BLASTX nr result
ID: Stemona21_contig00019511
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00019511
(470 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypepti... 139 3e-31
ref|NP_001067017.1| Os12g0560400 [Oryza sativa Japonica Group] g... 139 3e-31
ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, ... 138 7e-31
dbj|BAK01857.1| predicted protein [Hordeum vulgare subsp. vulgare] 137 1e-30
ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II su... 137 1e-30
gb|EXB55730.1| DNA-directed RNA polymerase II subunit [Morus not... 133 2e-29
ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su... 133 2e-29
ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [S... 133 2e-29
ref|XP_004487774.1| PREDICTED: DNA-directed RNA polymerase II su... 133 3e-29
ref|XP_002519205.1| DNA-directed RNA polymerase II, putative [Ri... 132 4e-29
ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin... 132 5e-29
ref|NP_001150634.1| LOC100284267 [Zea mays] gi|195640756|gb|ACG3... 132 5e-29
ref|XP_002312337.1| DNA-directed RNA polymerase II family protei... 131 1e-28
ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su... 131 1e-28
gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus pe... 130 1e-28
ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 ... 130 1e-28
gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus... 129 3e-28
ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II su... 129 3e-28
ref|XP_004962772.1| PREDICTED: DNA-directed RNA polymerase II su... 129 4e-28
gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao] 129 4e-28
>gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|125537020|gb|EAY83508.1| hypothetical protein
OsI_38722 [Oryza sativa Indica Group]
gi|125579719|gb|EAZ20865.1| hypothetical protein
OsJ_36504 [Oryza sativa Japonica Group]
Length = 114
Score = 139 bits (351), Expect = 3e-31
Identities = 63/68 (92%), Positives = 64/68 (94%)
Frame = +1
Query: 1 VVHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNP 180
VVHHSAGEFTQVLQDVA DPTLPRTKAVRCAVC H EAVFFQA ARGEEGMTLFFVCCNP
Sbjct: 47 VVHHSAGEFTQVLQDVAGDPTLPRTKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNP 106
Query: 181 SCGHRWRD 204
SCGHRWR+
Sbjct: 107 SCGHRWRE 114
>ref|NP_001067017.1| Os12g0560400 [Oryza sativa Japonica Group]
gi|113649524|dbj|BAF30036.1| Os12g0560400, partial
[Oryza sativa Japonica Group]
Length = 104
Score = 139 bits (351), Expect = 3e-31
Identities = 63/68 (92%), Positives = 64/68 (94%)
Frame = +1
Query: 1 VVHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNP 180
VVHHSAGEFTQVLQDVA DPTLPRTKAVRCAVC H EAVFFQA ARGEEGMTLFFVCCNP
Sbjct: 37 VVHHSAGEFTQVLQDVAGDPTLPRTKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNP 96
Query: 181 SCGHRWRD 204
SCGHRWR+
Sbjct: 97 SCGHRWRE 104
>ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
9B-like [Oryza brachyantha]
Length = 114
Score = 138 bits (348), Expect = 7e-31
Identities = 62/68 (91%), Positives = 64/68 (94%)
Frame = +1
Query: 1 VVHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNP 180
VVHHSAGEFTQVLQDVA DPTLPRTK+VRCAVC H EAVFFQA ARGEEGMTLFFVCCNP
Sbjct: 47 VVHHSAGEFTQVLQDVAGDPTLPRTKSVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNP 106
