BLASTX nr result

ID: Stemona21_contig00018222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00018222
         (694 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA93966.1| retrotransposon protein, putative, Ty1-copia subc...   106   3e-33
gb|AAV59441.1| putative polyprotein [Oryza sativa Japonica Group]     103   3e-32
gb|AAV31347.1| putative polyprotein [Oryza sativa Japonica Group]     103   3e-32
gb|AAT69624.1| putative polyprotein [Oryza sativa Japonica Group]     105   6e-32
gb|AAT44242.1| putative ubiquitin carrier protein [Oryza sativa ...   104   6e-32
gb|ABA93737.1| retrotransposon protein, putative, Ty1-copia subc...   105   1e-30
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16...   105   4e-30
gb|AAL83348.1|AC074282_15 Putative gag-pol polyprotein [Oryza sa...   100   5e-30
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]                       101   9e-30
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]   103   1e-29
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   109   2e-29
gb|AAW57815.1| putative polyprotein [Oryza sativa Japonica Group]     104   3e-29
gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subc...   100   6e-29
gb|ABB47727.2| retrotransposon protein, putative, Ty1-copia subc...    93   6e-29
gb|ABA98797.2| retrotransposon protein, putative, Ty1-copia subc...    93   7e-29
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854...   108   2e-28
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   108   3e-28
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   107   4e-28
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   106   4e-28
emb|CAE03908.2| OSJNBb0015G09.2 [Oryza sativa Japonica Group]          97   4e-28

>gb|ABA93966.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1212

 Score =  106 bits (264), Expect(2) = 3e-33
 Identities = 48/95 (50%), Positives = 68/95 (71%)
 Frame = +3

Query: 375 KQTIGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQ 554
           +  +     V MGN + A V G G ++LK +SGKI+ L NVQHVP + +NL+SG  L + 
Sbjct: 305 RANVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRD 364

Query: 555 GYKLVFEANRVVISLNGVFVGKGYACGGLFKLNVA 659
           G+KLVFE+N+VVIS +G F+GKGY CGGLF+ +++
Sbjct: 365 GFKLVFESNKVVISKHGYFIGKGYECGGLFRFSLS 399



 Score = 62.4 bits (150), Expect(2) = 3e-33
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
           F  +LKHK++  S+  L+ SL +EE ++ +DA +     ++N  VV              
Sbjct: 161 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSNANVVHKAQNKSKGKYKAQ 220

Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
                      N    +++R CFVCG+ GH AR+C +RKG+   +P++ +   ANV +
Sbjct: 221 QTTNFKKQKKNNNNPNQDERTCFVCGQPGHLARKCPQRKGM--KAPARQTYKSANVTI 276


>gb|AAV59441.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1225

 Score =  103 bits (258), Expect(2) = 3e-32
 Identities = 49/102 (48%), Positives = 69/102 (67%)
 Frame = +3

Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
           +     V MGN + A V G G ++L  +SGKI+ L NVQHVP + +NL+SG  L + G+K
Sbjct: 300 VARGSTVLMGNGSHASVHGVGMVDLMFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFK 359

Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFKLNVATISSSYNKVN 689
           LVFE+N+VV+S +G F+GKGY CGGLF+ +++     Y  VN
Sbjct: 360 LVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDF--CYKSVN 399



 Score = 61.6 bits (148), Expect(2) = 3e-32
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
           F  +LKHK++  S+  L+ SL +EE ++ +DA +     +++  VV              
Sbjct: 161 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQ 220

Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
                      N    +++R CFVCG++GH AR+C +RKG+   +P+  ++  ANV +
Sbjct: 221 QTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM--KAPAGQTSKSANVTI 276


>gb|AAV31347.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1059

 Score =  103 bits (258), Expect(2) = 3e-32
 Identities = 46/92 (50%), Positives = 67/92 (72%)
 Frame = +3

Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
           +     V MGN + A V G G ++LK +SGKI+ L NVQHVP + +NL+SG  L + G+K
Sbjct: 431 VARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFK 490

Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFKLNVA 659
           LVFE+N+VV+S +G F+GKG+ CGGLF+ +++
Sbjct: 491 LVFESNKVVVSKHGYFIGKGFECGGLFRFSLS 522



