BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00020442
         (807 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614...   192   1e-46
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607...   190   4e-46
ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608...   188   2e-45
ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626...   185   2e-44
ref|XP_006828672.1| hypothetical protein AMTR_s04653p00000520, p...   184   3e-44
ref|XP_006494926.1| PREDICTED: uncharacterized protein LOC102618...   176   7e-42
ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617...   176   9e-42
ref|XP_006484870.1| PREDICTED: uncharacterized protein LOC102608...   172   1e-40
ref|XP_006480303.1| PREDICTED: uncharacterized protein LOC102610...   157   4e-36
gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subc...   156   7e-36
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...   154   5e-35
dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]                   154   5e-35
gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...   153   6e-35
gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi...   153   6e-35
gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|43780...   152   1e-34
ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623...   149   1e-33
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]               145   2e-32
emb|CAD40452.2| OSJNBa0041M21.10 [Oryza sativa Japonica Group] g...   145   2e-32
emb|CAH66268.1| OSIGBa0136B09.4 [Oryza sativa Indica Group]           145   2e-32
ref|XP_005315177.1| PREDICTED: uncharacterized protein LOC101933...   142   1e-31

>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
          Length = 1089

 Score =  192 bits (488), Expect = 1e-46
 Identities = 108/271 (39%), Positives = 167/271 (61%), Gaps = 4/271 (1%)
 Frame = +3

Query: 6    SQKAYVRRAARPGE-MLSLGAPRKVRKTDDVISFSEEDARDLHHPHDDALVVSLTISNFE 182
            ++K Y R A    E +L+L A +K R     I ++E+D   + +PH+DALV+   +++ E
Sbjct: 413  ARKNYGRYAMTGREVLLNLPAAKKARVRQVPIMWTEDDEEGILYPHEDALVIKALVASTE 472

Query: 183  VYRMLIDGGSSADLLYLPAFEGMCIDRTQLRPVSNPLIGFSGERTRPLGAITLPLTAGAP 362
            + R+L+D GSS D+L+  A + M I   +L   +  L GF G R  P+G I LP+T G  
Sbjct: 473  LRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGFGGGRLTPMGVIELPITVGTK 532

Query: 363  PKQRTIMVEFLVIDCPSTYNGIIGRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGSQRQA 542
            P +RT+M++F+V++  S Y  I+GRP +   + V ST++L +++  +  VG V+G QR A
Sbjct: 533  PFERTMMLDFVVVEERSPYQMILGRPFMRISQCVMSTHYLALKYRINGVVGVVKGDQRMA 592

Query: 543  RECYATGLRERAGKVLQVEE-DGRDPPRQGGL-PAEQLKEVPISK-DPKQVVKIGSQLEP 713
            R CYAT  +E     LQV   D R   + G   P E+L+EV IS+ DP +VVK+GS+L  
Sbjct: 593  RSCYATAAKE----TLQVTSLDNRGDSKNGRQEPVEKLEEVVISRSDPSRVVKVGSELGE 648

Query: 714  KEEEDIIRCLRRNADLMAWSHSDMPGIDPSV 806
              + ++++CL+ +AD+ AWSH DMPGID  +
Sbjct: 649  AIKAELVKCLQSHADVFAWSHEDMPGIDRGI 679


>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
          Length = 1866

 Score =  190 bits (483), Expect = 4e-46
 Identities = 106/271 (39%), Positives = 166/271 (61%), Gaps = 4/271 (1%)
 Frame = +3

Query: 6    SQKAYVRRAARPGEML-SLGAPRKVRKTDDVISFSEEDARDLHHPHDDALVVSLTISNFE 182
            ++K Y R A    E+L +L A ++ +     I ++E D   + +PH+DALV+   +++ E
Sbjct: 580  ARKNYGRYALTSKEVLFNLPAAKRAKVRQVPIMWTENDEEGILYPHEDALVIKALVASTE 639

Query: 183  VYRMLIDGGSSADLLYLPAFEGMCIDRTQLRPVSNPLIGFSGERTRPLGAITLPLTAGAP 362
            + R+L+D GSS D+L+  A + M I   +L   +  L GF G R  P+G I LP+T G  
Sbjct: 640  LRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGFGGGRLTPMGVIELPITVGTK 699

Query: 363  PKQRTIMVEFLVIDCPSTYNGIIGRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGSQRQA 542
            P +RT+M++F+V++  S Y  I+GRP +   + V ST++L +++  +  VG V+G QR A
Sbjct: 700  PFERTMMLDFVVVEERSPYQMILGRPFMRISQCVISTHYLALKYRINGVVGVVKGDQRMA 759

Query: 543  RECYATGLRERAGKVLQVEE-DGRDPPRQGGL-PAEQLKEVPISK-DPKQVVKIGSQLEP 713
            R CYAT  +E     LQV   D R   + G   P E+LKEV +S+ DP +VVK+GS+L  
Sbjct: 760  RSCYATAAKE----TLQVTSLDNRGDSKNGRQEPVEKLKEVVVSRSDPSKVVKVGSELGE 815

Query: 714  KEEEDIIRCLRRNADLMAWSHSDMPGIDPSV 806
              + ++++CL+ +AD+ AWSH DMPGID  +
Sbjct: 816  AIKGELVKCLQSHADIFAWSHEDMPGIDRGI 846


>ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608416 [Citrus sinensis]
          Length = 1313