Query: 181 SCGHRWRD 204
SCGHRWR+
Sbjct: 107 SCGHRWRE 114
>dbj|BAK01857.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 85
Score = 137 bits (346), Expect = 1e-30
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +1
Query: 1 VVHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNP 180
VVHHSAGEFTQVLQDVA DPTLPRTK VRCAVC H EAVFFQA ARGEEGMTLFFVCCNP
Sbjct: 18 VVHHSAGEFTQVLQDVAGDPTLPRTKEVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNP 77
Query: 181 SCGHRWRD 204
SCGHRWR+
Sbjct: 78 SCGHRWRE 85
>ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Brachypodium distachyon] gi|326497375|dbj|BAK02272.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 114
Score = 137 bits (346), Expect = 1e-30
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +1
Query: 1 VVHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNP 180
VVHHSAGEFTQVLQDVA DPTLPRTK VRCAVC H EAVFFQA ARGEEGMTLFFVCCNP
Sbjct: 47 VVHHSAGEFTQVLQDVAGDPTLPRTKEVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNP 106
Query: 181 SCGHRWRD 204
SCGHRWR+
Sbjct: 107 SCGHRWRE 114
>gb|EXB55730.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 192
Score = 133 bits (335), Expect = 2e-29
Identities = 59/67 (88%), Positives = 62/67 (92%)
Frame = +1
Query: 4 VHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNPS 183
+HHS GE TQVLQDVAADPTLPRTK+VRCA CNH EAVFFQA ARGEEGMTLFFVCCNP+
Sbjct: 126 IHHSVGERTQVLQDVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPN 185
Query: 184 CGHRWRD 204
CGHRWRD
Sbjct: 186 CGHRWRD 192
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Frame = +1
Query: 31 QVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAA------ARGEEGMTLFFVCCNPSCGH 192
Q+LQDV ADPTLPRT+ VRCA C+H +AVFFQ + + L + C N C H
Sbjct: 55 QILQDVTADPTLPRTRTVRCAQCSHEQAVFFQHSNNILYPKEDRDQKILLYACRN--CDH 112
Query: 193 RWRD*RNILKRN 228
+ N + RN
Sbjct: 113 QEVADNNCVYRN 124
>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Cucumis sativus] gi|449517969|ref|XP_004166016.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB9-like [Cucumis sativus]
Length = 114
Score = 133 bits (335), Expect = 2e-29
Identities = 59/67 (88%), Positives = 62/67 (92%)
Frame = +1
Query: 4 VHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNPS 183
+HH+ GE TQVLQDVAADPTLPRTKAVRCA CNH EAVFFQA ARGEEGMTLFFVCCNP+
Sbjct: 48 IHHAVGERTQVLQDVAADPTLPRTKAVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPN 107
Query: 184 CGHRWRD 204
CGHRWRD
Sbjct: 108 CGHRWRD 114
>ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [Sorghum bicolor]
gi|241944049|gb|EES17194.1| hypothetical protein
SORBIDRAFT_08g018130 [Sorghum bicolor]
Length = 114
Score = 133 bits (335), Expect = 2e-29
Identities = 60/68 (88%), Positives = 63/68 (92%)
Frame = +1
Query: 1 VVHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNP 180
VVHHSAGEFTQVLQDVA DPTLPRTK+VRCA C H EAVFFQA ARGEEGMTLFFVCCNP
Sbjct: 47 VVHHSAGEFTQVLQDVAGDPTLPRTKSVRCASCGHGEAVFFQATARGEEGMTLFFVCCNP 106
Query: 181 SCGHRWRD 204
SCG+RWR+
Sbjct: 107 SCGNRWRE 114
>ref|XP_004487774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Cicer
arietinum]
Length = 114
Score = 133 bits (334), Expect = 3e-29
Identities = 59/67 (88%), Positives = 61/67 (91%)
