BLASTX nr result
ID: Stemona21_contig00017372
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00017372
(616 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containi... 149 8e-34
ref|XP_002525572.1| pentatricopeptide repeat-containing protein,... 139 5e-31
gb|EMJ20675.1| hypothetical protein PRUPE_ppa021440mg, partial [... 132 1e-28
ref|XP_004308191.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 130 2e-28
gb|EXB44293.1| hypothetical protein L484_012212 [Morus notabilis] 130 4e-28
gb|EOY19444.1| Pentatricopeptide repeat-containing protein, puta... 120 3e-25
gb|EOY19442.1| Pentatricopeptide repeat-containing protein, puta... 120 3e-25
ref|XP_002886049.1| pentatricopeptide repeat-containing protein ... 119 5e-25
ref|NP_179518.1| pentatricopeptide repeat-containing protein [Ar... 118 1e-24
gb|AAS99720.1| At2g19280 [Arabidopsis thaliana] gi|62319953|dbj|... 117 3e-24
ref|XP_006300135.1| hypothetical protein CARUB_v10016364mg [Caps... 115 1e-23
tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea m... 91 2e-16
ref|XP_006657951.1| PREDICTED: pentatricopeptide repeat-containi... 89 7e-16
gb|EOY05933.1| Pentatricopeptide repeat superfamily protein, put... 89 1e-15
ref|XP_004979582.1| PREDICTED: protein Rf1, mitochondrial-like i... 88 2e-15
tpg|DAA42219.1| TPA: PPR-814b [Zea mays] 88 2e-15
gb|ACN62069.1| PPR-814c [Zea mays] 88 2e-15
ref|XP_004979523.1| PREDICTED: protein Rf1, mitochondrial-like [... 88 2e-15
ref|XP_004958297.1| PREDICTED: pentatricopeptide repeat-containi... 88 2e-15
ref|XP_006409070.1| hypothetical protein EUTSA_v10023028mg, part... 87 3e-15
>ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 149 bits (375), Expect = 8e-34
Identities = 85/200 (42%), Positives = 117/200 (58%)
Frame = +3
Query: 3 LLDLVSGPATGAGDERHHSVFDAMRETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRR 182
LL L+S +G+E H++F + ET V V MLV CYV M VA+ + +
Sbjct: 120 LLHLIS---YNSGEEGWHNIFLKIHETHTKRRVLETVYGMLVNCYVKENMTQVALKLICK 176
Query: 183 MGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGE 362
M L FP GV L++ L++S QL AW+ M S+ L N ++SLFI +C+ G
Sbjct: 177 MRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGN 236
Query: 363 FGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSS 542
KLL++MK G + DVVA+TIVI +LCK LK ATS L+KM Q+GV D VS+SS
Sbjct: 237 IDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSS 296
Query: 543 IVDGYCSDGRLVEALGFFKI 602
+VDGYC G+ EA+ ++
Sbjct: 297 VVDGYCKVGKSEEAMDVLEV 316
Score = 62.8 bits (151), Expect = 7e-08
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 1/180 (0%)
Frame = +3
Query: 60 VFDAMRETSRSGSVFGVVCSMLVKCYV-DVGMADVAVASLRRMGSLGFFPSAGVYVWLIQ 236
VF M E F M C V D+ A + L +M G PS Y LI
Sbjct: 345 VFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNA---LKYLGKMLKRGIRPSVATYTLLID 401
Query: 237 LLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEV 416
K +E A +F M + L + V + + + G A +LL M+S G
Sbjct: 402 SCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSP 461
Query: 417 DVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFF 596
D+V + I+I L KRG + A L ++ + G +PD V+ ++I+ G+ + G EA F
Sbjct: 462 DLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLF 521
>ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535151|gb|EEF36831.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 687
Score = 139 bits (351), Expect = 5e-31
Identities = 74/184 (40%), Positives = 109/184 (59%), Gaps = 3/184 (1%)
Frame = +3
Query: 60 VFDAMRETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQL 239
+F + +T V SMLV CYV +A+ + + L FPS GV L++
Sbjct: 169 LFKLVYDTGFGTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKA 228
Query: 240 LVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVD 419
L++S QL+ AW++ GM S + N ++SLFI+ +C G K+L++MK+ G + D
Sbjct: 229 LLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKAD 288
Query: 420 VVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGR---LVEALG 590
V+A+TIVI ALCK +KVATS L+KMI G++ D VS+SS++DGYC GR + L
Sbjct: 289 VIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLN 348
Query: 591 FFKI 602
FF +
Sbjct: 349 FFNV 352
Score = 63.9 bits (154), Expect = 3e-08
Identities = 44/156 (28%), Positives = 71/156 (45%)
Frame = +3
Query: 117 SMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPS 296
++++ Y VG + A L M G PS Y LI KS + A + M
Sbjct: 395 TIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMML 454
Query: 297 RLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKV 476
L + V + I F G A +LL M+S G D V + +I +L RG+
Sbjct: 455 EGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNE 514
Query: 477 ATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEA 584
A L+++I+ G++PD ++ + ++DG+ G EA
