BLASTX nr result
ID: Stemona21_contig00018222
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00018222
(694 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA93966.1| retrotransposon protein, putative, Ty1-copia subc... 106 3e-33
gb|AAV59441.1| putative polyprotein [Oryza sativa Japonica Group] 103 3e-32
gb|AAV31347.1| putative polyprotein [Oryza sativa Japonica Group] 103 3e-32
gb|AAT69624.1| putative polyprotein [Oryza sativa Japonica Group] 105 6e-32
gb|AAT44242.1| putative ubiquitin carrier protein [Oryza sativa ... 104 6e-32
gb|ABA93737.1| retrotransposon protein, putative, Ty1-copia subc... 105 1e-30
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16... 105 4e-30
gb|AAL83348.1|AC074282_15 Putative gag-pol polyprotein [Oryza sa... 100 5e-30
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays] 101 9e-30
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays] 103 1e-29
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252... 109 2e-29
gb|AAW57815.1| putative polyprotein [Oryza sativa Japonica Group] 104 3e-29
gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subc... 100 6e-29
gb|ABB47727.2| retrotransposon protein, putative, Ty1-copia subc... 93 6e-29
gb|ABA98797.2| retrotransposon protein, putative, Ty1-copia subc... 93 7e-29
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854... 108 2e-28
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 108 3e-28
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 107 4e-28
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera] 106 4e-28
emb|CAE03908.2| OSJNBb0015G09.2 [Oryza sativa Japonica Group] 97 4e-28
>gb|ABA93966.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1212
Score = 106 bits (264), Expect(2) = 3e-33
Identities = 48/95 (50%), Positives = 68/95 (71%)
Frame = +3
Query: 375 KQTIGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQ 554
+ + V MGN + A V G G ++LK +SGKI+ L NVQHVP + +NL+SG L +
Sbjct: 305 RANVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRD 364
Query: 555 GYKLVFEANRVVISLNGVFVGKGYACGGLFKLNVA 659
G+KLVFE+N+VVIS +G F+GKGY CGGLF+ +++
Sbjct: 365 GFKLVFESNKVVISKHGYFIGKGYECGGLFRFSLS 399
Score = 62.4 bits (150), Expect(2) = 3e-33
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
F +LKHK++ S+ L+ SL +EE ++ +DA + ++N VV
Sbjct: 161 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSNANVVHKAQNKSKGKYKAQ 220
Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
N +++R CFVCG+ GH AR+C +RKG+ +P++ + ANV +
Sbjct: 221 QTTNFKKQKKNNNNPNQDERTCFVCGQPGHLARKCPQRKGM--KAPARQTYKSANVTI 276
>gb|AAV59441.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1225
Score = 103 bits (258), Expect(2) = 3e-32
Identities = 49/102 (48%), Positives = 69/102 (67%)
Frame = +3
Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
+ V MGN + A V G G ++L +SGKI+ L NVQHVP + +NL+SG L + G+K
Sbjct: 300 VARGSTVLMGNGSHASVHGVGMVDLMFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFK 359
Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFKLNVATISSSYNKVN 689
LVFE+N+VV+S +G F+GKGY CGGLF+ +++ Y VN
Sbjct: 360 LVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDF--CYKSVN 399
