BLASTX nr result

ID: Stemona21_contig00026054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00026054
         (270 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004308191.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    87   2e-15
gb|EMJ20675.1| hypothetical protein PRUPE_ppa021440mg, partial [...    85   1e-14
ref|XP_002525572.1| pentatricopeptide repeat-containing protein,...    85   1e-14
ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
gb|AAS99720.1| At2g19280 [Arabidopsis thaliana] gi|62319953|dbj|...    77   3e-12
ref|NP_179518.1| pentatricopeptide repeat-containing protein [Ar...    77   3e-12
ref|XP_002886049.1| pentatricopeptide repeat-containing protein ...    75   7e-12
gb|EOY19444.1| Pentatricopeptide repeat-containing protein, puta...    73   5e-11
gb|EOY19442.1| Pentatricopeptide repeat-containing protein, puta...    73   5e-11
ref|XP_006300135.1| hypothetical protein CARUB_v10016364mg [Caps...    71   1e-10
gb|EXB44293.1| hypothetical protein L484_012212 [Morus notabilis]      71   2e-10
ref|XP_006845595.1| hypothetical protein AMTR_s00019p00203030 [A...    58   1e-06
gb|EMT32075.1| hypothetical protein F775_20905 [Aegilops tauschii]     56   4e-06

>ref|XP_004308191.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g19280-like [Fragaria vesca subsp. vesca]
          Length = 599

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 42/84 (50%), Positives = 58/84 (69%)
 Frame = +3

Query: 18  MPSRLLSSKKVIVSLFIKEFCAHGEFGYACKLLLDMKSYGGEVDVVAFTIVIGALCKRGF 197
           M +R L     I+SLFI +FC  G+ G   KLL+DMK YG + DVV + IVI +LC+  +
Sbjct: 179 MQTRGLGLNSTIISLFIHKFCREGDLGSGFKLLVDMKKYGIQPDVVXYAIVIDSLCRMSY 238

Query: 198 LKVATSLLYKMIQIGVTPDRVSLS 269
           LK AT+LL+KM Q+G++PD V +S
Sbjct: 239 LKEATTLLFKMTQLGISPDSVLIS 262


>gb|EMJ20675.1| hypothetical protein PRUPE_ppa021440mg, partial [Prunus persica]
          Length = 675

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/84 (48%), Positives = 60/84 (71%)
 Frame = +3

Query: 18  MPSRLLSSKKVIVSLFIKEFCAHGEFGYACKLLLDMKSYGGEVDVVAFTIVIGALCKRGF 197
           M +R +     ++SLFI ++C+ G+     KLLL+MK+YG + DVV+FTIVI +LCK  +
Sbjct: 271 MRTRGMGLNAAMMSLFINKYCSEGDLESGWKLLLEMKNYGIQPDVVSFTIVINSLCKMSY 330

Query: 198 LKVATSLLYKMIQIGVTPDRVSLS 269
           L  AT+LL+KM Q+G++PD V LS
Sbjct: 331 LNEATALLFKMTQLGISPDPVLLS 354


>ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535151|gb|EEF36831.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 687

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 43/89 (48%), Positives = 61/89 (68%)
 Frame = +3

Query: 3   EVFVGMPSRLLSSKKVIVSLFIKEFCAHGEFGYACKLLLDMKSYGGEVDVVAFTIVIGAL 182
           ++  GM S  +     I+SLFI+ +CA G      K+L++MK+YG + DV+A+TIVI AL
Sbjct: 240 DILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDAL 299

Query: 183 CKRGFLKVATSLLYKMIQIGVTPDRVSLS 269
           CK   +KVATSLL+KMI  G++ D VS+S
Sbjct: 300 CKISCVKVATSLLFKMIHCGISVDSVSVS 328


>ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 42/84 (50%), Positives = 55/84 (65%)
 Frame = +3

Query: 18  MPSRLLSSKKVIVSLFIKEFCAHGEFGYACKLLLDMKSYGGEVDVVAFTIVIGALCKRGF 197
           M S+ L     I+SLFI  +C+ G      KLL++MK  G + DVVA+TIVI +LCK   
Sbjct: 212 MKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSL 271

