BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00017739
         (1311 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE04807.2| OSJNBb0022P19.2 [Oryza sativa Japonica Group]         156   4e-94
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   160   3e-91
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   161   2e-82
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]         154   1e-80
gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   155   3e-80
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]         153   4e-80
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16...   170   4e-80
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc...   153   7e-80
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         152   7e-80
gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subc...   154   9e-80
gb|AAR87214.1| retrotransposon protein, putative, Ty1-copia sub-...   154   9e-80
gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]     153   2e-79
gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subc...   153   2e-79
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc...   153   2e-79
gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subc...   153   2e-79
gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group...   153   2e-79
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         153   2e-79
gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Jap...   153   2e-79
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]     153   2e-79
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]   169   2e-79

>emb|CAE04807.2| OSJNBb0022P19.2 [Oryza sativa Japonica Group]
          Length = 1099

 Score =  156 bits (394), Expect(4) = 4e-94
 Identities = 80/201 (39%), Positives = 124/201 (61%), Gaps = 5/201 (2%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G   VD +F+G ++ S   RFL++NS   ++   TI+ES+DATF EN F  K+  P  
Sbjct: 596  KLGPNTVDCVFIGYAIHSVGYRFLIVNSRVLDMHVGTILESRDATFFENEFPMKH-TPST 654

Query: 737  FSYDLSYLH-----LDHPSYSVSASVEPDLMFEPRRSKRARVERNLGKDFITFFIEDAPS 573
             S +    H     ++H   +   + E D + + R+SKR RV ++ G D+I + ++D P 
Sbjct: 655  SSQETVMPHENFAPIEHNDQTSEKNPEEDNIVDTRKSKRQRVAKSFGDDYIVYLMDDTPR 714

Query: 572  SYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKKKLRTDGTVE 393
            + ++A +S D  +WKEA+ S+++SII N TW + + P G  + GCK +FKKKLR DGT+E
Sbjct: 715  TIEEAYSSLDANYWKEAVRSEMDSIISNGTWEVVERPYGCKSVGCKWVFKKKLRPDGTIE 774

Query: 392  TYKARFVVQGFR*KAGIDYFE 330
             YKAR V +G+  K G D+F+
Sbjct: 775  KYKARLVTKGYTQKEGEDFFD 795



 Score =  132 bits (331), Expect(4) = 4e-94
 Identities = 62/96 (64%), Positives = 77/96 (80%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            LALA+ H LLVHQMD+KT FLN +LEEEIYM+QP+G+ + GQE  VCKL+KSLYGLKQAP
Sbjct: 810  LALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQEGMVCKLLKSLYGLKQAP 869

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +   GF +NE++KC+Y +  G + VI
Sbjct: 870  KQWHEKFDTTLTSAGFVVNEANKCVYNRYGGGEGVI 905



 Score =  106 bits (264), Expect(4) = 4e-94
 Identities = 54/122 (44%), Positives = 77/122 (63%)
 Frame = -3

Query: 1300 RNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKAE 1121
            RN   LEL+HSD C+ N   T+G  +YF+T IDD +RFCY YL+KTKDE L  FK++KA 
Sbjct: 479  RNLAPLELVHSDSCEMNGVLTKGRKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKA- 537

Query: 1120 VENQQEKENYVG*KENYI*TYYILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVL 941
                   E + G  E  +   ++LN++ M  ++ T +E W+ +  +L+ LR WGCLAKV 
Sbjct: 538  -------EEWWG--EAVLTACHVLNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVN 588

Query: 940  VP 935
            +P
Sbjct: 589  IP 590



 Score = 21.9 bits (45), Expect(4) = 4e-94
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 796 TYSPVARLTT 805


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  160 bits (406), Expect(3) = 3e-91
 Identities = 84/200 (42%), Positives = 125/200 (62%), Gaps = 4/200 (2%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            KIG K +D IF+G + +SN  RFLV  S+  +I  +TI+ES++A+F E+ F  K+     
Sbjct: 711  KIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFFEDVFPCKS----- 765

Query: 737  FSYDLSYLHLDHPSYSV----SASVEPDLMFEPRRSKRARVERNLGKDFITFFIEDAPSS 570
                      + PS S     S     ++  EPRRSKR R E++ G DF+TF +E  P +
Sbjct: 766  ---------KEEPSSSKRMLESQDQNEEVEVEPRRSKRVRTEKSFGPDFLTFMLEGEPQT 816

Query: 569  YQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKKKLRTDGTVET 390
            +++A+NS +   WKEAI S+I+SI+ N+TW L DLPPG      K IFK+K++ DG+++ 
Sbjct: 817  FKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKPLSSKWIFKRKMKVDGSIDK 876

Query: 389  YKARFVVQGFR*KAGIDYFE 330
            YKAR V++G+R   G+DYF+
Sbjct: 877  YKARLVIKGYRQTEGLDYFD 896



 Score =  124 bits (311), Expect(3) = 3e-91
 Identities = 62/105 (59%), Positives = 74/105 (70%), Gaps = 11/105 (10%)
 Frame = -3

Query: 307  YYDSY-----------FLALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQE 161
            Y+D+Y            LA+A++  L +HQMDMK          EIYMEQPEGFS PGQE
Sbjct: 894  YFDTYSPVTRINSIRMVLAIAALRNLEIHQMDMK----------EIYMEQPEGFSAPGQE 943

Query: 160  NKVCKLIKSLYGLKQAPKQWHEKFD*VIILYGFQINESDKCLYCK 26
             KVCKL+KSLYGLKQAPKQWHEKFD V++ +GF+INE DKC+Y K
Sbjct: 944  KKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKINECDKCVYVK 988



 Score =  100 bits (249), Expect(3) = 3e-91
 Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 61/191 (31%)
 Frame = -3

Query: 1309 SVDRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKT----------- 1163
            SV+RN+  L+LIHSD+CD     TRGG++YF+TF+DD +++CY YL+K+           
Sbjct: 520  SVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLY 579

