BLASTX nr result

ID: Stemona21_contig00025697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00025697
         (297 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-l...    60   4e-07
ref|XP_004293728.1| PREDICTED: multiple RNA-binding domain-conta...    55   7e-06

>ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
          Length = 983

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/55 (50%), Positives = 35/55 (63%)
 Frame = -3

Query: 229 QLAAGVLSKSLREDSLRTSSTEQLDEEIVKDDVVSDMDYFKSRVKKNWSDSETDD 65
           Q+ A +     RED L  S  +     +  D+V+SDMDYFKSRVKK WSDSE+DD
Sbjct: 300 QMQADLDESDEREDELSDSQMDTKPNNLAHDEVISDMDYFKSRVKKKWSDSESDD 354


>ref|XP_004293728.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Fragaria vesca subsp. vesca]
          Length = 805

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
 Frame = -3

Query: 253 IGNG-KKDQQLAAGVLSKSLREDSLRTSSTEQLDE----EIVKDDVVSDMDYFKSRVKKN 89
           IG G +K ++   G   KS  E  +     E +++     + KD+VVSDMDYFKSRVKK+
Sbjct: 157 IGRGERKMEERRKGDEEKSAAEMDVDVEEEEDVEKGESHNVAKDNVVSDMDYFKSRVKKD 216

Query: 88  WSDSETDD 65
           WSDSE+ D
Sbjct: 217 WSDSESSD 224


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