BLASTX nr result
ID: Stemona21_contig00022272
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00022272
(483 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004960540.1| PREDICTED: uncharacterized protein LOC101780... 126 3e-27
ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group] g... 124 1e-26
gb|AFW75001.1| REX1 DNA Repair family protein [Zea mays] 124 1e-26
gb|AFW74999.1| REX1 DNA Repair family protein, partial [Zea mays] 124 1e-26
ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like ... 124 1e-26
gb|EEC78671.1| hypothetical protein OsI_18797 [Oryza sativa Indi... 123 3e-26
ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|5... 122 5e-26
ref|NP_001148022.1| REX1 DNA Repair family protein [Zea mays] gi... 122 5e-26
ref|XP_002439126.1| hypothetical protein SORBIDRAFT_09g000940 [S... 122 6e-26
ref|XP_002266482.1| PREDICTED: general transcription factor IIH ... 121 8e-26
ref|XP_002440981.1| hypothetical protein SORBIDRAFT_09g018330 [S... 121 1e-25
ref|XP_006477302.1| PREDICTED: general transcription factor IIH ... 120 2e-25
ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arab... 120 2e-25
gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana] 120 2e-25
ref|NP_172702.1| nucleotide excision repair, TFIIH, subunit TTDA... 120 2e-25
ref|XP_006417239.1| hypothetical protein EUTSA_v10009271mg [Eutr... 119 3e-25
gb|EMJ12143.1| hypothetical protein PRUPE_ppa024121mg [Prunus pe... 118 7e-25
gb|EOY24508.1| Nucleotide excision repair, TFIIH, subunit TTDA i... 118 9e-25
dbj|BAK07005.1| predicted protein [Hordeum vulgare subsp. vulgare] 115 8e-24
ref|XP_004962293.1| PREDICTED: uncharacterized protein LOC101758... 114 1e-23
>ref|XP_004960540.1| PREDICTED: uncharacterized protein LOC101780092 [Setaria italica]
Length = 70
Score = 126 bits (316), Expect = 3e-27
Identities = 58/69 (84%), Positives = 65/69 (94%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNAIKGL ISCD+PMAQFI++LNAS+PPS+RFI+H+LD THMFVQPHV EMIRSKI EF
Sbjct: 1 MVNAIKGLFISCDIPMAQFIINLNASMPPSERFIVHMLDPTHMFVQPHVAEMIRSKIGEF 60
Query: 236 RDQNSYEKP 210
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group]
gi|34393555|dbj|BAC83153.1| unknown protein [Oryza
sativa Japonica Group] gi|113611604|dbj|BAF21982.1|
Os07g0573600 [Oryza sativa Japonica Group]
gi|215707252|dbj|BAG93712.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218199880|gb|EEC82307.1| hypothetical protein
OsI_26568 [Oryza sativa Indica Group]
gi|222637319|gb|EEE67451.1| hypothetical protein
OsJ_24828 [Oryza sativa Japonica Group]
Length = 131
Score = 124 bits (312), Expect = 1e-26
Identities = 60/69 (86%), Positives = 64/69 (92%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNAIKGL ISCDVPMAQFIV+LNAS+P S +FILH+LD THMFVQPHV EMIRSKISEF
Sbjct: 62 MVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRSKISEF 121
Query: 236 RDQNSYEKP 210
RDQNSYEKP
Sbjct: 122 RDQNSYEKP 130
>gb|AFW75001.1| REX1 DNA Repair family protein [Zea mays]
Length = 154
Score = 124 bits (311), Expect = 1e-26
Identities = 59/70 (84%), Positives = 65/70 (92%)
Frame = -2
Query: 419 KMVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISE 240