Query: 1162 ----KDEVLSKFKVFKAEVENQQE----------------------KENYVG*KEN---- 1073
                ++++  K KV +++   + E                      + N V  ++N    
Sbjct: 580  KTEVENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIHETTAPYSPQSNGVAERKNRTLK 639

Query: 1072 --------------------YI*TYYILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCL 953
                                 +   Y+LN+V     +KT YELWKGR PS   LR+WGCL
Sbjct: 640  EMMNAMLISSSLPQNMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCL 699

Query: 952  AKVLVPEPNVV 920
            AKV VP P  V
Sbjct: 700  AKVAVPPPKKV 710


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  161 bits (407), Expect(3) = 2e-82
 Identities = 91/201 (45%), Positives = 127/201 (63%), Gaps = 5/201 (2%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G + +S   RFLV++S+ SEIA + I+ES+D TF E+ F  +      
Sbjct: 691  KLGPKTVDCVFLGYAHNSAAYRFLVVHSETSEIAVNVIMESRDVTFFESIFPMR------ 744

Query: 737  FSYDLSYLHLDHPS--YSVSASVE---PDLMFEPRRSKRARVERNLGKDFITFFIEDAPS 573
               D   +  D PS  YS+ +SV    PDL  E RRSKR R E++LG D+I + +++ P 
Sbjct: 745  ---DKEVVAPDGPSRTYSLPSSVNDQTPDL--ELRRSKRQRTEKSLGDDYIIYLVDEEPR 799

Query: 572  SYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKKKLRTDGTVE 393
            S  +A  SPD  +W+EA+ S+++SII N TW +TDLP G    GCK IF++K R DGT+E
Sbjct: 800  SLTEAYTSPDAEYWREAVLSEMDSIISNGTWEITDLPAGCKPVGCKWIFRRKRRPDGTIE 859

Query: 392  TYKARFVVQGFR*KAGIDYFE 330
             YKAR V +GF  K   DYF+
Sbjct: 860  KYKARLVAKGFTQKKEEDYFD 880



 Score =  140 bits (354), Expect(3) = 2e-82
 Identities = 69/113 (61%), Positives = 85/113 (75%), Gaps = 11/113 (9%)
 Frame = -3

Query: 307  YYDSY-----------FLALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQE 161
            Y+D+Y            LALA+ +KLLVHQMD+KT FLN +LEEEIYM+QPEGF V GQE
Sbjct: 878  YFDTYSPVARLPTIRVLLALAAAYKLLVHQMDVKTAFLNGELEEEIYMQQPEGFVVKGQE 937

Query: 160  NKVCKLIKSLYGLKQAPKQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            +KVC+LIKSLYGLKQAP+QWHEKF+  +   GF +NE+DKC+Y +  G K VI
Sbjct: 938  SKVCRLIKSLYGLKQAPRQWHEKFNNTLTTAGFCVNEADKCVYYRFSGGKGVI 990



 Score = 54.3 bits (129), Expect(3) = 2e-82
 Identities = 26/43 (60%), Positives = 31/43 (72%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVPEP 929
            Y+LNRV   +R+ T YE +KGR P L+ LR WGCLAKV VP P
Sbjct: 645  YVLNRVPPRNREATPYEGFKGRKPDLSHLRTWGCLAKVNVPLP 687



 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 39/68 (57%), Positives = 52/68 (76%)
 Frame = -3

Query: 1300 RNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKAE 1121
            R++  LELIHSD+C+ N    +GG RYF+T IDD +RFCY YL++TKDE L  FK++K E
Sbjct: 502  RSTTPLELIHSDICEMNGIIIKGGKRYFLTLIDDATRFCYIYLLRTKDEALEHFKIYKTE 561

Query: 1120 VENQQEKE 1097
            VENQ +K+
Sbjct: 562  VENQLDKK 569


>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  154 bits (388), Expect(4) = 1e-80
 Identities = 83/210 (39%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G +  S   RFL++ S+  ++   TIIES+DATF E+ F  K+     
Sbjct: 674  KLGPKTVDCVFLGYAHHSIAYRFLIVKSEVLDMHVGTIIESRDATFFESFFPMKD----- 728

Query: 737  FSYDLSYLHLDHPSYSVSASVEP--------------DLMFEPRRSKRARVERNLGKDFI 600
                 ++   + PS  + +S+ P              D+   PRRSKR R  ++ G DF 
Sbjct: 729  -----THSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 599  TFFIEDAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKK 420
             + ++D P S  +A  SPD  +WKEA+ S+++SII N TW +T+ P G    GCK +FKK
Sbjct: 784  VYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 843

Query: 419  KLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
            KLR DGT+E YKAR V +G+  K G D+F+
Sbjct: 844  KLRPDGTIEKYKARLVAKGYTQKEGEDFFD 873



 Score =  138 bits (347), Expect(4) = 1e-80
 Identities = 65/96 (67%), Positives = 79/96 (82%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            L+LA+ H LLVHQMD+KT FLN +L+EEIYM+QP+GF V GQE KVCKL+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +I  GF +NE+DKC+Y +  G + VI
Sbjct: 948  KQWHEKFDKTLISAGFAVNEADKCVYYRHGGGEGVI 983



 Score = 57.0 bits (136), Expect(4) = 1e-80
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            ++LNRV   ++ KT YE+W GR PSL+ LR+WGCLAKV VP
Sbjct: 628  HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRIWGCLAKVNVP 668



 Score = 21.9 bits (45), Expect(4) = 1e-80
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 874 TYSPVARLTT 883



 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 42/69 (60%), Positives = 55/69 (79%)
 Frame = -3

Query: 1303 DRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKA 1124
            +RN   LEL+HSD+C+ N   T+GG RYF+TFIDD +RFCY YL+KTKDE L  FK++KA
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1123 EVENQQEKE 1097
            EVENQ +++
Sbjct: 544  EVENQLDRK 552


>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  155 bits (392), Expect(3) = 3e-80
 Identities = 94/219 (42%), Positives = 126/219 (57%), Gaps = 24/219 (10%)
 Frame = -2