 Score = 61.6 bits (148), Expect(2) = 3e-32
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
           F  +LKHK++  S+  L+ SL +EE ++ +DA +     +++  VV              
Sbjct: 284 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQ 343

Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
                      N    +++R CFVCG++GH AR+C +RKG+   +P+  ++  ANV +
Sbjct: 344 QTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGM--KAPAGQTSKSANVTI 399


>gb|AAT69624.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1401

 Score =  105 bits (263), Expect(2) = 6e-32
 Identities = 49/102 (48%), Positives = 72/102 (70%)
 Frame = +3

Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
           +G    + MGN + A V G G ++LK +SGK + L NVQHVP + KNL+SG LL ++G++
Sbjct: 457 VGRGSSLLMGNGSLAAVHGVGTVDLKFTSGKTVQLKNVQHVPSIKKNLVSGSLLCREGFR 516

Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFKLNVATISSSYNKVN 689
           LVFE+N+ V+S  G FVGKGY  GGLF+ ++  + +++N VN
Sbjct: 517 LVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMCNNHNAVN 558



 Score = 58.5 bits (140), Expect(2) = 6e-32
 Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVAN--EQAAKANLVVGXXXXXXXXXXXX 174
           FA SLKHK++  S+PDL+ SL +EE ++ +D      E  + AN+V              
Sbjct: 313 FATSLKHKRQEFSVPDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKV 372

Query: 175 XXXXXXXXXAN-PNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
                     N     K K K +CFVCGK GH+A+ C          P       AN+++
Sbjct: 373 KPDVKPKAATNFKKKGKGKTKGDCFVCGKSGHWAKDC----------PECKDRKSANMII 422

Query: 352 S 354
           S
Sbjct: 423 S 423


>gb|AAT44242.1| putative ubiquitin carrier protein [Oryza sativa Japonica Group]
          Length = 974

 Score =  104 bits (259), Expect(2) = 6e-32
 Identities = 47/92 (51%), Positives = 66/92 (71%)
 Frame = +3

Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
           +     V MGN + A V G G + LK +SGKI+ L NVQHVP + +NL+SG  L + G+K
Sbjct: 265 VARGSTVLMGNGSHASVHGVGTVYLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFK 324

Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFKLNVA 659
           LVFE+N+VV+S +G F+GKGY CGGLF+ +++
Sbjct: 325 LVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 356



 Score = 60.1 bits (144), Expect(2) = 6e-32
 Identities = 33/117 (28%), Positives = 58/117 (49%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANLVVGXXXXXXXXXXXXXX 180
           F  +LKHK++  S+  L+ SL +EE ++ +DA +     ++                   
Sbjct: 147 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSTA----------------- 189

Query: 181 XXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
                   N N    +++R CFVCG+ GH AR+C +RKG+   +P++ ++  ANV +
Sbjct: 190 -----NKKNNNNNPNQDERTCFVCGQPGHLARKCPQRKGM--KAPAEQTSKSANVTI 239


>gb|ABA93737.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1579

 Score =  105 bits (262), Expect(2) = 1e-30
 Identities = 47/92 (51%), Positives = 67/92 (72%)
 Frame = +3

Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
           +     V MGN + A V G G ++LK +SGKI+ L NVQHVP + +NL+SG  L + G+K
Sbjct: 608 VARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFK 667

Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFKLNVA 659
           LVFE+N+VV+S +G F+GKGY CGGLF+ +++
Sbjct: 668 LVFESNKVVVSKHGYFIGKGYECGGLFRFSLS 699



 Score = 54.7 bits (130), Expect(2) = 1e-30
 Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
           F  + K+K++  S+  L+ SL +EE ++ +DA +     +++  VV              
Sbjct: 461 FGTAFKYKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQ 520

Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
                      N    +++R CFVCG++ H AR+C +RKG+   +P+  ++  ANV +
Sbjct: 521 QTTNFKKQKKNNNNPNQDERTCFVCGQVRHLARKCPQRKGM--KAPAGQTSKSANVTI 576


>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
           gag/pol protein [Zea mays]
          Length = 1279

 Score =  105 bits (261), Expect(2) = 4e-30
 Identities = 50/103 (48%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
 Frame = +3

Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
           +G    + MGN + A VLG G + LK +SGK +PL +VQHVP + KNL+S  +L + GYK
Sbjct: 298 VGRSGALLMGNGSRAHVLGVGTVILKFTSGKTVPLKSVQHVPSIKKNLVSASMLCRDGYK 357

Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFKLNVATISSS-YNKVN 689
           +V E+N+ V+S +G FVGKGY CGGLF+L++  + +   N VN
Sbjct: 358 VVLESNKCVVSKHGTFVGKGYECGGLFRLSLHDVCNKLVNSVN 400



 Score = 53.1 bits (126), Expect(2) = 4e-30
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANLVVGXXXXXXXXXXXXXX 180
           FA SLKHK++  ++ +L+ +L +EE ++ +D+    + + AN+V                
Sbjct: 136 FATSLKHKRQEFNVEELIGTLDVEERARTKDSGKGVETSTANVVQKRNFRKFNKKKNQNK 195

Query: 181 XXXXXXXANPNIAKEKN-----KRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANV 345
                   +    K+KN     K  CFVCG   H+AR+C  RK   +   +   T++   
Sbjct: 196 PENANKPVHTAQFKKKNNNNKGKGGCFVCGSDQHWARECPDRKFTQDKKSANVVTTETEE 255

Query: 346 VVSG 357
             SG
Sbjct: 256 GTSG 259


>gb|AAL83348.1|AC074282_15 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|31429942|gb|AAP51926.1| retrotransposon protein,
           putative, Ty1-copia subclass, expressed [Oryza sativa
           Japonica Group]
          Length = 1109

 Score = 99.8 bits (247), Expect(2) = 5e-30
 Identities = 47/94 (50%), Positives = 68/94 (72%)
 Frame = +3

Query: 408 MGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYKLVFEANRV 587
           MGN + A V G G ++LK +SGK + L NVQHVP + KNL+SG LL ++G++LVFE+N+ 
Sbjct: 417 MGNRSLAAVHGVGTVDLKFTSGKTMQLKNVQHVPSIKKNLVSGSLLCREGFRLVFESNKC 476

Query: 588 VISLNGVFVGKGYACGGLFKLNVATISSSYNKVN 689
           V+S    FVGKGY  GGLF+ ++  + +++N VN
Sbjct: 477 VVSKYETFVGKGYDSGGLFRFSLNDMCNNHNVVN 510



 Score = 58.2 bits (139), Expect(2) = 5e-30
 Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVAN--EQAAKANLVVGXXXXXXXXXXXX 174
           FA SLKHK++  S+ DL+ SL +EE ++ +D      E  + AN+V              
Sbjct: 266 FATSLKHKRQEFSVSDLIGSLGVEEKARAKDVRGKKVEGGSSANMVQKKNPHASHNNKKV 325

Query: 175 XXXXXXXXXAN-PNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
                     N     K K K +CFVCGK GH+A+ C +RK          +   AN+VV
Sbjct: 326 KPDVKPKAATNFKKKGKGKAKGDCFVCGKSGHWAKDCPERK----------NRKSANMVV 375

Query: 352 S 354
           S
Sbjct: 376 S 376


>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
          Length = 1264

 Score =  101 bits (252), Expect(2) = 9e-30
 Identities = 46/88 (52%), Positives = 65/88 (73%)
 Frame = +3

Query: 393 DERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYKLVF 572
           D  V MGN + A V G G ++LK +SGKI+ L NV HVP + KNL+SG LL + G+K+V 
Sbjct: 287 DSSVLMGNGSHASVHGTGTVDLKFTSGKIVQLKNVHHVPSIHKNLVSGTLLCRDGFKVVL 346

Query: 573 EANRVVISLNGVFVGKGYACGGLFKLNV 656
           E+N++V+S +G F+GKGY CGGLF+ ++
Sbjct: 347 ESNKLVVSKSGQFIGKGYDCGGLFRFSL 374