KMVNAIKGL ISCDVPMAQFIV+LNAS+PPS+RFI+H+LD T+MFVQPHV MIRSKI E
Sbjct: 84 KMVNAIKGLFISCDVPMAQFIVNLNASMPPSERFIVHMLDPTNMFVQPHVAHMIRSKIGE 143
Query: 239 FRDQNSYEKP 210
FRDQNSYEKP
Sbjct: 144 FRDQNSYEKP 153
>gb|AFW74999.1| REX1 DNA Repair family protein, partial [Zea mays]
Length = 132
Score = 124 bits (311), Expect = 1e-26
Identities = 59/70 (84%), Positives = 65/70 (92%)
Frame = -2
Query: 419 KMVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISE 240
KMVNAIKGL ISCDVPMAQFIV+LNAS+PPS+RFI+H+LD T+MFVQPHV MIRSKI E
Sbjct: 62 KMVNAIKGLFISCDVPMAQFIVNLNASMPPSERFIVHMLDPTNMFVQPHVAHMIRSKIGE 121
Query: 239 FRDQNSYEKP 210
FRDQNSYEKP
Sbjct: 122 FRDQNSYEKP 131
>ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
distachyon]
Length = 457
Score = 124 bits (311), Expect = 1e-26
Identities = 63/90 (70%), Positives = 72/90 (80%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNAIKGL ISCDVPMAQFIV+LNAS+P S++FI+H+LD THMFVQPHV EMIRSKI+EF
Sbjct: 1 MVNAIKGLFISCDVPMAQFIVNLNASMPASEKFIVHMLDPTHMFVQPHVGEMIRSKIAEF 60
Query: 236 RDQNSYEKPA*IITSNELLPSPRGITSGCI 147
RDQNSYEKP I + IT+ CI
Sbjct: 61 RDQNSYEKPTSIAQTE--------ITNTCI 82
>gb|EEC78671.1| hypothetical protein OsI_18797 [Oryza sativa Indica Group]
gi|222630525|gb|EEE62657.1| hypothetical protein
OsJ_17460 [Oryza sativa Japonica Group]
Length = 81
Score = 123 bits (308), Expect = 3e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNAIKGL ISCDVPMAQFIV+LNAS+P S +FILH+LD THMFVQPHV EMIR KISEF
Sbjct: 12 MVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRGKISEF 71
Query: 236 RDQNSYEKP 210
RDQNSYEKP
Sbjct: 72 RDQNSYEKP 80
>ref|XP_002329886.1| predicted protein [Populus trichocarpa]
gi|566147873|ref|XP_006368720.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|566147875|ref|XP_006368721.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|566147877|ref|XP_006368722.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346807|gb|ERP65289.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346808|gb|ERP65290.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346809|gb|ERP65291.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
Length = 70
Score = 122 bits (306), Expect = 5e-26
Identities = 56/70 (80%), Positives = 66/70 (94%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNA KGL ISCD+PMAQFI++LNASLP SQ+FI+HILDSTHMFVQPHV++MIRS IS+F
Sbjct: 1 MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDF 60
Query: 236 RDQNSYEKPA 207
R+QNSYEKP+
Sbjct: 61 REQNSYEKPS 70
>ref|NP_001148022.1| REX1 DNA Repair family protein [Zea mays]
gi|195615234|gb|ACG29447.1| REX1 DNA Repair family
protein [Zea mays] gi|195628074|gb|ACG35867.1| REX1 DNA
Repair family protein [Zea mays]
gi|195639980|gb|ACG39458.1| REX1 DNA Repair family
protein [Zea mays] gi|413942353|gb|AFW75002.1| REX1 DNA
Repair family protein [Zea mays]
Length = 70
Score = 122 bits (306), Expect = 5e-26
Identities = 58/69 (84%), Positives = 64/69 (92%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNAIKGL ISCDVPMAQFIV+LNAS+PPS+RFI+H+LD T+MFVQPHV MIRSKI EF
Sbjct: 1 MVNAIKGLFISCDVPMAQFIVNLNASMPPSERFIVHMLDPTNMFVQPHVAHMIRSKIGEF 60
Query: 236 RDQNSYEKP 210