Query: 914  IGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRAF 735
            +G + +D IF+G +L S   RF VI  + S IA  T+IES+DA F EN F   + +PR  
Sbjct: 636  LGERGIDCIFIGYALHSKAYRFYVIEPNDS-IAVHTVIESRDAIFDENRF---STIPR-- 689

Query: 734  SYDLSYLHLDHPSYSVSASVEPDLMFEP-------RRSKRARVERNLGKDFITFFIE--- 585
              DL          S S + E D  F P       R+SKR R+E++ G DF  + +E   
Sbjct: 690  QKDLVP--------SSSGTKEGDDTFVPPNESPTLRKSKRGRIEKSFGPDFQLYLVEGTR 741

Query: 584  --------------DAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTT 447
                          D P ++ +A+ S D  FWKEA+N +++SI+GNNTW LTDLPPG   
Sbjct: 742  DETGFQYSYCYHIDDEPRTFSEAMMSNDVIFWKEAVNDEMDSIMGNNTWFLTDLPPGCKP 801

Query: 446  FGCK*IFKKKLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
              CK IFKKK++ DGT++ +KAR VVQGFR K GIDYF+
Sbjct: 802  LACKWIFKKKIKVDGTIDKFKARLVVQGFRQKEGIDYFD 840



 Score =  139 bits (351), Expect(3) = 3e-80
 Identities = 66/115 (57%), Positives = 85/115 (73%), Gaps = 13/115 (11%)
 Frame = -3

Query: 307  YYDSY-----------FLALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQE 161
            Y+D+Y            + LASIH L++HQMD+KT FLN  LEEE+YM+QPEGF +PG E
Sbjct: 838  YFDTYAPVVRISSIRLLIGLASIHNLVIHQMDVKTAFLNGVLEEEVYMKQPEGFVMPGNE 897

Query: 160  NKVCKLIKSLYGLKQAPKQWHEKFD*VIILYGFQINESDKCLYCKI--VGNKCVI 2
            +KVCKL+KSLYGLKQAPKQWH++FD  ++  GF++N+SDKCLY K    GN  +I
Sbjct: 898  HKVCKLVKSLYGLKQAPKQWHQRFDEAVLSNGFELNQSDKCLYSKFDDSGNGVII 952



 Score = 53.5 bits (127), Expect(3) = 3e-80
 Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
 Frame = -3

Query: 1285 LELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYT---YLMKTKDEVLSKFKVFKAEVE 1115
            +EL HSD+    R + RGG  Y  T+   +     T   Y  +       K +V K  V 
Sbjct: 509  VELQHSDLVKKLR-TDRGGEYYDPTYFQSVGIIHETTAPYTPQQNGVFERKNRVLKEMVN 567

Query: 1114 NQQEKENYVG*KENY-----I*TYYILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLA 950
            +     +Y G  + +     +   Y+LNRV     K T YELW  + P+L  LRVWGC A
Sbjct: 568  SML---SYSGLSDGFWGEAMLTACYLLNRVPNKRNKITPYELWYKKKPNLNYLRVWGCRA 624

Query: 949  KVLVPEPNV 923
             V +P+P +
Sbjct: 625  IVRLPQPKI 633



 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 43/67 (64%), Positives = 52/67 (77%)
 Frame = -3

Query: 1309 SVDRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVF 1130
            S++RNS VLELIHSD+CD +  S+ G  +YF+TFIDD SRFCY YL+  KDE L KFKV+
Sbjct: 446  SIERNSKVLELIHSDLCDIHATSSLGNKKYFITFIDDYSRFCYVYLLHAKDEALEKFKVY 505

Query: 1129 KAEVENQ 1109
            K EVE Q
Sbjct: 506  KTEVELQ 512


>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  153 bits (386), Expect(4) = 4e-80
 Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G +  S   RFL++ S+  ++   TI+ES+DATF E+ F  K+     
Sbjct: 674  KLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKD----- 728

Query: 737  FSYDLSYLHLDHPSYSVSASVEP--------------DLMFEPRRSKRARVERNLGKDFI 600
                 ++   + PS  + +S+ P              D+   PRRSKR R  ++ G DF 
Sbjct: 729  -----THSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 599  TFFIEDAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKK 420
             + ++D P S  +A  SPD  +WKEA+ S+++SII N TW +T+ P G    GCK +FKK
Sbjct: 784  VYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 843

Query: 419  KLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
            KLR DGT+E YKAR V +G+  K G D+F+
Sbjct: 844  KLRPDGTIEKYKARLVAKGYTQKEGEDFFD 873



 Score =  136 bits (342), Expect(4) = 4e-80
 Identities = 64/96 (66%), Positives = 78/96 (81%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            L+LA+ H LLVHQMD+KT FLN +L+EEIYM+QP+GF V GQE KVCKL+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +   GF +NE+DKC+Y +  G + VI
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVI 983



 Score = 57.8 bits (138), Expect(4) = 4e-80
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            Y+LNRV   ++ KT YE+W GR PSL+ LR WGCLAKV VP
Sbjct: 628  YVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVP 668



 Score = 21.9 bits (45), Expect(4) = 4e-80
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 874 TYSPVARLTT 883



 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 41/68 (60%), Positives = 53/68 (77%)
 Frame = -3

Query: 1303 DRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKA 1124
            +RN   LEL+HSD+C+ N   T+GG RYF+T IDD +RFCY YL+KTKDE L  FK++KA
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1123 EVENQQEK 1100
            EVENQ ++
Sbjct: 544  EVENQLDR 551


>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
            gag/pol protein [Zea mays]
          Length = 1279

 Score =  170 bits (431), Expect(4) = 4e-80
 Identities = 93/203 (45%), Positives = 122/203 (60%), Gaps = 7/203 (3%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD IF+G S  S   RFL+I SD  ++  DTI+ES+DATF EN F  KN  P  
Sbjct: 648  KLGPKTVDCIFLGYSFHSTGYRFLIIKSDVPDMYVDTIMESRDATFFENEFPMKN-TPSD 706