 Score = 55.5 bits (132), Expect(2) = 9e-30
 Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRD--AVANEQAAKANLVVGXXXXXXXXXXXX 174
           FA +LKHK++ IS+ +L+ SL +EE ++ +D  +   E  + AN+V              
Sbjct: 130 FATALKHKRQEISVENLIASLDVEEKARAKDTGSKGGEGHSSANMV------QKNHNKGK 183

Query: 175 XXXXXXXXXANPNIAKEKNKRE--CFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVV 348
                       N  K+KNK E  CF CG+ GH+A+ C  R      +  +      N V
Sbjct: 184 GKPKSNKPNKTTNFKKKKNKAELTCFACGEAGHFAKDCPDR------ADRRGKKGNVNTV 237

Query: 349 VSGASASEENRQLGKM 396
           +   +++EE++  G +
Sbjct: 238 I---ASNEEDKGYGNL 250


>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
          Length = 1292

 Score =  103 bits (257), Expect(2) = 1e-29
 Identities = 47/91 (51%), Positives = 66/91 (72%)
 Frame = +3

Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
           +G    + MGN + A VLG G + LK +SGK +PL +VQHVP + KNL+S  +L + GYK
Sbjct: 338 VGRSGALLMGNGSRAHVLGVGTVILKFTSGKTVPLKSVQHVPSIKKNLVSASMLCRDGYK 397

Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFKLNV 656
           +V E+N+ V+S +G FVGKGY CGGLF+L++
Sbjct: 398 VVLESNKCVVSKHGTFVGKGYDCGGLFRLSL 428



 Score = 53.1 bits (126), Expect(2) = 1e-29
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANLVVGXXXXXXXXXXXXXX 180
           FA SLKHK++  ++ +L+ +L +EE ++ +D+    + + AN+V                
Sbjct: 176 FATSLKHKRQEFNVEELIGTLDVEERARTKDSGKGVETSTANVVQKRNFRKFNKKKNQNK 235

Query: 181 XXXXXXXANPNIAKEKN-----KRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANV 345
                   +    K+KN     K  CFVCG   H+AR+C  RK   +   +   T++   
Sbjct: 236 QENANKPVHTAQFKKKNNNNKGKGGCFVCGSDQHWARECPDRKFTQDKKSANVVTTETEE 295

Query: 346 VVSG 357
             SG
Sbjct: 296 GTSG 299


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  109 bits (272), Expect(2) = 2e-29
 Identities = 56/121 (46%), Positives = 84/121 (69%), Gaps = 6/121 (4%)
 Frame = +3

Query: 345 GGIRSFCFRRK-----QTIGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVP 509
           G  R  C  +K     + I   E+V MGN+T +++ G+G++ LK++SGK L L NV +VP
Sbjct: 341 GATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVP 400

Query: 510 DVSKNLISGYLLNKQGYKLVFEANRVVISLNGVFVGKGYACGGLFKLNVAT-ISSSYNKV 686
           ++ KNL+SG LLN  G++LVFE+N+ V+S +G++VGKGY   G++KLNV T I S+ NK 
Sbjct: 401 EIRKNLVSGSLLNNHGFRLVFESNKFVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKA 460

Query: 687 N 689
           +
Sbjct: 461 S 461



 Score = 46.6 bits (109), Expect(2) = 2e-29
 Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSK--NRDAVANEQAAKANLVVGXXXXXXXXXXXX 174
           F   LKHK++ +S+ DL++ LRIEED++   +  V     AKAN V              
Sbjct: 199 FKNCLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGVHTLNEAKANFVEHGQSSKAKTNNNK 258

Query: 175 XXXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVV 348
                       +  K K + +CF CGK GH +  C          P K    +ANV+
Sbjct: 259 GKGSKLGPKGGIS-KKPKFQGKCFNCGKQGHKSVDC--------RLPKKNKPKEANVI 307


>gb|AAW57815.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1109

 Score =  104 bits (259), Expect(2) = 3e-29
 Identities = 48/81 (59%), Positives = 62/81 (76%)
 Frame = +3

Query: 402 VTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYKLVFEAN 581
           V MGN + A V G G ++LK +SGKI+ L NVQHVP + +NL+SG  L K G+KLVFE+N
Sbjct: 292 VLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTKDGFKLVFESN 351