Score = 61.6 bits (148), Expect(2) = 3e-32
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
F +LKHK++ S+ L+ SL +EE ++ +DA + +++ VV
Sbjct: 161 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQ 220
Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
N +++R CFVCG++GH AR+C +RKG+ +P+ ++ ANV +
Sbjct: 221 QTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM--KAPAGQTSKSANVTI 276
>gb|AAV31347.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1059
Score = 103 bits (258), Expect(2) = 3e-32
Identities = 46/92 (50%), Positives = 67/92 (72%)
Frame = +3
Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
+ V MGN + A V G G ++LK +SGKI+ L NVQHVP + +NL+SG L + G+K
Sbjct: 431 VARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFK 490
Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFKLNVA 659
LVFE+N+VV+S +G F+GKG+ CGGLF+ +++
Sbjct: 491 LVFESNKVVVSKHGYFIGKGFECGGLFRFSLS 522
Score = 61.6 bits (148), Expect(2) = 3e-32
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
F +LKHK++ S+ L+ SL +EE ++ +DA + +++ VV
Sbjct: 284 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQ 343
Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
N +++R CFVCG++GH AR+C +RKG+ +P+ ++ ANV +
Sbjct: 344 QTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM--KAPAGQTSKSANVTI 399
>gb|AAT69624.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1401
Score = 105 bits (263), Expect(2) = 6e-32
Identities = 49/102 (48%), Positives = 72/102 (70%)
Frame = +3
Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
+G + MGN + A V G G ++LK +SGK + L NVQHVP + KNL+SG LL ++G++
Sbjct: 457 VGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVSGSLLCREGFR 516
Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFKLNVATISSSYNKVN 689
LVFE+N+ V+S G FVGKGY GGLF+ ++ + +++N VN
Sbjct: 517 LVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHNAVN 558
Score = 58.5 bits (140), Expect(2) = 6e-32
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVAN--EQAAKANLVVGXXXXXXXXXXXX 174
FA SLKHK++ S+PDL+ SL +EE ++ +D E + AN+V
Sbjct: 313 FATSLKHKRQEFSVPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKV 372
Query: 175 XXXXXXXXXAN-PNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
N K K K +CFVCGK GH+A+ C P AN+++
Sbjct: 373 KPDVKPKAATNFKKKGKGKTKGDCFVCGKSGHWAKDC----------PECKDRKSANMII 422
Query: 352 S 354
S
Sbjct: 423 S 423
>gb|AAT44242.1| putative ubiquitin carrier protein [Oryza sativa Japonica Group]
Length = 974
Score = 104 bits (259), Expect(2) = 6e-32
Identities = 47/92 (51%), Positives = 66/92 (71%)
Frame = +3
Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
+ V MGN + A V G G + LK +SGKI+ L NVQHVP + +NL+SG L + G+K
Sbjct: 265 VARGSTVLMGNGSHASVHGVGTVYLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFK 324
Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFKLNVA 659
LVFE+N+VV+S +G F+GKGY CGGLF+ +++
Sbjct: 325 LVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 356
Score = 60.1 bits (144), Expect(2) = 6e-32
Identities = 33/117 (28%), Positives = 58/117 (49%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANLVVGXXXXXXXXXXXXXX 180