Query: 737  FSYDLSYLH-------LDHPSYSVSASVEPDLMFEPRRSKRARVERNLGKDFITFFIEDA 579
             S++    H       +DH   S     E D     R+SKR RV ++ G DFI + +ED 
Sbjct: 707  TSHETIISHEHELSIPIDHAEDSHVHIPEEDDTIVTRKSKRQRVAKSFGNDFIVYLVEDT 766

Query: 578  PSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKKKLRTDGT 399
            P++  +A +SPD   WKEA+ S++ESI+ N TW + D P G    GCK IFKKKLR DGT
Sbjct: 767  PTTISEAYSSPDADLWKEAVRSEMESIMSNGTWEVVDRPYGCQPIGCKWIFKKKLRPDGT 826

Query: 398  VETYKARFVVQGFR*KAGIDYFE 330
            +E YKAR V +G+  K G D+F+
Sbjct: 827  IERYKARLVAKGYTQKEGEDFFD 849



 Score =  132 bits (333), Expect(4) = 4e-80
 Identities = 60/96 (62%), Positives = 77/96 (80%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            +A+A+ + L++HQMD+KT FLN +L+EEIYM+QPEGF   GQENKVC+LIKSLYGLKQAP
Sbjct: 864  IAVAASYGLIIHQMDVKTAFLNGELDEEIYMDQPEGFIADGQENKVCRLIKSLYGLKQAP 923

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +   GF +NESD C+Y +  G + V+
Sbjct: 924  KQWHEKFDNTLTAAGFVVNESDTCVYYRYGGGESVM 959



 Score = 43.9 bits (102), Expect(4) = 4e-80
 Identities = 20/41 (48%), Positives = 29/41 (70%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            ++LNRV   +++ T +E W+ R  +L+ LR WGCLAKV VP
Sbjct: 602  HVLNRVPTKNKEITPFEEWEKRKLNLSYLRTWGCLAKVNVP 642



 Score = 21.9 bits (45), Expect(4) = 4e-80
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 850 TYSPVARLTT 859



 Score = 92.4 bits (228), Expect = 4e-16
 Identities = 41/68 (60%), Positives = 53/68 (77%)
 Frame = -3

Query: 1300 RNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKAE 1121
            R+   LEL+HSD+C+ N   T+GG RYF+TFIDD +RFCY YL+KTKDE  + FK +KAE
Sbjct: 459  RSLAPLELVHSDLCEMNGILTKGGKRYFLTFIDDSTRFCYVYLLKTKDEAFNYFKAYKAE 518

Query: 1120 VENQQEKE 1097
            VENQ E++
Sbjct: 519  VENQLERK 526


>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  153 bits (386), Expect(4) = 7e-80
 Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G +  S   RFL++ S+  ++   TI+ES+DATF E+ F  K+     
Sbjct: 674  KLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKD----- 728

Query: 737  FSYDLSYLHLDHPSYSVSASVEP--------------DLMFEPRRSKRARVERNLGKDFI 600
                 ++   + PS  + +S+ P              D+   PRRSKR R  ++ G DF 
Sbjct: 729  -----THSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 599  TFFIEDAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKK 420
             + ++D P S  +A  SPD  +WKEA+ S+++SII N TW +T+ P G    GCK +FKK
Sbjct: 784  VYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 843

Query: 419  KLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
            KLR DGT+E YKAR V +G+  K G D+F+
Sbjct: 844  KLRPDGTIEKYKARLVAKGYTQKEGEDFFD 873



 Score =  137 bits (344), Expect(4) = 7e-80
 Identities = 64/96 (66%), Positives = 78/96 (81%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            L+LA+ H LLVHQMD+KT FLN +L+EEIYM+QP+GF V GQE KVCKL+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +   GF +NE+DKC+Y +  G + VI
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRYGGGEGVI 983



 Score = 56.2 bits (134), Expect(4) = 7e-80
 Identities = 26/49 (53%), Positives = 35/49 (71%)
 Frame = -3

Query: 1081 KENYI*TYYILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            +E  + + ++LNRV   ++ KT YE+W GR PSL+ LR WGCLAKV VP
Sbjct: 620  REALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVP 668



 Score = 21.9 bits (45), Expect(4) = 7e-80
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 874 TYSPVARLTT 883



 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 54/69 (78%)
 Frame = -3

Query: 1303 DRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKA 1124
            +RN   LEL+HSD+C+ N   T+GG RYF+T IDD +RFCY YL+KTKDE L  FK++KA
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1123 EVENQQEKE 1097
            EVENQ +++
Sbjct: 544  EVENQLDRK 552


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  152 bits (384), Expect(4) = 7e-80
 Identities = 83/210 (39%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G +  S   RFL++ S+  ++   TI+ES+DATF E+ F  K+     
Sbjct: 674  KLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKD----- 728

Query: 737  FSYDLSYLHLDHPSYSVSASVEP--------------DLMFEPRRSKRARVERNLGKDFI 600
                 ++   + PS  + +S+ P              D+   PRRSKR R  ++ G DF 
Sbjct: 729  -----THSGSNQPSEIIPSSITPSEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 599  TFFIEDAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKK 420
             + ++D P S  +A  SPD  +WKEAI S+++SII N TW +T+ P G    GCK +FKK
Sbjct: 784  VYLVDDTPKSISEAYASPDADYWKEAICSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 843

Query: 419  KLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
            KLR DGT+E YKAR V +G+  K G D+F+
Sbjct: 844  KLRPDGTIEKYKARLVAKGYTQKEGEDFFD 873



 Score =  138 bits (347), Expect(4) = 7e-80
 Identities = 65/96 (67%), Positives = 79/96 (82%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            L+LA+ H LLVHQMD+KT FLN +L+EEIYM+QP+GF V GQE KVCKL+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +I  GF +NE+DKC+Y +  G + VI
Sbjct: 948  KQWHEKFDKTLISAGFAVNEADKCVYYRHGGGEGVI 983



