BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00018203
         (713 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]   324   2e-86
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]   319   5e-85
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   258   2e-66
emb|CAN65308.1| hypothetical protein VITISV_002323 [Vitis vinifera]   246   4e-63
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]   241   2e-61
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]   236   7e-60
emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]   235   1e-59
emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]   235   1e-59
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]   234   2e-59
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]   230   4e-58
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   213   4e-53
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   213   5e-53
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...   211   2e-52
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   207   3e-51
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...   206   6e-51
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   204   3e-50
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...   203   4e-50
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   202   9e-50
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   202   1e-49
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   199   7e-49

>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score =  324 bits (831), Expect = 2e-86
 Identities = 153/231 (66%), Positives = 181/231 (78%)
 Frame = +2

Query: 20   RDVDTRRTIGLGKHFNGLYYLTPSQNPHLVNHITHSSGLWHRRLGHPSAAPLHSLSQSFP 199
            +D  TR+TIGLGK  NGLYYL   QNP L   I   S LWH+RLGHPS+ PL  L++  P
Sbjct: 500  QDATTRKTIGLGKQHNGLYYLAQDQNPALAYAIHKHSDLWHQRLGHPSSGPLQVLAKVNP 559

Query: 200  EIVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIHTHFGARYFLTII 379
            +I F+SKHVC+ICPL KQTRLSF  S I + AP DLIHCDIWGPH+I++H GA YFLTI+
Sbjct: 560  KIYFDSKHVCDICPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGAXYFLTIV 619

Query: 380  YDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEFTSMRPFLDEHGT 559
             D TRYTW++LM+FKS+TQ IL+SF SWV+ QF+R IK LR DNG E +SM+ +LD  G 
Sbjct: 620  DDHTRYTWIHLMSFKSETQGILQSFISWVETQFNRCIKTLRTDNGTEISSMKQYLDTKGI 679

Query: 560  IFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTACYL 712
             + H+C +TPQQNGVVE KHRHLLNV RALRFQANL L+FWGESIQTACYL
Sbjct: 680  NYHHSCAYTPQQNGVVERKHRHLLNVGRALRFQANLPLKFWGESIQTACYL 730


>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
          Length = 1039

 Score =  319 bits (818), Expect = 5e-85
 Identities = 152/231 (65%), Positives = 179/231 (77%)
 Frame = +2

Query: 20  RDVDTRRTIGLGKHFNGLYYLTPSQNPHLVNHITHSSGLWHRRLGHPSAAPLHSLSQSFP 199
           +D  TR+T GLGK  NGLYYL   QNP L   I   S LWH+RLGHPS+ PL  L++   
Sbjct: 92  QDATTRKTXGLGKQHNGLYYLAQDQNPALAYAIHKHSDLWHQRLGHPSSGPLQVLAKVNX 151

Query: 200 EIVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIHTHFGARYFLTII 379
           EI F+SKHVC+I PL KQTRLSF  S I + AP DLIHCDIWGPH+I++H GARYFLTI+
Sbjct: 152 EIYFDSKHVCDIXPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGARYFLTIV 211

Query: 380 YDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEFTSMRPFLDEHGT 559
            D TRYTW++LM+FKS+TQ IL+SF SWV+ QF+R IK LR DNG E +SM+ +LD  G 
Sbjct: 212 DDHTRYTWIHLMSFKSETQGILQSFISWVETQFNRCIKTLRTDNGTEISSMKQYLDTKGI 271

Query: 560 IFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTACYL 712
            + H+C +TPQQNGVVE KHRHLLNV RALRFQANL L+FWGESIQTACYL
Sbjct: 272 NYHHSCAYTPQQNGVVERKHRHLLNVGRALRFQANLPLKFWGESIQTACYL 322


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  258 bits (658), Expect = 2e-66
 Identities = 124/237 (52%), Positives = 160/237 (67%)
 Frame = +2