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_002439126.1| hypothetical protein SORBIDRAFT_09g000940 [Sorghum bicolor]
gi|241944411|gb|EES17556.1| hypothetical protein
SORBIDRAFT_09g000940 [Sorghum bicolor]
Length = 70
Score = 122 bits (305), Expect = 6e-26
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNAIKGL ISCD+PMAQFIV+LNAS+PPS+RFI+H+LD T+MFVQPHV MIRSKI EF
Sbjct: 1 MVNAIKGLFISCDIPMAQFIVNLNASMPPSERFIVHMLDPTNMFVQPHVAHMIRSKIGEF 60
Query: 236 RDQNSYEKP 210
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
product [Vitis vinifera]
Length = 70
Score = 121 bits (304), Expect = 8e-26
Identities = 55/70 (78%), Positives = 65/70 (92%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNA KGL ISCD+PMAQFI+++NAS+P SQ+FI+H+LDSTH+FVQPHV EMIRS ISEF
Sbjct: 1 MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEF 60
Query: 236 RDQNSYEKPA 207
R+QNSYEKPA
Sbjct: 61 REQNSYEKPA 70
>ref|XP_002440981.1| hypothetical protein SORBIDRAFT_09g018330 [Sorghum bicolor]
gi|241946266|gb|EES19411.1| hypothetical protein
SORBIDRAFT_09g018330 [Sorghum bicolor]
Length = 70
Score = 121 bits (303), Expect = 1e-25
Identities = 58/69 (84%), Positives = 64/69 (92%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNAIKGL ISCDVPMAQFIV+LNAS+P S+RFI+H+LD THMFVQPHV EMIRSKI+EF
Sbjct: 1 MVNAIKGLFISCDVPMAQFIVNLNASMPASERFIVHMLDPTHMFVQPHVAEMIRSKIAEF 60
Query: 236 RDQNSYEKP 210
DQNSYEKP
Sbjct: 61 WDQNSYEKP 69
>ref|XP_006477302.1| PREDICTED: general transcription factor IIH subunit 5-like isoform
X1 [Citrus sinensis] gi|568846947|ref|XP_006477303.1|
PREDICTED: general transcription factor IIH subunit
5-like isoform X2 [Citrus sinensis]
gi|568846949|ref|XP_006477304.1| PREDICTED: general
transcription factor IIH subunit 5-like isoform X3
[Citrus sinensis]
Length = 70
Score = 120 bits (301), Expect = 2e-25
Identities = 55/70 (78%), Positives = 66/70 (94%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNAIKGL ISCD+PMAQFI+++NAS+P SQ+FI+HILDSTH+FVQP++ EMIRS I+EF
Sbjct: 1 MVNAIKGLFISCDIPMAQFIINMNASMPQSQKFIIHILDSTHLFVQPNMAEMIRSAIAEF 60
Query: 236 RDQNSYEKPA 207
RDQNSYEKPA
Sbjct: 61 RDQNSYEKPA 70
>ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arabidopsis lyrata subsp.
lyrata] gi|297335775|gb|EFH66192.1| hypothetical protein
ARALYDRAFT_471390 [Arabidopsis lyrata subsp. lyrata]
Length = 71
Score = 120 bits (301), Expect = 2e-25
Identities = 53/69 (76%), Positives = 64/69 (92%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNAIKG+ ISCD+PM QFIV++N S+PPSQ+FI+H+LDSTH+FVQPHV +MIRS IS+F
Sbjct: 1 MVNAIKGVFISCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDF 60
Query: 236 RDQNSYEKP 210
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]
Length = 113
Score = 120 bits (300), Expect = 2e-25
Identities = 52/69 (75%), Positives = 64/69 (92%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNAIKG+ +SCD+PM QFIV++N S+PPSQ+FI+H+LDSTH+FVQPHV +MIRS IS+F
Sbjct: 43 MVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDF 102
Query: 236 RDQNSYEKP 210
RDQNSYEKP
Sbjct: 103 RDQNSYEKP 111
>ref|NP_172702.1| nucleotide excision repair, TFIIH, subunit TTDA [Arabidopsis
