BLASTX nr result

ID: Stemona21_contig00018453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00018453
         (273 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY12131.1| RNA binding protein, putative isoform 3, partial ...    88   1e-15
gb|EOY12129.1| RNA binding protein, putative isoform 1 [Theobrom...    88   1e-15
ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [A...    86   4e-15
gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-bind...    86   4e-15
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...    86   4e-15
gb|EOY12130.1| RNA binding protein, putative isoform 2 [Theobrom...    84   1e-14
ref|XP_002320513.1| RNA recognition motif-containing family prot...    82   7e-14
ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citr...    81   2e-13
ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citr...    81   2e-13
gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus pe...    80   2e-13
gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Mo...    80   3e-13
emb|CAN64426.1| hypothetical protein VITISV_022456 [Vitis vinifera]    80   3e-13
ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containin...    79   5e-13
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin...    75   9e-12
ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containin...    75   9e-12
ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containin...    75   9e-12
ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containin...    75   9e-12
ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citr...    75   9e-12
ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containin...    74   2e-11
gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Mo...    71   1e-10

>gb|EOY12131.1| RNA binding protein, putative isoform 3, partial [Theobroma cacao]
          Length = 507

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 41/74 (55%), Positives = 55/74 (74%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMDPR----P 104
           TV+ IL+KG PHY+CGARVLVKPY+EKS+LVD K+ ++IE PMY+ P Y+ M+P     P
Sbjct: 394 TVKMILAKGNPHYVCGARVLVKPYREKSKLVDRKYQDRIESPMYYSPHYIDMEPELHSIP 453

Query: 103 RVYDHPVLFKRQIM 62
           R Y    LF++Q +
Sbjct: 454 RGYAMSRLFRKQFI 467


>gb|EOY12129.1| RNA binding protein, putative isoform 1 [Theobroma cacao]
          Length = 568

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 41/74 (55%), Positives = 55/74 (74%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMDPR----P 104
           TV+ IL+KG PHY+CGARVLVKPY+EKS+LVD K+ ++IE PMY+ P Y+ M+P     P
Sbjct: 394 TVKMILAKGNPHYVCGARVLVKPYREKSKLVDRKYQDRIESPMYYSPHYIDMEPELHSIP 453

Query: 103 RVYDHPVLFKRQIM 62
           R Y    LF++Q +
Sbjct: 454 RGYAMSRLFRKQFI 467


>ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
           gi|548839320|gb|ERM99613.1| hypothetical protein
           AMTR_s00088p00158600 [Amborella trichopoda]
          Length = 575

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 39/73 (53%), Positives = 55/73 (75%), Gaps = 4/73 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMDPR----P 104
           TV+ IL+KG PH++CGARVLVKPY+EKSRLVD K+ EKI+ P+Y+ P +L M+P     P
Sbjct: 399 TVKMILNKGNPHFVCGARVLVKPYREKSRLVDRKYPEKIDHPVYYSPHFLDMEPEYQSVP 458

Query: 103 RVYDHPVLFKRQI 65
            ++D   L ++Q+
Sbjct: 459 GIWDDARLIRKQL 471


>gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
           putative isoform 1 [Theobroma cacao]
           gi|508701579|gb|EOX93475.1| CCCH-type zinc fingerfamily
           protein with RNA-binding domain, putative isoform 1
           [Theobroma cacao] gi|508701580|gb|EOX93476.1| CCCH-type
           zinc fingerfamily protein with RNA-binding domain,
           putative isoform 1 [Theobroma cacao]
          Length = 545

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 40/74 (54%), Positives = 56/74 (75%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYL----QMDPRP 104
           TV+ IL+KG PH++CGARVLVKPY+EKSR+VD KFTEK++ PMY+ P  +    ++   P
Sbjct: 400 TVKQILAKGNPHFVCGARVLVKPYREKSRVVDRKFTEKVQQPMYYSPHLIDGDTELQSMP 459

Query: 103 RVYDHPVLFKRQIM 62
           RV D+  L ++QI+
Sbjct: 460 RVCDNSRLLRKQII 473


>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
           gi|223525472|gb|EEF28048.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 578

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 38/74 (51%), Positives = 56/74 (75%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYL----QMDPRP 104
           TV+ IL+KG PHY+CGARVLVKPY+EKSRL+D KF+EK++ PMY+   ++    ++ P P
Sbjct: 402 TVKQILAKGNPHYVCGARVLVKPYREKSRLIDRKFSEKLQHPMYNSSHFIDGDSELHPMP 461