Query: 582 RVVISLNGVFVGKGYACGGLF 644
           +VV+S +G F+GKGY CGGLF
Sbjct: 352 KVVVSKHGYFIGKGYECGGLF 372



 Score = 51.2 bits (121), Expect(2) = 3e-29
 Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
           F  +LKHK++  S+  L+ SL IEE ++ +DA +     +++  VV              
Sbjct: 161 FGTALKHKRQEYSIEGLIASLDIEEKAREKDAASKGDGGQSSANVVHKAHNKSKGKYKAQ 220

Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
                      N    +++  CFVCG+ GH AR+C +R G+   +P+  ++   NV +
Sbjct: 221 QTTNFKKQKKNNNNPNQDEGTCFVCGQPGHLARKCLQRMGM--KAPAGQTSKFDNVTI 276


>gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1284

 Score = 99.8 bits (247), Expect(2) = 6e-29
 Identities = 46/86 (53%), Positives = 64/86 (74%)
 Frame = +3

Query: 402 VTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYKLVFEAN 581
           V MGN + A V G G + LK +SGKI+ L NVQHVP + +NL+SG  L +  +KLVFE+N
Sbjct: 265 VLMGNGSHASVHGVGTVYLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLIRDRFKLVFESN 324

Query: 582 RVVISLNGVFVGKGYACGGLFKLNVA 659
           +VV+S +G F+GKGY CGGLF+ +++
Sbjct: 325 KVVVSKHGYFIGKGYECGGLFRFSLS 350



 Score = 54.7 bits (130), Expect(2) = 6e-29
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
           F   LKHK++  S+  L+  L +EE ++ +DA +     +++  V+              
Sbjct: 146 FGTVLKHKRQEYSVEGLIAPLDVEEKAREKDAASKGDGGQSSANVMHKAQNKSKGKYKAQ 205

Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQAN 342
                      N    +++R CFVCG+LGH AR+C +RKG+   +P   ++  AN
Sbjct: 206 QTTNLKKQKKNNNNPNQDERTCFVCGQLGHLARKCPQRKGM--KAPVGQTSKSAN 258


>gb|ABB47727.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 895

 Score = 93.2 bits (230), Expect(2) = 6e-29
 Identities = 42/82 (51%), Positives = 59/82 (71%)
 Frame = +3

Query: 414 NATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYKLVFEANRVVI 593
           N T        R +LK +SGKI+ L NVQHVP + +NL+SG  L + G+KLVFE+N+VV+
Sbjct: 273 NVTIDNTGDGSRYDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVV 332

Query: 594 SLNGVFVGKGYACGGLFKLNVA 659
           S +G F+GKGY CGGLF+ +++
Sbjct: 333 SKHGYFIGKGYECGGLFRFSLS 354



 Score = 61.2 bits (147), Expect(2) = 6e-29
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
           F  +LKHK++  S+  L+ S  +EE ++ +DA +     +++  VV              
Sbjct: 161 FGTTLKHKRQEYSVEGLIASFDVEEKAREKDAASKGDGGQSSTNVVHKAQNKSKGKYKAQ 220

Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
                      N    +++R CFVCG+LGH AR+C +RKG+   +P+  ++  ANV +
Sbjct: 221 QTTNFKKQKKNNNNPNQDERTCFVCGQLGHLARKCPQRKGM--KAPAGQTSKSANVTI 276


>gb|ABA98797.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1243

 Score = 93.2 bits (230), Expect(2) = 7e-29
 Identities = 45/92 (48%), Positives = 65/92 (70%)
 Frame = +3

Query: 402 VTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYKLVFEAN 581
           VT+GN       G G  +LK +SGKI+ L N+QHVP + +NL+SG  L + G+KLVFE+N
Sbjct: 274 VTIGNTGD----GSG-YDLKFTSGKIVQLKNMQHVPSIDRNLVSGSRLTRDGFKLVFESN 328

Query: 582 RVVISLNGVFVGKGYACGGLFKLNVATISSSY 677
           +VV+S +G F+GKGY CGGLF+ +++   + Y
Sbjct: 329 KVVVSKHGYFIGKGYECGGLFRFSLSDFCNKY 360



