BLASTX nr result
ID: Stemona21_contig00025186
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00025186
(628 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT08661.1| single-stranded DNA-binding replication protein A... 114 2e-23
dbj|BAK07429.1| predicted protein [Hordeum vulgare subsp. vulgare] 92 9e-17
gb|EMJ28654.1| hypothetical protein PRUPE_ppa009666mg [Prunus pe... 87 4e-15
ref|XP_006648165.1| PREDICTED: replication protein A 32 kDa subu... 87 5e-15
dbj|BAB40535.1| replication protein A 30kDa [Oryza sativa Japoni... 83 6e-14
ref|NP_001048604.1| Os02g0829100 [Oryza sativa Japonica Group] g... 82 2e-13
gb|EEE58102.1| hypothetical protein OsJ_08977 [Oryza sativa Japo... 82 2e-13
gb|EEC74294.1| hypothetical protein OsI_09546 [Oryza sativa Indi... 81 3e-13
ref|XP_004977372.1| PREDICTED: replication protein A 32 kDa subu... 79 8e-13
sp|Q5Z8L1.2|RFA2C_ORYSJ RecName: Full=Replication protein A 32 k... 79 1e-12
ref|XP_004954499.1| PREDICTED: replication protein A 32 kDa subu... 78 2e-12
gb|EMT08397.1| Replication protein A 32 kDa subunit [Aegilops ta... 78 2e-12
ref|XP_003570718.1| PREDICTED: replication protein A 32 kDa subu... 78 2e-12
gb|ACG35840.1| replication factor A [Zea mays] gi|223973475|gb|A... 77 3e-12
gb|ACG32166.1| hypothetical protein [Zea mays] 77 3e-12
gb|AFW72453.1| hypothetical protein ZEAMMB73_145941 [Zea mays] 76 9e-12
gb|AFW72450.1| hypothetical protein ZEAMMB73_145941 [Zea mays] 76 9e-12
ref|XP_006361577.1| PREDICTED: replication protein A 32 kDa subu... 75 1e-11
ref|XP_002454830.1| hypothetical protein SORBIDRAFT_04g038190 [S... 74 3e-11
ref|XP_002468676.1| hypothetical protein SORBIDRAFT_01g050092 [S... 74 3e-11
>gb|AAT08661.1| single-stranded DNA-binding replication protein A [Hyacinthus
orientalis]
Length = 88
Score = 114 bits (285), Expect = 2e-23
Identities = 55/84 (65%), Positives = 63/84 (75%)
Frame = -3
Query: 593 KAYQTSASNQFSAHTDVKAPEGNFYHLVLDVFQEPSSLAREHGLHVDEVVRRLGMPVNKI 414
K QT +Q S HT E + Y +VLDVFQEPSSLA +HG+HVDEVV+RLG+P KI
Sbjct: 4 KREQTPVPSQISTHTSNGGSETDIYKMVLDVFQEPSSLASDHGVHVDEVVKRLGLPEKKI 63
Query: 413 KEAIDYHVDVGQIYSTIDDNHFKS 342
KEAIDYHVD G IYSTIDD HFK+
Sbjct: 64 KEAIDYHVDTGHIYSTIDDYHFKA 87
>dbj|BAK07429.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 277
Score = 92.4 bits (228), Expect = 9e-17
Identities = 43/88 (48%), Positives = 60/88 (68%)
Frame = -3
Query: 602 NDTKAYQTSASNQFSAHTDVKAPEGNFYHLVLDVFQEPSSLAREHGLHVDEVVRRLGMPV 423
N+ + SN A + E +FY VL+VF+EP+++ +HG+H+D++ +R +P
Sbjct: 187 NEAATPPSVKSNPAPAASGTNGSETDFYTQVLNVFREPANMESDHGVHMDDIAKRFRLPA 246
Query: 422 NKIKEAIDYHVDVGQIYSTIDDNHFKSA 339
KIKEAIDYHVDVG IYSTIDD H+KSA