Query: 198 LKVATSLLYKMIQIGVTPDRVSLS 269
           LK ATS+L+KM Q+GV  D VS+S
Sbjct: 272 LKEATSILFKMTQMGVFLDSVSVS 295


>gb|AAS99720.1| At2g19280 [Arabidopsis thaliana] gi|62319953|dbj|BAD94048.1|
           putative salt-inducible protein [Arabidopsis thaliana]
           gi|110738808|dbj|BAF01327.1| putative salt-inducible
           protein [Arabidopsis thaliana]
          Length = 693

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/84 (46%), Positives = 55/84 (65%)
 Frame = +3

Query: 18  MPSRLLSSKKVIVSLFIKEFCAHGEFGYACKLLLDMKSYGGEVDVVAFTIVIGALCKRGF 197
           M SR       ++SLFI+++C+ G F    +LL+ MK YG   D+VAFT+ I  LCK GF
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321

Query: 198 LKVATSLLYKMIQIGVTPDRVSLS 269
           LK ATS+L+K+   G++ D VS+S
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVS 345


>ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|334184304|ref|NP_001189552.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g19280 gi|3135258|gb|AAC16458.1| putative
           salt-inducible protein [Arabidopsis thaliana]
           gi|330251769|gb|AEC06863.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|330251770|gb|AEC06864.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 693

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/84 (46%), Positives = 55/84 (65%)
 Frame = +3

Query: 18  MPSRLLSSKKVIVSLFIKEFCAHGEFGYACKLLLDMKSYGGEVDVVAFTIVIGALCKRGF 197
           M SR       ++SLFI+++C+ G F    +LL+ MK YG   D+VAFT+ I  LCK GF
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321

Query: 198 LKVATSLLYKMIQIGVTPDRVSLS 269
           LK ATS+L+K+   G++ D VS+S
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVS 345


>ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331889|gb|EFH62308.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 755

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 38/84 (45%), Positives = 55/84 (65%)
 Frame = +3

Query: 18  MPSRLLSSKKVIVSLFIKEFCAHGEFGYACKLLLDMKSYGGEVDVVAFTIVIGALCKRGF 197
           M SR       ++SLFI+++C+ G F    +LL+ MK YG   D+VAFT+ I  LCK GF
Sbjct: 329 MLSRGRHLNAALLSLFIRKYCSDGYFDKGWELLMGMKDYGIRPDIVAFTVFIDKLCKAGF 388

Query: 198 LKVATSLLYKMIQIGVTPDRVSLS 269
           L+ ATS+L+K+   G++ D VS+S
Sbjct: 389 LREATSVLFKLKLFGISQDSVSVS 412


>gb|EOY19444.1| Pentatricopeptide repeat-containing protein, putative isoform 3
           [Theobroma cacao]
          Length = 533

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 36/73 (49%), Positives = 53/73 (72%)
 Frame = +3

Query: 51  IVSLFIKEFCAHGEFGYACKLLLDMKSYGGEVDVVAFTIVIGALCKRGFLKVATSLLYKM 230
           IVSLFI ++C  G+   A   L++MK+YG + DVVA+TI+I +LCK   L  ATSLL+K+
Sbjct: 113 IVSLFIDKYCRKGQLLSAWTFLMEMKNYGIKPDVVAYTIIIDSLCKVSCLGEATSLLFKI 172

Query: 231 IQIGVTPDRVSLS 269
            ++G++PD V +S
Sbjct: 173 TRLGISPDSVLVS 185


>gb|EOY19442.1| Pentatricopeptide repeat-containing protein, putative isoform 1
           [Theobroma cacao] gi|508727546|gb|EOY19443.1|
           Pentatricopeptide repeat-containing protein, putative
           isoform 1 [Theobroma cacao]
          Length = 661

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 36/73 (49%), Positives = 53/73 (72%)
 Frame = +3