Sbjct: 515 AKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEA 550
Score = 58.9 bits (141), Expect = 1e-06
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 3/176 (1%)
Frame = +3
Query: 96 SVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFF---PSAGVYVWLIQLLVKSRQLET 266
SV V S ++ Y G +D A+ L FF P+ VY + L K +
Sbjct: 321 SVDSVSVSSVIDGYCKKGRSDKAI------NLLNFFNVRPNIFVYSSFMTKLCKDGNMLE 374
Query: 267 AWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIG 446
A + F M L + ++ I +C G+ A + L +M G V +T++I
Sbjct: 375 ASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLIN 434
Query: 447 ALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFFKILGCA 614
A CK G + +A L +M+ G+ PD V+ + ++DG+ G L +A I+ A
Sbjct: 435 ACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSA 490
>gb|EMJ20675.1| hypothetical protein PRUPE_ppa021440mg, partial [Prunus persica]
Length = 675
Score = 132 bits (331), Expect = 1e-28
Identities = 77/200 (38%), Positives = 111/200 (55%), Gaps = 1/200 (0%)
Frame = +3
Query: 6 LDLVSGPATGAGDERH-HSVFDAMRETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRR 182
+DL+ GDE +S+ + + ET V CSMLV Y+ GM ++A+ +
Sbjct: 186 VDLILRLVRNHGDEESCNSLLEVLDETHSEIRVLETTCSMLVNGYIQEGMVNMALKIACQ 245
Query: 183 MGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGE 362
M L FPS G E AW+ M +R + N ++SLFI ++C+ G+
Sbjct: 246 MKHLNIFPSNG----------DQSSSELAWDFLEVMRTRGMGLNAAMMSLFINKYCSEGD 295
Query: 363 FGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSS 542
KLLL+MK+ G + DVV+FTIVI +LCK +L AT+ L+KM Q+G++PD V LSS
Sbjct: 296 LESGWKLLLEMKNYGIQPDVVSFTIVINSLCKMSYLNEATALLFKMTQLGISPDPVLLSS 355
Query: 543 IVDGYCSDGRLVEALGFFKI 602
I+DG+C G+ AL KI
Sbjct: 356 IIDGHCKLGQTEVALSILKI 375
Score = 59.7 bits (143), Expect = 6e-07
Identities = 42/154 (27%), Positives = 73/154 (47%)
Frame = +3
Query: 123 LVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPSRL 302
L+ Y+ G ++A S +M S G P + L+ + L+ + + M S
Sbjct: 458 LIDAYLKSGNMEMAEYSFHKMISEGLAPDIVTFNTLMDGFGRKGHLQKVFGLLDMMNSSN 517
Query: 303 LSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKVAT 482
+S + V + I T G A ++L ++ G +DVV FT +I K+G + A
Sbjct: 518 VSPDIVTYNTLIHSLVTRGFVIEAKEILFELIKRGFSLDVVTFTNLIDGFSKKGNFEEAF 577
Query: 483 SFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEA 584
+ M + V PD V+ S++++GYC + R+ EA
Sbjct: 578 FVWFYMSEHDVKPDVVTCSALLNGYCRERRIEEA 611
Score = 58.5 bits (140), Expect = 1e-06
Identities = 44/156 (28%), Positives = 69/156 (44%)
Frame = +3
Query: 117 SMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPS 296
S ++ Y V D A +M G P Y LI +KS +E A F M S
Sbjct: 421 STIIDGYCKVRDIDRAFQYFGKMLKNGITPCVTTYTSLIDAYLKSGNMEMAEYSFHKMIS 480
Query: 297 RLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKV 476
L+ + V + + F G LL M S D+V + +I +L RGF+
Sbjct: 481 EGLAPDIVTFNTLMDGFGRKGHLQKVFGLLDMMNSSNVSPDIVTYNTLIHSLVTRGFVIE 540
Query: 477 ATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEA 584
A L+++I+ G + D V+ ++++DG+ G EA
Sbjct: 541 AKEILFELIKRGFSLDVVTFTNLIDGFSKKGNFEEA 576
>ref|XP_004308191.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g19280-like [Fragaria vesca subsp. vesca]
Length = 599
Score = 130 bits (328), Expect = 2e-28
Identities = 72/190 (37%), Positives = 108/190 (56%)
Frame = +3
Query: 42 DERHHSVFDAMRETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVY 221
+E + + + + T V VCSMLV Y+ GM ++A+ FPS GV
Sbjct: 97 EETCNLLLEVLYGTHSETRVLETVCSMLVDQYIKEGMVNMALNVTYETKGQNIFPSGGVC 156
Query: 222 VWLIQLLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKS 401
L++ L++S QL AW+ M +R L N ++SLFI +FC G+ G KLL+DMK
Sbjct: 157 NTLLRALLESNQLNFAWDFLEVMQTRGLGLNSTIISLFIHKFCREGDLGSGFKLLVDMKK 216
Query: 402 CGGEVDVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVE 581
G + DVV + IVI +LC+ +LK AT+ L+KM Q+G++PD V +SS++ G+ S G +E
Sbjct: 217 YGIQPDVVXYAIVIDSLCRMSYLKEATTLLFKMTQLGISPDSVLISSVIHGH-SSGLFLE 275
Query: 582 ALGFFKILGC 611
F + C
Sbjct: 276 MSEFGLLPDC 285
Score = 56.2 bits (134), Expect = 7e-06
Identities = 41/161 (25%), Positives = 75/161 (46%)
Frame = +3
Query: 117 SMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPS 296
++++ Y G ++A + M S G P Y L+ + QL+ + V + S
Sbjct: 324 TLVMDAYCKSGDIEMAEYVFQAMLSEGVVPDIVTYNTLMDGFGRKGQLQKVFGVLDRINS 383
Query: 297 RLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKV 476
+S + V + I T G A ++++++ G +DV AFT VI K+G +
Sbjct: 384 SXVSPDVVTYNTLIHSLATRGFADEAKQIMIELIMRGFSLDVAAFTNVIDGFPKKGNFEE 443
Query: 477 ATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFFK 599
A + M + V PD V+ S++++GYC ++ A F+
Sbjct: 444 AFFVXFCMSEHEVKPDVVTCSALLNGYCRKHQMEHANVLFR 484
>gb|EXB44293.1| hypothetical protein L484_012212 [Morus notabilis]
Length = 710
Score = 130 bits (326), Expect = 4e-28
Identities = 71/187 (37%), Positives = 107/187 (57%)
