARVQSSIRSGLV+VNG+VV KVSH +KG
Sbjct: 55  YAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSVNGQVVSKVSHNVKG 114

Query: 251 GDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNAVLH 430
           GD + CT+S+LQPLRAE EDIPLDIVYEDD+VLVVNKPAHMVVHPAPGNA GTLVN +LH
Sbjct: 115 GDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGILH 174

Query: 431 HCRLPTMACRSNSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRLDKGT 610
           HC LPT+A  +    ++  + SDDE            E SS  S A +RPGIVHRLDKGT
Sbjct: 175 HCSLPTLASSNQEAFSDAEDISDDE------------EFSSSISGASIRPGIVHRLDKGT 222

Query: 611 SGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRIRMIA 790
           SGLLVVAKDEHSHAHL+EQFKLH+I RVY+SLT G PS SSGRIE+PI+RD NNRIRM A
Sbjct: 223 SGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAA 282

Query: 791 ISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           I GSN +  AR+AASRYKV+EILAGGGSALVEWR
Sbjct: 283 IPGSNKHGQARHAASRYKVIEILAGGGSALVEWR 316


>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
           sinensis]
          Length = 421

 Score =  385 bits (988), Expect = e-104
 Identities = 194/274 (70%), Positives = 222/274 (81%)
 Frame = +2

Query: 71  HAGLRLEERVLPGPEKSRLDAWISARIPGVSRARVQSSIRSGLVTVNGRVVDKVSHMIKG 250
           +AG++LEE V     K RLDAWIS+RI G+SRARVQSSIRSGLV++NG+VV KVSH +KG
Sbjct: 55  YAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSINGQVVSKVSHNVKG 114

Query: 251 GDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNAVLH 430
           GD + CT+S+LQPLRAE EDIPLDIVYEDD+VLVVNKPAHMVVHPAPGNA GTLVN +LH
Sbjct: 115 GDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGILH 174

Query: 431 HCRLPTMACRSNSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRLDKGT 610
           HC LPT+A  +    ++  + SDDE            E SS  S A +RPGIVHRLDKGT
Sbjct: 175 HCSLPTLASSNQEAFSDAEDISDDE------------EFSSSISGASIRPGIVHRLDKGT 222

Query: 611 SGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRIRMIA 790
           SGLLVVAKDEHSHAHL+EQFKLH+I RVY+SLT G PS SSGRIE+PI+RD NNRIRM A
Sbjct: 223 SGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAA 282

Query: 791 ISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           I GSN +  AR+AASRYKV+EILAGGGSALVEWR
Sbjct: 283 IPGSNKHGQARHAASRYKVIEILAGGGSALVEWR 316


>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  383 bits (983), Expect = e-104
 Identities = 193/280 (68%), Positives = 226/280 (80%), Gaps = 3/280 (1%)
 Frame = +2

Query: 62  RTGHAGLRLEERVLP---GPEKSRLDAWISARIPGVSRARVQSSIRSGLVTVNGRVVDKV 232
           RT +AG+RLEE V+       K RLD+WIS+RI G+SRARVQSSIRSGLV+VN R+VDKV
Sbjct: 55  RTNYAGVRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKV 114

Query: 233 SHMIKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTL 412
           SH+I+ GD + CT+S+LQPLRAEPEDIPLDIVYED+HVLVVNKPAHMVVHPAPGNA+GTL
Sbjct: 115 SHVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGTL 174

Query: 413 VNAVLHHCRLPTMACRSNSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVH 592
           VN +LHHC LPT+A  +    +E  + SDDEFN F   +      +       +RPGIVH
Sbjct: 175 VNGILHHCSLPTVALPNRD--SEEDDISDDEFNSFAAGQ------NCGTCETNIRPGIVH 226

Query: 593 RLDKGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNN 772
           RLDKGTSGLLVVAKDEHSHAHL+EQFKLHSIHRVY+SLT G P+P SGR+EIP+ RD NN
Sbjct: 227 RLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNN 286

Query: 773 RIRMIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           RIRM A+ G +N+  AR+AASRYKV+EILA GGSALVEWR
Sbjct: 287 RIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWR 326


>ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Capsella rubella]
           gi|482570987|gb|EOA35175.1| hypothetical protein
           CARUB_v10020321mg [Capsella rubella]
          Length = 432