Sbjct: 247 LKIKEAIDYHVDVGHIYSTIDDFHYKSA 274
>gb|EMJ28654.1| hypothetical protein PRUPE_ppa009666mg [Prunus persica]
Length = 282
Score = 87.0 bits (214), Expect = 4e-15
Identities = 47/99 (47%), Positives = 63/99 (63%)
Frame = -3
Query: 626 SAIQTPARNDTKAYQTSASNQFSAHTDVKAPEGNFYHLVLDVFQEPSSLAREHGLHVDEV 447
S++ TP R+ + YQT+ SNQFS V +G LVLD Q+PSS+ +E G+H DE+
Sbjct: 185 SSLSTPVRSGSSGYQTAPSNQFSGQVSVDGIKG-CDQLVLDYLQQPSSIGKEKGIHRDEL 243
Query: 446 VRRLGMPVNKIKEAIDYHVDVGQIYSTIDDNHFKSACNG 330
+ L +PV KI EAI + G IYSTID+ H+KSA G
Sbjct: 244 SQHLKVPVEKILEAIRSLEEEGLIYSTIDEFHYKSAAYG 282
>ref|XP_006648165.1| PREDICTED: replication protein A 32 kDa subunit A-like [Oryza
brachyantha]
Length = 279
Score = 86.7 bits (213), Expect = 5e-15
Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 14/112 (12%)
Frame = -3
Query: 626 SAIQTPARNDTKAYQTSASNQFSAHTDVKAPEGN--------------FYHLVLDVFQEP 489
S++ +PA+ ++ A +S+S FS T + + N + VL +F+EP
Sbjct: 168 SSLASPAKTNS-AMGSSSSYGFSEMTTPTSAKSNPAPVSSVTDGSETDLHEQVLKIFREP 226
Query: 488 SSLAREHGLHVDEVVRRLGMPVNKIKEAIDYHVDVGQIYSTIDDNHFKSACN 333
+++ EHG+HVDE+V+R +P KI+EA+DY VDVG IYSTIDD H+KSA N
Sbjct: 227 ANVESEHGVHVDEIVKRFRLPTPKIREAVDYLVDVGHIYSTIDDFHYKSAFN 278
>dbj|BAB40535.1| replication protein A 30kDa [Oryza sativa Japonica Group]
Length = 279
Score = 83.2 bits (204), Expect = 6e-14
Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 14/112 (12%)
Frame = -3
Query: 626 SAIQTPARNDTKAYQTSASNQFSAHTDVKAPEGNFYHL--------------VLDVFQEP 489
S I +PA+ + A +S+SN FS T + + N + VL+VF+EP
Sbjct: 168 SQIGSPAKTYS-AMGSSSSNGFSEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREP 226
Query: 488 SSLAREHGLHVDEVVRRLGMPVNKIKEAIDYHVDVGQIYSTIDDNHFKSACN 333
+++ EHG+H+DE+V+RL +P KIK AIDY D+G IYSTID++H+KSA N
Sbjct: 227 ANVESEHGVHIDEIVKRLRLPEAKIKVAIDYLADIGHIYSTIDESHYKSAFN 278
>ref|NP_001048604.1| Os02g0829100 [Oryza sativa Japonica Group]
gi|75324106|sp|Q6K9U2.1|RFA2A_ORYSJ RecName:
Full=Replication protein A 32 kDa subunit A;
Short=OsRPA32A; AltName: Full=OsRPA32-1; AltName:
Full=Replication factor A protein 2A; AltName:
Full=Replication protein A 2A gi|9801268|emb|CAC03572.1|
replication protein A2 [Oryza sativa]
gi|48716324|dbj|BAD22936.1| replication protein A2
[Oryza sativa Japonica Group]
gi|113538135|dbj|BAF10518.1| Os02g0829100 [Oryza sativa
Japonica Group] gi|215737037|dbj|BAG95966.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 279
Score = 81.6 bits (200), Expect = 2e-13
Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 14/112 (12%)
Frame = -3
Query: 626 SAIQTPARNDTKAYQTSASNQFSAHTDVKAPEGNFYHL--------------VLDVFQEP 489
S I +PA+ + A +S+SN FS T + + N + VL+VF+EP
