BLASTX nr result

ID: Stemona21_contig00024948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00024948
         (517 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ85504.1| predicted protein [Hordeum vulgare subsp. vulgar...    47   5e-07
gb|AFW80483.1| hypothetical protein ZEAMMB73_407628, partial [Ze...    45   3e-06
tpg|DAA43864.1| TPA: MFP1 attachment factor 1 [Zea mays]               48   5e-06
gb|ACG25044.1| MFP1 attachment factor 1 [Zea mays]                     48   5e-06
ref|NP_001149706.1| MFP1 attachment factor 1 [Zea mays] gi|19562...    47   9e-06

>dbj|BAJ85504.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326507370|dbj|BAK03078.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 138

 Score = 47.4 bits (111), Expect(2) = 5e-07
 Identities = 25/67 (37%), Positives = 35/67 (52%)
 Frame = +1

Query: 250 VLSKRYGVMPLDXXXXXXXXXXXXXXXXXXIGDAVVASVDHGIDALQIYSKEVSIRVLEF 429
           +L KRYG +P                    +     ASV+ GI+ALQ+YSKEVS R+L+F
Sbjct: 52  LLCKRYGAVPAADAEPAARAIEAEAFDAAAVAGGAAASVEEGIEALQLYSKEVSRRLLDF 111

Query: 430 AKAHAPA 450
            K+ + A
Sbjct: 112 VKSRSAA 118



 Score = 32.0 bits (71), Expect(2) = 5e-07
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +3

Query: 156 ADDAAALPSTPFSLTIWPPSQCTRD 230
           A  AA   + PFS +IWPP+Q TRD
Sbjct: 13  AGAAAGDEAAPFSFSIWPPTQRTRD 37


>gb|AFW80483.1| hypothetical protein ZEAMMB73_407628, partial [Zea mays]
          Length = 213

 Score = 44.7 bits (104), Expect(2) = 3e-06
 Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = +1

Query: 250 VLSKRYGVMPLDXXXXXXXXXXXXXXXXXXIGDAVVASVDHGIDALQIYSKEVSIRVLEF 429
           VL KRYG +P+                       V ASV+ G +ALQ YSKEVS R+L+F
Sbjct: 125 VLCKRYGAVPVADAEPAARAIETEAFDAVAAAGGVAASVEEGNEALQSYSKEVSHRLLDF 184

Query: 430 AKA---HAPAE 453
            K+   HA A+
Sbjct: 185 VKSRSHHAKAD 195



 Score = 32.0 bits (71), Expect(2) = 3e-06
 Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
 Frame = +3

Query: 69  PLLHFHNPSSHSPTMAVEGEEAGEPTRQQADDAAALP-----STPFSLTIWPPSQCTRD 230
           P L F  PS+ S       +    P    A  AA  P     S  FS +IWPP+Q TRD
Sbjct: 54  PTLGF--PSNSSVRFQKNSQRRAGPVTAPAAAAAPAPAGGNHSPAFSFSIWPPTQRTRD 110


>tpg|DAA43864.1| TPA: MFP1 attachment factor 1 [Zea mays]
          Length = 144

 Score = 47.8 bits (112), Expect(2) = 5e-06
 Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
 Frame = +1

Query: 250 VLSKRYGVMPL-DXXXXXXXXXXXXXXXXXXIGDAVVASVDHGIDALQIYSKEVSIRVLE 426
           +L KRYG +P  D                   G A  ASV+ GI+ALQ YSKEVS R+L+
Sbjct: 51  ILCKRYGAVPAADAEPAARAIEAEAFDAAASTGGAAAASVEEGIEALQFYSKEVSRRLLD 110

Query: 427 FAKAH-APAESG 459
           F K+  A A++G
Sbjct: 111 FVKSRSADAKAG 122



 Score = 28.1 bits (61), Expect(2) = 5e-06
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 180 STPFSLTIWPPSQCTRD 230
           S  FS +IWPP+Q TRD
Sbjct: 20  SPAFSFSIWPPTQRTRD 36


>gb|ACG25044.1| MFP1 attachment factor 1 [Zea mays]
          Length = 144

 Score = 47.8 bits (112), Expect(2) = 5e-06
 Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
 Frame = +1

Query: 250 VLSKRYGVMPL-DXXXXXXXXXXXXXXXXXXIGDAVVASVDHGIDALQIYSKEVSIRVLE 426
           +L KRYG +P  D                   G A  ASV+ GI+ALQ YSKEVS R+L+
Sbjct: 51  ILCKRYGAVPAADAEPAARAIEAVAFDAAASTGGAAAASVEEGIEALQFYSKEVSRRLLD 110

Query: 427 FAKAH-APAESG 459
           F K+  A A++G
Sbjct: 111 FVKSRSADAKAG 122



 Score = 28.1 bits (61), Expect(2) = 5e-06
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 180 STPFSLTIWPPSQCTRD 230
           S  FS +IWPP+Q TRD
Sbjct: 20  SPAFSFSIWPPTQRTRD 36


>ref|NP_001149706.1| MFP1 attachment factor 1 [Zea mays] gi|195629618|gb|ACG36450.1|
           MFP1 attachment factor 1 [Zea mays]
          Length = 144

 Score = 47.0 bits (110), Expect(2) = 9e-06
 Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
 Frame = +1

Query: 250 VLSKRYGVMPL-DXXXXXXXXXXXXXXXXXXIGDAVVASVDHGIDALQIYSKEVSIRVLE 426
           +L KRYG +P  D                   G A  ASV+ GI+ALQ YSKEVS R+L+
Sbjct: 51  ILCKRYGAVPAADAEPAARAIEXEAXDAAASTGGAAAASVEEGIEALQFYSKEVSRRLLD 110

Query: 427 FAKAH-APAESG 459
           F K   A A++G
Sbjct: 111 FVKXRSADAKAG 122



 Score = 28.1 bits (61), Expect(2) = 9e-06
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 180 STPFSLTIWPPSQCTRD 230
           S  FS +IWPP+Q TRD
Sbjct: 20  SPAFSFSIWPPTQRTRD 36


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