Frame = +3
Query: 42 DERHHSVFDAMRETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVY 221
+E + + + + ET +F +VCSMLV CY+ + A+ ++ FPS V
Sbjct: 197 EESYSFLLEVLYETHTERMIFEIVCSMLVNCYIKEKCLNAALKLTCQLKQHNIFPSDRVS 256
Query: 222 VWLIQLLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKS 401
+++ L+ S+QLE AW+ + SR + N +SLFI +C G F KLL M+
Sbjct: 257 NAMLRELIGSKQLELAWDWLEIIQSRGMGLNASTISLFIHYYCKEGNFESGWKLLCRMRD 316
Query: 402 CGGEVDVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVE 581
G + DV+++TI+I ALCK ATS ++KM Q+G++PD V +SSIVDGY GR+ +
Sbjct: 317 YGVKPDVISYTIIIDALCKMSCPIEATSLVFKMTQLGISPDAVCVSSIVDGYSKVGRIDQ 376
Query: 582 ALGFFKI 602
AL KI
Sbjct: 377 ALKILKI 383
Score = 57.8 bits (138), Expect = 2e-06
Identities = 43/150 (28%), Positives = 67/150 (44%)
Frame = +3
Query: 135 YVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPSRLLSSN 314
Y VG + A L RM +G PS Y LI K +E A +F + + L +
Sbjct: 435 YCKVGDSQRAFQYLGRMLKVGVKPSVATYTVLIDTCCKCGNMEMAECLFWKLIADDLMPD 494
Query: 315 KVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKVATSFLY 494
VV + + + G +L MKS DVV + +I +L RGF+ A
Sbjct: 495 VVVYNSLMDGYGEKGHLQKVFELFDMMKSSNVCPDVVTYNTLIHSLVMRGFVNEAEDVFD 554
Query: 495 KMIQIGVTPDRVSLSSIVDGYCSDGRLVEA 584
++ + G PD V+ ++++DG+ G EA
Sbjct: 555 ELTERGFCPDVVTFTTLIDGFSKKGNFEEA 584
>gb|EOY19444.1| Pentatricopeptide repeat-containing protein, putative isoform 3
[Theobroma cacao]
Length = 533
Score = 120 bits (301), Expect = 3e-25
Identities = 65/170 (38%), Positives = 100/170 (58%)
Frame = +3
Query: 78 ETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQ 257
ET V VCSMLV CY+ +A+ +M S PS GV L++ L++ +
Sbjct: 32 ETHSDRMVLETVCSMLVDCYIKENEVGLALELACKMKSFNMIPSIGVCNSLLKALLELNE 91
Query: 258 LETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTI 437
L+ AW+ M + N +VSLFI ++C G+ A L++MK+ G + DVVA+TI
Sbjct: 92 LDLAWDFLDQMLRQGSGLNVAIVSLFIDKYCRKGQLLSAWTFLMEMKNYGIKPDVVAYTI 151
Query: 438 VIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEAL 587
+I +LCK L ATS L+K+ ++G++PD V +SS+V+G+C G+ EA+
Sbjct: 152 IIDSLCKVSCLGEATSLLFKITRLGISPDSVLVSSVVEGHCKAGKPKEAI 201
Score = 65.9 bits (159), Expect = 9e-09
Identities = 45/135 (33%), Positives = 64/135 (47%)
Frame = +3
Query: 180 RMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHG 359
+M G PS Y LI KS LE A +F M L + V + I + G
Sbjct: 273 KMLKCGIKPSVTTYTVLIDACCKSEDLEMAECLFQKMIMAGLVPDIVTFNTVIDGYGKKG 332
Query: 360 EFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLS 539
A LL M+S G DV + I+I +L +RGF A L +++Q G++PD V+ +
Sbjct: 333 HLHKAFMLLDMMRSAGISPDVTTYNIIIHSLIERGFTNEAKVILDELVQRGISPDMVTFT 392
Query: 540 SIVDGYCSDGRLVEA 584
+I+DG G EA
Sbjct: 393 NIIDGLSKKGDFEEA 407
Score = 56.2 bits (134), Expect = 7e-06
Identities = 37/127 (29%), Positives = 58/127 (45%)
Frame = +3
Query: 204 PSAGVYVWLIQLLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKL 383
P+ VY I L + A +F M L + V + I +C + A +
Sbjct: 211 PNIFVYNSFISKLCADGDMVEASLIFQDMFELGLLPDCVSYTTIIGGYCKDQDMNRAFQY 270
Query: 384 LLDMKSCGGEVDVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCS 563
M CG + V +T++I A CK L++A KMI G+ PD V+ ++++DGY
Sbjct: 271 FGKMLKCGIKPSVTTYTVLIDACCKSEDLEMAECLFQKMIMAGLVPDIVTFNTVIDGYGK 330
Query: 564 DGRLVEA 584
G L +A
Sbjct: 331 KGHLHKA 337
>gb|EOY19442.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao] gi|508727546|gb|EOY19443.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao]
Length = 661
Score = 120 bits (301), Expect = 3e-25
Identities = 65/170 (38%), Positives = 100/170 (58%)
Frame = +3
Query: 78 ETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQ 257
ET V VCSMLV CY+ +A+ +M S PS GV L++ L++ +
Sbjct: 160 ETHSDRMVLETVCSMLVDCYIKENEVGLALELACKMKSFNMIPSIGVCNSLLKALLELNE 219
Query: 258 LETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTI 437
L+ AW+ M + N +VSLFI ++C G+ A L++MK+ G + DVVA+TI
Sbjct: 220 LDLAWDFLDQMLRQGSGLNVAIVSLFIDKYCRKGQLLSAWTFLMEMKNYGIKPDVVAYTI 279
Query: 438 VIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEAL 587
+I +LCK L ATS L+K+ ++G++PD V +SS+V+G+C G+ EA+
Sbjct: 280 IIDSLCKVSCLGEATSLLFKITRLGISPDSVLVSSVVEGHCKAGKPKEAI 329
Score = 65.9 bits (159), Expect = 9e-09
Identities = 45/135 (33%), Positives = 64/135 (47%)
Frame = +3
Query: 180 RMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHG 359
+M G PS Y LI KS LE A +F M L + V + I + G
Sbjct: 401 KMLKCGIKPSVTTYTVLIDACCKSEDLEMAECLFQKMIMAGLVPDIVTFNTVIDGYGKKG 460
Query: 360 EFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLS 539
A LL M+S G DV + I+I +L +RGF A L +++Q G++PD V+ +
Sbjct: 461 HLHKAFMLLDMMRSAGISPDVTTYNIIIHSLIERGFTNEAKVILDELVQRGISPDMVTFT 520
Query: 540 SIVDGYCSDGRLVEA 584
+I+DG G EA
Sbjct: 521 NIIDGLSKKGDFEEA 535
Score = 56.2 bits (134), Expect = 7e-06