Query: 2    PSSAAPRDVDTRRTIGLGKHFNGLYYLTPSQNPHLVNHITHSSGLWHRRLGHPSAAPLHS 181
            P     +D+ + + IG GK   GLYY+ PS N  +V H++  S LWH RLGHPS +    
Sbjct: 725  PDYCILQDLVSGKMIGSGKQRGGLYYMHPSTNKSVVFHVSQPSDLWHLRLGHPSFSRFKL 784

Query: 182  LSQSFPEIVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIHTHFGAR 361
            LS+  P+I     + C ICP  KQTRL F  SSI T  P  L+HCD+WGPHKI  H G+R
Sbjct: 785  LSRLLPDIHKEIGNHCPICPQAKQTRLPFPKSSITTKFPFSLLHCDVWGPHKIPAHTGSR 844

Query: 362  YFLTIIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEFTSMRPF 541
            YFLTI+ DF+R TW++LM  KS+TQS+L +F  +VK QF  D++ +R DNG EF  +R F
Sbjct: 845  YFLTIVDDFSRCTWIFLMHHKSETQSLLTNFVQFVKTQFHTDVQTVRMDNGTEFIPLRIF 904

Query: 542  LDEHGTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTACYL 712
            L   G   Q +C++TPQQNGVVE KHRH+LNVAR+L FQ+N+ L+FWGE + TA YL
Sbjct: 905  LQNKGIELQTSCIYTPQQNGVVERKHRHILNVARSLMFQSNVPLEFWGECVLTAVYL 961


>emb|CAN65308.1| hypothetical protein VITISV_002323 [Vitis vinifera]
          Length = 1114

 Score =  246 bits (629), Expect = 4e-63
 Identities = 119/230 (51%), Positives = 158/230 (68%)
 Frame = +2

Query: 23   DVDTRRTIGLGKHFNGLYYLTPSQNPHLVNHITHSSGLWHRRLGHPSAAPLHSLSQSFPE 202
            D+ TR TIGLG+  + LYYL  SQ       +T S+ LWHRRLGH S++ L+ +++    
Sbjct: 365  DLTTRTTIGLGEQRDXLYYLVASQ-------VTSSTALWHRRLGHLSSSRLNFMAKHLLN 417

Query: 203  IVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIHTHFGARYFLTIIY 382
              F S + C++C L KQ RL    SSI +  P +LIHCDIWGP+KI +  GA+YFLTI+ 
Sbjct: 418  FPFQSNNACDVCALAKQRRLPISVSSISSVRPFELIHCDIWGPYKIASLSGAKYFLTIVD 477

Query: 383  DFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEFTSMRPFLDEHGTI 562
            D++R+TWV+ M  KS+TQ +L +FFS+V+ QF   I  +R DNGGEF SMR F  + GT 
Sbjct: 478  DYSRFTWVFFMHHKSETQHLLVNFFSFVQTQFHVSIANIRVDNGGEFFSMREFFKQKGTT 537

Query: 563  FQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTACYL 712
            +QH+CV+TPQQNGVVE KHRH+L  ARA RFQA+L L FW E + T  ++
Sbjct: 538  YQHSCVYTPQQNGVVERKHRHILESARAFRFQAHLPLPFWAECVSTXVHI 587


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score =  241 bits (614), Expect = 2e-61
 Identities = 121/244 (49%), Positives = 156/244 (63%), Gaps = 13/244 (5%)
 Frame = +2

Query: 20   RDVDTRRTIGLGKHFNGLYYL-------------TPSQNPHLVNHITHSSGLWHRRLGHP 160
            +D+ TRR IGLGK  +GLYYL             +    P   N  T S+ LWH RLGH 
Sbjct: 496  QDLATRRMIGLGKQRDGLYYLAALTTNKTETNSYSSPNRPPTCNLTTSSTDLWHSRLGHV 555

Query: 161  SAAPLHSLSQSFPEIVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKI 340
            S + L  ++++F        + C IC L KQ RL F  S I +  P DLIHCDIWG +K 
Sbjct: 556  SHSRLSFIAKNFLNFSIQFNNDCPICLLAKQHRLPFGTSEISSEKPFDLIHCDIWGRYKH 615