Sbjct: 168 SQIGSPAKTYS-AMGSSSSNGFSEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREP 226
Query: 488 SSLAREHGLHVDEVVRRLGMPVNKIKEAIDYHVDVGQIYSTIDDNHFKSACN 333
+++ EHG+H+DE+V+R +P KIK AIDY D+G IYSTID++H+KSA N
Sbjct: 227 ANVESEHGVHIDEIVKRFRLPEAKIKVAIDYLADIGHIYSTIDESHYKSAFN 278
>gb|EEE58102.1| hypothetical protein OsJ_08977 [Oryza sativa Japonica Group]
Length = 278
Score = 81.6 bits (200), Expect = 2e-13
Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 14/112 (12%)
Frame = -3
Query: 626 SAIQTPARNDTKAYQTSASNQFSAHTDVKAPEGNFYHL--------------VLDVFQEP 489
S I +PA+ + A +S+SN FS T + + N + VL+VF+EP
Sbjct: 167 SQIGSPAKTYS-AMGSSSSNGFSEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREP 225
Query: 488 SSLAREHGLHVDEVVRRLGMPVNKIKEAIDYHVDVGQIYSTIDDNHFKSACN 333
+++ EHG+H+DE+V+R +P KIK AIDY D+G IYSTID++H+KSA N
Sbjct: 226 ANVESEHGVHIDEIVKRFRLPEAKIKVAIDYLADIGHIYSTIDESHYKSAFN 277
>gb|EEC74294.1| hypothetical protein OsI_09546 [Oryza sativa Indica Group]
Length = 279
Score = 80.9 bits (198), Expect = 3e-13
Identities = 35/60 (58%), Positives = 49/60 (81%)
Frame = -3
Query: 512 VLDVFQEPSSLAREHGLHVDEVVRRLGMPVNKIKEAIDYHVDVGQIYSTIDDNHFKSACN 333
VL+VF+EP+++ EHG+H+DE+V+R +P KIK AIDY D+G IYSTID++H+KSA N
Sbjct: 219 VLNVFREPANVESEHGVHIDEIVKRFRLPEAKIKVAIDYLADIGHIYSTIDESHYKSAFN 278
>ref|XP_004977372.1| PREDICTED: replication protein A 32 kDa subunit A-like [Setaria
italica]
Length = 275
Score = 79.3 bits (194), Expect = 8e-13
Identities = 44/109 (40%), Positives = 67/109 (61%), Gaps = 15/109 (13%)
Frame = -3
Query: 620 IQTPARNDTKAYQTSASNQFSAH---TDVKA------------PEGNFYHLVLDVFQEPS 486
+ +PAR + + SASN F A T +K+ E + VL++F EP+
Sbjct: 168 VGSPARTSS-SMGASASNGFGASSTPTSLKSNPAPVTSGASGSDETDLNTQVLNIFNEPA 226
Query: 485 SLAREHGLHVDEVVRRLGMPVNKIKEAIDYHVDVGQIYSTIDDNHFKSA 339
++ EHG+H+DE+++R +P +KI+EAI Y+ DVG IYSTIDD H+K+A
Sbjct: 227 NIESEHGVHIDEIIKRFKLPESKIREAIVYNADVGHIYSTIDDFHYKAA 275
>sp|Q5Z8L1.2|RFA2C_ORYSJ RecName: Full=Replication protein A 32 kDa subunit C;
Short=OsRPA32C; AltName: Full=OsRPA32-3; AltName:
Full=Replication factor A protein 2C; AltName:
Full=Replication protein A 2C
Length = 430
Score = 78.6 bits (192), Expect = 1e-12
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = -3
Query: 572 SNQFSAHTDVKAPEGNFYHLVLDVFQEPSSLAREHGLHVDEVVRRLGMPVNKIKEAIDYH 393
+NQFSA++ + + +VL+ Q+P LA EHG HVDE+VRR GMP I + +
Sbjct: 350 ANQFSAYSSTGGLQHDPQRMVLEALQQPDILALEHGAHVDELVRRTGMPKANIMGVVKHL 409
Query: 392 VDVGQIYSTIDDNHFKSACNG 330
G +Y TIDDNH KS CNG
Sbjct: 410 AAAGFVYWTIDDNHVKSMCNG 430
>ref|XP_004954499.1| PREDICTED: replication protein A 32 kDa subunit A-like [Setaria
italica]
Length = 274
