BLASTX nr result

ID: Stemona21_contig00017195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00017195
         (602 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605589.1| Cytochrome b559 subunit alpha [Medicago trun...   127   1e-58
ref|XP_004987318.1| PREDICTED: cytochrome b559 subunit alpha-lik...   129   1e-54
ref|XP_003606015.1| Cytochrome b559 subunit alpha [Medicago trun...   125   7e-53
ref|XP_002888378.1| hypothetical protein ARALYDRAFT_894035 [Arab...   124   6e-49
gb|EPS73485.1| cytochrome b559 subunit alpha [Genlisea aurea]          97   9e-42
gb|EPS73280.1| cytochrome b559 subunit alpha, partial [Genlisea ...   122   8e-31
ref|NP_039403.1| photosystem II protein V [Oryza sativa Japonica...   134   1e-29
gb|EHK62729.1| hypothetical protein M3S_K11, partial [Sorghum bi...   134   1e-29
ref|YP_008757458.1| cytochrome b559 subunit alpha (chloroplast) ...   134   1e-29
gb|AAN32308.1| cytochrome b-559 alpha subunit, partial (chloropl...   134   1e-29
gb|EMS57323.1| Cytochrome b559 subunit alpha [Triticum urartu]        134   2e-29
gb|AGC38262.1| photosystem II protein V (chloroplast) [Cryptochl...   134   2e-29
gb|AFA27506.1| photosystem II cytochrome b559 alpha subunit, par...   133   3e-29
gb|AAS18725.1| cytochrome b-559 alpha subunit [Xyris jupicai]         133   3e-29
ref|YP_007475978.1| photosystem II cytochrome b559 alpha subunit...   133   4e-29
ref|YP_001531299.1| psbE gene product (chloroplast) [Lolium pere...   132   6e-29
gb|AFA27507.1| photosystem II cytochrome b559 alpha subunit, par...   132   7e-29
gb|ABR21952.1| cytochrome b-559 alpha subunit [Bouteloua curtipe...   132   7e-29
gb|ABO36226.1| cytochrome b-559 alpha subunit protein [Aphelia b...   132   7e-29
gb|ABJ52168.1| PsbE [Phyllostachys edulis]                            132   7e-29

>ref|XP_003605589.1| Cytochrome b559 subunit alpha [Medicago truncatula]
           gi|355506644|gb|AES87786.1| Cytochrome b559 subunit
           alpha [Medicago truncatula]
          Length = 153

 Score =  127 bits (320), Expect(2) = 1e-58
 Identities = 62/72 (86%), Positives = 64/72 (88%), Gaps = 1/72 (1%)
 Frame = +3

Query: 255 WLFMD*LYLP-FFFWGQYQQCSSSNDKPNSNYRAMTQSNPNEQNVELNRTSLYWGLLLIF 431
           WL +  L +P  FFW QYQQCSSSNDKPN NYRAMTQSNPNEQNVELNRTSLYWGLLLIF
Sbjct: 82  WLAVHGLAVPTVFFWDQYQQCSSSNDKPNPNYRAMTQSNPNEQNVELNRTSLYWGLLLIF 141

Query: 432 VLAVLFSNYFFN 467
           VLAVLFSNYFFN
Sbjct: 142 VLAVLFSNYFFN 153



 Score =  125 bits (314), Expect(2) = 1e-58
 Identities = 59/62 (95%), Positives = 60/62 (96%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           W+IHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLIT RFDSLEQLDEF
Sbjct: 20  WIIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEF 79

Query: 187 SR 192
            R
Sbjct: 80  IR 81


>ref|XP_004987318.1| PREDICTED: cytochrome b559 subunit alpha-like [Setaria italica]
           gi|514825361|ref|XP_004987334.1| PREDICTED: cytochrome
           b559 subunit alpha-like [Setaria italica]
          Length = 136

 Score =  129 bits (323), Expect(2) = 1e-54
 Identities = 61/62 (98%), Positives = 61/62 (98%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF
Sbjct: 20  WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 79

Query: 187 SR 192
            R
Sbjct: 80  MR 81



 Score =  111 bits (277), Expect(2) = 1e-54
 Identities = 52/56 (92%), Positives = 54/56 (96%)
 Frame = +3

Query: 300 QYQQCSSSNDKPNSNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 467
           ++ QCSSSNDKPNSNYR MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Sbjct: 81  RWLQCSSSNDKPNSNYRTMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 136


