BLASTX nr result
ID: Stemona21_contig00024486
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00024486
(884 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY24207.1| Non-LTR retroelement reverse transcriptase [Theob... 62 2e-07
gb|EOX98014.1| Ribonuclease H protein [Theobroma cacao] 62 3e-07
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A... 62 3e-07
gb|EOY02864.1| Ribonuclease H protein [Theobroma cacao] 62 4e-07
gb|EOX96783.1| Uncharacterized protein TCM_005954 [Theobroma cacao] 60 8e-07
ref|XP_004305134.1| PREDICTED: uncharacterized protein LOC101315... 59 2e-06
gb|ABK28206.1| unknown [Arabidopsis thaliana] 59 2e-06
ref|NP_180979.1| polynucleotidyl transferase, ribonuclease H-lik... 59 2e-06
ref|XP_006289152.1| hypothetical protein CARUB_v10002590mg, part... 59 3e-06
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 58 5e-06
gb|EOY02239.1| Uncharacterized protein TCM_016763 [Theobroma cacao] 57 7e-06
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 57 7e-06
>gb|EOY24207.1| Non-LTR retroelement reverse transcriptase [Theobroma cacao]
Length = 391
Score = 62.4 bits (150), Expect = 2e-07
Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 2/207 (0%)
Frame = +1
Query: 151 VIAYVCWLIWKGRNSFIFEGKIKAHSTIFWQSIRMAKEYINTNNIYFCHGDEEKDLAACW 330
V CW WK RN FIFEG+ ++ + + +N++N + +
Sbjct: 192 VFGIACWYTWKWRNLFIFEGR---ELSVEGRLSIIKSMAVNSHNTW-----------STP 237
Query: 331 GLTSRPVAKKSNIYTSWQAMEKDCIYLNTDAAYDRKTLHAGLGAVLRDPDGRPLLLASGT 510
+ S + + I W KD I +N+D + A G VLRD G ++ +
Sbjct: 238 SIISGGMRHQEEILVGWSPPPKDWIAVNSDGVFKSAARTAAAGGVLRDAHGTWIVGYACK 297
Query: 511 GRVRNVLEAECXXXXXXXXXXXXXXPNQRIQIQTDSALLALFLNTNKPQPWYIQSSIKAI 690
+ L E +++++Q+D+ + ++ + P I+AI
Sbjct: 298 LETSSGLRVELWGFYKGLQLAWERG-FRKVKLQSDNKAMVQAISFSSVHPCSNLDLIRAI 356
Query: 691 KSMLTP--QDSVQHVYREANQVADFLS 765
K ML + ++ H+YREAN ADF+S
Sbjct: 357 KGMLGRHWEVNISHIYREANTTADFMS 383
>gb|EOX98014.1| Ribonuclease H protein [Theobroma cacao]
Length = 528
Score = 62.0 bits (149), Expect = 3e-07
Identities = 63/243 (25%), Positives = 98/243 (40%), Gaps = 3/243 (1%)
Frame = +1
Query: 151 VIAYVCWLIWKGRNSFIFEGKIKAHSTIFWQSIRMAKEYINTNNIYFCHGDEEKDLAACW 330
V CW +WK RN +F+ MA I + + E +
Sbjct: 187 VFRLACWYLWKWRNGVVFDVAFNPTRKRISMIKSMATATIAPSADFDGVQVERR------ 240
Query: 331 GLTSRPVAKKSNIYTSWQAMEKDCIYLNTDAAYDRKTLHAGLGAVLRDPDGR-PLLLASG 507
KK + W+A + + LNTD AY R A G V R+ +G +
Sbjct: 241 --------KKEEVLIEWRAPQVGWVCLNTDGAYKRSIEEASAGGVKRNAEGDWQAGFVAK 292
