BLASTX nr result
ID: Stemona21_contig00025924
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00025924
(334 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008757440.1| photosystem I assembly protein Ycf3 (chlorop... 97 2e-18
ref|YP_398330.1| photosystem I assembly protein Ycf3 [Lactuca sa... 97 2e-18
ref|XP_003606041.1| Photosystem I assembly protein ycf3 [Medicag... 97 2e-18
gb|ACG30634.1| hypothetical protein [Zea mays] 97 2e-18
ref|XP_006431325.1| hypothetical protein CICLE_v10030468mg [Citr... 94 2e-17
gb|AEQ94200.1| photosystem I assembly protein Ycf3, partial [Fra... 93 3e-17
ref|XP_003599571.1| Photosystem I assembly protein Ycf3 [Medicag... 92 5e-17
ref|XP_003605620.1| Photosystem I assembly protein Ycf3 [Medicag... 91 1e-16
ref|YP_004940511.1| ycf3 gene product (chloroplast) [Boea hygrom... 90 3e-16
ref|YP_001381737.1| photosystem I assembly protein ycf3 [Medicag... 90 4e-16
gb|AFU96518.1| Ycf3, partial (chloroplast) [Bhesa sp. CCD-2012] 88 1e-15
gb|AHI43045.1| photosystem I assembly protein Ycf3 [Deschampsia ... 87 2e-15
dbj|BAB33185.1| hypothetical protein [Lotus japonicus] 87 2e-15
ref|NP_051060.2| photosystem I assembly protein Ycf3 [Arabidopsi... 87 2e-15
sp|P27324.2|YCF3_MAIZE RecName: Full=Photosystem I assembly prot... 87 2e-15
emb|CAA09250.1| YCF3 protein [Hordeum vulgare] gi|3452485|emb|CA... 87 2e-15
ref|NP_054934.1| photosystem I assembly protein Ycf3 [Spinacia o... 87 2e-15
ref|YP_009001994.1| photosystem I assembly protein Ycf3 (chlorop... 87 2e-15
ref|YP_009002259.1| photosystem I assembly protein Ycf3 (chlorop... 87 2e-15
emb|CCQ71621.1| photosystem I assembly protein Ycf3 (chloroplast... 87 2e-15
>ref|YP_008757440.1| photosystem I assembly protein Ycf3 (chloroplast) [Oryza rufipogon]
gi|552954478|gb|AGY48946.1| photosystem I assembly
protein Ycf3 (chloroplast) [Oryza rufipogon]
Length = 82
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/49 (91%), Positives = 46/49 (93%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICHNVRLSPL 28
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH VRLSPL
Sbjct: 34 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYVRLSPL 82
>ref|YP_398330.1| photosystem I assembly protein Ycf3 [Lactuca sativa]
gi|297840977|ref|XP_002888370.1| photosystem I assembly
protein Ycf3 [Arabidopsis lyrata subsp. lyrata]
gi|78675169|dbj|BAE47595.1| photosystem I assembly
protein ycf3 [Lactuca sativa]
gi|255631288|gb|ACU16011.1| unknown [Glycine max]
gi|297334211|gb|EFH64629.1| photosystem I assembly
protein Ycf3 [Arabidopsis lyrata subsp. lyrata]
gi|225200|prf||1211235AE ORF 82
Length = 82
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/49 (91%), Positives = 46/49 (93%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICHNVRLSPL 28
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH VRLSPL
Sbjct: 34 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYVRLSPL 82
>ref|XP_003606041.1| Photosystem I assembly protein ycf3 [Medicago truncatula]
gi|355507096|gb|AES88238.1| Photosystem I assembly
protein ycf3 [Medicago truncatula]
Length = 135
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/49 (91%), Positives = 46/49 (93%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICHNVRLSPL 28
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH VRLSPL
Sbjct: 87 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYVRLSPL 135
>gb|ACG30634.1| hypothetical protein [Zea mays]
Length = 82
Score = 97.4 bits (241), Expect = 2e-18
Identities = 45/49 (91%), Positives = 46/49 (93%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICHNVRLSPL 28
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH VRLSPL
Sbjct: 34 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYVRLSPL 82
>ref|XP_006431325.1| hypothetical protein CICLE_v10030468mg [Citrus clementina]
gi|567885976|ref|XP_006435531.1| hypothetical protein
CICLE_v10010876mg [Citrus clementina]
gi|567906098|ref|XP_006445528.1| hypothetical protein
CICLE_v10004110mg [Citrus clementina]
gi|557533397|gb|ESR44565.1| hypothetical protein
CICLE_v10030468mg [Citrus clementina]
gi|557537685|gb|ESR48771.1| hypothetical protein
CICLE_v10010876mg [Citrus clementina]
gi|557547808|gb|ESR58768.1| hypothetical protein
CICLE_v10004110mg [Citrus clementina]
Length = 82
Score = 93.6 bits (231), Expect = 2e-17
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICHNVRLSPL 28
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH VRLS L
Sbjct: 34 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYVRLSLL 82
>gb|AEQ94200.1| photosystem I assembly protein Ycf3, partial [Fraxinus chinensis]
Length = 80
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICHNVRLS 34
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH VRLS
Sbjct: 34 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYVRLS 80
>ref|XP_003599571.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
gi|355488619|gb|AES69822.1| Photosystem I assembly
protein Ycf3 [Medicago truncatula]
Length = 160
Score = 92.4 bits (228), Expect = 5e-17
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICHNVRLS 34
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH VR+S
Sbjct: 46 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYVRMS 92
>ref|XP_003605620.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
gi|355506675|gb|AES87817.1| Photosystem I assembly
protein Ycf3 [Medicago truncatula]
Length = 201
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICHNVRLS 34
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM +ICH VR+S
Sbjct: 87 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMALICHYVRMS 133
>ref|YP_004940511.1| ycf3 gene product (chloroplast) [Boea hygrometrica]