Identities = 37/127 (29%), Positives = 58/127 (45%)
Frame = +3
Query: 204 PSAGVYVWLIQLLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKL 383
P+ VY I L + A +F M L + V + I +C + A +
Sbjct: 339 PNIFVYNSFISKLCADGDMVEASLIFQDMFELGLLPDCVSYTTIIGGYCKDQDMNRAFQY 398
Query: 384 LLDMKSCGGEVDVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCS 563
M CG + V +T++I A CK L++A KMI G+ PD V+ ++++DGY
Sbjct: 399 FGKMLKCGIKPSVTTYTVLIDACCKSEDLEMAECLFQKMIMAGLVPDIVTFNTVIDGYGK 458
Query: 564 DGRLVEA 584
G L +A
Sbjct: 459 KGHLHKA 465
>ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331889|gb|EFH62308.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 755
Score = 119 bits (299), Expect = 5e-25
Identities = 65/170 (38%), Positives = 99/170 (58%)
Frame = +3
Query: 78 ETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQ 257
ET V V ML+ C + D+A+ ++ G FPS GV + L++ ++++
Sbjct: 259 ETRIDRRVLETVFCMLIDCCIKERKVDMALKLTYKIDQFGIFPSRGVCISLVEEILRAHG 318
Query: 258 LETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTI 437
LE A E M SR N ++SLFI+++C+ G F +LL+ MK G D+VAFT+
Sbjct: 319 LELAREFVEHMLSRGRHLNAALLSLFIRKYCSDGYFDKGWELLMGMKDYGIRPDIVAFTV 378
Query: 438 VIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEAL 587
I LCK GFL+ ATS L+K+ G++ D VS+SS++DG+C G+ EA+
Sbjct: 379 FIDKLCKAGFLREATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 428
Score = 61.2 bits (147), Expect = 2e-07
Identities = 48/195 (24%), Positives = 86/195 (44%)
Frame = +3
Query: 12 LVSGPATGAGDERHHSVFDAMRETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGS 191
++ G T ++ F A+ ++ S+ + ++L+ G A + R M +
Sbjct: 481 MIDGYCTLGRTDKAFQFFGALLKSGNPPSL--ITYTLLIGACSKFGSISDAESVFRIMKT 538
Query: 192 LGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGY 371
G P Y L+ K+ QL +E+ M S +S + ++ I G
Sbjct: 539 EGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDE 598
Query: 372 ACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVD 551
A +++ ++ G +AFT VIG L KRG + A + M + V PD V+ S+++
Sbjct: 599 ANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLH 658
Query: 552 GYCSDGRLVEALGFF 596
GYC R+ +A+ F
Sbjct: 659 GYCRAQRMEKAIVLF 673
>ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334184304|ref|NP_001189552.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g19280 gi|3135258|gb|AAC16458.1| putative
salt-inducible protein [Arabidopsis thaliana]
gi|330251769|gb|AEC06863.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|330251770|gb|AEC06864.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 693
Score = 118 bits (296), Expect = 1e-24
Identities = 70/185 (37%), Positives = 106/185 (57%), Gaps = 1/185 (0%)
Frame = +3
Query: 36 AGDERHHS-VFDAMRETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSA 212
+G+ER V + ET V V S+L+ C + ++A+ ++ G FPS
Sbjct: 177 SGEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSR 236
Query: 213 GVYVWLIQLLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLD 392
GV + L++ +++ LE A E M SR N V+SLFI+++C+ G F +LL+
Sbjct: 237 GVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMG 296
Query: 393 MKSCGGEVDVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGR 572
MK G D+VAFT+ I LCK GFLK ATS L+K+ G++ D VS+SS++DG+C G+
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 573 LVEAL 587
EA+
Sbjct: 357 PEEAI 361
Score = 61.2 bits (147), Expect = 2e-07
Identities = 44/174 (25%), Positives = 78/174 (44%)
Frame = +3
Query: 84 SRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLE 263
SR + V S+ ++ Y G D L M G P + I L K+ L+
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 264 TAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVI 443
A V + +S + V VS I FC G+ A KL+ + ++ ++ +
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL---RPNIFVYSSFL 380
Query: 444 GALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFFKIL 605
+C G + A++ ++ ++G+ PD V ++++DGYC+ GR +A +F L
Sbjct: 381 SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
>gb|AAS99720.1| At2g19280 [Arabidopsis thaliana] gi|62319953|dbj|BAD94048.1|
putative salt-inducible protein [Arabidopsis thaliana]
gi|110738808|dbj|BAF01327.1| putative salt-inducible
protein [Arabidopsis thaliana]
Length = 693
Score = 117 bits (292), Expect = 3e-24
Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 1/185 (0%)
Frame = +3
Query: 36 AGDERHHS-VFDAMRETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSA 212
+G+ER V + +T V V S+L+ C + ++A+ ++ G FPS
Sbjct: 177 SGEERSLCLVMKDLFKTRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSR 236
Query: 213 GVYVWLIQLLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLD 392
GV + L++ +++ LE A E M SR N V+SLFI+++C+ G F +LL+
Sbjct: 237 GVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMG 296
Query: 393 MKSCGGEVDVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGR 572