F +LKHK++ S+ L+ SL +EE ++ +DA + ++
Sbjct: 147 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSTA----------------- 189
Query: 181 XXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
N N +++R CFVCG+ GH AR+C +RKG+ +P++ ++ ANV +
Sbjct: 190 -----NKKNNNNNPNQDERTCFVCGQPGHLARKCPQRKGM--KAPAEQTSKSANVTI 239
>gb|ABA93737.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1579
Score = 105 bits (262), Expect(2) = 1e-30
Identities = 47/92 (51%), Positives = 67/92 (72%)
Frame = +3
Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
+ V MGN + A V G G ++LK +SGKI+ L NVQHVP + +NL+SG L + G+K
Sbjct: 608 VARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFK 667
Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFKLNVA 659
LVFE+N+VV+S +G F+GKGY CGGLF+ +++
Sbjct: 668 LVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 699
Score = 54.7 bits (130), Expect(2) = 1e-30
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
F + K+K++ S+ L+ SL +EE ++ +DA + +++ VV
Sbjct: 461 FGTAFKYKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQ 520
Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
N +++R CFVCG++ H AR+C +RKG+ +P+ ++ ANV +
Sbjct: 521 QTTNFKKQKKNNNNPNQDERTCFVCGQVRHLARKCPQRKGM--KAPAGQTSKSANVTI 576
>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
gag/pol protein [Zea mays]
Length = 1279
Score = 105 bits (261), Expect(2) = 4e-30
Identities = 50/103 (48%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
Frame = +3
Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
+G + MGN + A VLG G + LK +SGK +PL +VQHVP + KNL+S +L + GYK
Sbjct: 298 VGRSGALLMGNGSRAHVLGVGTVILKFTSGKTVPLKSVQHVPSIKKNLVSASMLCRDGYK 357
Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFKLNVATISSS-YNKVN 689
+V E+N+ V+S +G FVGKGY CGGLF+L++ + + N VN
Sbjct: 358 VVLESNKCVVSKHGTFVGKGYECGGLFRLSLHDVCNKLVNSVN 400
Score = 53.1 bits (126), Expect(2) = 4e-30
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANLVVGXXXXXXXXXXXXXX 180
FA SLKHK++ ++ +L+ +L +EE ++ +D+ + + AN+V
Sbjct: 136 FATSLKHKRQEFNVEELIGTLDVEERARTKDSGKGVETSTANVVQKRNFRKFNKKKNQNK 195
Query: 181 XXXXXXXANPNIAKEKN-----KRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANV 345
+ K+KN K CFVCG H+AR+C RK + + T++
Sbjct: 196 PENANKPVHTAQFKKKNNNNKGKGGCFVCGSDQHWARECPDRKFTQDKKSANVVTTETEE 255
Query: 346 VVSG 357
SG
Sbjct: 256 GTSG 259
>gb|AAL83348.1|AC074282_15 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31429942|gb|AAP51926.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1109
Score = 99.8 bits (247), Expect(2) = 5e-30
Identities = 47/94 (50%), Positives = 68/94 (72%)
Frame = +3
Query: 408 MGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYKLVFEANRV 587
MGN + A V G G ++LK +SGK + L NVQHVP + KNL+SG LL ++G++LVFE+N+
Sbjct: 417 MGNRSLAAVHGVGTVDLKFTSGKTMQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKC 476
Query: 588 VISLNGVFVGKGYACGGLFKLNVATISSSYNKVN 689
V+S FVGKGY GGLF+ ++ + +++N VN
Sbjct: 477 VVSKYETFVGKGYDSGGLFRFSLNDMCNNHNVVN 510
Score = 58.2 bits (139), Expect(2) = 5e-30
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVAN--EQAAKANLVVGXXXXXXXXXXXX 174
FA SLKHK++ S+ DL+ SL +EE ++ +D E + AN+V