thaliana] gi|38566546|gb|AAR24163.1| At1g12400
[Arabidopsis thaliana] gi|40823747|gb|AAR92302.1|
At1g12400 [Arabidopsis thaliana]
gi|332190754|gb|AEE28875.1| nucleotide excision repair,
TFIIH, subunit TTDA [Arabidopsis thaliana]
Length = 71
Score = 120 bits (300), Expect = 2e-25
Identities = 52/69 (75%), Positives = 64/69 (92%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNAIKG+ +SCD+PM QFIV++N S+PPSQ+FI+H+LDSTH+FVQPHV +MIRS IS+F
Sbjct: 1 MVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDF 60
Query: 236 RDQNSYEKP 210
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_006417239.1| hypothetical protein EUTSA_v10009271mg [Eutrema salsugineum]
gi|557095010|gb|ESQ35592.1| hypothetical protein
EUTSA_v10009271mg [Eutrema salsugineum]
Length = 70
Score = 119 bits (299), Expect = 3e-25
Identities = 53/69 (76%), Positives = 64/69 (92%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNAIKG+ ISCD+PMAQFIV++N+S+P SQ+FI+H+LD TH+FVQPHV +MIRS ISEF
Sbjct: 1 MVNAIKGVFISCDIPMAQFIVNMNSSMPSSQKFIIHVLDGTHLFVQPHVEQMIRSTISEF 60
Query: 236 RDQNSYEKP 210
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>gb|EMJ12143.1| hypothetical protein PRUPE_ppa024121mg [Prunus persica]
gi|462406895|gb|EMJ12359.1| hypothetical protein
PRUPE_ppb011951mg [Prunus persica]
Length = 70
Score = 118 bits (296), Expect = 7e-25
Identities = 53/69 (76%), Positives = 62/69 (89%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNA KGL +SCD+PMAQFI++ N +LPPSQ+FI+H+LDSTH+FVQPH EMIRS ISEF
Sbjct: 1 MVNATKGLFVSCDIPMAQFIINYNNTLPPSQQFIIHVLDSTHLFVQPHAAEMIRSAISEF 60
Query: 236 RDQNSYEKP 210
RDQNSYEKP
Sbjct: 61 RDQNSYEKP 69
>gb|EOY24508.1| Nucleotide excision repair, TFIIH, subunit TTDA isoform 1
[Theobroma cacao] gi|508777253|gb|EOY24509.1| Nucleotide
excision repair, TFIIH, subunit TTDA isoform 1
[Theobroma cacao]
Length = 70
Score = 118 bits (295), Expect = 9e-25
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNA KGL ISCD+PMAQFIV+LNAS+P SQ+FI+H+LD+TH FVQPH EMIRS ISEF
Sbjct: 1 MVNATKGLFISCDIPMAQFIVNLNASMPASQKFIIHVLDNTHFFVQPHAAEMIRSAISEF 60
Query: 236 RDQNSYEKP 210
RDQNSY+KP
Sbjct: 61 RDQNSYDKP 69
>dbj|BAK07005.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 71
Score = 115 bits (287), Expect = 8e-24
Identities = 51/70 (72%), Positives = 64/70 (91%)
Frame = -2
Query: 419 KMVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISE 240
KMVNAIKGL ISCD+PMAQFIV++NAS+P S +FI+HILD THMF+QP++ + I+SK++E
Sbjct: 1 KMVNAIKGLFISCDIPMAQFIVNMNASMPASDKFIVHILDPTHMFIQPNMGDYIKSKMAE 60
Query: 239 FRDQNSYEKP 210
FRDQNSYEKP
Sbjct: 61 FRDQNSYEKP 70
>ref|XP_004962293.1| PREDICTED: uncharacterized protein LOC101758633 isoform X1 [Setaria
italica] gi|514751214|ref|XP_004962294.1| PREDICTED:
uncharacterized protein LOC101758633 isoform X2 [Setaria
italica]
Length = 70
Score = 114 bits (286), Expect = 1e-23
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = -2
Query: 416 MVNAIKGLLISCDVPMAQFIVSLNASLPPSQRFILHILDSTHMFVQPHVNEMIRSKISEF 237
MVNAIK L ISCD+PMAQFIV+LNAS+P +RFI+H+LD THMFV PHV EMIRSKI+EF
Sbjct: 1 MVNAIKWLFISCDIPMAQFIVNLNASMPALERFIVHMLDPTHMFVHPHVAEMIRSKIAEF 60
Query: 236 RDQNSYEKP 210
R+QNSYEKP
Sbjct: 61 RNQNSYEKP 69