Query: 103 RVYDHPVLFKRQIM 62
            + D+  L ++Q+M
Sbjct: 462 TISDNSRLLRKQLM 475


>gb|EOY12130.1| RNA binding protein, putative isoform 2 [Theobroma cacao]
          Length = 569

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 41/75 (54%), Positives = 55/75 (73%), Gaps = 5/75 (6%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDG-KFTEKIEFPMYHPPQYLQMDPR---- 107
           TV+ IL+KG PHY+CGARVLVKPY+EKS+LVD  K+ ++IE PMY+ P Y+ M+P     
Sbjct: 394 TVKMILAKGNPHYVCGARVLVKPYREKSKLVDSRKYQDRIESPMYYSPHYIDMEPELHSI 453

Query: 106 PRVYDHPVLFKRQIM 62
           PR Y    LF++Q +
Sbjct: 454 PRGYAMSRLFRKQFI 468


>ref|XP_002320513.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222861286|gb|EEE98828.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 554

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 39/74 (52%), Positives = 53/74 (71%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMDPR----P 104
           TV+ ILSKG PH++CGARVLVKPY+EKSRLVD K+ EKI+ P ++   ++  D      P
Sbjct: 376 TVKQILSKGNPHHVCGARVLVKPYREKSRLVDRKYAEKIQHPFFYSQHFIDGDSELHSVP 435

Query: 103 RVYDHPVLFKRQIM 62
           RV D+  L ++Q+M
Sbjct: 436 RVCDNSRLLRKQLM 449


>ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
           gi|567921060|ref|XP_006452536.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|567921062|ref|XP_006452537.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|557555760|gb|ESR65774.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|557555762|gb|ESR65776.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|557555763|gb|ESR65777.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
          Length = 547

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 35/53 (66%), Positives = 45/53 (84%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMD 113
           TV+ IL+KG PH++CGARVLVKPY+EKS+LVD K+ E++E PMY  PQY+ MD
Sbjct: 389 TVKMILAKGNPHFVCGARVLVKPYREKSKLVDRKYQERMESPMYFSPQYVDMD 441


>ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
           gi|567921054|ref|XP_006452533.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|567921058|ref|XP_006452535.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|568841990|ref|XP_006474936.1| PREDICTED: zinc finger
           CCCH domain-containing protein 18-like isoform X1
           [Citrus sinensis] gi|568841992|ref|XP_006474937.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           18-like isoform X2 [Citrus sinensis]
           gi|557555758|gb|ESR65772.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|557555759|gb|ESR65773.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|557555761|gb|ESR65775.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
          Length = 565

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 35/53 (66%), Positives = 45/53 (84%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMD 113
           TV+ IL+KG PH++CGARVLVKPY+EKS+LVD K+ E++E PMY  PQY+ MD
Sbjct: 389 TVKMILAKGNPHFVCGARVLVKPYREKSKLVDRKYQERMESPMYFSPQYVDMD 441


>gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
          Length = 565

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMDPR----P 104
           TVRHILSKG PH++CGARVLVKPY+EKSRLVD KF+EK++  M +   ++  D      P
Sbjct: 385 TVRHILSKGNPHFVCGARVLVKPYREKSRLVDRKFSEKMQHAMCYNSHFIDADSEFHSMP 444

Query: 103 RVYDHPVLFKRQIM 62
           RV ++    ++Q M
Sbjct: 445 RVCENARFLRKQFM 458


>gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
          Length = 556

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 37/74 (50%), Positives = 53/74 (71%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMDPR----P 104
           TV+ IL+KG PH++CGARVLVKPY+EKS+LVD K++++ E P+Y+ P Y  M+       
Sbjct: 380 TVKMILAKGNPHFVCGARVLVKPYREKSKLVDRKYSDRFEAPVYYSPHYSDMEAEFHSIS 439

Query: 103 RVYDHPVLFKRQIM 62
           R Y++  L +RQ M
Sbjct: 440 RSYENSRLLRRQFM 453


>emb|CAN64426.1| hypothetical protein VITISV_022456 [Vitis vinifera]
          Length = 556