Query: 341  HTHFGARYFLTIIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGE 520
             +  GA YFLTI+ D+TR+TW++LM  K + Q ++K FFS+V  QF   IKI R+DNGGE
Sbjct: 616  SSLSGAHYFLTIVDDYTRFTWIFLMKHKDEAQPLIKHFFSYVSTQFASHIKIFRSDNGGE 675

Query: 521  FTSMRPFLDEHGTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQT 700
            F S++ F  ++G +FQH+CV+TPQQNGVVE KHRH+L VARAL+FQA L  QFWGE   T
Sbjct: 676  FLSLQSFFKDNGVLFQHSCVYTPQQNGVVERKHRHILQVARALKFQAQLPTQFWGECALT 735

Query: 701  ACYL 712
            A ++
Sbjct: 736  AVHI 739


>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
          Length = 1125

 Score =  236 bits (601), Expect = 7e-60
 Identities = 118/246 (47%), Positives = 160/246 (65%), Gaps = 15/246 (6%)
 Frame = +2

Query: 20  RDVDTRRTIGLGKHFNGLYYLTP-------SQNPHLV--------NHITHSSGLWHRRLG 154
           +D+ TR TIGLG+  +GLYYL         +Q P           + +T S+ LWHRRLG
Sbjct: 199 QDLTTRTTIGLGEQRDGLYYLVALASEKPKTQTPSAATTSCRSPSSQVTSSTALWHRRLG 258

Query: 155 HPSAAPLHSLSQSFPEIVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPH 334
           H S++ L  +++      F S + C++C L KQ +L F  SSI +  P +LIHCDIWGP+
Sbjct: 259 HLSSSRLDFMAKHLLNFHFQSNNACDVCALAKQRQLPFSVSSISSVRPFELIHCDIWGPY 318

Query: 335 KIHTHFGARYFLTIIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNG 514
           KI +  GA+YFLTI+ D++R+T V+ M  KS+TQ +L +FFS+V+ QF   I  +R DNG
Sbjct: 319 KIASLSGAKYFLTIVDDYSRFTXVFFMHHKSETQHLLVNFFSFVQTQFHVSIANIRVDNG 378

Query: 515 GEFTSMRPFLDEHGTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESI 694
           GEF S R F  + GT +QH+CV+TPQQNGVVE KHRH+L  ARA  FQA+L L FW E +
Sbjct: 379 GEFFSXREFFKQKGTTYQHSCVYTPQQNGVVERKHRHILESARAFXFQAHLPLPFWAECV 438

Query: 695 QTACYL 712
            TA ++
Sbjct: 439 STAVHI 444


>emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]
          Length = 1472

 Score =  235 bits (599), Expect = 1e-59
 Identities = 118/243 (48%), Positives = 157/243 (64%), Gaps = 12/243 (4%)
 Frame = +2

Query: 20   RDVDTRRTIGLGKHFNGLYYL------------TPSQNPHLVNHITHSSGLWHRRLGHPS 163
            +++ TRRTIGLGK  +GLYYL            + S N    N    S+ LWH RLGH S
Sbjct: 456  QNLATRRTIGLGKQRDGLYYLVALATEKSLTNHSSSTNQPACNLAISSTDLWHSRLGHVS 515

Query: 164  AAPLHSLSQSFPEIVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIH 343
             + L  ++++F      S + C ICPL KQ+RL F  S+I +  P ++IHC IWG ++  
Sbjct: 516  PSRLSFIAKNFLNFSVQSNNACPICPLAKQSRLPFGTSAISSTKPFEIIHCHIWGRYQHP 575

Query: 344  THFGARYFLTIIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEF 523
            + FGA YFLTI+ D+TR+TW++LM  K + QS+LK FFS+V  QF+  IK  R DNG EF
Sbjct: 576  SLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQSLLKRFFSYVFTQFEFCIKTFRNDNGREF 635

Query: 524  TSMRPFLDEHGTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTA 703
            TS+  F  ++G IFQH+ V+TPQQNGVVE KHRH+L V RAL+F A +  QFWGE   TA
Sbjct: 636  TSLHSFFQDNGVIFQHSYVYTPQQNGVVERKHRHILQVTRALKFHAQVPTQFWGECALTA 695