MK G D+VAFT+ I LCK GFLK ATS L+K+ G++ D VS+SS++DG+C G+
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 573 LVEAL 587
EA+
Sbjct: 357 PEEAI 361
Score = 61.2 bits (147), Expect = 2e-07
Identities = 44/174 (25%), Positives = 78/174 (44%)
Frame = +3
Query: 84 SRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLE 263
SR + V S+ ++ Y G D L M G P + I L K+ L+
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 264 TAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVI 443
A V + +S + V VS I FC G+ A KL+ + ++ ++ +
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL---RPNIFVYSSFL 380
Query: 444 GALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFFKIL 605
+C G + A++ ++ ++G+ PD V ++++DGYC+ GR +A +F L
Sbjct: 381 SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
>ref|XP_006300135.1| hypothetical protein CARUB_v10016364mg [Capsella rubella]
gi|482568844|gb|EOA33033.1| hypothetical protein
CARUB_v10016364mg [Capsella rubella]
Length = 696
Score = 115 bits (287), Expect = 1e-23
Identities = 66/176 (37%), Positives = 99/176 (56%)
Frame = +3
Query: 60 VFDAMRETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQL 239
V + + ET V V +L+ C V D+A+ +M G FPS GV V L++
Sbjct: 194 VMNDLFETRIDRRVLETVFCILIDCCVKERKTDMALKLTYKMDQFGIFPSPGVCVSLLED 253
Query: 240 LVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVD 419
+++ LE A E M SR N V+SLF+ ++C+ G F +LL+ M G D
Sbjct: 254 ILRVHGLELAREFVELMLSRGRHLNASVLSLFVSKYCSDGYFDKGWELLMGMNYYGIRPD 313
Query: 420 VVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEAL 587
+VAFT++ LCK GFLK AT+ L+K+ G++ D VS+SS++DG+C G+ EA+
Sbjct: 314 IVAFTVLANKLCKAGFLKEATAILFKLKHFGISLDSVSVSSVIDGFCKVGKPEEAI 369
>tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 91.3 bits (225), Expect = 2e-16
Identities = 52/160 (32%), Positives = 83/160 (51%)
Frame = +3
Query: 117 SMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPS 296
S+L+K Y + GM D A+ M G P Y +I L + +++ A E F M
Sbjct: 402 SVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMID 461
Query: 297 RLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKV 476
+ ++ +K IQ FCTHG A +L+L++ + G +D+V F+ +I LCK G +
Sbjct: 462 QGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMD 521
Query: 477 ATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFF 596
A + + +G PD V S ++DGYC G++ +AL F
Sbjct: 522 AQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVF 561
Score = 62.0 bits (149), Expect = 1e-07
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Frame = +3
Query: 108 VVCSMLVKCYVDVGMADVAV-ASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFV 284
++ + L+K + + D A+ L R LG P Y L++ L + A ++
Sbjct: 151 IIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 210
Query: 285 GMPS--RLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCK 458
M + S + V + I F G+ AC L +M G D+V ++ V+ ALCK
Sbjct: 211 MMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCK 270
Query: 459 RGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFFK 599
+ A +FL +M+ GV PD + ++++ GY S G+ EA+ FK
Sbjct: 271 ARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK 317
Score = 56.6 bits (135), Expect = 5e-06
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 3/183 (1%)
Frame = +3
Query: 66 DAMRETSRSGSVFG---VVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQ 236
D +R + G+V V + ++ C+ G + A + M G P Y ++
Sbjct: 207 DLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVH 266
Query: 237 LLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEV 416
L K+R + A M ++ + + + I + + G++ A ++ +M+
Sbjct: 267 ALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP 326
Query: 417 DVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFF 596
DVV +++G+LCK G +K A M G PD S +++GY + G LV+ F
Sbjct: 327 DVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLF 386
Query: 597 KIL 605
++
Sbjct: 387 DLM 389
>ref|XP_006657951.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63130,
mitochondrial-like isoform X1 [Oryza brachyantha]
gi|573951334|ref|XP_006657952.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g63130,
mitochondrial-like isoform X2 [Oryza brachyantha]
Length = 726
Score = 89.4 bits (220), Expect = 7e-16
Identities = 54/183 (29%), Positives = 90/183 (49%)
Frame = +3
Query: 57 SVFDAMRETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQ 236
S+FD M+ T S +V+ M + + D + A L M +G P+ Y +
Sbjct: 195 SLFDDMKSTGPSPNVYSYSILMSMYTHGDKLCLEEAFDLLCEMKIIGMEPTVATYGTYLY 254
Query: 237 LLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEV 416
L ++RQ+++AW+ + R N + I FC + A K+ +MK CG
Sbjct: 255 GLCRARQVKSAWDFLQVLRQRGYPCNSYCFNAVIHGFCNKNQVHEAMKVFDEMKKCGFVP 314
Query: 417 DVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFF 596