Sbjct: 266 FATSLKHKRQEFSVSDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKV 325
Query: 175 XXXXXXXXXAN-PNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
N K K K +CFVCGK GH+A+ C +RK + AN+VV
Sbjct: 326 KPDVKPKAATNFKKKGKGKAKGDCFVCGKSGHWAKDCPERK----------NRKSANMVV 375
Query: 352 S 354
S
Sbjct: 376 S 376
>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
Length = 1264
Score = 101 bits (252), Expect(2) = 9e-30
Identities = 46/88 (52%), Positives = 65/88 (73%)
Frame = +3
Query: 393 DERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYKLVF 572
D V MGN + A V G G ++LK +SGKI+ L NV HVP + KNL+SG LL + G+K+V
Sbjct: 287 DSSVLMGNGSHASVHGTGTVDLKFTSGKIVQLKNVHHVPSIHKNLVSGTLLCRDGFKVVL 346
Query: 573 EANRVVISLNGVFVGKGYACGGLFKLNV 656
E+N++V+S +G F+GKGY CGGLF+ ++
Sbjct: 347 ESNKLVVSKSGQFIGKGYDCGGLFRFSL 374
Score = 55.5 bits (132), Expect(2) = 9e-30
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRD--AVANEQAAKANLVVGXXXXXXXXXXXX 174
FA +LKHK++ IS+ +L+ SL +EE ++ +D + E + AN+V
Sbjct: 130 FATALKHKRQEISVENLIASLDVEEKARAKDTGSKGGEGHSSANMV------QKNHNKGK 183
Query: 175 XXXXXXXXXANPNIAKEKNKRE--CFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVV 348
N K+KNK E CF CG+ GH+A+ C R + + N V
Sbjct: 184 GKPKSNKPNKTTNFKKKKNKAELTCFACGEAGHFAKDCPDR------ADRRGKKGNVNTV 237
Query: 349 VSGASASEENRQLGKM 396
+ +++EE++ G +
Sbjct: 238 I---ASNEEDKGYGNL 250
>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
Length = 1292
Score = 103 bits (257), Expect(2) = 1e-29
Identities = 47/91 (51%), Positives = 66/91 (72%)
Frame = +3
Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
+G + MGN + A VLG G + LK +SGK +PL +VQHVP + KNL+S +L + GYK
Sbjct: 338 VGRSGALLMGNGSRAHVLGVGTVILKFTSGKTVPLKSVQHVPSIKKNLVSASMLCRDGYK 397
Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFKLNV 656
+V E+N+ V+S +G FVGKGY CGGLF+L++
Sbjct: 398 VVLESNKCVVSKHGTFVGKGYDCGGLFRLSL 428
Score = 53.1 bits (126), Expect(2) = 1e-29
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANLVVGXXXXXXXXXXXXXX 180
FA SLKHK++ ++ +L+ +L +EE ++ +D+ + + AN+V
Sbjct: 176 FATSLKHKRQEFNVEELIGTLDVEERARTKDSGKGVETSTANVVQKRNFRKFNKKKNQNK 235
Query: 181 XXXXXXXANPNIAKEKN-----KRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANV 345
+ K+KN K CFVCG H+AR+C RK + + T++
Sbjct: 236 QENANKPVHTAQFKKKNNNNKGKGGCFVCGSDQHWARECPDRKFTQDKKSANVVTTETEE 295
Query: 346 VVSG 357
SG
Sbjct: 296 GTSG 299
>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
Length = 946
Score = 109 bits (272), Expect(2) = 2e-29
Identities = 56/121 (46%), Positives = 84/121 (69%), Gaps = 6/121 (4%)
Frame = +3
Query: 345 GGIRSFCFRRK-----QTIGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVP 509
G R C +K + I E+V MGN+T +++ G+G++ LK++SGK L L NV +VP
Sbjct: 341 GATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVP 400
Query: 510 DVSKNLISGYLLNKQGYKLVFEANRVVISLNGVFVGKGYACGGLFKLNVAT-ISSSYNKV 686
++ KNL+SG LLN G++LVFE+N+ V+S +G++VGKGY G++KLNV T I S+ NK
Sbjct: 401 EIRKNLVSGSLLNNHGFRLVFESNKFVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKA 460
Query: 687 N 689
+
Sbjct: 461 S 461
Score = 46.6 bits (109), Expect(2) = 2e-29