>ref|XP_003606015.1| Cytochrome b559 subunit alpha [Medicago truncatula]
           gi|355507070|gb|AES88212.1| Cytochrome b559 subunit
           alpha [Medicago truncatula]
          Length = 136

 Score =  125 bits (314), Expect(2) = 7e-53
 Identities = 59/62 (95%), Positives = 60/62 (96%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           W+IHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLIT RFDSLEQLDEF
Sbjct: 20  WIIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEF 79

Query: 187 SR 192
            R
Sbjct: 80  IR 81



 Score =  108 bits (270), Expect(2) = 7e-53
 Identities = 51/56 (91%), Positives = 53/56 (94%)
 Frame = +3

Query: 300 QYQQCSSSNDKPNSNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 467
           ++ QCSSSNDKPN NYRA TQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Sbjct: 81  RWLQCSSSNDKPNPNYRATTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 136


>ref|XP_002888378.1| hypothetical protein ARALYDRAFT_894035 [Arabidopsis lyrata subsp.
           lyrata] gi|297334219|gb|EFH64637.1| hypothetical protein
           ARALYDRAFT_894035 [Arabidopsis lyrata subsp. lyrata]
          Length = 136

 Score =  124 bits (311), Expect(3) = 6e-49
 Identities = 59/62 (95%), Positives = 59/62 (95%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLIT RFD LEQLDEF
Sbjct: 20  WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDPLEQLDEF 79

Query: 187 SR 192
            R
Sbjct: 80  MR 81



 Score = 79.0 bits (193), Expect(3) = 6e-49
 Identities = 37/39 (94%), Positives = 38/39 (97%)
 Frame = +3

Query: 351 AMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 467
           AMTQSNPNEQ+VELNRTSLYWGLL IFVLAVLFSNYFFN
Sbjct: 98  AMTQSNPNEQSVELNRTSLYWGLLFIFVLAVLFSNYFFN 136



 Score = 38.5 bits (88), Expect(3) = 6e-49
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +2

Query: 245 VRWLAVHGLAVPTVFFLGSIS 307
           +RWLAVHGLAVPTV FLG+++
Sbjct: 80  MRWLAVHGLAVPTVSFLGAMT 100


>gb|EPS73485.1| cytochrome b559 subunit alpha [Genlisea aurea]
          Length = 131

 Score = 96.7 bits (239), Expect(3) = 9e-42
 Identities = 41/49 (83%), Positives = 47/49 (95%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITD 153
           WVIHS+TIPSLF+AGW+FVSTGLAYD+FG+PRPNEYFTE+RQ  PLITD
Sbjct: 20  WVIHSVTIPSLFVAGWIFVSTGLAYDIFGTPRPNEYFTEARQEAPLITD 68



 Score = 66.2 bits (160), Expect(3) = 9e-42
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = +2

Query: 206 PPMTIDRTYPIFTVRWLAVHGLAVPTVFFLGSISAMQFIQ 325
           P +T   TYPIFT RWLAVH LA+PTVFF+GSISAMQFIQ
Sbjct: 64  PLITDPITYPIFTFRWLAVHALAIPTVFFIGSISAMQFIQ 103



 Score = 54.7 bits (130), Expect(3) = 9e-42
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = +3

Query: 384 VELNRTSLYWGLLLIFVLAVLFSNYFFN 467
           +ELNRTSLYWGLLLIFVLAVLFS+Y FN
Sbjct: 104 LELNRTSLYWGLLLIFVLAVLFSSYIFN 131


>gb|EPS73280.1| cytochrome b559 subunit alpha, partial [Genlisea aurea]
          Length = 95

 Score =  122 bits (307), Expect(2) = 8e-31
 Identities = 59/62 (95%), Positives = 59/62 (95%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLIT RFDSLEQL EF
Sbjct: 20  WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLAEF 79

Query: 187 SR 192
            R
Sbjct: 80  IR 81



 Score = 37.4 bits (85), Expect(2) = 8e-31
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +2