Query: 508 TGRVRNVLEAECXXXXXXXXXXXXXXPNQRIQIQTDSALLALFLNTNKPQPWYIQSSIKA 687
G+ + AE +++Q+Q D+ ++ ++T+K P I A
Sbjct: 293 LGKC-SAYRAELWGILHGLRLAWDSG-FKKVQVQVDNKMVVQAISTDKLIPGANTDLISA 350
Query: 688 IKSMLTPQDSVQ--HVYREANQVADFLSKTAMFELVEYSSLIPSLESCNMDLRSLLLADM 861
IK++L + V H YRE N VAD+L+ A ++E S ++ LE R LL+ DM
Sbjct: 351 IKNVLQKEWEVSFMHTYREGNMVADYLASYAF--VLEESYVV--LEQAPTGARKLLIYDM 406
Query: 862 YCT 870
T
Sbjct: 407 LGT 409
>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 668
Score = 62.0 bits (149), Expect = 3e-07
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 11/218 (5%)
Frame = +1
Query: 148 AVIAYVCWLIWKGRNSFIFEGKI----KAHSTIFWQSIRMAKEYINTNNIYFCHGDEEKD 315
A+ ++ W +WK R + + GK + I+ + +M K N +
Sbjct: 420 AMPIFIVWNLWKNRCACKYGGKSTNISRVKYAIYKDTFKMLKSAFPCINW-------PGN 472
Query: 316 LAACWGLTSRPVAKKSNIYTSWQAMEKDCIYLNTDAAYDRKTLHAGLGAVLRDPDGRPLL 495
AA R + T+W + I +NTD + T H G G ++RD +G+ +L
Sbjct: 473 WAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKIVL 532
Query: 496 -----LASGTGRVRNVLEAECXXXXXXXXXXXXXXPNQRIQIQTDSALLALFLNTNKPQP 660
L GT N EAE ++ I I+ DS L+ +++ +P
Sbjct: 533 AFATPLGDGT---NNKAEAEAALFGLSWALELG---HRNILIELDSQLVVQWISKKEPPH 586
Query: 661 WYIQSSIKAIKSML--TPQDSVQHVYREANQVADFLSK 768
W + + I+ I+ ++ T H++REAN VAD LSK
Sbjct: 587 WNVINQIERIQQLIMQTQNFKCNHIFREANWVADALSK 624
>gb|EOY02864.1| Ribonuclease H protein [Theobroma cacao]
Length = 660
Score = 61.6 bits (148), Expect = 4e-07
Identities = 63/243 (25%), Positives = 98/243 (40%), Gaps = 4/243 (1%)
Frame = +1
Query: 145 AAVIAYVCWLIWKGRNSFIFEGKIKAHSTIFWQSIRMAKEYINTNNIYFCHGDEEKDLAA 324
+ V CW +WK RN +F MA I T+ + E +
Sbjct: 427 SVVFGLACWCLWKWRNGVVFYAAFNPTRKRISMIKSMATATIATSADFDGVQVERR---- 482
Query: 325 CWGLTSRPVAKKSNIYTSWQAMEKDCIYLNTDAAYDRKTLHAGLGAVLRDPDG--RPLLL 498
KK + W+ + + LNTD AY R A G V+R+ +G + L
Sbjct: 483 ----------KKEEVLIGWRTPQVGWVCLNTDEAYKRSIEEASTGGVIRNAEGDWQAEFL 532
Query: 499 ASGTGRVRNVLEAECXXXXXXXXXXXXXXPNQRIQIQTDSALLALFLNTNKPQPWYIQSS 678
A G+ + AE +++Q+Q D+ ++ ++TNK P
Sbjct: 533 AK-LGKC-SAYRAELWGVLHGLRLAWDSG-FKKVQVQVDNKMVVPAVSTNKLIPGANTDL 589
Query: 679 IKAIKSMLTP--QDSVQHVYREANQVADFLSKTAMFELVEYSSLIPSLESCNMDLRSLLL 852
I+AIK +L + S H Y E N V D+L+ A ++E S ++ LE R LL+
Sbjct: 590 IRAIKDVLQKEWEVSFMHTYCEGNMVTDYLASYAF--VLEKSYIV--LEQAPTGARKLLM 645
Query: 853 ADM 861
DM
Sbjct: 646 YDM 648
>gb|EOX96783.1| Uncharacterized protein TCM_005954 [Theobroma cacao]
Length = 1134
Score = 60.5 bits (145), Expect = 8e-07
Identities = 48/210 (22%), Positives = 88/210 (41%), Gaps = 1/210 (0%)
Frame = +1