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSK--NRDAVANEQAAKANLVVGXXXXXXXXXXXX 174
F LKHK++ +S+ DL++ LRIEED++ + V AKAN V
Sbjct: 199 FKNCLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGVHTLNEAKANFVEHGQSSKAKTNNNK 258
Query: 175 XXXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVV 348
+ K K + +CF CGK GH + C P K +ANV+
Sbjct: 259 GKGSKLGPKGGIS-KKPKFQGKCFNCGKQGHKSVDC--------RLPKKNKPKEANVI 307
>gb|AAW57815.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1109
Score = 104 bits (259), Expect(2) = 3e-29
Identities = 48/81 (59%), Positives = 62/81 (76%)
Frame = +3
Query: 402 VTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYKLVFEAN 581
V MGN + A V G G ++LK +SGKI+ L NVQHVP + +NL+SG L K G+KLVFE+N
Sbjct: 292 VLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTKDGFKLVFESN 351
Query: 582 RVVISLNGVFVGKGYACGGLF 644
+VV+S +G F+GKGY CGGLF
Sbjct: 352 KVVVSKHGYFIGKGYECGGLF 372
Score = 51.2 bits (121), Expect(2) = 3e-29
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
F +LKHK++ S+ L+ SL IEE ++ +DA + +++ VV
Sbjct: 161 FGTALKHKRQEYSIEGLIASLDIEEKAREKDAASKGDGGQSSANVVHKAHNKSKGKYKAQ 220
Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
N +++ CFVCG+ GH AR+C +R G+ +P+ ++ NV +
Sbjct: 221 QTTNFKKQKKNNNNPNQDEGTCFVCGQPGHLARKCLQRMGM--KAPAGQTSKFDNVTI 276
>gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1284
Score = 99.8 bits (247), Expect(2) = 6e-29
Identities = 46/86 (53%), Positives = 64/86 (74%)
Frame = +3
Query: 402 VTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYKLVFEAN 581
V MGN + A V G G + LK +SGKI+ L NVQHVP + +NL+SG L + +KLVFE+N
Sbjct: 265 VLMGNGSHASVHGVGTVYLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLIRDRFKLVFESN 324
Query: 582 RVVISLNGVFVGKGYACGGLFKLNVA 659
+VV+S +G F+GKGY CGGLF+ +++
Sbjct: 325 KVVVSKHGYFIGKGYECGGLFRFSLS 350
Score = 54.7 bits (130), Expect(2) = 6e-29
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
F LKHK++ S+ L+ L +EE ++ +DA + +++ V+
Sbjct: 146 FGTVLKHKRQEYSVEGLIAPLDVEEKAREKDAASKGDGGQSSANVMHKAQNKSKGKYKAQ 205
Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQAN 342
N +++R CFVCG+LGH AR+C +RKG+ +P ++ AN
Sbjct: 206 QTTNLKKQKKNNNNPNQDERTCFVCGQLGHLARKCPQRKGM--KAPVGQTSKSAN 258
>gb|ABB47727.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 895
Score = 93.2 bits (230), Expect(2) = 6e-29
Identities = 42/82 (51%), Positives = 59/82 (71%)
Frame = +3
Query: 414 NATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYKLVFEANRVVI 593
N T R +LK +SGKI+ L NVQHVP + +NL+SG L + G+KLVFE+N+VV+
Sbjct: 273 NVTIDNTGDGSRYDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVV 332
Query: 594 SLNGVFVGKGYACGGLFKLNVA 659
S +G F+GKGY CGGLF+ +++
Sbjct: 333 SKHGYFIGKGYECGGLFRFSLS 354
Score = 61.2 bits (147), Expect(2) = 6e-29
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
F +LKHK++ S+ L+ S +EE ++ +DA + +++ VV
Sbjct: 161 FGTTLKHKRQEYSVEGLIASFDVEEKAREKDAASKGDGGQSSTNVVHKAQNKSKGKYKAQ 220
Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
N +++R CFVCG+LGH AR+C +RKG+ +P+ ++ ANV +
Sbjct: 221 QTTNFKKQKKNNNNPNQDERTCFVCGQLGHLARKCPQRKGM--KAPAGQTSKSANVTI 276
>gb|ABA98797.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1243