Query: 245 VRWLAVHGLAVPTVFF 292
           +RWLAVHGLAVPTVFF
Sbjct: 80  IRWLAVHGLAVPTVFF 95


>ref|NP_039403.1| photosystem II protein V [Oryza sativa Japonica Group]
           gi|11467208|ref|NP_043041.1| photosystem II protein V
           [Zea mays] gi|48478787|ref|YP_024395.1| photosystem II
           protein V [Saccharum hybrid cultivar SP-80-3280]
           gi|50233989|ref|YP_052767.1| photosystem II protein V
           [Oryza nivara] gi|50812544|ref|YP_054647.1| photosystem
           II protein V [Saccharum hybrid cultivar NCo 310]
           gi|118430319|ref|YP_874753.1| photosystem II protein V
           [Agrostis stolonifera] gi|118430404|ref|YP_874669.1|
           photosystem II cytochrome b559 alpha subunit [Hordeum
           vulgare subsp. vulgare] gi|118614509|ref|YP_899424.1|
           photosystem II cytochrome b559 alpha subunit [Sorghum
           bicolor] gi|126507954|ref|YP_654226.2| photosystem II
           protein V [Oryza sativa Indica Group]
           gi|194033165|ref|YP_002000503.1| photosystem II protein
           V [Brachypodium distachyon]
           gi|253729573|ref|YP_003029756.1| PsbE [Bambusa oldhamii]
           gi|255961399|ref|YP_003097592.1| photosystem II
           cytochrome b559 alpha subunit [Dendrocalamus latiflorus]
           gi|260677435|ref|YP_003208203.1| photosystem II
           cytochrome b559 alpha subunit [Coix lacryma-jobi]
           gi|339906468|ref|YP_004733261.1| photosystem II
           cytochrome b559 alpha subunit [Indocalamus longiauritus]
           gi|340034043|ref|YP_004733595.1| photosystem II
           cytochrome b559 alpha subunit [Phyllostachys edulis]
           gi|340034214|ref|YP_004733777.1| photosystem II
           cytochrome b559 alpha subunit [Acidosasa purpurea]
           gi|340034382|ref|YP_004733995.1| photosystem II
           cytochrome b559 alpha subunit [Phyllostachys nigra var.
           henonis] gi|340034467|ref|YP_004734118.1| photosystem II
           cytochrome b559 alpha subunit [Bambusa emeiensis]
           gi|340034553|ref|YP_004734202.1| photosystem II
           cytochrome b559 alpha subunit [Ferrocalamus
           rimosivaginus] gi|345895233|ref|YP_004841965.1|
           photosystem II cytochrome b559 alpha subunit [Panicum
           virgatum] gi|374249283|ref|YP_005088026.1| psbE gene
           product [Leersia tisserantii]
           gi|374249367|ref|YP_005088549.1| psbE gene product
           (chloroplast) [Phyllostachys propinqua]
           gi|374249636|ref|YP_005089163.1| psbE gene product
           [Rhynchoryza subulata] gi|378758431|ref|YP_005296435.1|
           psbE gene product (chloroplast) [Oryza meridionalis]
           gi|386799187|ref|YP_006280776.1| psbE gene product
           (chloroplast) [Oryza rufipogon]
           gi|426406655|ref|YP_007026569.1| photosystem II
           cytochrome b559 alpha subunit [Festuca ovina]
           gi|427436991|ref|YP_007026483.1| photosystem II
           cytochrome b559 alpha subunit [Festuca altissima]
           gi|452849499|ref|YP_007475156.1| photosystem II protein
           V (chloroplast) [Arundinaria gigantea]
           gi|525778521|ref|YP_008239109.1| photosystem II
           cytochrome b559 alpha subunit (chloroplast) [Triticum
           monococcum] gi|525782232|ref|YP_008239188.1| photosystem
           II cytochrome b559 alpha subunit (chloroplast) [Secale
           cereale] gi|533310121|ref|YP_008474316.1| photosystem II
           cytochrome b559 alpha subunit (chloroplast) [Aegilops
           tauschii] gi|533310217|ref|YP_008474407.1| photosystem
           II cytochrome b559 alpha subunit (chloroplast) [Aegilops
           speltoides] gi|558603687|ref|YP_008815767.1| photosystem
           II cytochrome b559 alpha subunit [Setaria italica]
           gi|563354796|ref|YP_008855107.1| photosystem II
           cytochrome b559 alpha subunit (chloroplast) [Phragmites
           australis] gi|568245012|ref|YP_008963920.1| photosystem
           II cytochrome b559 alpha subunit (chloroplast) [Aegilops
           geniculata] gi|568247010|ref|YP_008963843.1| photosystem
           II cytochrome b559 alpha subunit (chloroplast) [Aegilops
           cylindrica] gi|60390390|sp|Q6ENF6.3|PSBE_ORYNI RecName:
           Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
           reaction center subunit V
           gi|60390395|sp|Q6ENU7.3|PSBE_SACOF RecName:
           Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
           reaction center subunit V
           gi|60392969|sp|P69386.2|PSBE_WHEAT RecName:
           Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
           reaction center subunit V
           gi|60392970|sp|P69387.2|PSBE_SECCE RecName:
           Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
           reaction center subunit V
           gi|60392971|sp|P69388.2|PSBE_MAIZE RecName:
           Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
           reaction center subunit V
           gi|60392973|sp|P69390.2|PSBE_HORVU RecName:
           Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
           reaction center subunit V
           gi|75291221|sp|Q6L383.3|PSBE_SACHY RecName:
           Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
           reaction center subunit V
           gi|125964877|sp|A1EA25.1|PSBE_AGRST RecName:
           Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
           reaction center subunit V
           gi|125964917|sp|A1E9U1.1|PSBE_SORBI RecName:
           Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
           reaction center subunit V
           gi|148887004|sp|P0C368.1|PSBE_ORYSA RecName:
           Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
           reaction center subunit V
           gi|148887005|sp|P0C369.1|PSBE_ORYSI RecName:
           Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
           reaction center subunit V
           gi|148887006|sp|P0C370.1|PSBE_ORYSJ RecName:
           Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
           reaction center subunit V gi|12004|emb|CAA33965.1| PSII
           cytochrome b559 [Oryza sativa Japonica Group]
           gi|12231|emb|CAA31698.1| psbE [Secale cereale]
           gi|12339|emb|CAA27405.1| unnamed protein product
           [Triticum aestivum] gi|14260|emb|CAA33294.1| cytochrome
           b-559 polypeptide [Triticum aestivum]
           gi|336409|gb|AAA84044.1| cytochrome b-559 9.4 kD
           apoprotein (psbE) [Hordeum vulgare]
           gi|336416|gb|AAA84048.1| cytochrome b-559 9.4 kDa
           protein (psbE) [Hordeum vulgare]
           gi|342586|gb|AAA84478.1| cytochrome b559 alpha subunit
           [Zea mays] gi|902238|emb|CAA60302.1| PSII cytochrome
           b559 [Zea mays] gi|20161433|dbj|BAB90357.1| Chloroplast
           PSII cytochrome b559 (psbE) [Oryza sativa Japonica
           Group] gi|21952823|dbj|BAC06239.1| PSII cytochrome b559
           (psbE) [Oryza sativa Japonica Group]
           gi|40253578|dbj|BAD05524.1| cytochrome b559 alpha chain
           [Oryza sativa Japonica Group] gi|48478689|gb|AAT44709.1|
           cytochrome b559 alpha chain [Saccharum hybrid cultivar
           SP80-3280] gi|49615013|dbj|BAD26796.1| PSII cytochrome
           b559 [Oryza nivara] gi|49659528|dbj|BAD27309.1| PSII
           cytochrome b559 8kD subunit [Saccharum hybrid cultivar
           NCo 310] gi|118201058|gb|ABK79429.1| photosystem II
           cytochrome b559 alpha subunit [Hordeum vulgare subsp.
           vulgare] gi|118201143|gb|ABK79513.1| photosystem II
           cytochrome b559 alpha subunit [Sorghum bicolor]
           gi|118201228|gb|ABK79597.1| photosystem II cytochrome
           b559 alpha subunit [Agrostis stolonifera]
           gi|193075573|gb|ACF08656.1| PSII cytochrome b559 8kDa
           subunit (chloroplast) [Brachypodium distachyon]
           gi|209361373|gb|ACI43288.1| photosystem II cytochrome
           b559 alpha subunit [Coix lacryma-jobi]
           gi|246367083|gb|ACS94694.1| PsbE [Bambusa oldhamii]
           gi|255040276|gb|ACT99936.1| photosystem II cytochrome
           b559 alpha subunit [Dendrocalamus latiflorus]
           gi|307133903|gb|ADN32908.1| photosystem II cytochrome
           b559 alpha subunit [Phyllostachys nigra var. henonis]
           gi|307697261|gb|ADN86085.1| photosystem II cytochrome
           b559 alpha subunit [Chasmanthium latifolium]
           gi|309321634|gb|ADO65159.1| photosystem II cytochrome
           b559 alpha subunit [Acidosasa purpurea]
           gi|309321718|gb|ADO65242.1| photosystem II cytochrome
           b559 alpha subunit [Ferrocalamus rimosivaginus]
           gi|309321801|gb|ADO65324.1| photosystem II cytochrome
           b559 alpha subunit [Indocalamus longiauritus]
           gi|309321885|gb|ADO65407.1| photosystem II cytochrome
           b559 alpha subunit [Phyllostachys edulis]
           gi|309321970|gb|ADO65491.1| photosystem II cytochrome
           b559 alpha subunit [Bambusa emeiensis]
           gi|319412335|gb|ADV41871.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Panicum virgatum]