 Score =  188 bits (478), Expect = 2e-45
 Identities = 104/268 (38%), Positives = 167/268 (62%), Gaps = 4/268 (1%)
 Frame = +3

Query: 6    SQKAYVRRAARPGEML-SLGAPRKVRKTDDVISFSEEDARDLHHPHDDALVVSLTISNFE 182
            ++K Y R A    E+L +L A ++ +     I ++E++   + +PH+DALV+   +++ E
Sbjct: 425  ARKNYGRYALTSKEVLFNLPAAKRAKVRQVPIMWTEDEEEGILYPHEDALVIKALVASTE 484

Query: 183  VYRMLIDGGSSADLLYLPAFEGMCIDRTQLRPVSNPLIGFSGERTRPLGAITLPLTAGAP 362
            + R+L+D GSS D+L+  A + M I   +L   +  L GF G R  P+G I LP+T G  
Sbjct: 485  LRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGFGGGRLTPMGVIELPITVGTK 544

Query: 363  PKQRTIMVEFLVIDCPSTYNGIIGRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGSQRQA 542
            P +RT+M++F+V++  S Y  I+GRP +   + V ST++L +++  +  VG V+G QR A
Sbjct: 545  PFERTMMLDFVVVEERSPYQMILGRPFMRISQCVMSTHYLALKYRINGVVGVVKGDQRMA 604

Query: 543  RECYATGLRERAGKVLQVEE-DGRDPPRQGGL-PAEQLKEVPISK-DPKQVVKIGSQLEP 713
            R CYAT  +E     LQV   D R   + G   P E+L+EV +S+ DP +VVK+GS+L  
Sbjct: 605  RSCYATAAKE----TLQVTSLDNRGDSKNGRQEPVEKLEEVVVSRSDPSRVVKVGSELGR 660

Query: 714  KEEEDIIRCLRRNADLMAWSHSDMPGID 797
            + + ++++CL+ +AD+ AWSH DMPGID
Sbjct: 661  EIKTELVKCLQSHADIFAWSHEDMPGID 688


>ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626228 [Citrus sinensis]
          Length = 1189

 Score =  185 bits (469), Expect = 2e-44
 Identities = 103/271 (38%), Positives = 168/271 (61%), Gaps = 4/271 (1%)
 Frame = +3

Query: 6    SQKAYVRRAARPGEML-SLGAPRKVRKTDDVISFSEEDARDLHHPHDDALVVSLTISNFE 182
            S+K Y R A    E+L S  A ++ R     I +++ED   + +PH+DALV+  T+++ E
Sbjct: 515  SRKNYARYAMTSKEVLFSTPAAKRARVRQVPIMWTDEDEEGILYPHEDALVIKATVASKE 574

Query: 183  VYRMLIDGGSSADLLYLPAFEGMCIDRTQLRPVSNPLIGFSGERTRPLGAITLPLTAGAP 362
              R+LID GSS D+L+    E M I   +L   +  L GF G +  PLG + LP+T G+ 
Sbjct: 575  FDRILIDTGSSVDVLFKSTLEEMGIADRKLEYTNTSLKGFGGGKLVPLGVVELPITIGSS 634

Query: 363  PKQRTIMVEFLVIDCPSTYNGIIGRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGSQRQA 542
            P +RT++++F+V+D    Y  I+GRP L   +AV S ++L +++  +  VG VRG QR A
Sbjct: 635  PTERTMILDFVVVDEEGPYQMILGRPFLRMSKAVLSNHYLALKYRVNGIVGVVRGGQRIA 694

Query: 543  RECYATGLRERAGKVLQVEE-DGRDPPRQGGL-PAEQLKEVPIS-KDPKQVVKIGSQLEP 713
            R CY++ +RE     +Q+   D R   ++G   P E L+ V +  ++P + ++IGS+LE 
Sbjct: 695  RGCYSSAVRE----AMQITSLDTRVENKKGRQEPVEDLETVSLGPENPGKTIRIGSRLEG 750

Query: 714  KEEEDIIRCLRRNADLMAWSHSDMPGIDPSV 806
            ++++++++CL+ +AD+ AW+H DMPGIDP V
Sbjct: 751  EQKQELVKCLQAHADVFAWTHEDMPGIDPEV 781


>ref|XP_006828672.1| hypothetical protein AMTR_s04653p00000520, partial [Amborella
            trichopoda] gi|548833479|gb|ERM96088.1| hypothetical
            protein AMTR_s04653p00000520, partial [Amborella
            trichopoda]
          Length = 563

 Score =  184 bits (467), Expect = 3e-44
 Identities = 116/299 (38%), Positives = 158/299 (52%), Gaps = 32/299 (10%)
 Frame = +3

Query: 6    SQKAYVRRAARPG--EMLSLGA-PRKV--RKTDDVISFSEEDARDLHHPHDDALVVSLTI 170
            SQ+ Y R A       + +LG  P K+  R+ +D++ F E DAR +HHPH DALV+   I
Sbjct: 223  SQERYAREAKEKPLTNVNNLGERPEKLFKRECEDIV-FMESDARWVHHPHSDALVIVANI 281

Query: 171  SNFEVYRMLIDGGSSADLLYLPAFEGMCIDRTQLRPVSNPLIGFSGERTRPLGAITLPLT 350
                V+R+L+D GSS +LL   AF+ M +    LRP+++ + GF+G+     G I LP+T
Sbjct: 282  GGDNVHRILVDNGSSVNLLNFQAFKQMGLQEKDLRPMTSSIYGFTGDVIAIKGMIKLPIT 341