 Score =  372 bits (954), Expect = e-100
 Identities = 194/277 (70%), Positives = 219/277 (79%)
 Frame = +2

Query: 62  RTGHAGLRLEERVLPGPEKSRLDAWISARIPGVSRARVQSSIRSGLVTVNGRVVDKVSHM 241
           R  +AGLR+EE V     K RLD+WIS+RI GVSRARVQSSIR GLVTVNGRVVDKVSH 
Sbjct: 63  RVNNAGLRIEETVDDLKGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHN 122

Query: 242 IKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNA 421
           +K GD + CT+S+LQPL+AE EDIPLDIVYED HVLVVNKPAHMVVHPAPGN  GTLVN 
Sbjct: 123 VKAGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNG 182

Query: 422 VLHHCRLPTMACRSNSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRLD 601
           +LHHC LP++A  S     E  +S D+ F++        +  SS + AA VRPGIVHRLD
Sbjct: 183 ILHHCSLPSVAYSS----PEDDDSDDESFSD------GEEMTSSSSYAASVRPGIVHRLD 232

Query: 602 KGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRIR 781
           KGT+GLLVVAKDEHSHAHLAEQFKLH+I RVYVSLT G PSP  GRIEIPI RDS+NRIR
Sbjct: 233 KGTTGLLVVAKDEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIR 292

Query: 782 MIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           M AI G  ++  AR+AASRYKV+E LAGGGSALVEWR
Sbjct: 293 MAAIPGGLSSGRARHAASRYKVIETLAGGGSALVEWR 329


>ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutrema salsugineum]
           gi|557086678|gb|ESQ27530.1| hypothetical protein
           EUTSA_v10018588mg [Eutrema salsugineum]
          Length = 432

 Score =  371 bits (952), Expect = e-100
 Identities = 191/278 (68%), Positives = 219/278 (78%), Gaps = 1/278 (0%)
 Frame = +2

Query: 62  RTGHAGLRLEERVLPGPE-KSRLDAWISARIPGVSRARVQSSIRSGLVTVNGRVVDKVSH 238
           R  +AGL+LEE V    + K RLD+WIS+R+ GVSRARVQSSIR GLV+VNGRVVDKVSH
Sbjct: 63  RVNNAGLKLEETVEAAVKAKIRLDSWISSRVHGVSRARVQSSIRLGLVSVNGRVVDKVSH 122

Query: 239 MIKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVN 418
            +K GD + CT+S+LQPL+AEPEDIPLDIVYED H+LVVNKPAHMVVHPAPGN  GTLVN
Sbjct: 123 NVKAGDEVNCTISELQPLKAEPEDIPLDIVYEDKHLLVVNKPAHMVVHPAPGNPTGTLVN 182

Query: 419 AVLHHCRLPTMACRSNSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRL 598
            +LHHC LP +A  +  + ++    SDDE           +  SS + AA VRPGIVHRL
Sbjct: 183 GILHHCSLPCVAYSNPEDDSDEETLSDDE-----------EMTSSSSLAASVRPGIVHRL 231

Query: 599 DKGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRI 778
           DKGTSGLLVVAKDEHSHAHLAEQFKLH+I RVY+SLT G PSPS GR++IPI RD NNRI
Sbjct: 232 DKGTSGLLVVAKDEHSHAHLAEQFKLHTIERVYISLTSGVPSPSQGRVDIPIGRDPNNRI 291

Query: 779 RMIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           RM AI GS +   AR+AASRYKV+E LAGGGSALVEWR
Sbjct: 292 RMAAIPGSLSRGKARHAASRYKVIETLAGGGSALVEWR 329


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score =  371 bits (952), Expect = e-100
 Identities = 192/274 (70%), Positives = 216/274 (78%)
 Frame = +2

Query: 71  HAGLRLEERVLPGPEKSRLDAWISARIPGVSRARVQSSIRSGLVTVNGRVVDKVSHMIKG 250
           +AG RLEE V   P K RLD+WIS RI G+SRARVQSSIR+GLV+VNGRV+DKVSH +K 
Sbjct: 61  YAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKA 120

Query: 251 GDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNAVLH 430
           GD I CT+S+LQPLRAEPEDI LDIVYED+HVLVVNKPAHMVVHPAPGNA GTLVNA+L+
Sbjct: 121 GDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILN 180