Query: 704  CYL 712
             ++
Sbjct: 696  VHI 698


>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
          Length = 1236

 Score =  235 bits (599), Expect = 1e-59
 Identities = 117/246 (47%), Positives = 158/246 (64%), Gaps = 15/246 (6%)
 Frame = +2

Query: 20   RDVDTRRTIGLGKHFNGLYYLTP-------SQNPHLV--------NHITHSSGLWHRRLG 154
            +D+ TR TIGLG+  +GLYYL         +Q P           + +T S+ LWHR LG
Sbjct: 446  QDLTTRTTIGLGEQRDGLYYLVALASKKPKTQTPSAAATSCRSPSSQVTSSTALWHRCLG 505

Query: 155  HPSAAPLHSLSQSFPEIVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPH 334
            H S++ L  +++      F S + C++C L KQ RL F  SSI +  P +LIHCDIWGP+
Sbjct: 506  HLSSSRLDFMAKHLLNFPFQSNNACDVCALAKQRRLPFSVSSISSVRPFELIHCDIWGPY 565

Query: 335  KIHTHFGARYFLTIIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNG 514
            KI +   A+YFLTI+ D++R+TWV+ M  KS+TQ +L +FFS+V+ QF   I  +R DNG
Sbjct: 566  KIASLSSAKYFLTIVDDYSRFTWVFFMHHKSETQHLLVNFFSFVQTQFHVSIANIRVDNG 625

Query: 515  GEFTSMRPFLDEHGTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESI 694
            GEF SMR F  + GT +QH+CV+TPQQNGVVE KH H+L  ARA  FQA+L L FW E +
Sbjct: 626  GEFFSMREFFKQKGTTYQHSCVYTPQQNGVVERKHCHILESARAFHFQAHLPLPFWAECV 685

Query: 695  QTACYL 712
             T  ++
Sbjct: 686  STVVHI 691


>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
          Length = 1059

 Score =  234 bits (597), Expect = 2e-59
 Identities = 117/246 (47%), Positives = 157/246 (63%), Gaps = 15/246 (6%)
 Frame = +2

Query: 20   RDVDTRRTIGLGKHFNGLYYLTP-------SQNPHLV--------NHITHSSGLWHRRLG 154
            +D+ TR TIGLG+  +GLYYL         +Q P           + +T S+ LWH RLG
Sbjct: 463  QDLTTRTTIGLGEQRDGLYYLVALASEKPKTQTPSXXATSCRSPSSQVTSSTALWHXRLG 522

Query: 155  HPSAAPLHSLSQSFPEIVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPH 334
            H S++ L  +++      F S + C++C L KQ RL F  SSI +  P +LIHCD WGP+
Sbjct: 523  HLSSSRLDFMAKHLLNFPFQSNNACDVCXLAKQRRLPFSVSSISSVRPFELIHCDXWGPY 582

Query: 335  KIHTHFGARYFLTIIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNG 514
            KI +  GA+ FLTI+ D++R+TWV+ M  KS+TQ +L  FFS+V+ QF   I  +R DNG
Sbjct: 583  KIASLSGAKXFLTIVDDYSRFTWVFFMHHKSETQHLLVKFFSFVQTQFHVSIANIRVDNG 642

Query: 515  GEFTSMRPFLDEHGTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESI 694
            GEF SMR F  + GT +QH+CV+T QQNGVVE KHRH+L   RA RFQA+L L FW E +
Sbjct: 643  GEFFSMREFFKQKGTTYQHSCVYTSQQNGVVERKHRHILESTRAFRFQAHLPLPFWAECV 702

Query: 695  QTACYL 712
             TA ++
Sbjct: 703  STAVHI 708


>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score =  230 bits (586), Expect = 4e-58
 Identities = 118/243 (48%), Positives = 152/243 (62%), Gaps = 12/243 (4%)
 Frame = +2