Frame = +1
Query: 4 VHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNPS 183
+HHS GE TQVLQDVAADPTLPRTKAVRC CNH EAVFFQA ARGEEGMTLFFVCCNP+
Sbjct: 48 IHHSVGERTQVLQDVAADPTLPRTKAVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPN 107
Query: 184 CGHRWRD 204
CGHRWRD
Sbjct: 108 CGHRWRD 114
>ref|XP_002519205.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223541520|gb|EEF43069.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 266
Score = 132 bits (333), Expect = 4e-29
Identities = 60/67 (89%), Positives = 60/67 (89%)
Frame = +1
Query: 4 VHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNPS 183
VHHSA E TQVLQDVAADPTLPRTKAV C VC HPEAVFFQA ARGEEGMTLFFVCCNP
Sbjct: 200 VHHSAAERTQVLQDVAADPTLPRTKAVECQVCKHPEAVFFQATARGEEGMTLFFVCCNPI 259
Query: 184 CGHRWRD 204
CGHRWRD
Sbjct: 260 CGHRWRD 266
Score = 68.9 bits (167), Expect = 6e-10
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +1
Query: 4 VHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQ 126
+HHS E TQ+LQDVA+DPTLPRTK+VRC+ C H EAVF Q
Sbjct: 48 IHHSVSEHTQILQDVASDPTLPRTKSVRCSACGHGEAVFLQ 88
>ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max]
gi|255627167|gb|ACU13928.1| unknown [Glycine max]
Length = 114
Score = 132 bits (332), Expect = 5e-29
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = +1
Query: 4 VHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNPS 183
+HHS GE TQVLQDVAADPTLPRTK+VRC+ CNH EAVFFQA ARGEEGMTLFFVCCNP+
Sbjct: 48 IHHSVGERTQVLQDVAADPTLPRTKSVRCSQCNHGEAVFFQATARGEEGMTLFFVCCNPN 107
Query: 184 CGHRWRD 204
CGHRWRD
Sbjct: 108 CGHRWRD 114
>ref|NP_001150634.1| LOC100284267 [Zea mays] gi|195640756|gb|ACG39846.1| DNA-directed
RNA polymerase II 14.5 kDa polypeptide [Zea mays]
gi|414878124|tpg|DAA55255.1| TPA: DNA-directed RNA
polymerase subunit [Zea mays]
Length = 114
Score = 132 bits (332), Expect = 5e-29
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +1
Query: 1 VVHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNP 180
VVHHSAGEFTQVLQDVA DPTLPRTK+VRC+ C H EAVFFQA ARGEEGMTLFFVCCNP
Sbjct: 47 VVHHSAGEFTQVLQDVAGDPTLPRTKSVRCSSCGHGEAVFFQATARGEEGMTLFFVCCNP 106
Query: 181 SCGHRWRD 204
SCG+RWR+
Sbjct: 107 SCGNRWRE 114
>ref|XP_002312337.1| DNA-directed RNA polymerase II family protein [Populus trichocarpa]
gi|222852157|gb|EEE89704.1| DNA-directed RNA polymerase
II family protein [Populus trichocarpa]
Length = 114
Score = 131 bits (329), Expect = 1e-28
Identities = 58/67 (86%), Positives = 60/67 (89%)
Frame = +1
Query: 4 VHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNPS 183
VHHS E TQVLQDVAADPTLPRTKAV C VC HPEAVFFQA +RGEEGMTLFFVCCNP+
Sbjct: 48 VHHSVAERTQVLQDVAADPTLPRTKAVTCTVCKHPEAVFFQATSRGEEGMTLFFVCCNPN 107
Query: 184 CGHRWRD 204
CGHRWRD
Sbjct: 108 CGHRWRD 114
>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
vinifera] gi|147769002|emb|CAN66735.1| hypothetical
protein VITISV_024186 [Vitis vinifera]
gi|296083263|emb|CBI22899.3| unnamed protein product
[Vitis vinifera]
Length = 114
Score = 131 bits (329), Expect = 1e-28
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = +1
Query: 4 VHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNPS 183
+HHS GE TQVLQDVAADPTLPRTK+VRCA CNH EAVFFQA ARGEEGMTLFFVCCNP+