Query: 431 HCRLPTMACRSNSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRLDKGT 610
           HC LP M   S  E    S+ SDDEF+   V         S  S A +RPGIVHRLDKGT
Sbjct: 181 HCSLP-MVATSTGENESDSDVSDDEFSSIGV--------FSRVSEAPIRPGIVHRLDKGT 231

Query: 611 SGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRIRMIA 790
           SGLLVVAKDEHSHAHL+ QFK HSI RVY+SLT G P  ++GRIE+PI RD NNRIRM A
Sbjct: 232 SGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTA 291

Query: 791 ISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           I G+ NN HA+YAASRY V+EILA GGS+LVEWR
Sbjct: 292 IDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWR 325


>gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 433

 Score =  370 bits (950), Expect = e-100
 Identities = 184/278 (66%), Positives = 223/278 (80%), Gaps = 1/278 (0%)
 Frame = +2

Query: 62  RTGHAGLRLEERVLPGPE-KSRLDAWISARIPGVSRARVQSSIRSGLVTVNGRVVDKVSH 238
           RT + G++LEE V    + K RLD+WIS+RI G+SRARVQSSI+SGLVTVNGRVVDKVSH
Sbjct: 60  RTSYTGVQLEETVDGTKQGKLRLDSWISSRIQGISRARVQSSIKSGLVTVNGRVVDKVSH 119

Query: 239 MIKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVN 418
            ++ GD + C +S+LQPLRAEPEDIPLDIVYEDDHVLVVNKP HMVVHPAPGNA GTLVN
Sbjct: 120 GLRHGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAPGNATGTLVN 179

Query: 419 AVLHHCRLPTMACRSNSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRL 598
            +LHHC LPT+A      +++  + SDD+    +            ++AA VRPGIVHRL
Sbjct: 180 GILHHCSLPTVALSEKEVLSDTEDVSDDDEGFCY----------GASAAASVRPGIVHRL 229

Query: 599 DKGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRI 778
           DKGTSGLLVVAKDEHSH+HL+EQFK H+I RVY+SLT G PSPS+GR++I I RDSNNR+
Sbjct: 230 DKGTSGLLVVAKDEHSHSHLSEQFKQHTIQRVYISLTCGVPSPSAGRVDISIGRDSNNRV 289

Query: 779 RMIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           RMIA+ G N++  AR+AASRYKV+E+LAGGGSAL++WR
Sbjct: 290 RMIAVPGLNHHGRARHAASRYKVIEVLAGGGSALIQWR 327


>ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda]
           gi|548833830|gb|ERM96267.1| hypothetical protein
           AMTR_s00001p00157430 [Amborella trichopoda]
          Length = 452

 Score =  369 bits (946), Expect = 1e-99
 Identities = 183/275 (66%), Positives = 212/275 (77%)
 Frame = +2

Query: 68  GHAGLRLEERVLPGPEKSRLDAWISARIPGVSRARVQSSIRSGLVTVNGRVVDKVSHMIK 247
           G+ GL+ E  V  G +K R+D+W+SARI  VSRAR+QSSIR G V VNG  + KVSH++K
Sbjct: 66  GYGGLQFESSVAVGSKKERIDSWLSARIGDVSRARIQSSIRQGFVKVNGLPITKVSHIVK 125

Query: 248 GGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNAVL 427
            GD + CTVS LQPL+AEPED+PLDI+YEDDHVLVVNKPAHMVVHPAPGNANGTLVN +L
Sbjct: 126 VGDMVDCTVSHLQPLKAEPEDMPLDIIYEDDHVLVVNKPAHMVVHPAPGNANGTLVNGIL 185

Query: 428 HHCRLPTMACRSNSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRLDKG 607
           HHC LP          +E  +  D+    F+ D +S Q  SS      +RPGIVHRLDKG
Sbjct: 186 HHCTLPAFGLPDGELTSESDDECDNGLTMFNPDPISTQCRSS------IRPGIVHRLDKG 239

Query: 608 TSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRIRMI 787
           TSGLLVVAK+EHSHAHL+EQFKLH+IHR Y+SLT G PSPS+G IEIPIARD NNRIRM 
Sbjct: 240 TSGLLVVAKNEHSHAHLSEQFKLHTIHRQYISLTCGVPSPSNGCIEIPIARDMNNRIRMA 299

Query: 788 AISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           A+SG NN R AR A SRY V+E+LAGGGSALVEWR
Sbjct: 300 AVSGQNNTRKARLATSRYHVMEVLAGGGSALVEWR 334