Query: 139 FRAAVIAYVCWLIWKGRNSFIFEGKIKAHSTIFWQSIRMAKEYINTNNIYFCHGDEEKDL 318
FR + ++CW +W RN + W++++ ++ + + + + D+
Sbjct: 889 FRVLLPLFICWFLWLERNDAKHRHTGLYPDRVIWRTMKHCRQLYDGSLLQQWQWKGDTDI 948
Query: 319 AACWGLTSRPVAKKSNIYTSWQAMEKDCIYLNTDAAYDRKTLHAGLGAVLRDPDGRPLLL 498
AA G + P S W+ LN D + R LHA G VLRD G+ +
Sbjct: 949 AAMLGFSFPPQQHASPQIIYWKKPSIGEYKLNVDGS-SRNGLHAATGGVLRDHTGKLIFG 1007
Query: 499 ASGTGRVRNVLEAECXXXXXXXXXXXXXXPNQRIQIQTDSALLALFLNTNKPQPWYIQSS 678
S N L+AE +++ I+ D+ + +K P+ I+
Sbjct: 1008 FSENIGPCNSLQAELRALLRGLLLCKERH-IEKLWIEMDALAAIQLIQPSKKGPYDIRYL 1066
Query: 679 IKAIKSMLTP-QDSVQHVYREANQVADFLS 765
+++I+ L+ + H +RE N+ AD+LS
Sbjct: 1067 LESIRMCLSSFSYRLSHTFREGNKAADYLS 1096
>ref|XP_004305134.1| PREDICTED: uncharacterized protein LOC101315365 [Fragaria vesca
subsp. vesca]
Length = 272
Score = 58.9 bits (141), Expect = 2e-06
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 12/216 (5%)
Frame = +1
Query: 154 IAYVCWLIWKGRNSFIFEGKIKAHSTIFWQSIRMAKEYINTNN---------IYFCHGDE 306
+A++ W IWK RN+F++E S I ++ A E+I N + H +
Sbjct: 15 VAFLLWEIWKARNAFVYEAATIDPSLIARKANLAAAEFITCKNHKVISNSMPVSHLHSRQ 74
Query: 307 EKDLAACWGLTSRPVAKK-SNIYTSWQAMEKDCIYLNTDAAYDRKTLHAGLGAVLRDPDG 483
+ G TS ++ SN+ W +N DAA+ + G+ A+ RD G
Sbjct: 75 SQSNHPNHGRTSISLSPTVSNVTEIWSPPPPGHFKINCDAAWIESSKLTGISALARDCHG 134
Query: 484 RPLLLASGTGRVRNVLEAECXXXXXXXXXXXXXXPNQRIQIQTDSALLALFLNTNKPQPW 663
A+ R +VLEAE P+ I AL+ N+ P W
Sbjct: 135 TLFDGATLLCRAGSVLEAEAAAAVVAIEVAKRLPPSPIILESDSKALVDQINNSKFPCNW 194
Query: 664 YIQSSIKAIKSMLT--PQDSVQHVYREANQVADFLS 765
I + I++ +T P+ + + R+AN AD ++
Sbjct: 195 KIAPVVTMIQNSITSNPRLAWFWISRKANSAADLVA 230
>gb|ABK28206.1| unknown [Arabidopsis thaliana]
Length = 293
Score = 58.9 bits (141), Expect = 2e-06
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Frame = +1
Query: 151 VIAYVCWLIWKGRNSFIFEGKIKAHSTIFWQSIRMAKEYINTNNIYFCHGDEEKDLAACW 330
++ ++ W +WK RN +F+GK + +++ +E+ +
Sbjct: 76 LVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELE-------------- 121
Query: 331 GLTSRPVAKKSNIYTSWQAMEKDCIYLNTDAAYDRKTLHAGLGAVLRDPDGRPLLL-ASG 507
G S P ++ N+ W+A + NTDA + + G+G +LR+ G L + A
Sbjct: 122 GKASGPQVER-NLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARA 180
Query: 508 TGRVRNVLEAECXXXXXXXXXXXXXXPNQRIQIQTDSALLALFLNTNKPQPWYIQSSIKA 687
R +NVLEAE +RI ++D+ L LN++ P +Q +++
Sbjct: 181 LPRTKNVLEAELEALRWAVLTMSRFN-YKRIIFESDAQALVNLLNSDDFWP-TLQPALED 238
Query: 688 IKSMLTPQDSVQHVY--REANQVADFLSKTAMFELVEYSSLIPSLES 822
I+ +L + V+ + R N+VAD +++ E + +S+ P L S
