BLASTX nr result

ID: Stemona21_contig00025991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00025991
         (351 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]    99   2e-21
ref|YP_004222255.1| hypothetical protein BevumaM_p016 [Beta vulg...    72   8e-11
tpg|DAA38268.1| TPA: putative cytochrome C oxidase subunit II fa...    69   9e-10
gb|AFW86920.1| LOW QUALITY PROTEIN: putative cytochrome C oxidas...    69   9e-10
gb|EHK62703.1| hypothetical protein M3S_K12 (mitochondrion) [Sor...    69   9e-10
gb|EHK62687.1| hypothetical protein M3S_E08, partial (mitochondr...    69   9e-10
gb|EHK62683.1| hypothetical protein M3S_J74 (mitochondrion) [Sor...    69   9e-10
gb|AFW86910.1| putative cytochrome C oxidase subunit II family p...    56   6e-06

>emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]
          Length = 201

 Score = 98.6 bits (244), Expect(2) = 2e-21
 Identities = 50/54 (92%), Positives = 52/54 (96%)
 Frame = +2

Query: 50  VVREASGLPVISHSRRRETIRTIACQKR*VEVVRPIPRNAPSIGAYGSILVVAG 211
           +VREASGLPVISHSRRRET+ TIACQKR VEVVRPIPRNAPSIGAYGSILVVAG
Sbjct: 1   MVREASGLPVISHSRRRETLITIACQKRGVEVVRPIPRNAPSIGAYGSILVVAG 54



 Score = 29.3 bits (64), Expect(2) = 2e-21
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +3

Query: 318 VAYNFGPNGRP 350
           VAYNFGPNGRP
Sbjct: 55  VAYNFGPNGRP 65


>ref|YP_004222255.1| hypothetical protein BevumaM_p016 [Beta vulgaris subsp. maritima]
           gi|346683133|ref|YP_004842062.1| hypothetical protein
           BemaM_p014 [Beta macrocarpa]
           gi|317905693|emb|CBX33235.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439773|emb|CBX33287.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148025|emb|CBJ20690.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500051|emb|CBX24867.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939217|emb|CBL52063.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 178

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 37/49 (75%), Positives = 39/49 (79%), Gaps = 3/49 (6%)
 Frame = +1

Query: 1   RSAPLNEGDESATKCTG---GS*SIWLTGNLPFPSSRDYKNYSMPETVS 138
           RSAPL+EGD SATKC      S SIWLTGNLPFPSSRD+ NYSMPET S
Sbjct: 130 RSAPLHEGDLSATKCLKVEYSSQSIWLTGNLPFPSSRDFSNYSMPETGS 178


>tpg|DAA38268.1| TPA: putative cytochrome C oxidase subunit II family protein [Zea
           mays]
          Length = 354

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +1

Query: 1   RSAPLNEGDESATKCTGGS*SIWLTGNLPFPSSRD 105
           RSAPLNEGD SATKCTGGS SIWLTG+LPFPSSRD
Sbjct: 320 RSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 354


>gb|AFW86920.1| LOW QUALITY PROTEIN: putative cytochrome C oxidase subunit II
           family protein [Zea mays]
          Length = 375

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +1

Query: 1   RSAPLNEGDESATKCTGGS*SIWLTGNLPFPSSRD 105
           RSAPLNEGD SATKCTGGS SIWLTG+LPFPSSRD
Sbjct: 341 RSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 375


>gb|EHK62703.1| hypothetical protein M3S_K12 (mitochondrion) [Sorghum bicolor]
          Length = 131

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +1

Query: 1   RSAPLNEGDESATKCTGGS*SIWLTGNLPFPSSRD 105
           RSAPLNEGD SATKCTGGS SIWLTG+LPFPSSRD
Sbjct: 97  RSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 131


>gb|EHK62687.1| hypothetical protein M3S_E08, partial (mitochondrion) [Sorghum
           bicolor]
          Length = 158

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +1

Query: 1   RSAPLNEGDESATKCTGGS*SIWLTGNLPFPSSRD 105
           RSAPLNEGD SATKCTGGS SIWLTG+LPFPSSRD
Sbjct: 124 RSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 158


>gb|EHK62683.1| hypothetical protein M3S_J74 (mitochondrion) [Sorghum bicolor]
          Length = 163

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +1

Query: 1   RSAPLNEGDESATKCTGGS*SIWLTGNLPFPSSRD 105
           RSAPLNEGD SATKCTGGS SIWLTG+LPFPSSRD
Sbjct: 129 RSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 163


>gb|AFW86910.1| putative cytochrome C oxidase subunit II family protein [Zea mays]
          Length = 70

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/27 (92%), Positives = 25/27 (92%)
 Frame = +1

Query: 271 MSDNGAEVVNLSAPQQWHTTLDLTAGP 351
           MSDNGA VVNLSAPQQWHTTLDL AGP
Sbjct: 1   MSDNGASVVNLSAPQQWHTTLDLRAGP 27


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