>ref|NP_974151.1| RNA pseudourine synthase 2 [Arabidopsis thaliana]
           gi|122215273|sp|Q3ECD0.1|PUS2_ARATH RecName: Full=RNA
           pseudouridine synthase 2, chloroplastic; AltName:
           Full=RNA pseudouridylate synthase 2; AltName:
           Full=RNA-uridine isomerase 2; Flags: Precursor
           gi|332197669|gb|AEE35790.1| RNA pseudourine synthase 2
           [Arabidopsis thaliana]
          Length = 430

 Score =  367 bits (941), Expect = 4e-99
 Identities = 195/277 (70%), Positives = 213/277 (76%)
 Frame = +2

Query: 62  RTGHAGLRLEERVLPGPEKSRLDAWISARIPGVSRARVQSSIRSGLVTVNGRVVDKVSHM 241
           R  +AGLR+EE V     K RLD+WIS+RI GVSRARVQSSIR GLVTVNGRVVDKVSH 
Sbjct: 63  RVNNAGLRIEEIVDAAKGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHN 122

Query: 242 IKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNA 421
           +K GD + CT+S+LQPL+AE EDIPLDIVYED HVLVVNKPAHMVVHPAPGN  GTLVN 
Sbjct: 123 VKSGDEVNCTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNG 182

Query: 422 VLHHCRLPTMACRSNSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRLD 601
           +LHHC LP +   SNSE     E  D +   F  DE      S  + AA VRPGIVHRLD
Sbjct: 183 ILHHCSLPCVD-YSNSE-----EDDDSDEETFSDDE--EMTTSPSSYAASVRPGIVHRLD 234

Query: 602 KGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRIR 781
           KGT+GLLVVAKDEHSHAHLAEQFKLH+I RVYVSLT G PSP  GRIEIPI RDS+NRIR
Sbjct: 235 KGTTGLLVVAKDEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIR 294

Query: 782 MIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           M AI G      AR+AASRYKV+E  AGGGSALVEWR
Sbjct: 295 MAAIPGGVRGGRARHAASRYKVIETFAGGGSALVEWR 331


>gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]
          Length = 369

 Score =  366 bits (940), Expect = 5e-99
 Identities = 186/277 (67%), Positives = 215/277 (77%)
 Frame = +2

Query: 62  RTGHAGLRLEERVLPGPEKSRLDAWISARIPGVSRARVQSSIRSGLVTVNGRVVDKVSHM 241
           R   AG+RLE  V     K RLD+WIS+R+ G+SRARVQSSIR GLV VNG+VVDKVS  
Sbjct: 72  RPNFAGVRLEATVAVDSGKVRLDSWISSRVSGISRARVQSSIRLGLVRVNGQVVDKVSQN 131

Query: 242 IKGGDSITCTVSQLQPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNA 421
           +K GD I CT+S+LQPL+AE EDIPL+IV+EDD VLVVNKP HMVVHPAPGNA GTLVN 
Sbjct: 132 VKTGDKIDCTISELQPLKAEAEDIPLEIVHEDDSVLVVNKPPHMVVHPAPGNAKGTLVNG 191

Query: 422 VLHHCRLPTMACRSNSEVAECSESSDDEFNEFHVDELSIQEISSENSAALVRPGIVHRLD 601
           +LHHC LPT+A      +++  ++ DDEF    +D        +  S A VRPGIVHRLD
Sbjct: 192 ILHHCSLPTIAFSHQESLSDDEDTCDDEFRGMSMD--------ASISGASVRPGIVHRLD 243

Query: 602 KGTSGLLVVAKDEHSHAHLAEQFKLHSIHRVYVSLTHGAPSPSSGRIEIPIARDSNNRIR 781
           KGTSGLLVVAKDEHSHAHL+EQFKLH+IHRVYVSLT G PS  SG IE+PI RD NNRIR
Sbjct: 244 KGTSGLLVVAKDEHSHAHLSEQFKLHTIHRVYVSLTSGVPSQLSGHIEVPIGRDPNNRIR 303

Query: 782 MIAISGSNNNRHARYAASRYKVVEILAGGGSALVEWR 892
           M AI G+ N++ AR+AASRYKV+EILA GGSALVEWR
Sbjct: 304 MAAIPGATNSKRARHAASRYKVIEILAAGGSALVEWR 340