Sbjct: 239 IQQLLHHFEEVKFEFTPRGGNKVADRIAR----ESISFSNYDPKLFS 281
>ref|NP_180979.1| polynucleotidyl transferase, ribonuclease H-like superfamily
protein [Arabidopsis thaliana] gi|3337363|gb|AAC27408.1|
putative non-LTR retroelement reverse transcriptase
[Arabidopsis thaliana] gi|91805481|gb|ABE65469.1|
hypothetical protein At2g34320 [Arabidopsis thaliana]
gi|330253864|gb|AEC08958.1| polynucleotidyl transferase,
ribonuclease H-like superfamily protein [Arabidopsis
thaliana]
Length = 292
Score = 58.9 bits (141), Expect = 2e-06
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Frame = +1
Query: 151 VIAYVCWLIWKGRNSFIFEGKIKAHSTIFWQSIRMAKEYINTNNIYFCHGDEEKDLAACW 330
++ ++ W +WK RN +F+GK + +++ +E+ +
Sbjct: 76 LVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELE-------------- 121
Query: 331 GLTSRPVAKKSNIYTSWQAMEKDCIYLNTDAAYDRKTLHAGLGAVLRDPDGRPLLL-ASG 507
G S P ++ N+ W+A + NTDA + + G+G +LR+ G L + A
Sbjct: 122 GKASGPQVER-NLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARA 180
Query: 508 TGRVRNVLEAECXXXXXXXXXXXXXXPNQRIQIQTDSALLALFLNTNKPQPWYIQSSIKA 687
R +NVLEAE +RI ++D+ L LN++ P +Q +++
Sbjct: 181 LPRTKNVLEAELEALRWAVLTMSRFN-YKRIIFESDAQALVNLLNSDDFWP-TLQPALED 238
Query: 688 IKSMLTPQDSVQHVY--REANQVADFLSKTAMFELVEYSSLIPSLES 822
I+ +L + V+ + R N+VAD +++ E + +S+ P L S
Sbjct: 239 IQQLLHHFEEVKFEFTPRGGNKVADRIAR----ESISFSNYDPKLFS 281
>ref|XP_006289152.1| hypothetical protein CARUB_v10002590mg, partial [Capsella rubella]
gi|482557858|gb|EOA22050.1| hypothetical protein
CARUB_v10002590mg, partial [Capsella rubella]
Length = 254
Score = 58.5 bits (140), Expect = 3e-06
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 3/212 (1%)
Frame = +1
Query: 151 VIAYVCWLIWKGRNSFIFEGKIKAHSTIFWQSIRMAKEYINTNNIYFCHGDEEKDLAACW 330
V+ ++ W +WK RN FIF+GK +++ A+E+ D KD
Sbjct: 30 VVPWLLWRLWKSRNEFIFKGKDFDAQDTVRKALEDAEEWNQRKG-----QDALKD----- 79
Query: 331 GLTSRPVAKKSNIYTSWQAMEKDCIYLNTDAAYDRKTLHAGLGAVLRDPDGRPLLL-ASG 507
+P + SN W+ + + NTD A++ + +G+G VLR+ G L + A
Sbjct: 80 ---RQPTLRASN-EEKWRPPPRCWVKCNTDVAWNGEDTQSGMGWVLRNCSGEVLWMGAQA 135
Query: 508 TGRVRNVLEAECXXXXXXXXXXXXXXPNQRIQIQTDSALLALFLNTNKPQPWYIQSSIKA 687
R R+ LE E Q+I ++DS +L LN ++ P + I+
Sbjct: 136 LRRTRSALEVE-LEAIRWAVTSMLRLDFQKIIFESDSLVLVNLLNNDENWPAF-APLIQD 193
Query: 688 IKSMLTPQDSVQHVY--REANQVADFLSKTAM 777
IK L + + VY R N VAD ++K ++
Sbjct: 194 IKDSLPLLEDFKIVYTPRGCNGVADRVAKESL 225
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 57.8 bits (138), Expect = 5e-06
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 6/216 (2%)