Query: 20   RDVDTRRTIGLGKHFNGLYYL------------TPSQNPHLVNHITHSSGLWHRRLGHPS 163
            +D+ TRRTIGLGK  + LYYL            + S N    N    S+ LWH RLGH  
Sbjct: 487  QDLATRRTIGLGKQRDRLYYLVALATEKSLTNHSSSTNQPACNLAISSTDLWHSRLGH-- 544

Query: 164  AAPLHSLSQSFPEIVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIH 343
                             S + C ICPL KQ+RL F  S+I +  P ++IHCDIWG ++  
Sbjct: 545  -----------------SNNACPICPLAKQSRLPFGTSAISSTKPFEIIHCDIWGRYRHP 587

Query: 344  THFGARYFLTIIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEF 523
            + FGA YFLTI+ D+TR+TW++LM  K + QS+LK FFS+V  QF+  IK  R+DN  EF
Sbjct: 588  SLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQSLLKRFFSYVFTQFEFRIKTFRSDNXXEF 647

Query: 524  TSMRPFLDEHGTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTA 703
            TS+R F  ++G IFQH+CV+TPQQNGVVE KHRH+L VARAL+F A +  QFWGE   TA
Sbjct: 648  TSLRSFFQDNGVIFQHSCVYTPQQNGVVERKHRHILQVARALKFHAQVPTQFWGECALTA 707

Query: 704  CYL 712
             ++
Sbjct: 708  VHI 710


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  213 bits (543), Expect = 4e-53
 Identities = 108/233 (46%), Positives = 150/233 (64%), Gaps = 2/233 (0%)
 Frame = +2

Query: 20   RDVDTRRTIGLGKHFNGLYYLTPSQNP--HLVNHITHSSGLWHRRLGHPSAAPLHSLSQS 193
            +D  +R  IG G+  +G+YYLT +     H V+ IT    LWH+RLGHPS + L SL   
Sbjct: 473  QDRFSRTLIGTGEERDGVYYLTDAATTTVHKVD-ITTDHALWHQRLGHPSFSVLSSLPLF 531

Query: 194  FPEIVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIHTHFGARYFLT 373
                   S   C++C   KQTR  F  SS K+     LIHCD+WGP+++ +  GA YFLT
Sbjct: 532  SGSSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLT 591

Query: 374  IIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEFTSMRPFLDEH 553
            I+ DF+R  W YL+  KS+ +S+L +F ++ + QF + +KI+R+DNG EF  +  +  E 
Sbjct: 592  IVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFMCLSSYFKEQ 651

Query: 554  GTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTACYL 712
            G + Q +CV TPQQNG VE KHRH+LNV+RAL FQA+L ++FWGE++ TA YL
Sbjct: 652  GIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYL 704


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  213 bits (542), Expect = 5e-53
 Identities = 107/233 (45%), Positives = 150/233 (64%), Gaps = 2/233 (0%)
 Frame = +2

Query: 20   RDVDTRRTIGLGKHFNGLYYLTPSQNP--HLVNHITHSSGLWHRRLGHPSAAPLHSLSQS 193
            +D  +R  IG G+  +G+YYLT +     H V+ +T    LWH+RLGHPS + L SL   
Sbjct: 473  QDRFSRTLIGTGEERDGVYYLTDAATTTVHKVD-VTTDHALWHQRLGHPSFSVLSSLPLF 531

Query: 194  FPEIVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIHTHFGARYFLT 373
                   S   C++C   KQTR  F  SS K+     LIHCD+WGP+++ +  GA YFLT
Sbjct: 532  SGSSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLT 591

Query: 374  IIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEFTSMRPFLDEH 553
            I+ DF+R  W YL+  KS+ +S+L +F ++ + QF + +KI+R+DNG EF  +  +  E 
Sbjct: 592  IVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFMCLSSYFKEQ 651

Query: 554  GTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTACYL 712
            G + Q +CV TPQQNG VE KHRH+LNV+RAL FQA+L ++FWGE++ TA YL
Sbjct: 652  GIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYL 704


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score =  211 bits (536), Expect = 2e-52
 Identities = 104/235 (44%), Positives = 147/235 (62%), Gaps = 1/235 (0%)
 Frame = +2