Query: 351  AGAPPKQRTIMVEFLVIDCPSTYNGIIGRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGS 530
             G  P     M +F VID  S YN +IGRP L +++ V S YHL M+FPT  GVG VRG 
Sbjct: 342  LGTAPITAKSMADFAVIDQYSAYNAVIGRPILKEMKIVTSIYHLTMKFPTPSGVGSVRGV 401

Query: 531  QRQARECYATGLRERAGK-------VLQVEEDGRDPPRQGGL------------------ 635
            Q  +RECY   ++ R  K         +      DP  +GG                   
Sbjct: 402  QSDSRECYNAAVKARRKKDGECYPPFGRTTTSPGDPQDRGGTALDKPDLDPRILDHTAAA 461

Query: 636  -PAEQLKEVPISK-DPKQVVKIGSQLEPKEEEDIIRCLRRNADLMAWSHSDMPGIDPSV 806
              AE   EVPI   D  +V+KIGS+L  +  E +   L++N D+ AW HSDM GI P V
Sbjct: 462  QAAEDTIEVPIDPIDNNKVLKIGSRLNIQLREQLTTFLKQNLDIFAWKHSDMVGISPQV 520


>ref|XP_006494926.1| PREDICTED: uncharacterized protein LOC102618417 [Citrus sinensis]
          Length = 776

 Score =  176 bits (447), Expect = 7e-42
 Identities = 101/271 (37%), Positives = 163/271 (60%), Gaps = 4/271 (1%)
 Frame = +3

Query: 6    SQKAYVRRAARPGEML-SLGAPRKVRKTDDVISFSEEDARDLHHPHDDALVVSLTISNFE 182
            S+K Y R A    E+L +  A ++ R     I +++ED + + +PH+DALV+  T+++ +
Sbjct: 441  SRKNYARYAMTSKEILFNTPAAKRARVRRVPIMWTDEDKKWVLYPHEDALVIKATVASKK 500

Query: 183  VYRMLIDGGSSADLLYLPAFEGMCIDRTQLRPVSNPLIGFSGERTRPLGAITLPLTAGAP 362
              R+LID GSS D+L+    E M I   +L   +  L GF G +  PLG + LP+T G+ 
Sbjct: 501  FDRILIDTGSSVDVLFKSTLEEMGIADRKLEYTNTSLKGFGGGKLVPLGVVELPITIGSS 560

Query: 363  PKQRTIMVEFLVIDCPSTYNGIIGRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGSQRQA 542
            P +RTIM++F+V+D    Y  I+GRP L   +AV S ++L +++  +  VG VRG QR A
Sbjct: 561  PTERTIMLDFVVVDEEGPYQMILGRPFLRMSKAVLSNHYLALKYWVNGVVGVVRGDQRIA 620

Query: 543  RECYATGLRERAGKVLQVEE-DGRDPPRQGGL-PAEQLKEVPISKDPK-QVVKIGSQLEP 713
            R CY+   RE     +Q+   D R   + G   P E L+ V +  + + + ++IGS+L+ 
Sbjct: 621  RSCYSLAARE----AMQITSLDTRVENKNGRQEPVEDLETVSLGPENRGKTIRIGSRLKG 676

Query: 714  KEEEDIIRCLRRNADLMAWSHSDMPGIDPSV 806
            + + ++++CL+ +AD+ AW+H DMPGIDP V
Sbjct: 677  ERKHELVKCLQAHADVFAWTHEDMPGIDPEV 707


>ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617447 [Citrus sinensis]
          Length = 1100

 Score =  176 bits (446), Expect = 9e-42
 Identities = 103/271 (38%), Positives = 160/271 (59%), Gaps = 4/271 (1%)
 Frame = +3

Query: 6    SQKAYVRRAARPGEML-SLGAPRKVRKTDDVISFSEEDARDLHHPHDDALVVSLTISNFE 182
            ++K Y R A    E+L +L A  K +     I ++++D   + +PH+DALV+   ++  E
Sbjct: 279  ARKNYGRYAMTSKEVLFNLPAAEKAKMRQVPIMWTDDDEEGILYPHEDALVIKAMVAGTE 338

Query: 183  VYRMLIDGGSSADLLYLPAFEGMCIDRTQLRPVSNPLIGFSGERTRPLGAITLPLTAGAP 362
            + R+LI+ GSS D+++    + M I   +L   +  L GF G R  P+G I LP+T G  
Sbjct: 339  LRRILIEMGSSVDIVFKSTLDDMGIADLKLERTNTSLKGFGGGRLTPIGIIELPITVGTK 398

Query: 363  PKQRTIMVEFLVIDCPSTYNGIIGRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGSQRQA 542
            P +RT+M++F+V++  S Y  I+GRP +   + V ST++L +++  +  VG V+G QR A
Sbjct: 399  PFERTMMLDFVVVEERSPYEIILGRPFMRISQCVVSTHYLPLKYRVNGVVGVVKGDQRMA 458

Query: 543  RECYATGLRERAGKVLQVEE-DGRDPPRQGGL-PAEQLKEVPISK-DPKQVVKIGSQLEP 713
            R CYAT  +E     LQV   D R   ++G   P E+L+EV +SK +P +VVKIGS L  
Sbjct: 459  RSCYATAAKE----TLQVTSLDNRGDSKKGRQEPVEKLEEVAVSKSNPSRVVKIGSGLVG 514