Sbjct: 48 IHHSVGERTQVLQDVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPN 107
Query: 184 CGHRWRD 204
CG+RWRD
Sbjct: 108 CGYRWRD 114
>gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus persica]
Length = 114
Score = 130 bits (328), Expect = 1e-28
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +1
Query: 4 VHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNPS 183
+HH+ GE TQ+LQDVAADPTLPRTKAVRC+ C H EAVFFQA ARGEEGMTLFFVCCNPS
Sbjct: 48 IHHAVGERTQILQDVAADPTLPRTKAVRCSECKHGEAVFFQATARGEEGMTLFFVCCNPS 107
Query: 184 CGHRWRD 204
CGHRWRD
Sbjct: 108 CGHRWRD 114
>ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 [Medicago truncatula]
gi|87240462|gb|ABD32320.1| DNA-directed RNA polymerase,
subunit C11/M/9 [Medicago truncatula]
gi|217075262|gb|ACJ85991.1| unknown [Medicago
truncatula] gi|355483825|gb|AES65028.1| DNA-directed RNA
polymerase II subunit RPB9 [Medicago truncatula]
gi|388497558|gb|AFK36845.1| unknown [Medicago
truncatula]
Length = 114
Score = 130 bits (328), Expect = 1e-28
Identities = 58/67 (86%), Positives = 60/67 (89%)
Frame = +1
Query: 4 VHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNPS 183
+HHS E TQVLQDVAADPTLPRTKAVRC CNH EAVFFQA ARGEEGMTLFFVCCNP+
Sbjct: 48 IHHSVAERTQVLQDVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPN 107
Query: 184 CGHRWRD 204
CGHRWRD
Sbjct: 108 CGHRWRD 114
>gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus vulgaris]
Length = 114
Score = 129 bits (325), Expect = 3e-28
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +1
Query: 4 VHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNPS 183
+HHS GE TQVLQDVAADPTLPRTK+VRC CNH EAVFFQA ARGEEGMTLFFVCCNP+
Sbjct: 48 IHHSVGERTQVLQDVAADPTLPRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPN 107
Query: 184 CGHRWRD 204
CG+RWRD
Sbjct: 108 CGYRWRD 114
>ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Fragaria vesca subsp. vesca]
Length = 114
Score = 129 bits (325), Expect = 3e-28
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +1
Query: 4 VHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNPS 183
+HHS GE TQ+LQDVAADPTLPRTKAVRCA C H EAVFFQA ARGEEGMTLFFVCCNP+
Sbjct: 48 IHHSVGERTQILQDVAADPTLPRTKAVRCAQCKHGEAVFFQATARGEEGMTLFFVCCNPN 107
Query: 184 CGHRWRD 204
CG+RWRD
Sbjct: 108 CGYRWRD 114
>ref|XP_004962772.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Setaria italica]
Length = 114
Score = 129 bits (324), Expect = 4e-28
Identities = 59/68 (86%), Positives = 61/68 (89%)
Frame = +1
Query: 1 VVHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNP 180
VVHHSAGEFTQVLQDVA DPTLPRTK VRCAVC H EAVFFQA RGEEGMTLFFVCCN
Sbjct: 47 VVHHSAGEFTQVLQDVAGDPTLPRTKDVRCAVCGHGEAVFFQATVRGEEGMTLFFVCCNL 106
Query: 181 SCGHRWRD 204
SCG+RWR+
Sbjct: 107 SCGNRWRE 114
>gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao]
Length = 114
Score = 129 bits (324), Expect = 4e-28
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +1
Query: 4 VHHSAGEFTQVLQDVAADPTLPRTKAVRCAVCNHPEAVFFQAAARGEEGMTLFFVCCNPS 183
VHHSAGE TQ+LQDVAADPTLPRTK+V CA C H EAVFFQA ARGEEGMTLFFVCCNP+
Sbjct: 48 VHHSAGERTQILQDVAADPTLPRTKSVICANCKHGEAVFFQATARGEEGMTLFFVCCNPN 107
Query: 184 CGHRWRD 204
CGHRWRD
Sbjct: 108 CGHRWRD 114