DV +++I++ LCK+G L L +M + GV+P SS++ G+C G++ EAL F
Sbjct: 315 DVHSYSILVDGLCKQGDLMSGCVLLAEMARTGVSPTPTCYSSLLHGFCKAGKVEEALELF 374
Query: 597 KIL 605
+ L
Sbjct: 375 ECL 377
Score = 59.7 bits (143), Expect = 6e-07
Identities = 41/164 (25%), Positives = 69/164 (42%)
Frame = +3
Query: 108 VVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVG 287
V C++LV ++ G+ A L + P+ Y +I L K + + W F
Sbjct: 457 VTCTILVDSFMKEGLISEAFLFLDEVRRFDIVPNLYTYKVIINGLFKGNESDDVWGFFGN 516
Query: 288 MPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGF 467
M R + V+ S+ I F A +L M G ++ +T +I LC
Sbjct: 517 MIKRGYIPDVVLYSIIIDGFVKALNLQEAFRLYHKMLDEGTMPNIFTYTSLINGLCHDDR 576
Query: 468 LKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFFK 599
L L M+ G+TPDR+ +S++ YC + +A+ F+
Sbjct: 577 LPEMIPLLKNMVLEGLTPDRILYTSLIACYCKCSNMKKAMEIFR 620
>gb|EOY05933.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 609
Score = 88.6 bits (218), Expect = 1e-15
Identities = 63/178 (35%), Positives = 89/178 (50%)
Frame = +3
Query: 72 MRETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKS 251
M E++ G++ V SM++ + GM D AV M S G P VY LI L +
Sbjct: 186 MEESNYEGTL--VTYSMIIDAFCKDGMVDEAVGLFLEMVSKGITPDVVVYGSLIDGLCRL 243
Query: 252 RQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAF 431
+L+ A F M S L+++ V+ + I FC G A K+ M G DVV F
Sbjct: 244 GRLKEAVNFFDEMVSGGLTADLVMYNSLIHGFCQAGMLEEATKIFNLMVRKGISPDVVTF 303
Query: 432 TIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFFKIL 605
TI+I LCK G + A L MIQ G PD + +S++ G+CS G+L EA F ++
Sbjct: 304 TILIDCLCKEGKMGEAQGILDLMIQQGKEPDIRTYNSLISGFCSTGQLDEATKLFGLI 361
Score = 72.8 bits (177), Expect = 7e-11
Identities = 53/166 (31%), Positives = 74/166 (44%)
Frame = +3
Query: 108 VVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVG 287
V S+L+K G AV +M GF + LI L K R+ E+
Sbjct: 126 VTVSILLKGLCANGKGLDAVQVFDKMRESGFQGDGVTFGILINGLCKIREPALGLELHRK 185
Query: 288 MPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGF 467
M V S+ I FC G A L L+M S G DVV + +I LC+ G
Sbjct: 186 MEESNYEGTLVTYSMIIDAFCKDGMVDEAVGLFLEMVSKGITPDVVVYGSLIDGLCRLGR 245
Query: 468 LKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFFKIL 605
LK A +F +M+ G+T D V +S++ G+C G L EA F ++
Sbjct: 246 LKEAVNFFDEMVSGGLTADLVMYNSLIHGFCQAGMLEEATKIFNLM 291
Score = 61.6 bits (148), Expect = 2e-07
Identities = 40/134 (29%), Positives = 61/134 (45%)
Frame = +3
Query: 195 GFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYA 374
GF P L++ L + + A +VF M + V + I C E
Sbjct: 120 GFEPDLVTVSILLKGLCANGKGLDAVQVFDKMRESGFQGDGVTFGILINGLCKIREPALG 179
Query: 375 CKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDG 554
+L M+ E +V ++++I A CK G + A +M+ G+TPD V S++DG
Sbjct: 180 LELHRKMEESNYEGTLVTYSMIIDAFCKDGMVDEAVGLFLEMVSKGITPDVVVYGSLIDG 239
Query: 555 YCSDGRLVEALGFF 596
C GRL EA+ FF
Sbjct: 240 LCRLGRLKEAVNFF 253
Score = 60.1 bits (144), Expect = 5e-07
Identities = 39/160 (24%), Positives = 64/160 (40%)
Frame = +3
Query: 108 VVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVG 287
V + L+ A M G FP Y ++ L K+ +E A ++F
Sbjct: 406 VTYNTLIGALCQARRVSTAQKMFNEMHVYGQFPILSTYTVMLDGLCKNGHIEEAMDLFHS 465
Query: 288 MPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGF 467
+ S S+ I C G A K+ +++ G DVV + I+ LC++G
Sbjct: 466 LESTEYKPGVEFFSILIDGMCKAGRLEEARKMFIEISEKGLVPDVVTYNIMFSGLCRKGM 525
Query: 468 LKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEAL 587
A L +M + G PD +S + I+ G D + A+
Sbjct: 526 SLEADKLLTEMEEKGCLPDSISFNIIIHGLLRDKEVQRAM 565
>ref|XP_004979582.1| PREDICTED: protein Rf1, mitochondrial-like isoform X1 [Setaria
italica] gi|514809522|ref|XP_004979583.1| PREDICTED:
protein Rf1, mitochondrial-like isoform X2 [Setaria
italica] gi|514809524|ref|XP_004979584.1| PREDICTED:
protein Rf1, mitochondrial-like isoform X3 [Setaria
italica]
Length = 811
Score = 88.2 bits (217), Expect = 2e-15
Identities = 52/162 (32%), Positives = 83/162 (51%)
Frame = +3
Query: 111 VCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGM 290
+ ++L+K Y GM D A+ M G P A Y+ +I + +++ A E+F M
Sbjct: 392 IFNVLIKGYAKCGMLDRAMIIFSEMRHQGAKPDAVTYLTVIAAHCRMAKMDDAMEIFNEM 451
Query: 291 PSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFL 470
+ ++ + IQ FCTHG A +L+ +M S G D+V +I +LCK G +
Sbjct: 452 IDQGVAPSIATYQCLIQGFCTHGGLLKAKELVFEMMSKGMRPDIVHLNSIINSLCKEGRV 511
Query: 471 KVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFF 596
A ++ IG+ PD + SS+VDGYC G++ +AL F
Sbjct: 512 VDAQDIFDLLVSIGLHPDVFAYSSLVDGYCLVGKMEKALRVF 553
Score = 62.8 bits (151), Expect = 7e-08
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 3/167 (1%)
Frame = +3
Query: 108 VVCSMLVKCYVDVGMADVAV-ASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFV 284
+ S L+K + D A+ L RM LG P+ Y L++ +R A E+