 Score = 55.8 bits (133), Expect(4) = 7e-80
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            ++LNRV   ++ KT YE+W GR PSL+ LR WGCLAKV VP
Sbjct: 628  HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVP 668



 Score = 21.9 bits (45), Expect(4) = 7e-80
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 874 TYSPVARLTT 883



 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 40/69 (57%), Positives = 54/69 (78%)
 Frame = -3

Query: 1303 DRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKA 1124
            +RN   LEL+HSD+C+ N   T+GG RYF+T IDD +RFCY YL+KTKDE L  FK++KA
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1123 EVENQQEKE 1097
            E+ENQ +++
Sbjct: 544  EIENQLDRK 552


>gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1397

 Score =  154 bits (388), Expect(4) = 9e-80
 Identities = 83/210 (39%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G +  S   RFL++ S+  ++   TI+ES+DATF E  F  K+     
Sbjct: 751  KLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFERFFPMKD----- 805

Query: 737  FSYDLSYLHLDHPSYSVSASVEP--------------DLMFEPRRSKRARVERNLGKDFI 600
                 ++   + PS  + +S+ P              D+   PRRSKR R  ++ G DF 
Sbjct: 806  -----THSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 860

Query: 599  TFFIEDAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKK 420
             + ++D P S  +A  SPD  +WKEA+ S+++SII N TW +T+ P G    GCK +FKK
Sbjct: 861  VYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 920

Query: 419  KLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
            KLR DGT+E YKARFV +G+  K G D+F+
Sbjct: 921  KLRPDGTIEKYKARFVGKGYTQKEGEDFFD 950



 Score =  136 bits (342), Expect(4) = 9e-80
 Identities = 64/96 (66%), Positives = 78/96 (81%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            L+LA+ H LLVHQMD+KT FLN +L+EEIYM+QP+GF V GQE KVCKL+KSLYGLKQAP
Sbjct: 965  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 1024

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +   GF +NE+DKC+Y +  G + VI
Sbjct: 1025 KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVI 1060



 Score = 55.8 bits (133), Expect(4) = 9e-80
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            ++LNRV   ++ KT YE+W GR PSL+ LR WGCLAKV VP
Sbjct: 705  HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVP 745



 Score = 21.9 bits (45), Expect(4) = 9e-80
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 951 TYSPVARLTT 960



 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 54/69 (78%)
 Frame = -3

Query: 1303 DRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKA 1124
            +RN   LEL+HSD+C+ N   T+GG RYF+T IDD +RFCY YL+KTKDE L  FK++KA
Sbjct: 561  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 620

Query: 1123 EVENQQEKE 1097
            EVENQ +++
Sbjct: 621  EVENQLDRK 629


>gb|AAR87214.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1393

 Score =  154 bits (388), Expect(4) = 9e-80
 Identities = 83/210 (39%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G +  S   RFL++ S+  ++   TI+ES+DATF E  F  K+     
Sbjct: 751  KLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFERFFPMKD----- 805

Query: 737  FSYDLSYLHLDHPSYSVSASVEP--------------DLMFEPRRSKRARVERNLGKDFI 600
                 ++   + PS  + +S+ P              D+   PRRSKR R  ++ G DF 
Sbjct: 806  -----THSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 860

Query: 599  TFFIEDAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKK 420
             + ++D P S  +A  SPD  +WKEA+ S+++SII N TW +T+ P G    GCK +FKK
Sbjct: 861  VYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 920

Query: 419  KLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
            KLR DGT+E YKARFV +G+  K G D+F+
Sbjct: 921  KLRPDGTIEKYKARFVGKGYTQKEGEDFFD 950



 Score =  136 bits (342), Expect(4) = 9e-80
 Identities = 64/96 (66%), Positives = 78/96 (81%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            L+LA+ H LLVHQMD+KT FLN +L+EEIYM+QP+GF V GQE KVCKL+KSLYGLKQAP
Sbjct: 965  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 1024

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +   GF +NE+DKC+Y +  G + VI
Sbjct: 1025 KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVI 1060



 Score = 55.8 bits (133), Expect(4) = 9e-80
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            ++LNRV   ++ KT YE+W GR PSL+ LR WGCLAKV VP
Sbjct: 705  HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVP 745



 Score = 21.9 bits (45), Expect(4) = 9e-80
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 951 TYSPVARLTT 960



 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 54/69 (78%)
 Frame = -3

Query: 1303 DRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKA 1124
            +RN   LEL+HSD+C+ N   T+GG RYF+T IDD +RFCY YL+KTKDE L  FK++KA
Sbjct: 561  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 620

Query: 1123 EVENQQEKE 1097
            EVENQ +++
Sbjct: 621  EVENQLDRK 629


>gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1861

 Score =  153 bits (386), Expect(4) = 2e-79
 Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G +  S   RFL++ S+  ++   TI+ES+DATF E+ F  K+     
Sbjct: 1088 KLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKD----- 1142

Query: 737  FSYDLSYLHLDHPSYSVSASVEP--------------DLMFEPRRSKRARVERNLGKDFI 600
                 ++   + PS  + +S+ P              D+   PRRSKR R  ++ G DF 
Sbjct: 1143 -----THSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 1197

Query: 599  TFFIEDAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKK 420
             + ++D P S  +A  SPD  +WKEA+ S+++SII N TW +T+ P G    GCK +FKK
Sbjct: 1198 VYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 1257

Query: 419  KLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
            KLR DGT+E YKAR V +G+  K G D+F+
Sbjct: 1258 KLRPDGTIEKYKARLVAKGYTQKEGEDFFD 1287



 Score =  136 bits (342), Expect(4) = 2e-79
 Identities = 64/96 (66%), Positives = 78/96 (81%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            L+LA+ H LLVHQMD+KT FLN +L+EEIYM+QP+GF V GQE KVCKL+KSLYGLKQAP
Sbjct: 1302 LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 1361

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +   GF +NE+DKC+Y +  G + VI
Sbjct: 1362 KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVI 1397