Query: 714  KEEEDIIRCLRRNADLMAWSHSDMPGIDPSV 806
                 +++CL+  AD+ AWSH D PGI+  V
Sbjct: 515  AVRGKLVKCLQSRADIFAWSHEDTPGINRGV 545


>ref|XP_006484870.1| PREDICTED: uncharacterized protein LOC102608935, partial [Citrus
           sinensis]
          Length = 301

 Score =  172 bits (437), Expect = 1e-40
 Identities = 89/238 (37%), Positives = 152/238 (63%), Gaps = 3/238 (1%)
 Frame = +3

Query: 102 FSEEDARDLHHPHDDALVVSLTISNFEVYRMLIDGGSSADLLYLPAFEGMCIDRTQLRPV 281
           ++++D   + +PH+DALV+  T+++ +  R+LI+ GSS D+L+    E M I   +L  +
Sbjct: 2   WTDDDEEGILYPHEDALVIKATVASKKFDRILINTGSSVDVLFKSTLEEMGIADRKLEYI 61

Query: 282 SNPLIGFSGERTRPLGAITLPLTAGAPPKQRTIMVEFLVIDCPSTYNGIIGRPTLNKLRA 461
           +  L GF G +  PLG + LP+T G+ P +RT++++F+V+D    Y  I+GRP L   +A
Sbjct: 62  NTSLKGFGGGKLVPLGVVELPITIGSSPTERTMILDFVVVDEEGPYQMILGRPFLRMSKA 121

Query: 462 VASTYHLIMRFPTDHGVGEVRGSQRQARECYATGLRERAGKVLQVEE-DGRDPPRQGGL- 635
           V S ++L +++  +  VG VRG QR AR CY++  RE     +Q+   D R   ++G   
Sbjct: 122 VLSNHYLALKYRVNGVVGVVRGDQRIARSCYSSAARE----AMQITSLDTRVENKKGRQE 177

Query: 636 PAEQLKEVPIS-KDPKQVVKIGSQLEPKEEEDIIRCLRRNADLMAWSHSDMPGIDPSV 806
           P E L+ V +  ++P + ++IGS+L+ K+++++++CL  +AD+ AW+H DMPGIDP V
Sbjct: 178 PVEDLETVSLGPENPGKTIRIGSRLKGKQKQELVKCLEAHADVFAWTHEDMPGIDPEV 235


>ref|XP_006480303.1| PREDICTED: uncharacterized protein LOC102610907 [Citrus sinensis]
          Length = 1231

 Score =  157 bits (397), Expect = 4e-36
 Identities = 91/271 (33%), Positives = 160/271 (59%), Gaps = 4/271 (1%)
 Frame = +3

Query: 6   SQKAYVRRAARPGEML-SLGAPRKVRKTDDVISFSEEDARDLHHPHDDALVVSLTISNFE 182
           S+K Y R A    E+  +    ++ R     I +++ED   + +PH+DALV+  T+++ +
Sbjct: 38  SRKNYARYAMTSKELFFNTPVAKRARVRQVPIIWTDEDKEGILYPHEDALVIKATVASKK 97

Query: 183 VYRMLIDGGSSADLLYLPAFEGMCIDRTQLRPVSNPLIGFSGERTRPLGAITLPLTAGAP 362
             R+LID GSS D+L+    E M I   +L   +  L GF G +  PLG + LP+T G+ 
Sbjct: 98  FDRILIDTGSSVDVLFKSTLEEMGIADLKLEYTNTSLKGFGGGKLVPLGVVELPITIGSS 157

Query: 363 PKQRTIMVEFLVIDCPSTYNGIIGRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGSQRQA 542
           PK+RT++++F+++D    Y  I+GRP     +AV S ++L +++  +  VG V+G QR A
Sbjct: 158 PKKRTMILDFVMVDEEGPYQMILGRPFPRMSKAVLSNHYLALKYQVNGVVGVVQGDQRIA 217

Query: 543 RECYATGLRERAGKVLQVEE-DGRDPPRQGGL-PAEQLKEVPI-SKDPKQVVKIGSQLEP 713
           R  Y++  RE     +Q+   D R   + G   P E+LK V +  ++  + ++IGS+L+ 
Sbjct: 218 RSYYSSAARE----AMQITSLDIRVKNKNGRQEPVEELKTVNLRPENLGKTIRIGSRLKE 273

Query: 714 KEEEDIIRCLRRNADLMAWSHSDMPGIDPSV 806
           ++++ +++CL+ + ++ AW+H DM GI+P V
Sbjct: 274 EQKQKLVQCLQAHTNMFAWTHEDMLGINPEV 304


>gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 504

 Score =  156 bits (395), Expect = 7e-36
 Identities = 93/267 (34%), Positives = 144/267 (53%), Gaps = 1/267 (0%)
 Frame = +3

Query: 9   QKAYVRRAARPGEMLSLGAPRKVRKTDDVISFSEEDARDLHHPHDDALVVSLTISNFEVY 188
           +KAYVR+    G       P     ++ VISF  EDA  +  PH D LV+S+ I+  EV 
Sbjct: 62  RKAYVRQINHVGTSYQSIPPAY---SNTVISFGPEDAEGILFPHQDPLVISVEITQCEVQ 118