Sbjct: 143 ITFSNLLKGLCEAKRTDDALDVLLHRMPELGCVPNVVSYSILLKSFCDNRDSRRALELLR 202
Query: 285 GMPSRL--LSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCK 458
M + S N V S I F GE C L+ +M G D+V + I ALCK
Sbjct: 203 RMAEKGSGCSPNVVSYSTVIDGFFKEGEVDKGCNLMNEMMQQGISPDLVTYNSSIDALCK 262
Query: 459 RGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFFK 599
+ A + L +M++ GV PD S ++++ Y + G EA+ FK
Sbjct: 263 ARAMDKAEAVLRQMVRKGVRPDNWSYNNLIFAYSARGEWNEAVRIFK 309
>tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 88.2 bits (217), Expect = 2e-15
Identities = 50/160 (31%), Positives = 84/160 (52%)
Frame = +3
Query: 117 SMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPS 296
++L+K Y + GM D A+ M G P Y +I L + +++ A E F M
Sbjct: 411 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 470
Query: 297 RLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKV 476
+ ++ +K + IQ FCTHG A +L+ ++ + G +D+V F+ +I LCK G +
Sbjct: 471 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 530
Query: 477 ATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFF 596
A + + +G+ PD V S ++DGYC G++ +AL F
Sbjct: 531 AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVF 570
Score = 58.2 bits (139), Expect = 2e-06
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
Frame = +3
Query: 108 VVCSMLVKCYVDVGMADVAV-ASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFV 284
++ + L++ + + D A+ L R LG P Y L++ L + A ++
Sbjct: 160 IIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 219
Query: 285 GMPS--RLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCK 458
M + S N V + I F G+ AC L +M G D+V + V+ ALCK
Sbjct: 220 MMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK 279
Query: 459 RGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFFK 599
+ A +FL +M+ V P+ + ++++ GY S G+ EA+ FK
Sbjct: 280 ARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 326
Score = 57.8 bits (138), Expect = 2e-06
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
Frame = +3
Query: 105 GVVCSMLVKCYVDV-------GMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLE 263
G VCS V Y V G + A + M G P Y ++ L K+R ++
Sbjct: 225 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 284
Query: 264 TAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVI 443
A M ++ + N + I + + G++ A ++ +M+ DVV ++++
Sbjct: 285 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 344
Query: 444 GALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFFKIL 605
G+LCK G +K A M G PD S + +++GY + G LV+ F ++
Sbjct: 345 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 398
>gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 88.2 bits (217), Expect = 2e-15
Identities = 50/160 (31%), Positives = 84/160 (52%)
Frame = +3
Query: 117 SMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPS 296
++L+K Y + GM D A+ M G P Y +I L + +++ A E F M
Sbjct: 398 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 457
Query: 297 RLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKV 476
+ ++ +K + IQ FCTHG A +L+ ++ + G +D+V F+ +I LCK G +
Sbjct: 458 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 517
Query: 477 ATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFF 596
A + + +G+ PD V S ++DGYC G++ +AL F
Sbjct: 518 AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVF 557
Score = 58.2 bits (139), Expect = 2e-06
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
Frame = +3
Query: 108 VVCSMLVKCYVDVGMADVAV-ASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFV 284
++ + L++ + + D A+ L R LG P Y L++ L + A ++
Sbjct: 147 IIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 206
Query: 285 GMPS--RLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCK 458
M + S N V + I F G+ AC L +M G D+V + V+ ALCK
Sbjct: 207 MMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK 266
Query: 459 RGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFFK 599
+ A +FL +M+ V P+ + ++++ GY S G+ EA+ FK
Sbjct: 267 ARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313
Score = 57.8 bits (138), Expect = 2e-06
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
Frame = +3
Query: 105 GVVCSMLVKCYVDV-------GMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLE 263
G VCS V Y V G + A + M G P Y ++ L K+R ++
Sbjct: 212 GAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMD 271
Query: 264 TAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVI 443
A M ++ + N + I + + G++ A ++ +M+ DVV ++++
Sbjct: 272 KAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331
Query: 444 GALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFFKIL 605
G+LCK G +K A M G PD S + +++GY + G LV+ F ++
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 385
>ref|XP_004979523.1| PREDICTED: protein Rf1, mitochondrial-like [Setaria italica]