Score = 93.2 bits (230), Expect(2) = 7e-29
Identities = 45/92 (48%), Positives = 65/92 (70%)
Frame = +3
Query: 402 VTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYKLVFEAN 581
VT+GN G G +LK +SGKI+ L N+QHVP + +NL+SG L + G+KLVFE+N
Sbjct: 274 VTIGNTGD----GSG-YDLKFTSGKIVQLKNMQHVPSIDRNLVSGSRLTRDGFKLVFESN 328
Query: 582 RVVISLNGVFVGKGYACGGLFKLNVATISSSY 677
+VV+S +G F+GKGY CGGLF+ +++ + Y
Sbjct: 329 KVVVSKHGYFIGKGYECGGLFRFSLSDFCNKY 360
Score = 60.8 bits (146), Expect(2) = 7e-29
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
F +LKHK++ S+ L+ SL +EE ++ +DA + +++ VV
Sbjct: 161 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKEKYKAQ 220
Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
N +++R CFVCG++GH AR+C RKG+ +P+ ++ ANV +
Sbjct: 221 QTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPHRKGM--KAPAGQTSKSANVTI 276
>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
vinifera]
Length = 478
Score = 108 bits (269), Expect(2) = 2e-28
Identities = 55/121 (45%), Positives = 84/121 (69%), Gaps = 6/121 (4%)
Frame = +3
Query: 345 GGIRSFCFRRK-----QTIGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVP 509
G R C +K + I E+V MGN+ +++ G+G++ LK++SGK L L NV +VP
Sbjct: 341 GATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVP 400
Query: 510 DVSKNLISGYLLNKQGYKLVFEANRVVISLNGVFVGKGYACGGLFKLNVAT-ISSSYNKV 686
++ KNL+SG LLN G++LVF++N+VV+S +G++VGKGY G++KLNV T I S+ NK
Sbjct: 401 EIRKNLVSGSLLNNHGFRLVFDSNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKA 460
Query: 687 N 689
+
Sbjct: 461 S 461
Score = 44.7 bits (104), Expect(2) = 2e-28
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSK--NRDAVANEQAAKANLVVGXXXXXXXXXXXX 174
F LKHK++ +S+ DL++ LRIEED++ + AKAN V
Sbjct: 199 FKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSNAKTNNNK 258
Query: 175 XXXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVV 348
+ K K + +CF CGK GH + C P K +ANV+
Sbjct: 259 GKGSKLGPKGGIS-KKPKFQGKCFNCGKQGHKSVDC--------RLPKKNKPKEANVI 307
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 108 bits (271), Expect(2) = 3e-28
Identities = 56/121 (46%), Positives = 84/121 (69%), Gaps = 6/121 (4%)
Frame = +3
Query: 345 GGIRSFCFRRK-----QTIGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVP 509
G R C +K + I E+V MGN+T +++ G+G++ LK++SGK L L NV +VP
Sbjct: 341 GATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVP 400
Query: 510 DVSKNLISGYLLNKQGYKLVFEANRVVISLNGVFVGKGYACGGLFKLNVAT-ISSSYNKV 686
++ KNL+ G LLN G++LVFE+N+VV+S +G++VGKGY G++KLNV T I S+ NK
Sbjct: 401 EIRKNLVFGSLLNNHGFRLVFESNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKA 460
Query: 687 N 689
+
Sbjct: 461 S 461
Score = 43.1 bits (100), Expect(2) = 3e-28
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSK--NRDAVANEQAAKANLVVGXXXXXXXXXXXX 174
F LKHK++ +S+ DL++ LRIEED++ + A+AN V
Sbjct: 199 FKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAQANFVEHGQSSKAKTNNNK 258
Query: 175 XXXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVV 348
+ K K + +CF CGK GH + C P K +ANV+
Sbjct: 259 GKGSKLGPKGGIS-KKPKFQGKCFNCGKQGHKSVDC--------RLPKKNKPKEANVI 307