Query: 189 RMLIDGGSSADLLYLPAFEGMCIDRTQLRPVSNPLIGFSGERTRPLGAITLPLTAGAPPK 368
           R+L+DGGSSAD+L+  AF+ M I   +L     PL GF G++   +G I+L +  G    
Sbjct: 119 RVLVDGGSSADVLFYDAFKKMQIPEDRLTHAGIPLQGFGGQQVHAIGKISLQVVFGGGEN 178

Query: 369 QRTIMVEFLVIDCPSTYNGIIGRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGSQRQARE 548
           +R   V F V+D P  YN I+GR T+N   A+    ++ M+ P   GV  VRG Q  AR+
Sbjct: 179 KRREEVVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMKLPGPKGVISVRGGQLAARK 238

Query: 549 CYATGLRERAGKVLQVEEDGRDPPRQGGLPAEQLKEVPISKDP-KQVVKIGSQLEPKEEE 725
               G     G  +  ++ G     Q  +P  + K+V + K+  ++ + IG  LE + EE
Sbjct: 239 FELQGTPNMKGVHIVEQKQGEYNKNQKPVPEGKTKKVVLDKNELEKYILIGENLEKEVEE 298

Query: 726 DIIRCLRRNADLMAWSHSDMPGIDPSV 806
           +I++ ++ N D+ AWS  ++ G++ S+
Sbjct: 299 EILKVVKANTDVFAWSPEELEGVERSL 325


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score =  154 bits (388), Expect = 5e-35
 Identities = 97/267 (36%), Positives = 142/267 (53%), Gaps = 1/267 (0%)
 Frame = +3

Query: 9    QKAYVRRAARPGEMLSLGAPRKVRKTDDVISFSEEDARDLHHPHDDALVVSLTISNFEVY 188
            +KAYVR+    G +     P    KT  VISF  EDA  +  PH D LVVS+ I+  EV 
Sbjct: 711  RKAYVRQVNHVGTIYQ-SKPPVYSKT--VISFGPEDAEGILFPHQDPLVVSVEIAQCEVQ 767

Query: 189  RMLIDGGSSADLLYLPAFEGMCIDRTQLRPVSNPLIGFSGERTRPLGAITLPLTAGAPPK 368
            R+LIDGGSSAD+L+  AF+ M I   +L     PL GF G++   +G I+L +  G    
Sbjct: 768  RVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGVPLQGFGGQQVHAIGKISLQVVFGKGTN 827

Query: 369  QRTIMVEFLVIDCPSTYNGIIGRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGSQRQARE 548
             R   + F V+D P  YN I+GR T+N   A+    ++ M+ P   GV  VRG Q  AR+
Sbjct: 828  VRKEEIVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMKLPGPRGVITVRGEQLVARK 887

Query: 549  CYATGLRERAGKVLQVEEDGRDPPRQGGLPAEQLKEVPISK-DPKQVVKIGSQLEPKEEE 725
                G     G  +  ++ G     Q  +P  + K+V + + DP + + IG  LE   EE
Sbjct: 888  YELQGTPSVKGVHVVDQKQGEYIKIQKPIPEGKTKKVQLDEHDPGKFILIGENLEKHIEE 947

Query: 726  DIIRCLRRNADLMAWSHSDMPGIDPSV 806
            +I++ ++ N  + AWS  ++ G+D S+
Sbjct: 948  EILKVVKENMAVFAWSPDELQGVDRSL 974


>dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
          Length = 1542

 Score =  154 bits (388), Expect = 5e-35
 Identities = 87/235 (37%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
 Frame = +3

Query: 111  EDARDLHHPHDDALVVSLTISNFEVYRMLIDGGSSADLLYLPAFEGMCIDRTQLRPVSNP 290
            +D   + + H+DALV+   ++  E+ R+L+D GSS D+L+  A + M I   +L   +  
Sbjct: 539  DDEEGILYLHEDALVIKAMVAAIELRRILVDTGSSVDILFKSALDDMGISDLKLERTNTS 598

Query: 291  LIGFSGERTRPLGAITLPLTAGAPPKQRTIMVEFLVIDCPSTYNGIIGRPTLNKLRAVAS 470
            L GF G R  P+G   LP+T G+ P +R +M+ F+V++  S Y  I+GRP +   + V S
Sbjct: 599  LKGFGGGRLTPMGINELPITVGSKPFERIVMLYFVVVEERSPYQMILGRPFIRISQCVIS 658

Query: 471  TYHLIMRFPTDHGVGEVRGSQRQARECYATGLRERAGKVLQVEE-DGRDPPRQGGL-PAE 644
            T++L +++  +  VG V+G Q+  R CYAT  +E     LQV   D R   ++G   P E
Sbjct: 659  THYLALKYRVNGVVGVVKGVQKMTRSCYATAAKE----TLQVTSLDNRGDSKKGRQEPVE 714

Query: 645  QLKEVPISK-DPKQVVKIGSQLEPKEEEDIIRCLRRNADLMAWSHSDMPGIDPSV 806
            +L EV ++K +P ++VKIGS L    + ++++ L+  AD+ AWSH DMP ID  +
Sbjct: 715  KLDEVFVNKSNPSRMVKIGSGLGETIKGELVKYLQSYADIFAWSHEDMPRIDHGI 769


>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score =  153 bits (387), Expect = 6e-35
 Identities = 97/267 (36%), Positives = 141/267 (52%), Gaps = 1/267 (0%)
 Frame = +3