Query: 11  AAPRDVDTRRTIGLGKHFNGLYYLTPSQNPHL-VNHITHSSGLWHRRLGHPSAAPLHSLS 187
           A   D  +R  IG G+  +G+YYLT      +    ++    LWH+RLGHPS + L SL 
Sbjct: 48  ACKLDRFSRTLIGSGEERDGVYYLTDVATAKIHTAKVSSDQALWHQRLGHPSFSVLSSLP 107

Query: 188 QSFPEIVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIHTHFGARYF 367
                 +      C++C   KQTR  F  S+ K+     LIHCD+WGP+++ +  GA YF
Sbjct: 108 VLTSSSLSVGSRSCDVCFRAKQTREVFPVSTNKSIECFSLIHCDVWGPYRVPSSCGAVYF 167

Query: 368 LTIIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEFTSMRPFLD 547
           LTI+ DF+R  W YL+  KS+ +++L +F  + + QF + +K+LR+DNG EF  +  +  
Sbjct: 168 LTIVDDFSRAVWTYLLLAKSEVRTVLTNFLVYTEKQFGKSVKVLRSDNGTEFMCLASYFR 227

Query: 548 EHGTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTACYL 712
           EHG + Q +CV TPQQNG VE KHRH+LNVARA+ FQA+L +QFWGE++ TA YL
Sbjct: 228 EHGIVHQTSCVGTPQQNGRVERKHRHILNVARAILFQASLPIQFWGEAVLTAAYL 282


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  207 bits (527), Expect = 3e-51
 Identities = 106/233 (45%), Positives = 144/233 (61%), Gaps = 2/233 (0%)
 Frame = +2

Query: 20   RDVDTRRTIGLGKHFNGLYYLTP--SQNPHLVNHITHSSGLWHRRLGHPSAAPLHSLSQS 193
            +D  ++  IG G+   G+YYLT       H  N +     LWH+RLGHPS + L SL   
Sbjct: 490  QDRSSKTLIGSGEERGGVYYLTDVTPAKIHTAN-VDSDQALWHQRLGHPSFSVLSSLPLF 548

Query: 194  FPEIVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIHTHFGARYFLT 373
                   + H C++C   KQTR  F  S  KT     LIHCD+WGP+++    GA YFLT
Sbjct: 549  SKTSSTVTSHSCDVCFRAKQTREVFPESINKTEECFSLIHCDVWGPYRVPASCGAVYFLT 608

Query: 374  IIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEFTSMRPFLDEH 553
            I+ D++R  W YL+  KS+ + +L +F  + + QF + +K++R+DNG EF  +  +  E+
Sbjct: 609  IVDDYSRAVWTYLLLEKSEVRQVLTNFLKYAEKQFGKTVKMVRSDNGTEFMCLSSYFREN 668

Query: 554  GTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTACYL 712
            G I Q +CV TPQQNG VE KHRH+LNVARAL FQA+L ++FWGESI TA YL
Sbjct: 669  GIIHQTSCVGTPQQNGRVERKHRHILNVARALLFQASLPIKFWGESILTAAYL 721


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score =  206 bits (524), Expect = 6e-51
 Identities = 109/232 (46%), Positives = 145/232 (62%), Gaps = 1/232 (0%)
 Frame = +2

Query: 20   RDVDTRRTIGLGKHFNGLYYLTPSQNPHLVNHITHSSGLWHRRLGHPSAAPLHSLSQSFP 199
            +D  T   IG GK  NGLY+   ++    +  +  SS LWH RLGHPS+  L  LS S  
Sbjct: 432  QDRITLTLIGAGKQQNGLYFFRGTETVASMTRMDSSSQLWHCRLGHPSSKVLKLLSFSDS 491

Query: 200  E-IVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIHTHFGARYFLTI 376
                F+SK  CEIC   KQTR  F  S+ KT++P +++HCD+WGP++  +  G+ YFLT+
Sbjct: 492  TGHAFDSK-TCEICIKAKQTRDPFPLSNNKTSSPFEMVHCDLWGPYRTTSICGSNYFLTL 550