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 107 bits (266), Expect(2) = 4e-28
Identities = 55/121 (45%), Positives = 83/121 (68%), Gaps = 6/121 (4%)
Frame = +3
Query: 345 GGIRSFCFRRK-----QTIGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVP 509
G R C +K + I E+V MGN+ +++ G+G++ LK++SGK L L NV +VP
Sbjct: 341 GATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVP 400
Query: 510 DVSKNLISGYLLNKQGYKLVFEANRVVISLNGVFVGKGYACGGLFKLNVAT-ISSSYNKV 686
++ KNL+SG LLN G++LVF +N+VV+S +G++VGKGY G++KLNV T I S+ NK
Sbjct: 401 EIRKNLVSGSLLNNHGFRLVFXSNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKA 460
Query: 687 N 689
+
Sbjct: 461 S 461
Score = 44.7 bits (104), Expect(2) = 4e-28
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSK--NRDAVANEQAAKANLVVGXXXXXXXXXXXX 174
F LKHK++ +S+ DL++ LRIEED++ + AKAN V
Sbjct: 199 FKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNNK 258
Query: 175 XXXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVV 348
+ K K + +CF CGK GH + C P K +ANV+
Sbjct: 259 GKGSKLGPKGGIS-KKPKFQGKCFNCGKQGHKSVDC--------RLPKKNKPKEANVI 307
>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
Length = 1316
Score = 106 bits (265), Expect(2) = 4e-28
Identities = 54/123 (43%), Positives = 85/123 (69%), Gaps = 8/123 (6%)
Frame = +3
Query: 345 GGIRSFC-----FRRKQTIGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVP 509
G R C F + + ++E + MGN++++K+ G+G++ LK++SGK L L +V HVP
Sbjct: 468 GATRHICSNKWMFSTYKPVEQNEELFMGNSSSSKIEGRGKVILKMTSGKELTLNDVLHVP 527
Query: 510 DVSKNLISGYLLNKQGYKLVFEANRVVISLNGVFVGKGYACGGLFKLNVATI---SSSYN 680
D+ KNL+SG LL+K G+KLVF +++ V++ N +FVGKGY GLFK+NV T+ S + N
Sbjct: 528 DICKNLVSGSLLSKNGFKLVFVSDKFVLTKNEMFVGKGYLSDGLFKMNVMTVVPKSINNN 587
Query: 681 KVN 689
K++
Sbjct: 588 KID 590
Score = 45.1 bits (105), Expect(2) = 4e-28
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVA-NEQAAKANLVVGXXXXXXXXXXXXX 177
F LKHK++ +++ +L+V LRIEED++ + N AKAN++
Sbjct: 369 FKNYLKHKRKEMNLEELIVRLRIEEDNRKSEKKGNNSMEAKANVI-----EQGPKTNKKR 423
Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGH 267
N+AK K K +C+ CGK GH
Sbjct: 424 KHGDQNQNQESNVAK-KFKGKCYNCGKTGH 452
>emb|CAE03908.2| OSJNBb0015G09.2 [Oryza sativa Japonica Group]
Length = 1039
Score = 97.1 bits (240), Expect(2) = 4e-28
Identities = 44/88 (50%), Positives = 62/88 (70%)
Frame = +3
Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
+ + MGN + A V G G ++LK +SGKI+ L NVQHV + +NL+SG L + +K
Sbjct: 311 VARGSTILMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVLSIDRNLVSGSRLTRDRFK 370
Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFK 647
LVFE+N+VV+S +G F+GKGY CGGLF+
Sbjct: 371 LVFESNKVVVSKHGYFIGKGYECGGLFR 398
Score = 54.7 bits (130), Expect(2) = 4e-28
Identities = 35/117 (29%), Positives = 56/117 (47%)
Frame = +1
Query: 1 FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANLVVGXXXXXXXXXXXXXX 180
F +LKHK+ S+ L+VSL +EE + + A + A +
Sbjct: 185 FGTALKHKRREYSIEGLIVSLDVEEKAWEKYAASKGDAQQTT----------------NF 228
Query: 181 XXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
NPN +++R CFVCG+ GH AR+C +RKG+ +P+ ++ ANV +
Sbjct: 229 KKQKKNNNNPN----QDERTCFVCGQPGHLARKCPQRKGM--KAPAGQTSKSANVTI 279