Query: 9    QKAYVRRAARPGEMLSLGAPRKVRKTDDVISFSEEDARDLHHPHDDALVVSLTISNFEVY 188
            +KAYVR+    G       P    KT  VISF  EDA  +  PH D LVVS+ I+  EV 
Sbjct: 711  RKAYVRQVNHVGTSYQSNPP-VYSKT--VISFGPEDAEGILFPHQDPLVVSVEIAQCEVQ 767

Query: 189  RMLIDGGSSADLLYLPAFEGMCIDRTQLRPVSNPLIGFSGERTRPLGAITLPLTAGAPPK 368
            R+LIDGGSSAD+L+  AF+ M I   +L     PL GF G++   +G I+L +  G    
Sbjct: 768  RVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGVPLQGFGGQQVHAIGKISLQVVFGKGTN 827

Query: 369  QRTIMVEFLVIDCPSTYNGIIGRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGSQRQARE 548
             R   + F V+D P  YN I+GR T+N   A+    ++ M+ P   GV  VRG Q  AR+
Sbjct: 828  VRKEEIVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMKLPGPRGVITVRGEQLAARK 887

Query: 549  CYATGLRERAGKVLQVEEDGRDPPRQGGLPAEQLKEVPISK-DPKQVVKIGSQLEPKEEE 725
                G     G  +  ++ G     Q  +P  + K+V + + DP + + IG  LE   EE
Sbjct: 888  YELQGTPSVKGVHVVDQKQGEYIKIQKPIPEGKTKKVQLDEHDPGKFILIGENLEKHIEE 947

Query: 726  DIIRCLRRNADLMAWSHSDMPGIDPSV 806
            +I++ ++ N  + AWS  ++ G+D S+
Sbjct: 948  EILKVVKENMAVFAWSPDELQGVDRSL 974


>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 889

 Score =  153 bits (387), Expect = 6e-35
 Identities = 91/252 (36%), Positives = 143/252 (56%), Gaps = 11/252 (4%)
 Frame = +3

Query: 72  KVRKTDDVISFSEEDARDLHHPHDDALVVSLTISNFEVYRMLIDGGSSADLLYLPAFEGM 251
           K +K DD I+F E +  DL  PHDDALV+ + + N+E+  +++D GSS D+L+  AF+  
Sbjct: 39  KRQKPDDGITFWESEITDLDKPHDDALVIRIDVGNYELSCIMVDTGSSVDVLFYDAFKRT 98

Query: 252 CIDRTQLRPVSNPLIGFSGERTRPLGAITLPLTAGAPPKQRTIMVEFLVIDCPSTYNGII 431
               ++L+    PL GF+G+ T  +G I LP  A    +    +  FLV+D  + +N I+
Sbjct: 99  GHLDSKLQGRKTPLTGFAGDTTFSIGTIQLPTIARGVRQ----LTNFLVVDKKAPFNAIL 154

Query: 432 GRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGSQRQARECYA---TGLRERAGKVLQVEE 602
           GRP L+ ++AV STYH  ++FP+  G+  V GSQR +R+CY      +++    VL +E+
Sbjct: 155 GRPWLHVMKAVPSTYHQCIKFPSYKGIAVVYGSQRSSRKCYMGSYEDIKKADPVVLMIED 214

Query: 603 DGRD-------PPRQGGLPAEQLKEVPISK-DPKQVVKIGSQLEPKEEEDIIRCLRRNAD 758
           +  +        P Q G     + +V I + DPK+ V IG  L+    ED+I  L+ N D
Sbjct: 215 ELAEMKTVRSLDPSQRGTRKSLITQVCIDESDPKRCVGIGHDLDLTVREDLITFLKENKD 274

Query: 759 LMAWSHSDMPGI 794
             AWS +++ GI
Sbjct: 275 SFAWSSANLQGI 286


>gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|4378066|gb|AAD19359.1| polyprotein
            [Sorghum bicolor]
          Length = 1877

 Score =  152 bits (384), Expect = 1e-34
 Identities = 86/245 (35%), Positives = 135/245 (55%), Gaps = 8/245 (3%)
 Frame = +3

Query: 96   ISFSEEDARDLHHPHDDALVVSLTISNFEVYRMLIDGGSSADLLYLPAFEGMCIDRTQLR 275
            I+F+EED R   +PH DALV++  ++ + V R+L+D GSSAD+++   F+ M + R+QL+
Sbjct: 620  ITFTEEDLRLESYPHTDALVITTNVAGWGVSRILVDSGSSADIIFAGTFDQMKLSRSQLQ 679

Query: 276  PVSNPLIGFSGERTRPLGAITLPLTAGAPPKQRTIMVEFLVIDCPSTYNGIIGRPTLNKL 455
            P  +PLIGF G++   LG + LP++ G     RT  V F V+D    YN I GR  LNK 
Sbjct: 680  PSESPLIGFGGKQIHALGKVALPVSFGTTENARTEYVTFDVVDLHYPYNAIFGRGFLNKF 739

Query: 456  RAVASTYHLIMRFPTDHGVGEVRGSQRQARECYATGLR--ERAGKVLQVEEDGRDPP--- 620
             A A   +L M+ P  HGV  V GSQ++AR       +       V   + +   PP   
Sbjct: 740  NAAAHMGYLCMKIPALHGVITVHGSQKEARNIEKAIYKSFRNINSVDSTQHEASQPPDMP 799