gi|340549408|gb|AEK53230.1| hypothetical chloroplast
RF34 (chloroplast) [Boea hygrometrica]
Length = 171
Score = 90.1 bits (222), Expect = 3e-16
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICHNVR 40
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH VR
Sbjct: 78 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYVR 122
>ref|YP_001381737.1| photosystem I assembly protein ycf3 [Medicago truncatula]
Length = 163
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICHNVR 40
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH +R
Sbjct: 76 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYIR 120
>gb|AFU96518.1| Ycf3, partial (chloroplast) [Bhesa sp. CCD-2012]
Length = 169
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICHNVRLSPLRK 22
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH +RK
Sbjct: 77 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRK 127
>gb|AHI43045.1| photosystem I assembly protein Ycf3 [Deschampsia antarctica]
Length = 170
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICH 49
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH
Sbjct: 76 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 117
>dbj|BAB33185.1| hypothetical protein [Lotus japonicus]
Length = 126
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICH 49
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH
Sbjct: 34 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 75
>ref|NP_051060.2| photosystem I assembly protein Ycf3 [Arabidopsis thaliana]
gi|157011961|ref|YP_001123287.2| hypothetical protein
BaveCp022 [Barbarea verna]
gi|157011963|ref|YP_001123638.2| photosystem I assembly
protein Ycf3 [Lepidium virginicum]
gi|157011964|ref|YP_001123815.2| photosystem I assembly
protein Ycf3 [Nasturtium officinale]
gi|157011966|ref|YP_001123200.2| hypothetical protein
ArhiCp021 [Arabis hirsuta]
gi|157011967|ref|YP_001123463.2| photosystem I assembly
protein Ycf3 [Crucihimalaya wallichii]
gi|157011970|ref|YP_001123551.2| hypothetical protein
DrneCp021 [Draba nemorosa]
gi|157011971|ref|YP_001123726.2| photosystem I assembly
protein Ycf3 [Lobularia maritima]
gi|383930513|ref|YP_005089953.1| ycf3 gene product
(chloroplast) [Brassica napus]
gi|484759646|ref|YP_007889943.1| photosystem I assembly
protein Ycf3 (chloroplast) [Pachycladon cheesemanii]
gi|575771007|ref|YP_009000333.1| hypothetical protein
BN845_0330 (chloroplast) [Arabis alpina]
gi|297837953|ref|XP_002886858.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|48429178|sp|P61843.1|YCF3_ARATH RecName:
Full=Photosystem I assembly protein Ycf3
gi|48429179|sp|P61844.1|YCF3_SINAL RecName:
Full=Photosystem I assembly protein Ycf3
gi|68053007|sp|Q53CF3.1|YCF3_BRAJU RecName:
Full=Photosystem I assembly protein Ycf3
gi|4995840|emb|CAB44315.1| YCF3 protein [Sinapis alba]
gi|50726919|gb|AAT81155.1| YCF3 [Brassica juncea]
gi|262400810|gb|ACY66299.1| photosystem I assembly
protein Ycf3 [Brassica napus]
gi|297332699|gb|EFH63117.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|392934154|gb|AFM92280.1| photosystem I assembly
protein Ycf3 (chloroplast) [Pachycladon cheesemanii]
gi|571025805|emb|CCW28180.1| hypothetical protein
BN845_0330 (chloroplast) [Arabis alpina]
Length = 168
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICH 49
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH
Sbjct: 76 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 117
>sp|P27324.2|YCF3_MAIZE RecName: Full=Photosystem I assembly protein Ycf3; AltName:
Full=IRF170 gi|93140420|sp|P0C160.1|YCF3_SACHY RecName:
Full=Photosystem I assembly protein Ycf3
Length = 170
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICH 49
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH
Sbjct: 76 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 117
>emb|CAA09250.1| YCF3 protein [Hordeum vulgare] gi|3452485|emb|CAA09251.1| putative
YCF3 protein [Hordeum vulgare]
Length = 97
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICH 49
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH
Sbjct: 13 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 54
>ref|NP_054934.1| photosystem I assembly protein Ycf3 [Spinacia oleracea]
gi|18203267|sp|Q9M3M5.1|YCF3_SPIOL RecName:
Full=Photosystem I assembly protein Ycf3
gi|7636107|emb|CAB88727.1| ycf3 protein [Spinacia
oleracea]
Length = 165
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICH 49
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH
Sbjct: 73 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 114
>ref|YP_009001994.1| photosystem I assembly protein Ycf3 (chloroplast) [Puelia
olyriformis] gi|469474004|gb|AGH33774.1| photosystem I
assembly protein Ycf3 (chloroplast) [Puelia olyriformis]
Length = 172
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICH 49
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH
Sbjct: 78 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 119
>ref|YP_009002259.1| photosystem I assembly protein Ycf3 (chloroplast) [Pinguicula
ehlersiae] gi|575882141|emb|CDL78815.1| photosystem I
assembly protein Ycf3 (chloroplast) [Pinguicula
ehlersiae]
Length = 168
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICH 49
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH
Sbjct: 76 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 117
>emb|CCQ71621.1| photosystem I assembly protein Ycf3 (chloroplast) [Salvia
miltiorrhiza]
Length = 168
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -2
Query: 174 YNIGLIHKSNGEHTKALEYYFRALERSPFLPQAFNNMVVICH 49
YNIGLIH SNGEHTKALEYYFRALER+PFLPQAFNNM VICH
Sbjct: 76 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 117