Score = 78.2 bits (191), Expect = 2e-12
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 14/110 (12%)
Frame = -3
Query: 626 SAIQTPARNDTKAYQTSASNQFSAH---TDVKA--------PEGNFYHL---VLDVFQEP 489
S + +PAR ++ + S SN FS T +K+ GN L VL++F+EP
Sbjct: 163 SKVGSPARTNS-SMGLSVSNGFSESSTPTSLKSNPAPVTGGANGNDTDLNTQVLNIFREP 221
Query: 488 SSLAREHGLHVDEVVRRLGMPVNKIKEAIDYHVDVGQIYSTIDDNHFKSA 339
+++ EHG+H+ E+V+RL +P KI+EAI Y+ D G IYSTIDD HFKSA
Sbjct: 222 ANIESEHGVHIHEIVKRLKLPEEKIREAIVYNEDCGHIYSTIDDFHFKSA 271
>gb|EMT08397.1| Replication protein A 32 kDa subunit [Aegilops tauschii]
Length = 296
Score = 78.2 bits (191), Expect = 2e-12
Identities = 43/99 (43%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Frame = -3
Query: 626 SAIQTPARNDTKAYQTSAS---NQFSAHTDVKAPEGNFYHLVLDVFQEPSSLAREHGLHV 456
S++ TP N T S N + E +FY VL+VF+EP+++ +HG+HV
Sbjct: 204 SSVGTPFSNRLSEAATPPSVKSNPAPVTSGTNGSETDFYTQVLNVFREPANIESDHGVHV 263
Query: 455 DEVVRRLGMPVNKIKEAIDYHVDVGQIYSTIDDNHFKSA 339
D++ +R EAIDYHVDVG IYSTIDD H+KSA
Sbjct: 264 DDIAKR---------EAIDYHVDVGHIYSTIDDFHYKSA 293
>ref|XP_003570718.1| PREDICTED: replication protein A 32 kDa subunit-like [Brachypodium
distachyon]
Length = 278
Score = 78.2 bits (191), Expect = 2e-12
Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 14/110 (12%)
Frame = -3
Query: 626 SAIQTPARNDTKAYQTSASNQFSAHTDV-----KAP---------EGNFYHLVLDVFQEP 489
S + +PA+ ++ A TS SN S T +AP + + VL + EP
Sbjct: 167 SKVGSPAKTNS-AIGTSLSNSLSEATTPTSLKSQAPVTSGTDGSGTDDLHTQVLKILCEP 225
Query: 488 SSLAREHGLHVDEVVRRLGMPVNKIKEAIDYHVDVGQIYSTIDDNHFKSA 339
++ EHG+H+DE+ +R +P KIKEAI Y+VD+G IYSTIDD HFKSA
Sbjct: 226 ANAESEHGVHIDEITKRFKLPAEKIKEAIYYNVDIGHIYSTIDDFHFKSA 275
>gb|ACG35840.1| replication factor A [Zea mays] gi|223973475|gb|ACN30925.1| unknown
[Zea mays] gi|413937901|gb|AFW72452.1| Replication
factor A [Zea mays]
Length = 272
Score = 77.4 bits (189), Expect = 3e-12
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Frame = -3
Query: 593 KAYQTSASNQFSAH--TDVKAPEGNFY-HLVLDVFQEPSSLAREHGLHVDEVVRRLGMPV 423
K Y ++A+ AH + +GN+ +LVL VF +PS + +EHGLH+ +V+ RL +P
Sbjct: 182 KIYSSAATYGGVAHAPSQPNPVDGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPD 241
Query: 422 NKIKEAIDYHVDVGQIYSTIDDNHFKSACNG 330
+ + AI HVDVG IY+TIDD H+KS NG
Sbjct: 242 DVVSAAIQGHVDVGNIYNTIDDFHYKSVRNG 272
>gb|ACG32166.1| hypothetical protein [Zea mays]
Length = 183
Score = 77.4 bits (189), Expect = 3e-12
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Frame = -3
Query: 593 KAYQTSASNQFSAH--TDVKAPEGNFY-HLVLDVFQEPSSLAREHGLHVDEVVRRLGMPV 423
K Y ++A+ AH + +GN+ +LVL VF +PS + +EHGLH+ +V+ RL +P
Sbjct: 93 KIYSSAATYGGVAHAPSQPNPVDGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPD 152