 Score = 55.8 bits (133), Expect(4) = 2e-79
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            ++LNRV   ++ KT YE+W GR PSL+ LR WGCLAKV VP
Sbjct: 1042 HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVP 1082



 Score = 21.9 bits (45), Expect(4) = 2e-79
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330  TYAPVARITT 301
            TY+PVAR+TT
Sbjct: 1288 TYSPVARLTT 1297



 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 54/69 (78%)
 Frame = -3

Query: 1303 DRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKA 1124
            +RN   LEL+HSD+C+ N   T+GG RYF+T IDD +RFCY YL+KTKDE L  FK++KA
Sbjct: 898  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 957

Query: 1123 EVENQQEKE 1097
            EVENQ +++
Sbjct: 958  EVENQLDRK 966


>gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1805

 Score =  153 bits (386), Expect(4) = 2e-79
 Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G +  S   RFL++ S+  ++   TI+ES+DATF E+ F  K+     
Sbjct: 1159 KLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKD----- 1213

Query: 737  FSYDLSYLHLDHPSYSVSASVEP--------------DLMFEPRRSKRARVERNLGKDFI 600
                 ++   + PS  + +S+ P              D+   PRRSKR R  ++ G DF 
Sbjct: 1214 -----THSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 1268

Query: 599  TFFIEDAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKK 420
             + ++D P S  +A  SPD  +WKEA+ S+++SII N TW +T+ P G    GCK +FKK
Sbjct: 1269 VYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 1328

Query: 419  KLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
            KLR DGT+E YKAR V +G+  K G D+F+
Sbjct: 1329 KLRPDGTIEKYKARLVAKGYTQKEGEDFFD 1358



 Score =  136 bits (342), Expect(4) = 2e-79
 Identities = 64/96 (66%), Positives = 79/96 (82%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            L+LA+ H LLVHQMD+KTTFLN +L+EEIYM+QP+GF V GQE KVCKL+KSLYGLKQAP
Sbjct: 1373 LSLAASHGLLVHQMDVKTTFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 1432

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKF+  +   GF +NE+DKC+Y +  G + VI
Sbjct: 1433 KQWHEKFNKTLTSAGFAVNEADKCVYYRHGGGEGVI 1468



 Score = 55.8 bits (133), Expect(4) = 2e-79
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            ++LNRV   ++ KT YE+W GR PSL+ LR WGCLAKV VP
Sbjct: 1113 HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVP 1153



 Score = 21.9 bits (45), Expect(4) = 2e-79
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330  TYAPVARITT 301
            TY+PVAR+TT
Sbjct: 1359 TYSPVARLTT 1368



 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 54/69 (78%)
 Frame = -3

Query: 1303 DRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKA 1124
            +RN   LEL+HSD+C+ N   T+GG RYF+T IDD +RFCY YL+KTKDE L  FK++KA
Sbjct: 969  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 1028

Query: 1123 EVENQQEKE 1097
            EVENQ +++
Sbjct: 1029 EVENQLDRK 1037


>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  153 bits (386), Expect(4) = 2e-79
 Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G +  S   RFL++ S+  ++   TI+ES+DATF E+ F  K+     
Sbjct: 674  KLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKD----- 728

Query: 737  FSYDLSYLHLDHPSYSVSASVEP--------------DLMFEPRRSKRARVERNLGKDFI 600
                 ++   + PS  + +S+ P              D+   PRRSKR R  ++ G DF 
Sbjct: 729  -----THSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 599  TFFIEDAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKK 420
             + ++D P S  +A  SPD  +WKEA+ S+++SII N TW +T+ P G    GCK +FKK
Sbjct: 784  VYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 843

Query: 419  KLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
            KLR DGT+E YKAR V +G+  K G D+F+
Sbjct: 844  KLRPDGTIEKYKARLVAKGYTQKEGEDFFD 873



 Score =  136 bits (342), Expect(4) = 2e-79
 Identities = 64/96 (66%), Positives = 78/96 (81%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            L+LA+ H LLVHQMD+KT FLN +L+EEIYM+QP+GF V GQE KVCKL+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +   GF +NE+DKC+Y +  G + VI
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVI 983



 Score = 55.8 bits (133), Expect(4) = 2e-79
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            ++LNRV   ++ KT YE+W GR PSL+ LR WGCLAKV VP
Sbjct: 628  HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVP 668



 Score = 21.9 bits (45), Expect(4) = 2e-79
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 874 TYSPVARLTT 883



 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 54/69 (78%)
 Frame = -3

Query: 1303 DRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKA 1124
            +RN   LEL+HSD+C+ N   T+GG RYF+T IDD +RFCY YL+KTKDE L  FK++KA
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1123 EVENQQEKE 1097
            EVENQ +++
Sbjct: 544  EVENQLDRK 552


>gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  153 bits (386), Expect(4) = 2e-79
 Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G +  S   RFL++ S+  ++   TI+ES+DATF E+ F  K+     
Sbjct: 674  KLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKD----- 728

Query: 737  FSYDLSYLHLDHPSYSVSASVEP--------------DLMFEPRRSKRARVERNLGKDFI 600
                 ++   + PS  + +S+ P              D+   PRRSKR R  ++ G DF 
Sbjct: 729  -----THSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 599  TFFIEDAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKK 420
             + ++D P S  +A  SPD  +WKEA+ S+++SII N TW +T+ P G    GCK +FKK
Sbjct: 784  VYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 843

Query: 419  KLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
            KLR DGT+E YKAR V +G+  K G D+F+
Sbjct: 844  KLRPDGTIEKYKARLVAKGYTQKEGEDFFD 873



 Score =  136 bits (342), Expect(4) = 2e-79
 Identities = 64/96 (66%), Positives = 78/96 (81%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            L+LA+ H LLVHQMD+KT FLN +L+EEIYM+QP+GF V GQE KVCKL+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +   GF +NE+DKC+Y +  G + VI
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVI 983