Query: 621  --RQGGLPAEQLKEVPISKD-PKQVVKIGSQLEPKEEEDIIRCLRRNADLMAWSHSDMPG 791
              +      E+ K +P+ +  P + V I + L  +EE +++  L++N D+ AWS +D+ G
Sbjct: 800  RGKTNLADQEETKCIPLQEAVPDKKVTISATLSREEELELLDVLQKNQDIFAWSAADLQG 859

Query: 792  IDPSV 806
            +   +
Sbjct: 860  VSRDI 864


>ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623105 [Citrus sinensis]
          Length = 1407

 Score =  149 bits (376), Expect = 1e-33
 Identities = 93/268 (34%), Positives = 144/268 (53%), Gaps = 1/268 (0%)
 Frame = +3

Query: 6    SQKAYVRRAARPGEML-SLGAPRKVRKTDDVISFSEEDARDLHHPHDDALVVSLTISNFE 182
            S+K Y R A    E+L +  A ++ R     I +++ED   + +PH+DALV+  T+++ +
Sbjct: 624  SRKNYARYAMTSKEILFNTPAAKRARVRQVPIMWTDEDEEGILYPHEDALVIEATVASKK 683

Query: 183  VYRMLIDGGSSADLLYLPAFEGMCIDRTQLRPVSNPLIGFSGERTRPLGAITLPLTAGAP 362
              R+L+D  SS D+L+    E M I   +L   +  L GF G +  PLG + LP+T G+P
Sbjct: 684  FDRILVDTWSSVDVLFKSTLEEMGIADRKLEYTNTSLKGFGGGKLVPLGVVKLPITVGSP 743

Query: 363  PKQRTIMVEFLVIDCPSTYNGIIGRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGSQRQA 542
            P +RT++++F+V+D    Y  I+GRP L   +AV S ++L +++  +  VG VRG QR A
Sbjct: 744  PTERTMILDFVVVDEEGPYQMILGRPFLRMSKAVLSNHYLALKYRVNGVVGVVRGDQRIA 803

Query: 543  RECYATGLRERAGKVLQVEEDGRDPPRQGGLPAEQLKEVPISKDPKQVVKIGSQLEPKEE 722
            R CY++  RE     +Q+                       S D +   K G Q EP E+
Sbjct: 804  RSCYSSAARE----AMQI----------------------TSLDTRVENKTGRQ-EPVED 836

Query: 723  EDIIRCLRRNADLMAWSHSDMPGIDPSV 806
             +       +AD+ AW+H DMPGIDP V
Sbjct: 837  LE-----TAHADVFAWTHEDMPGIDPEV 859


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  145 bits (366), Expect = 2e-32
 Identities = 86/271 (31%), Positives = 143/271 (52%), Gaps = 34/271 (12%)
 Frame = +3

Query: 96   ISFSEEDARDLHHPHDDALVVSLTISNFEVYRMLIDGGSSADLLYLPAFEGMCIDRTQLR 275
            I+F++ED   +    DD +V+++ I  F + ++L+D GSS D+LY   F+ M I   +++
Sbjct: 622  ITFTDEDFTAIDPSQDDPMVITVEIDKFAIAKVLVDQGSSVDILYWETFKKMKIPEAEIQ 681

Query: 276  PVSNPLIGFSGERTRPLGAITLPLTAGAPPKQRTIMVEFLVIDCPSTYNGIIGRPTLNKL 455
            P +  ++GFS ER    G I L  T G     +TI + +L+++  ++YN ++GRP++N+L
Sbjct: 682  PYNEQIVGFSRERVDTKGFIDLYTTFGDDYLSKTINIRYLLVNANTSYNILLGRPSINRL 741

Query: 456  RAVASTYHLIMRFPTDHG-VGEVRGSQRQARECYATGLR----------------ERAGK 584
            +A+ ST HL M+FP+ +G +  V   Q+ ARECY   L+                ER G+
Sbjct: 742  KAIVSTPHLAMKFPSVNGDIATVHIDQKTARECYVASLKVEPTRRLYTTSAERTTERRGR 801

Query: 585  VLQVEEDGR-----------------DPPRQGGLPAEQLKEVPISKDPKQVVKIGSQLEP 713
              +    GR                 DP  + G   E L+ +   +D  +   +G+ L+P
Sbjct: 802  STERRSRGRESRRHLVALVDLDPRLDDPRMEAG---EDLQPI-FLRDKDRKTYMGTSLKP 857

Query: 714  KEEEDIIRCLRRNADLMAWSHSDMPGIDPSV 806
             + E I + L +NADL AW+ +DMPG+   V
Sbjct: 858  DDRETIGKTLTKNADLFAWTAADMPGVKSDV 888


>emb|CAD40452.2| OSJNBa0041M21.10 [Oryza sativa Japonica Group]
            gi|38343994|emb|CAD40359.2| OSJNBa0093P23.5 [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  145 bits (365), Expect = 2e-32
 Identities = 88/246 (35%), Positives = 132/246 (53%), Gaps = 1/246 (0%)
 Frame = +3

Query: 60   GAPRKVRKTDDVISFSEEDARDLHHPHDDALVVSLTISNFEVYRMLIDGGSSADLLYLPA 239
            GAP+ V +   +ISF  EDA  +  PH D LV+S  I+ FEV R+L+DGGSSAD++Y  A
Sbjct: 1441 GAPQYVNQ---LISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILVDGGSSADVIYAEA 1497

Query: 240  FEGMCIDRTQLRPVSNPLIGFSGERTRPLGAITLPLTAGAPPKQRTIMVEFLVIDCPSTY 419
            +  M +    L P    L GFSGE  + LG   L +  G+   +R   + F V++ P  Y
Sbjct: 1498 YAKMGLPTQALTPALTSLRGFSGEAVQVLGQALLLIAFGSGENRREEQILFDVVNIPYNY 1557

Query: 420  NGIIGRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGSQRQARECYATGLRERAGKVLQVE 599
            N I GR TLNKL A++   +L ++ P   GV  V+G Q  A       +  RA   ++ E
Sbjct: 1558 NAIFGRATLNKLEAISHHNYLKLKMPGPTGVIVVKGLQPSAASKCDLAIINRAVHNVKTE 1617

Query: 600  EDGRDPPRQGGLPAEQLKEVPIS-KDPKQVVKIGSQLEPKEEEDIIRCLRRNADLMAWSH 776
               R        P  ++ +V I+  DP ++V +G  +  +E E I+  L++N D+ AWS 
Sbjct: 1618 PHERPKHTPKPTPHGKVTKVQINDADPTKLVSLGGDMGEEEVESILEVLKKNIDIFAWSP 1677

Query: 777  SDMPGI 794
             ++ G+
Sbjct: 1678 DEVGGV 1683


>emb|CAH66268.1| OSIGBa0136B09.4 [Oryza sativa Indica Group]
          Length = 1348

 Score =  145 bits (365), Expect = 2e-32
 Identities = 88/246 (35%), Positives = 132/246 (53%), Gaps = 1/246 (0%)
 Frame = +3

Query: 60   GAPRKVRKTDDVISFSEEDARDLHHPHDDALVVSLTISNFEVYRMLIDGGSSADLLYLPA 239
            GAP+ V +   +ISF  EDA  +  PH D LV+S  I+ FEV R+L+DGGSSAD++Y  A
Sbjct: 715  GAPQYVNQ---LISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILVDGGSSADVIYAEA 771

Query: 240  FEGMCIDRTQLRPVSNPLIGFSGERTRPLGAITLPLTAGAPPKQRTIMVEFLVIDCPSTY 419
            +  M +    L P    L GFSGE  + LG   L +  G+   +R   + F V++ P  Y
Sbjct: 772  YAKMGLPTQALTPALTSLRGFSGEAVQVLGQALLLIAFGSGENRREEQILFDVVNIPYNY 831

Query: 420  NGIIGRPTLNKLRAVASTYHLIMRFPTDHGVGEVRGSQRQARECYATGLRERAGKVLQVE 599
            N I GR TLNKL A++   +L ++ P   GV  V+G Q  A       +  RA   ++ E
Sbjct: 832  NAIFGRATLNKLEAISHHNYLKLKMPGPTGVIVVKGLQPSAASKCDLAIINRAVHNVKTE 891

Query: 600  EDGRDPPRQGGLPAEQLKEVPIS-KDPKQVVKIGSQLEPKEEEDIIRCLRRNADLMAWSH 776
               R        P  ++ +V I+  DP ++V +G  +  +E E I+  L++N D+ AWS 
Sbjct: 892  PHERPKHTPKPTPHGKVTKVQINDADPTKLVSLGGDMGEEEVESILEVLKKNIDIFAWSP 951

Query: 777  SDMPGI 794
             ++ G+
Sbjct: 952  DEVGGV 957


>ref|XP_005315177.1| PREDICTED: uncharacterized protein LOC101933223 [Chrysemys picta
           bellii]
          Length = 1317

 Score =  142 bits (358), Expect = 1e-31
 Identities = 84/240 (35%), Positives = 132/240 (55%), Gaps = 3/240 (1%)
 Frame = +3

Query: 96  ISFSEEDARDLHHPHDDALVVSLTISNFEVYRMLIDGGSSADLLYLPAFEGMCIDRTQLR 275
           I+FS+ED +   +PH+DA+V+S  I  F V+ +L+D GS+AD+++  AF  M     ++ 
Sbjct: 60  ITFSQEDLQLKDYPHNDAMVISCVIKGFLVHNVLVDTGSAADIIFAKAFRQMQEPEDKIH 119

Query: 276 PVSNPLIGFSGERTRPLGAITLPLTAGAPPKQRTIMVEFLVIDCPSTYNGIIGRPTLNKL 455
             ++PL GF G +   LG IT+P+T G     RT  + F ++D    YN IIGR TLN  
Sbjct: 120 DATHPLCGFGGRQIVALGKITMPVTFGFVNNTRTEQIVFDIVDMEYPYNAIIGRGTLNAF 179

Query: 456 RAVASTYHLIMRFPTDHGVGEVRGSQRQARECYATGLRERAGKVLQVEE--DGRDPPRQG 629
            A+    +L M+ P+D G   + GSQ  AR    +    +A   +   E  +     R+ 
Sbjct: 180 EAILHPAYLCMKIPSDQGPIAIHGSQEAARRAEGSWTDSKAIHNIDGVEACEQYKFRREK 239

Query: 630 GLPAEQLKEVPISKD-PKQVVKIGSQLEPKEEEDIIRCLRRNADLMAWSHSDMPGIDPSV 806
              A+Q K + + +D  +Q V +GSQL   +E+ +IR L  N D+ AWS +D+ G++  V
Sbjct: 240 AASADQPKPMLLCEDIAEQKVLLGSQLSEDQEKTLIRFLFNNKDVFAWSANDLCGVNRDV 299