 Score = 60.8 bits (146), Expect(2) = 7e-29
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANL-VVGXXXXXXXXXXXXX 177
           F  +LKHK++  S+  L+ SL +EE ++ +DA +     +++  VV              
Sbjct: 161 FGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKAQNKSKEKYKAQ 220

Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
                      N    +++R CFVCG++GH AR+C  RKG+   +P+  ++  ANV +
Sbjct: 221 QTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPHRKGM--KAPAGQTSKSANVTI 276


>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
           vinifera]
          Length = 478

 Score =  108 bits (269), Expect(2) = 2e-28
 Identities = 55/121 (45%), Positives = 84/121 (69%), Gaps = 6/121 (4%)
 Frame = +3

Query: 345 GGIRSFCFRRK-----QTIGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVP 509
           G  R  C  +K     + I   E+V MGN+  +++ G+G++ LK++SGK L L NV +VP
Sbjct: 341 GATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVP 400

Query: 510 DVSKNLISGYLLNKQGYKLVFEANRVVISLNGVFVGKGYACGGLFKLNVAT-ISSSYNKV 686
           ++ KNL+SG LLN  G++LVF++N+VV+S +G++VGKGY   G++KLNV T I S+ NK 
Sbjct: 401 EIRKNLVSGSLLNNHGFRLVFDSNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKA 460

Query: 687 N 689
           +
Sbjct: 461 S 461



 Score = 44.7 bits (104), Expect(2) = 2e-28
 Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSK--NRDAVANEQAAKANLVVGXXXXXXXXXXXX 174
           F   LKHK++ +S+ DL++ LRIEED++   +        AKAN V              
Sbjct: 199 FKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSNAKTNNNK 258

Query: 175 XXXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVV 348
                       +  K K + +CF CGK GH +  C          P K    +ANV+
Sbjct: 259 GKGSKLGPKGGIS-KKPKFQGKCFNCGKQGHKSVDC--------RLPKKNKPKEANVI 307


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  108 bits (271), Expect(2) = 3e-28
 Identities = 56/121 (46%), Positives = 84/121 (69%), Gaps = 6/121 (4%)
 Frame = +3

Query: 345 GGIRSFCFRRK-----QTIGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVP 509
           G  R  C  +K     + I   E+V MGN+T +++ G+G++ LK++SGK L L NV +VP
Sbjct: 341 GATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVP 400

Query: 510 DVSKNLISGYLLNKQGYKLVFEANRVVISLNGVFVGKGYACGGLFKLNVAT-ISSSYNKV 686
           ++ KNL+ G LLN  G++LVFE+N+VV+S +G++VGKGY   G++KLNV T I S+ NK 
Sbjct: 401 EIRKNLVFGSLLNNHGFRLVFESNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKA 460

Query: 687 N 689
           +
Sbjct: 461 S 461



 Score = 43.1 bits (100), Expect(2) = 3e-28
 Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSK--NRDAVANEQAAKANLVVGXXXXXXXXXXXX 174
           F   LKHK++ +S+ DL++ LRIEED++   +        A+AN V              
Sbjct: 199 FKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAQANFVEHGQSSKAKTNNNK 258

Query: 175 XXXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVV 348
                       +  K K + +CF CGK GH +  C          P K    +ANV+
Sbjct: 259 GKGSKLGPKGGIS-KKPKFQGKCFNCGKQGHKSVDC--------RLPKKNKPKEANVI 307


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  107 bits (266), Expect(2) = 4e-28
 Identities = 55/121 (45%), Positives = 83/121 (68%), Gaps = 6/121 (4%)
 Frame = +3

Query: 345 GGIRSFCFRRK-----QTIGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVP 509
           G  R  C  +K     + I   E+V MGN+  +++ G+G++ LK++SGK L L NV +VP
Sbjct: 341 GATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVP 400

Query: 510 DVSKNLISGYLLNKQGYKLVFEANRVVISLNGVFVGKGYACGGLFKLNVAT-ISSSYNKV 686
           ++ KNL+SG LLN  G++LVF +N+VV+S +G++VGKGY   G++KLNV T I S+ NK 
Sbjct: 401 EIRKNLVSGSLLNNHGFRLVFXSNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKA 460