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/74 (54%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMDPR----P 104
           TV+ IL+KG PHY+CGARVLVKPY+EK R  D K++EK E  MY+P QY  MD      P
Sbjct: 364 TVKSILAKGSPHYVCGARVLVKPYREKPRTGDRKYSEKFESSMYYPLQYADMDSELHMMP 423

Query: 103 RVYDHPVLFKRQIM 62
           R  +   L ++QIM
Sbjct: 424 RGMETSRLLRKQIM 437


>ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
           vinifera] gi|297737542|emb|CBI26743.3| unnamed protein
           product [Vitis vinifera]
          Length = 544

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMDPR----P 104
           TV+ IL+KG PHY+CGARVLVKPY+EK R  D K+ EK E  MY+P QY  MD      P
Sbjct: 364 TVKSILAKGSPHYVCGARVLVKPYREKPRTGDRKYLEKFESSMYYPLQYADMDSELHMMP 423

Query: 103 RVYDHPVLFKRQIM 62
           R  +   L ++QIM
Sbjct: 424 RGMETSRLLRKQIM 437


>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X4 [Citrus sinensis]
          Length = 578

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMDPR----P 104
           TV+ IL+KG PH++CGARVLVKPY+EKSRLVD K+ EK++ P++    +   D      P
Sbjct: 399 TVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHFTDGDTELHTMP 458

Query: 103 RVYDHPVLFKRQIM 62
           RV ++  L ++Q+M
Sbjct: 459 RVCNNSRLLRKQLM 472


>ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X3 [Citrus sinensis]
          Length = 579

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMDPR----P 104
           TV+ IL+KG PH++CGARVLVKPY+EKSRLVD K+ EK++ P++    +   D      P
Sbjct: 399 TVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHFTDGDTELHTMP 458

Query: 103 RVYDHPVLFKRQIM 62
           RV ++  L ++Q+M
Sbjct: 459 RVCNNSRLLRKQLM 472


>ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X2 [Citrus sinensis]
          Length = 581

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMDPR----P 104
           TV+ IL+KG PH++CGARVLVKPY+EKSRLVD K+ EK++ P++    +   D      P
Sbjct: 402 TVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHFTDGDTELHTMP 461

Query: 103 RVYDHPVLFKRQIM 62
           RV ++  L ++Q+M
Sbjct: 462 RVCNNSRLLRKQLM 475


>ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X1 [Citrus sinensis]
          Length = 582

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMDPR----P 104
           TV+ IL+KG PH++CGARVLVKPY+EKSRLVD K+ EK++ P++    +   D      P
Sbjct: 402 TVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHFTDGDTELHTMP 461

Query: 103 RVYDHPVLFKRQIM 62
           RV ++  L ++Q+M
Sbjct: 462 RVCNNSRLLRKQLM 475


>ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citrus clementina]
           gi|557550378|gb|ESR61007.1| hypothetical protein
           CICLE_v10014902mg [Citrus clementina]
          Length = 524

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMDPR----P 104
           TV+ IL+KG PH++CGARVLVKPY+EKSRLVD K+ EK++ P++    +   D      P
Sbjct: 344 TVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHFTDGDTELHTMP 403

Query: 103 RVYDHPVLFKRQIM 62
           RV ++  L ++Q+M
Sbjct: 404 RVCNNSRLLRKQLM 417


>ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Fragaria vesca subsp. vesca]
          Length = 566

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMD----PRP 104
           TVRHILSKG PH++CGARVLVKPY+EKSR VD KF++K++        Y+  D      P
Sbjct: 387 TVRHILSKGNPHFVCGARVLVKPYREKSRPVDRKFSDKMQHSPCFNSHYIDADADLHSMP 446

Query: 103 RVYDHPVLFKRQIM 62
           R+ D   L ++Q +
Sbjct: 447 RICDSSRLLRKQFI 460


>gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
          Length = 557

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
 Frame = -3

Query: 271 TVRHILSKGCPHYICGARVLVKPYKEKSRLVDGKFTEKIEFPMYHPPQYLQMDPR----P 104
           TVR ILSKG PH++CGARVLVKPY+EKSRLVD KF EK+         ++  D      P
Sbjct: 379 TVRQILSKGNPHFVCGARVLVKPYREKSRLVDRKFAEKMLHASCCDQHFMDGDSEFHSLP 438

Query: 103 RVYDHPVLFKRQIM 62
           R Y  P   ++ +M
Sbjct: 439 RDYGKPRFLRKHLM 452


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