Frame = +1
Query: 148 AVIAYVCWLIWKGRNSFIFEGKIKAHSTIFWQSIRMAKEYINTNNIYFCHGDEEKDLAAC 327
AV+A + W +WK RNS+ GK ++ +++Q + + + + K L
Sbjct: 597 AVLAVIMWELWKRRNSYR-HGKETTYNNMYYQCQLILYQLVTIKFPWI------KGLTYH 649
Query: 328 W----GLTSRPVAKKSNIYTSWQAMEKDCIYLNTDAAYDRKTLHAGLGAVLRDPDGRPLL 495
W G+ W+ + + NTD A + G +RD +G L
Sbjct: 650 WPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNTDGASKGNPRMSSYGYCIRDKNGDLLY 709
Query: 496 L-ASGTGRVRNVLEAECXXXXXXXXXXXXXXPNQRIQIQTDSALLALFLNTNKPQPWYIQ 672
A G N +EAE ++++++TDS L + + PW +
Sbjct: 710 AEAHNIGETTN-MEAEATTVWKALQFCYENGL-RKVRLETDSLALQNMITRSWKIPWELV 767
Query: 673 SSIKAIKSMLTPQD-SVQHVYREANQVADFLSKTAM 777
++ I ++ D V HVYRE NQ+ADF++ T +
Sbjct: 768 EKLEEIHEIMQQIDVQVCHVYREVNQLADFIANTTI 803
>gb|EOY02239.1| Uncharacterized protein TCM_016763 [Theobroma cacao]
Length = 2127
Score = 57.4 bits (137), Expect = 7e-06
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 3/212 (1%)
Frame = +1
Query: 139 FRAAVIAYVCWLIWKGRNSFIFEGKIKAHSTIFWQSIRMAKEYINTNNIYFCHGDEEKDL 318
FR + ++CW +W RN + W++++ ++ + + + + D+
Sbjct: 1885 FRVLLPLFICWFLWLERNDAKHRHTGLYADRVIWRTMKHCRQLYDGSLLQQWQWKGDTDI 1944
Query: 319 AACWG--LTSRPVAKKSNIYTSWQAMEKDCIYLNTDAAYDRKTLHAGLGAVLRDPDGRPL 492
A G T + A IY W+ LN D + R LHA G VLRD G+ +
Sbjct: 1945 ATMLGFSFTHKQHAPPQIIY--WKKPSIGEYKLNVDGS-SRNGLHAATGGVLRDHTGKLI 2001
Query: 493 LLASGTGRVRNVLEAECXXXXXXXXXXXXXXPNQRIQIQTDSALLALFLNTNKPQPWYIQ 672
S N L+AE +++ I+ D+ + + +K P+ ++
Sbjct: 2002 FGFSENIGPCNSLQAELRALLRGLLLCKERH-IEKLWIEMDALVAIQLIQPSKKGPYNLR 2060
Query: 673 SSIKAIKSMLTP-QDSVQHVYREANQVADFLS 765
+++I+ L+ + H+ RE NQ AD+LS
Sbjct: 2061 YLLESIRMCLSSFSYRLSHILREGNQAADYLS 2092
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 57.4 bits (137), Expect = 7e-06
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 7/210 (3%)
Frame = +1
Query: 160 YVCWLIWKGRNSFIFEGKIKAHSTIFWQSIRMAKEYINTNNIYFCHGDEEKDLAACWGLT 339
++CW +WK R + + K +S+I+ + K + I F + +
Sbjct: 1207 FICWNLWKNRCAVKYGLK---NSSIYRVQYGIFKNIMQVITIVFPSIPWQTSWNNLINIV 1263
Query: 340 SRPVAKKSNIYTSWQAMEKDCIYLNTDAAYDRKTLHAGLGAVLRDPDGRPLLLAS----- 504
+ + W + LNTD + + + G G +LRD G+ + S
Sbjct: 1264 EQCKQHYKILIVKWNKPDLGKYKLNTDGSALQNSGKIGGGGILRDNQGKIIYAFSLPFGF 1323
Query: 505 GTGRVRNVLEAECXXXXXXXXXXXXXXPNQRIQIQTDSALLALFLNTNKPQPWYIQSSIK 684
GT + A ++I+++ DS LL ++N+N PW + I+
Sbjct: 1324 GTNNFAEIKAA------LHGLDWCEQHGYKKIELEVDSKLLCNWINSNINIPWRYEELIQ 1377
Query: 685 AIKSMLTPQDSVQ--HVYREANQVADFLSK 768
I ++ D Q H+YREAN AD LSK
Sbjct: 1378 QIHQIIRKMDQFQCHHIYREANCTADLLSK 1407