Query: 377  IYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEFTSMRPFLDEHG 556
            + ++TR  W+YL+  K      LK+F S V+ QF   IK +R+DNG EF  +  F  +HG
Sbjct: 551  VDNYTRAVWLYLLPSKQTAPMHLKNFISLVERQFSTKIKTIRSDNGTEFVCLSSFFVDHG 610

Query: 557  TIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTACYL 712
             I + +CV TPQQNG VE KHRH+LNVARALRFQA L ++FW     TA YL
Sbjct: 611  IIHETSCVGTPQQNGRVERKHRHILNVARALRFQARLPIEFWSYCALTAAYL 662


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  204 bits (518), Expect = 3e-50
 Identities = 109/236 (46%), Positives = 148/236 (62%), Gaps = 5/236 (2%)
 Frame = +2

Query: 20  RDVDTRRTIGLGKHFNGLYYLTPSQNPHLVN-HITHSSGLWHRRLGHPSAAPLHSLSQSF 196
           +D  TR   G+GK  NG +     +N   V+  +     LWHRRLGH S   ++ L +  
Sbjct: 252 QDRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPR-- 309

Query: 197 PEIVFNSK----HVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIHTHFGARY 364
            E++ + K    +VC+ C   KQTR +F  S  ++     LIHCD+WGP++  ++ GARY
Sbjct: 310 -ELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRTPSYSGARY 368

Query: 365 FLTIIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEFTSMRPFL 544
           FLTI+ D++R  WVYLMT KS+TQ  LK F + V+ QFD +IK +R+DNG EF  MR + 
Sbjct: 369 FLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDTEIKTVRSDNGTEFLCMREYF 428

Query: 545 DEHGTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTACYL 712
              G   + +CV TP QNG VE KHRH+LN+ARALRFQ+ L +QFWGE I +A YL
Sbjct: 429 LHKGITHETSCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYL 484


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score =  203 bits (517), Expect = 4e-50
 Identities = 107/233 (45%), Positives = 146/233 (62%), Gaps = 2/233 (0%)
 Frame = +2

Query: 20   RDVDTRRTIGLGKHFNGLYYLTPSQNPHLV-NHITHSSGLWHRRLGHPSAAPLHSLSQS- 193
            +D  T   IG G+  NGLY+    +    V +    SS LWH+RLGHPS+  LH L  S 
Sbjct: 467  QDRTTLMLIGAGRELNGLYFFRGVETAAAVTSKALPSSQLWHQRLGHPSSKALHLLPFSD 526

Query: 194  FPEIVFNSKHVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIHTHFGARYFLT 373
                 F+SK  CEIC   KQTR  F  SS KT+   +L+HCD+WGP++  +  G+RYFLT
Sbjct: 527  VTSSTFDSK-TCEICIQAKQTRDPFPLSSNKTSFAFELVHCDLWGPYRTTSICGSRYFLT 585

Query: 374  IIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEFTSMRPFLDEH 553
            ++ D++R  W+YL+  K +    LK+F + V+ Q+  +IK++R+DNG EF  +  F  + 
Sbjct: 586  LVDDYSRAVWLYLLPSKQEAPKHLKNFIALVERQYTTNIKMIRSDNGSEFICLSDFFAQK 645

Query: 554  GTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTACYL 712
            G I + +CV TPQQNG VE KHRH+LNVARALRFQ+ L ++FW     TA YL
Sbjct: 646  GIIHETSCVGTPQQNGRVERKHRHILNVARALRFQSGLPIEFWSYCALTAAYL 698


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  202 bits (514), Expect = 9e-50
 Identities = 109/235 (46%), Positives = 147/235 (62%), Gaps = 5/235 (2%)
 Frame = +2

Query: 23   DVDTRRTIGLGKHFNGLYYLTPSQNPHLVN-HITHSSGLWHRRLGHPSAAPLHSLSQSFP 199
            D  TR    +GK  NG +     +N   V+  +     LWHRRLGH S   ++ L +   
Sbjct: 477  DRTTRMVTRIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPR--- 533