Query: 687 N 689
           +
Sbjct: 461 S 461



 Score = 44.7 bits (104), Expect(2) = 4e-28
 Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSK--NRDAVANEQAAKANLVVGXXXXXXXXXXXX 174
           F   LKHK++ +S+ DL++ LRIEED++   +        AKAN V              
Sbjct: 199 FKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNNK 258

Query: 175 XXXXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVV 348
                       +  K K + +CF CGK GH +  C          P K    +ANV+
Sbjct: 259 GKGSKLGPKGGIS-KKPKFQGKCFNCGKQGHKSVDC--------RLPKKNKPKEANVI 307


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  106 bits (265), Expect(2) = 4e-28
 Identities = 54/123 (43%), Positives = 85/123 (69%), Gaps = 8/123 (6%)
 Frame = +3

Query: 345 GGIRSFC-----FRRKQTIGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVP 509
           G  R  C     F   + + ++E + MGN++++K+ G+G++ LK++SGK L L +V HVP
Sbjct: 468 GATRHICSNKWMFSTYKPVEQNEELFMGNSSSSKIEGRGKVILKMTSGKELTLNDVLHVP 527

Query: 510 DVSKNLISGYLLNKQGYKLVFEANRVVISLNGVFVGKGYACGGLFKLNVATI---SSSYN 680
           D+ KNL+SG LL+K G+KLVF +++ V++ N +FVGKGY   GLFK+NV T+   S + N
Sbjct: 528 DICKNLVSGSLLSKNGFKLVFVSDKFVLTKNEMFVGKGYLSDGLFKMNVMTVVPKSINNN 587

Query: 681 KVN 689
           K++
Sbjct: 588 KID 590



 Score = 45.1 bits (105), Expect(2) = 4e-28
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVA-NEQAAKANLVVGXXXXXXXXXXXXX 177
           F   LKHK++ +++ +L+V LRIEED++  +    N   AKAN++               
Sbjct: 369 FKNYLKHKRKEMNLEELIVRLRIEEDNRKSEKKGNNSMEAKANVI-----EQGPKTNKKR 423

Query: 178 XXXXXXXXANPNIAKEKNKRECFVCGKLGH 267
                      N+AK K K +C+ CGK GH
Sbjct: 424 KHGDQNQNQESNVAK-KFKGKCYNCGKTGH 452


>emb|CAE03908.2| OSJNBb0015G09.2 [Oryza sativa Japonica Group]
          Length = 1039

 Score = 97.1 bits (240), Expect(2) = 4e-28
 Identities = 44/88 (50%), Positives = 62/88 (70%)
 Frame = +3

Query: 384 IGEDERVTMGNATAAKVLGKGRINLKLSSGKILPLYNVQHVPDVSKNLISGYLLNKQGYK 563
           +     + MGN + A V G G ++LK +SGKI+ L NVQHV  + +NL+SG  L +  +K
Sbjct: 311 VARGSTILMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVLSIDRNLVSGSRLTRDRFK 370

Query: 564 LVFEANRVVISLNGVFVGKGYACGGLFK 647
           LVFE+N+VV+S +G F+GKGY CGGLF+
Sbjct: 371 LVFESNKVVVSKHGYFIGKGYECGGLFR 398



 Score = 54.7 bits (130), Expect(2) = 4e-28
 Identities = 35/117 (29%), Positives = 56/117 (47%)
 Frame = +1

Query: 1   FAMSLKHKKESISMPDLVVSLRIEEDSKNRDAVANEQAAKANLVVGXXXXXXXXXXXXXX 180
           F  +LKHK+   S+  L+VSL +EE +  + A +   A +                    
Sbjct: 185 FGTALKHKRREYSIEGLIVSLDVEEKAWEKYAASKGDAQQTT----------------NF 228

Query: 181 XXXXXXXANPNIAKEKNKRECFVCGKLGHYARQCGKRKGIHNSSPSKASTSQANVVV 351
                   NPN    +++R CFVCG+ GH AR+C +RKG+   +P+  ++  ANV +
Sbjct: 229 KKQKKNNNNPN----QDERTCFVCGQPGHLARKCPQRKGM--KAPAGQTSKSANVTI 279


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