Length = 814
Score = 87.8 bits (216), Expect = 2e-15
Identities = 51/162 (31%), Positives = 84/162 (51%)
Frame = +3
Query: 111 VCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGM 290
+ ++L+K Y GM D A+ M G P+ Y+ +I + +++ A E+F M
Sbjct: 395 IFNVLIKGYAKCGMLDRAMIIFSEMRQQGAKPNVVTYLTVIAAHCRMAKMDDAMEIFNEM 454
Query: 291 PSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFL 470
+ ++ + IQ FCTHG A +L+ +M S G D+V T +I +LCK G +
Sbjct: 455 IDQGVAPSIATYQCLIQGFCTHGGLLKAKELVFEMMSKGMRPDIVFLTSIINSLCKEGRV 514
Query: 471 KVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFF 596
A ++ IG+ PD + SS++DGYC G++ +AL F
Sbjct: 515 VDAQDIFDILVSIGLHPDVFAYSSLMDGYCLVGKMEKALRVF 556
Score = 57.8 bits (138), Expect = 2e-06
Identities = 45/144 (31%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Frame = +3
Query: 174 LRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPSRLL--SSNKVVVSLFIQEF 347
L RM G P+ Y L++ SR+ A E+ M + S N V S I F
Sbjct: 169 LHRMPEFGCVPNVFSYNILMKSFCDSRESRRALELLRRMAEKGAGCSPNVVSYSTVIDGF 228
Query: 348 CTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDR 527
GE C LL +M G ++V + I ALCK + A L +MI+ GV PD
Sbjct: 229 FKEGEVDKGCDLLNEMMQQGISPNLVTYNSSIDALCKARAMDKAEVVLRQMIRKGVHPDN 288
Query: 528 VSLSSIVDGYCSDGRLVEALGFFK 599
S ++++ Y + G E + FK
Sbjct: 289 WSYTNLMFAYSASGEWNEVVRIFK 312
Score = 55.8 bits (133), Expect = 9e-06
Identities = 35/139 (25%), Positives = 61/139 (43%)
Frame = +3
Query: 189 SLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFG 368
S+G P Y L+ ++E A VF M S + N V + +C G
Sbjct: 526 SIGLHPDVFAYSSLMDGYCLVGKMEKALRVFDAMVSAGIEPNVAVYGTLVNGYCKIGRID 585
Query: 369 YACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIV 548
+ +M G + +A+ IV+ L + G A ++MI+ G++ D + ++++
Sbjct: 586 DGLSVFREMVHKGIKPSTIAYNIVLDGLFRAGRTVSAKERFHEMIESGISVDTGTYNTVL 645
Query: 549 DGYCSDGRLVEALGFFKIL 605
G C + EA+G FK L
Sbjct: 646 HGLCKNNSFDEAIGLFKKL 664
>ref|XP_004958297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like isoform X1 [Setaria italica]
gi|514735997|ref|XP_004958298.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g01110-like isoform X2 [Setaria italica]
gi|514736001|ref|XP_004958299.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g01110-like isoform X3 [Setaria italica]
Length = 716
Score = 87.8 bits (216), Expect = 2e-15
Identities = 55/183 (30%), Positives = 90/183 (49%)
Frame = +3
Query: 57 SVFDAMRETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQ 236
S+FD M+ + S +V+ M + + + + A LR M G P+A Y +
Sbjct: 195 SLFDDMKSSGPSPNVYSYSVLMSMYTHGERLCLEEAFELLREMEMNGVRPNAATYGTYLY 254
Query: 237 LLVKSRQLETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEV 416
L +SRQ+ +AW+ + R N + I FC+ G+ A ++ MK CG
Sbjct: 255 GLCRSRQVTSAWDFLQNLCQRGCPCNTYCFNAVIHGFCSEGQVHKAIEVFNGMKKCGFLP 314
Query: 417 DVVAFTIVIGALCKRGFLKVATSFLYKMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFF 596
DV +++I++ LCK+G L L +M + G++P+ VS SS++ G C G + A F
Sbjct: 315 DVHSYSILVDGLCKQGELLKGYDMLDEMARNGISPNHVSYSSLLHGLCKTGNVEFAFEIF 374
Query: 597 KIL 605
K L
Sbjct: 375 KRL 377
>ref|XP_006409070.1| hypothetical protein EUTSA_v10023028mg, partial [Eutrema
salsugineum] gi|557110232|gb|ESQ50523.1| hypothetical
protein EUTSA_v10023028mg, partial [Eutrema salsugineum]
Length = 562
Score = 87.4 bits (215), Expect = 3e-15
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 38/214 (17%)
Frame = +3
Query: 78 ETSRSGSVFGVVCSMLVKCYVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQ 257
ET V V SMLV C V D+A+ +M G FPS GV + L++ +++
Sbjct: 98 ETRSDRRVLEAVFSMLVDCCVQERKVDMALKLTYKMDQFGIFPSRGVCISLLKQILRIHG 157
Query: 258 LETAWEVFVGMPSRLLSSNKVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFT- 434
LE A E M S N V+SLFI ++C G F +LL+ MK G DVVAFT
Sbjct: 158 LELAHEFVEHMISGRRHLNAAVLSLFISKYCFDGCFDKGWELLIGMKQYGIRPDVVAFTD 217
Query: 435 -------------------------------------IVIGALCKRGFLKVATSFLYKMI 503
+ +C G + A++ ++
Sbjct: 218 SVSVSSVIEGFCKVGKPEEAVKLIHYFRLRPNIFVYSSFLSKICNEGDMLKASTIFQEIF 277
Query: 504 QIGVTPDRVSLSSIVDGYCSDGRLVEALGFFKIL 605
++G+ PD VS ++++ GYC G++ +A +F L
Sbjct: 278 ELGLLPDCVSYTTMIGGYCKSGKIDKAFQYFGAL 311
Score = 66.2 bits (160), Expect = 7e-09
Identities = 48/154 (31%), Positives = 73/154 (47%)
Frame = +3
Query: 135 YVDVGMADVAVASLRRMGSLGFFPSAGVYVWLIQLLVKSRQLETAWEVFVGMPSRLLSSN 314
Y +VG A+ A LR M + G P Y L+ K+ QL +E+ GM S +S +
Sbjct: 333 YGNVGDAE---ALLRNMKTEGLVPDVVTYNNLMHGYGKTHQLNKVFELVDGMRSAGISPD 389
Query: 315 KVVVSLFIQEFCTHGEFGYACKLLLDMKSCGGEVDVVAFTIVIGALCKRGFLKVATSFLY 494
++ I T G A ++ ++ G D AFT VIG K+G + A +
Sbjct: 390 VATYNILIHSMVTRGYVDEANGIISELVRRGFVPDAFAFTDVIGGFSKKGDFQEAFLLWF 449
Query: 495 KMIQIGVTPDRVSLSSIVDGYCSDGRLVEALGFF 596
M + V PD V+ S+++ GYC R+ EA+ F
Sbjct: 450 YMADLRVKPDVVTCSALLHGYCRAQRMGEAIVLF 483