Query: 422 NKIKEAIDYHVDVGQIYSTIDDNHFKSACNG 330
+ + AI HVDVG IY+TIDD H+KS NG
Sbjct: 153 DVVSAAIQGHVDVGNIYNTIDDFHYKSVRNG 183
>gb|AFW72453.1| hypothetical protein ZEAMMB73_145941 [Zea mays]
Length = 273
Score = 75.9 bits (185), Expect = 9e-12
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = -3
Query: 533 EGNFY-HLVLDVFQEPSSLAREHGLHVDEVVRRLGMPVNKIKEAIDYHVDVGQIYSTIDD 357
+GN+ +LVL VF +PS + +EHGLH+ +V+ RL +P + + AI HVDVG IY+TIDD
Sbjct: 205 DGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDD 264
Query: 356 NHFKSACNG 330
H+KS NG
Sbjct: 265 FHYKSVRNG 273
>gb|AFW72450.1| hypothetical protein ZEAMMB73_145941 [Zea mays]
Length = 98
Score = 75.9 bits (185), Expect = 9e-12
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = -3
Query: 533 EGNFY-HLVLDVFQEPSSLAREHGLHVDEVVRRLGMPVNKIKEAIDYHVDVGQIYSTIDD 357
+GN+ +LVL VF +PS + +EHGLH+ +V+ RL +P + + AI HVDVG IY+TIDD
Sbjct: 30 DGNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDD 89
Query: 356 NHFKSACNG 330
H+KS NG
Sbjct: 90 FHYKSVRNG 98
>ref|XP_006361577.1| PREDICTED: replication protein A 32 kDa subunit A-like [Solanum
tuberosum]
Length = 272
Score = 75.5 bits (184), Expect = 1e-11
Identities = 40/99 (40%), Positives = 64/99 (64%), Gaps = 5/99 (5%)
Frame = -3
Query: 623 AIQTPARNDTKAYQTSAS-----NQFSAHTDVKAPEGNFYHLVLDVFQEPSSLAREHGLH 459
++ TP+++D A ++ S NQFSA+ + +G +V+D ++PSSLA+E G+H
Sbjct: 172 SVSTPSKSDVPAAVSAPSSGYNSNQFSANLSIDGLKG-IEKIVIDYLEQPSSLAQEKGIH 230
Query: 458 VDEVVRRLGMPVNKIKEAIDYHVDVGQIYSTIDDNHFKS 342
+E+ + L +P+ KIKEAI+ G +YSTID+ HFKS
Sbjct: 231 RNEIAQHLRVPLEKIKEAIESLESEGLVYSTIDECHFKS 269
>ref|XP_002454830.1| hypothetical protein SORBIDRAFT_04g038190 [Sorghum bicolor]
gi|241934661|gb|EES07806.1| hypothetical protein
SORBIDRAFT_04g038190 [Sorghum bicolor]
Length = 278
Score = 74.3 bits (181), Expect = 3e-11
Identities = 36/59 (61%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = -3
Query: 512 VLDVFQEPSSLAREHGLHVDEVVRRLG-MPVNKIKEAIDYHVDVGQIYSTIDDNHFKSA 339
VL F EP++L EHG+HVDEV ++ +P +KIKEAI +HVD G +YSTIDD HFKSA
Sbjct: 217 VLHFFSEPANLESEHGVHVDEVYKQFKQLPKDKIKEAIAFHVDAGHLYSTIDDFHFKSA 275
>ref|XP_002468676.1| hypothetical protein SORBIDRAFT_01g050092 [Sorghum bicolor]
gi|241922530|gb|EER95674.1| hypothetical protein
SORBIDRAFT_01g050092 [Sorghum bicolor]
Length = 83
Score = 74.3 bits (181), Expect = 3e-11
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = -3
Query: 533 EGNFYHLVLDVFQEPSSLAREHGLHVDEVVRRLGMPVNKIKEAIDYHVDVGQIYSTIDDN 354
E + VLD+ EP+++ REHG+HVDE+V+R +P I++AI VD+G IY+TIDD
Sbjct: 11 ESDLLKQVLDILHEPANIEREHGVHVDEIVKRFRLPERNIRDAIMQLVDMGCIYNTIDDF 70
Query: 353 HFKSA 339
HFKSA
Sbjct: 71 HFKSA 75