 Score = 55.8 bits (133), Expect(4) = 2e-79
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            ++LNRV   ++ KT YE+W GR PSL+ LR WGCLAKV VP
Sbjct: 628  HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVP 668



 Score = 21.9 bits (45), Expect(4) = 2e-79
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 874 TYSPVARLTT 883



 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 54/69 (78%)
 Frame = -3

Query: 1303 DRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKA 1124
            +RN   LEL+HSD+C+ N   T+GG RYF+T IDD +RFCY YL+KTKDE L  FK++KA
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1123 EVENQQEKE 1097
            EVENQ +++
Sbjct: 544  EVENQLDRK 552


>gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1320

 Score =  153 bits (386), Expect(4) = 2e-79
 Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G +  S   RFL++ S+  ++   TI+ES+DATF E+ F  K+     
Sbjct: 674  KLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKD----- 728

Query: 737  FSYDLSYLHLDHPSYSVSASVEP--------------DLMFEPRRSKRARVERNLGKDFI 600
                 ++   + PS  + +S+ P              D+   PRRSKR R  ++ G DF 
Sbjct: 729  -----THSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 599  TFFIEDAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKK 420
             + ++D P S  +A  SPD  +WKEA+ S+++SII N TW +T+ P G    GCK +FKK
Sbjct: 784  VYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 843

Query: 419  KLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
            KLR DGT+E YKAR V +G+  K G D+F+
Sbjct: 844  KLRPDGTIEKYKARLVAKGYTQKEGEDFFD 873



 Score =  136 bits (342), Expect(4) = 2e-79
 Identities = 64/96 (66%), Positives = 78/96 (81%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            L+LA+ H LLVHQMD+KT FLN +L+EEIYM+QP+GF V GQE KVCKL+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +   GF +NE+DKC+Y +  G + VI
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVI 983



 Score = 55.8 bits (133), Expect(4) = 2e-79
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            ++LNRV   ++ KT YE+W GR PSL+ LR WGCLAKV VP
Sbjct: 628  HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVP 668



 Score = 21.9 bits (45), Expect(4) = 2e-79
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 874 TYSPVARLTT 883



 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 54/69 (78%)
 Frame = -3

Query: 1303 DRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKA 1124
            +RN   LEL+HSD+C+ N   T+GG RYF+T IDD +RFCY YL+KTKDE L  FK++KA
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1123 EVENQQEKE 1097
            EVENQ +++
Sbjct: 544  EVENQLDRK 552


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  153 bits (386), Expect(4) = 2e-79
 Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G +  S   RFL++ S+  ++   TI+ES+DATF E+ F  K+     
Sbjct: 674  KLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKD----- 728

Query: 737  FSYDLSYLHLDHPSYSVSASVEP--------------DLMFEPRRSKRARVERNLGKDFI 600
                 ++   + PS  + +S+ P              D+   PRRSKR R  ++ G DF 
Sbjct: 729  -----THSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 599  TFFIEDAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKK 420
             + ++D P S  +A  SPD  +WKEA+ S+++SII N TW +T+ P G    GCK +FKK
Sbjct: 784  VYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 843

Query: 419  KLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
            KLR DGT+E YKAR V +G+  K G D+F+
Sbjct: 844  KLRPDGTIEKYKARLVAKGYTQKEGEDFFD 873



 Score =  136 bits (342), Expect(4) = 2e-79
 Identities = 64/96 (66%), Positives = 78/96 (81%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            L+LA+ H LLVHQMD+KT FLN +L+EEIYM+QP+GF V GQE KVCKL+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +   GF +NE+DKC+Y +  G + VI
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVI 983



 Score = 55.8 bits (133), Expect(4) = 2e-79
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            ++LNRV   ++ KT YE+W GR PSL+ LR WGCLAKV VP
Sbjct: 628  HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVP 668



 Score = 21.9 bits (45), Expect(4) = 2e-79
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 874 TYSPVARLTT 883



 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 54/69 (78%)
 Frame = -3

Query: 1303 DRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKA 1124
            +RN   LEL+HSD+C+ N   T+GG RYF+T IDD +RFCY YL+KTKDE L  FK++KA
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1123 EVENQQEKE 1097
            EVENQ +++
Sbjct: 544  EVENQLDRK 552


>gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1308

 Score =  153 bits (386), Expect(4) = 2e-79
 Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G +  S   RFL++ S+  ++   TI+ES+DATF E+ F  K+     
Sbjct: 674  KLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKD----- 728

Query: 737  FSYDLSYLHLDHPSYSVSASVEP--------------DLMFEPRRSKRARVERNLGKDFI 600
                 ++   + PS  + +S+ P              D+   PRRSKR R  ++ G DF 
Sbjct: 729  -----THSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 599  TFFIEDAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKK 420
             + ++D P S  +A  SPD  +WKEA+ S+++SII N TW +T+ P G    GCK +FKK
Sbjct: 784  VYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 843

Query: 419  KLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
            KLR DGT+E YKAR V +G+  K G D+F+
Sbjct: 844  KLRPDGTIEKYKARLVAKGYTQKEGEDFFD 873



 Score =  136 bits (342), Expect(4) = 2e-79
 Identities = 64/96 (66%), Positives = 78/96 (81%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            L+LA+ H LLVHQMD+KT FLN +L+EEIYM+QP+GF V GQE KVCKL+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +   GF +NE+DKC+Y +  G + VI
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVI 983



 Score = 55.8 bits (133), Expect(4) = 2e-79
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            ++LNRV   ++ KT YE+W GR PSL+ LR WGCLAKV VP
Sbjct: 628  HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVP 668



 Score = 21.9 bits (45), Expect(4) = 2e-79
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 874 TYSPVARLTT 883



 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 54/69 (78%)
 Frame = -3

Query: 1303 DRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKA 1124
            +RN   LEL+HSD+C+ N   T+GG RYF+T IDD +RFCY YL+KTKDE L  FK++KA
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1123 EVENQQEKE 1097
            EVENQ +++
Sbjct: 544  EVENQLDRK 552