Query: 200  EIVFNSK----HVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIHTHFGARYF 367
            E++ + K    +VC+ C   KQTR +F  S  ++     LIHCD+WGP++  ++ GARYF
Sbjct: 534  ELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRAPSYSGARYF 593

Query: 368  LTIIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEFTSMRPFLD 547
            LTI+ D++R  WVYLMT KS+TQ  LK F + V+ QFD +IKI+R+DNG EF  MR +  
Sbjct: 594  LTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDTEIKIVRSDNGTEFLCMREYFL 653

Query: 548  EHGTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTACYL 712
              G   + +CV TP QNG VE KHRH+LN+ARALRFQ+ L +QFWGE I +A YL
Sbjct: 654  HKGIAHETSCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYL 708


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  202 bits (513), Expect = 1e-49
 Identities = 108/236 (45%), Positives = 147/236 (62%), Gaps = 5/236 (2%)
 Frame = +2

Query: 20  RDVDTRRTIGLGKHFNGLYYLTPSQNPHLVN-HITHSSGLWHRRLGHPSAAPLHSLSQSF 196
           +D  TR   G+GK  NG +     +N   V+  +     LWHRRLGH S   ++ L +  
Sbjct: 252 QDRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPR-- 309

Query: 197 PEIVFNSK----HVCEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIHTHFGARY 364
            E++ + K    +VC+ C   KQTR +F     ++     LIHCD+WGP++  ++ GARY
Sbjct: 310 -ELLSSGKEILENVCDTCMRAKQTRDTFPLRDNRSMDSFQLIHCDVWGPYRTPSYSGARY 368

Query: 365 FLTIIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEFTSMRPFL 544
           FLTI+ D++R  WVYLMT KS+TQ  LK F + V+ QFD +IK +R+DNG EF  MR + 
Sbjct: 369 FLTIVDDYSRGVWVYLMTDKSETQKHLKDFMALVERQFDTEIKTVRSDNGTEFLCMREYF 428

Query: 545 DEHGTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTACYL 712
              G   + +CV TP QNG VE KHRH+LN+ARALRFQ+ L +QFWGE I +A YL
Sbjct: 429 LHKGIAHETSCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYL 484


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  199 bits (506), Expect = 7e-49
 Identities = 104/235 (44%), Positives = 146/235 (62%), Gaps = 4/235 (1%)
 Frame = +2

Query: 20   RDVDTRRTIGLGKHFNGLYYLTPSQNPHLVNHITHSS-GLWHRRLGHPSAAPLHSLSQSF 196
            +D  +R  +G G+   G ++   ++    V      +  LWH R+GHP+A  +  + +S 
Sbjct: 352  QDRTSRMVMGAGRRVGGTFHFRSTEIAASVTVKEEKNYELWHSRMGHPAARVVSLIPES- 410

Query: 197  PEIVFNSKHV---CEICPLTKQTRLSFIPSSIKTAAPIDLIHCDIWGPHKIHTHFGARYF 367
              +  +S H+   C++C   KQTR SF  S  KT    +LI+CD+WGP++  +H GARYF
Sbjct: 411  -SVSVSSTHLNKACDVCHRAKQTRNSFPLSINKTLRIFELIYCDLWGPYRTPSHTGARYF 469

Query: 368  LTIIYDFTRYTWVYLMTFKSDTQSILKSFFSWVKPQFDRDIKILRADNGGEFTSMRPFLD 547
            LTII D++R  W+YL+  KS+    LK+FF+    QF+  IK +R+DNG EF  +  F  
Sbjct: 470  LTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAMTDRQFNVKIKTVRSDNGTEFLCLTKFFQ 529

Query: 548  EHGTIFQHTCVHTPQQNGVVECKHRHLLNVARALRFQANLHLQFWGESIQTACYL 712
            E G I + +CV TP++N  VE KHRHLLNVARALRFQANL +QFWGE + TA YL
Sbjct: 530  EQGVIHERSCVATPERNDRVERKHRHLLNVARALRFQANLPIQFWGECVLTAAYL 584