Query: 51  IVSLFIKEFCAHGEFGYACKLLLDMKSYGGEVDVVAFTIVIGALCKRGFLKVATSLLYKM 230
           IVSLFI ++C  G+   A   L++MK+YG + DVVA+TI+I +LCK   L  ATSLL+K+
Sbjct: 241 IVSLFIDKYCRKGQLLSAWTFLMEMKNYGIKPDVVAYTIIIDSLCKVSCLGEATSLLFKI 300

Query: 231 IQIGVTPDRVSLS 269
            ++G++PD V +S
Sbjct: 301 TRLGISPDSVLVS 313


>ref|XP_006300135.1| hypothetical protein CARUB_v10016364mg [Capsella rubella]
           gi|482568844|gb|EOA33033.1| hypothetical protein
           CARUB_v10016364mg [Capsella rubella]
          Length = 696

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 32/73 (43%), Positives = 50/73 (68%)
 Frame = +3

Query: 51  IVSLFIKEFCAHGEFGYACKLLLDMKSYGGEVDVVAFTIVIGALCKRGFLKVATSLLYKM 230
           ++SLF+ ++C+ G F    +LL+ M  YG   D+VAFT++   LCK GFLK AT++L+K+
Sbjct: 281 VLSLFVSKYCSDGYFDKGWELLMGMNYYGIRPDIVAFTVLANKLCKAGFLKEATAILFKL 340

Query: 231 IQIGVTPDRVSLS 269
              G++ D VS+S
Sbjct: 341 KHFGISLDSVSVS 353


>gb|EXB44293.1| hypothetical protein L484_012212 [Morus notabilis]
          Length = 710

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 36/82 (43%), Positives = 51/82 (62%)
 Frame = +3

Query: 24  SRLLSSKKVIVSLFIKEFCAHGEFGYACKLLLDMKSYGGEVDVVAFTIVIGALCKRGFLK 203
           SR +      +SLFI  +C  G F    KLL  M+ YG + DV+++TI+I ALCK     
Sbjct: 281 SRGMGLNASTISLFIHYYCKEGNFESGWKLLCRMRDYGVKPDVISYTIIIDALCKMSCPI 340

Query: 204 VATSLLYKMIQIGVTPDRVSLS 269
            ATSL++KM Q+G++PD V +S
Sbjct: 341 EATSLVFKMTQLGISPDAVCVS 362


>ref|XP_006845595.1| hypothetical protein AMTR_s00019p00203030 [Amborella trichopoda]
            gi|548848167|gb|ERN07270.1| hypothetical protein
            AMTR_s00019p00203030 [Amborella trichopoda]
          Length = 908

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/79 (41%), Positives = 49/79 (62%)
 Frame = +3

Query: 24   SRLLSSKKVIVSLFIKEFCAHGEFGYACKLLLDMKSYGGEVDVVAFTIVIGALCKRGFLK 203
            SRLLS+  V  ++ +K FC  G    A +LL +M SYG + D V+++ ++   CK G L+
Sbjct: 776  SRLLSNS-VTYNILMKGFCKLGSIRGATQLLTEMVSYGVKPDCVSYSTLLFQYCKMGDLE 834

Query: 204  VATSLLYKMIQIGVTPDRV 260
             A SL Y+M+  GV PD+V
Sbjct: 835  EALSLWYEMLSKGVKPDKV 853


>gb|EMT32075.1| hypothetical protein F775_20905 [Aegilops tauschii]
          Length = 404

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/78 (39%), Positives = 43/78 (55%)
 Frame = +3

Query: 30  LLSSKKVIVSLFIKEFCAHGEFGYACKLLLDMKSYGGEVDVVAFTIVIGALCKRGFLKVA 209
           L S   V  S  I  F   G+ G AC L  +M   G E+DVV ++ +I ALCK G +  A
Sbjct: 7   LRSPDVVTYSTVIHGFFKEGKIGKACTLFHEMMQQGVELDVVTYSSIIDALCKDGAMGKA 66

Query: 210 TSLLYKMIQIGVTPDRVS 263
              L++M+  GV PD+V+
Sbjct: 67  ELFLWQMVDNGVRPDKVT 84


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