>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  153 bits (386), Expect(4) = 2e-79
 Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G +  S   RFL++ S+  ++   TI+ES+DATF E+ F  K+     
Sbjct: 674  KLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKD----- 728

Query: 737  FSYDLSYLHLDHPSYSVSASVEP--------------DLMFEPRRSKRARVERNLGKDFI 600
                 ++   + PS  + +S+ P              D+   PRRSKR R  ++ G DF 
Sbjct: 729  -----THSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 599  TFFIEDAPSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKK 420
             + ++D P S  +A  SPD  +WKEA+ S+++SII N TW +T+ P G    GCK +FKK
Sbjct: 784  VYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKK 843

Query: 419  KLRTDGTVETYKARFVVQGFR*KAGIDYFE 330
            KLR DGT+E YKAR V +G+  K G D+F+
Sbjct: 844  KLRPDGTIEKYKARLVAKGYTQKEGEDFFD 873



 Score =  136 bits (342), Expect(4) = 2e-79
 Identities = 64/96 (66%), Positives = 78/96 (81%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            L+LA+ H LLVHQMD+KT FLN +L+EEIYM+QP+GF V GQE KVCKL+KSLYGLKQAP
Sbjct: 888  LSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAP 947

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +   GF +NE+DKC+Y +  G + VI
Sbjct: 948  KQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVI 983



 Score = 55.8 bits (133), Expect(4) = 2e-79
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            ++LNRV   ++ KT YE+W GR PSL+ LR WGCLAKV VP
Sbjct: 628  HVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVP 668



 Score = 21.9 bits (45), Expect(4) = 2e-79
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 874 TYSPVARLTT 883



 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 42/69 (60%), Positives = 55/69 (79%)
 Frame = -3

Query: 1303 DRNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKA 1124
            +RN   LEL+HSD+C+ N   T+GG RYF+TFIDD +RFCY YL+KTKDE L  FK++KA
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1123 EVENQQEKE 1097
            EVENQ +++
Sbjct: 544  EVENQLDRK 552


>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
          Length = 1292

 Score =  169 bits (427), Expect(4) = 2e-79
 Identities = 92/203 (45%), Positives = 121/203 (59%), Gaps = 7/203 (3%)
 Frame = -2

Query: 917  KIGYKAVDTIFVG*SLDSNTNRFLVINSDFSEIANDTIIESQDATFSENAFHFKNCVPRA 738
            K+G K VD +F+G S  S   RFL+I SD  ++  DTI+ES+DATF EN F  KN  P  
Sbjct: 688  KLGPKTVDCVFLGYSFHSTGYRFLIIKSDVPDMYVDTIMESRDATFFENEFPMKN-TPSD 746

Query: 737  FSYDLSYLH-------LDHPSYSVSASVEPDLMFEPRRSKRARVERNLGKDFITFFIEDA 579
             S++    H       +DH   S     E D     R+SKR RV ++ G DFI + +ED 
Sbjct: 747  ISHETIIPHEHELSIPIDHAEDSHVHIPEEDDTIVTRKSKRQRVAKSFGNDFIVYLVEDT 806

Query: 578  PSSYQDAINSPDTPFWKEAINSKIESIIGNNTWILTDLPPGNTTFGCK*IFKKKLRTDGT 399
            P++  +A  SPD   WKEA+ S++ESI+ N TW + D P G    GCK IFKKKLR DGT
Sbjct: 807  PTTISEAYFSPDADLWKEAVRSEMESIMSNGTWEVVDRPYGCQPIGCKWIFKKKLRPDGT 866

Query: 398  VETYKARFVVQGFR*KAGIDYFE 330
            +E YKAR V +G+  K G D+F+
Sbjct: 867  IERYKARLVAKGYTQKEGEDFFD 889



 Score =  132 bits (333), Expect(4) = 2e-79
 Identities = 60/96 (62%), Positives = 77/96 (80%)
 Frame = -3

Query: 289  LALASIHKLLVHQMDMKTTFLNRDLEEEIYMEQPEGFSVPGQENKVCKLIKSLYGLKQAP 110
            +A+A+ + L++HQMD+KT FLN +L+EEIYM+QPEGF   GQENKVC+LIKSLYGLKQAP
Sbjct: 904  IAVAASYGLIIHQMDVKTAFLNGELDEEIYMDQPEGFIADGQENKVCRLIKSLYGLKQAP 963

Query: 109  KQWHEKFD*VIILYGFQINESDKCLYCKIVGNKCVI 2
            KQWHEKFD  +   GF +NESD C+Y +  G + V+
Sbjct: 964  KQWHEKFDNTLTAAGFVVNESDTCVYYRYGGGESVM 999



 Score = 43.5 bits (101), Expect(4) = 2e-79
 Identities = 20/41 (48%), Positives = 29/41 (70%)
 Frame = -3

Query: 1057 YILNRVSMWDRKKTTYELWKGRPPSLA*LRVWGCLAKVLVP 935
            ++LNRV   +++ T +E W+ R  +L+ LR WGCLAKV VP
Sbjct: 642  HVLNRVPTKNKEITPFEEWEKRRLNLSYLRTWGCLAKVNVP 682



 Score = 21.9 bits (45), Expect(4) = 2e-79
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 330 TYAPVARITT 301
           TY+PVAR+TT
Sbjct: 890 TYSPVARLTT 899



 Score = 92.4 bits (228), Expect = 4e-16
 Identities = 41/68 (60%), Positives = 53/68 (77%)
 Frame = -3

Query: 1300 RNSVVLELIHSDVCDSNRGSTRGGSRYFVTFIDDLSRFCYTYLMKTKDEVLSKFKVFKAE 1121
            R+   LEL+HSD+C+ N   T+GG RYF+TFIDD +RFCY YL+KTKDE  + FK +KAE
Sbjct: 499  RSLAPLELVHSDLCEMNGILTKGGKRYFLTFIDDSTRFCYVYLLKTKDEAFNYFKAYKAE 558

Query: 1120 VENQQEKE 1097
            VENQ E++
Sbjct: 559  VENQLERK 566