           gi|319412422|gb|ADV41957.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Panicum virgatum]
           gi|336326855|gb|AEI53033.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Oryza meridionalis]
           gi|336326931|gb|AEI53108.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Oryza rufipogon]
           gi|336327009|gb|AEI53185.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Oryza rufipogon]
           gi|346228320|gb|AEO21194.1| photosystem II cytochrome
           b559 alpha subunit [Leersia tisserantii]
           gi|346228404|gb|AEO21277.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Phyllostachys
           propinqua] gi|346228488|gb|AEO21360.1| photosystem II
           cytochrome b559 alpha subunit [Rhynchoryza subulata]
           gi|353685070|gb|AER12835.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Oryza sativa Indica
           Group] gi|353685158|gb|AER12922.1| photosystem II
           cytochrome b559 alpha subunit (chloroplast) [Oryza
           sativa Indica Group] gi|374974885|gb|AFA27534.1|
           photosystem II cytochrome b559 alpha subunit
           [Thamnochortus insignis] gi|384406868|gb|AFH89525.1|
           photosystem II cytochrome b559 alpha subunit
           (chloroplast) [Aegilops tauschii]
           gi|394986508|gb|AFN42389.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Aegilops speltoides]
           gi|410177782|gb|AFV62663.1| photosystem II cytochrome
           b559 alpha subunit [Festuca altissima]
           gi|410177869|gb|AFV62749.1| photosystem II cytochrome
           b559 alpha subunit [Festuca ovina]
           gi|413917709|gb|AFW57641.1| cytochrome b559 subunit
           alpha [Zea mays] gi|414590288|tpg|DAA40859.1| TPA:
           cytochrome b559 subunit alpha [Zea mays]
           gi|414879661|tpg|DAA56792.1| TPA: cytochrome b559
           subunit alpha [Zea mays] gi|441480267|gb|AGC38179.1|
           photosystem II protein V (chloroplast) [Arundinaria
           gigantea] gi|473722901|gb|EMS44978.1| Cytochrome b559
           subunit alpha [Triticum urartu]
           gi|474005446|gb|EMS52410.1| Cytochrome b559 subunit
           alpha [Triticum urartu] gi|521300968|gb|AGP50771.1|
           photosystem II cytochrome b559 alpha subunit
           (chloroplast) [Hordeum vulgare subsp. vulgare]
           gi|521301046|gb|AGP50848.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Hordeum vulgare subsp.
           spontaneum] gi|521301126|gb|AGP50927.1| photosystem II
           cytochrome b559 alpha subunit (chloroplast) [Hordeum
           vulgare subsp. spontaneum] gi|521301206|gb|AGP51006.1|
           photosystem II cytochrome b559 alpha subunit
           (chloroplast) [Triticum monococcum]
           gi|521301286|gb|AGP51085.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Secale cereale]
           gi|521301363|gb|AGP51161.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Triticum monococcum
           subsp. aegilopoides] gi|521301503|gb|AGP51299.1|
           photosystem II cytochrome b559 alpha subunit
           (chloroplast) [Triticum aestivum]
           gi|554515570|gb|AGY92873.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Aegilops cylindrica]
           gi|554515648|gb|AGY92950.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Aegilops geniculata]
           gi|555298059|gb|AGZ13161.1| photosystem II cytochrome
           b559 alpha subunit [Setaria italica]
           gi|555946005|gb|AGZ19231.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Oryza rufipogon]
           gi|558614306|gb|AHA82316.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Phragmites australis]
           gi|582041350|gb|AHI43060.1| photosystem II protein V
           [Deschampsia antarctica] gi|225299|prf||1211325A
           cytochrome b559 gi|226625|prf||1603356AY photosystem II
           cytochrome b559 gi|226933|prf||1611459A cytochrome b-559
          Length = 83

 Score =  134 bits (338), Expect = 1e-29
 Identities = 64/64 (100%), Positives = 64/64 (100%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF
Sbjct: 20  WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 79

Query: 187 SRSF 198
           SRSF
Sbjct: 80  SRSF 83


>gb|EHK62729.1| hypothetical protein M3S_K11, partial [Sorghum bicolor]
          Length = 65

 Score =  134 bits (338), Expect = 1e-29
 Identities = 64/64 (100%), Positives = 64/64 (100%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF
Sbjct: 2   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 61

Query: 187 SRSF 198
           SRSF
Sbjct: 62  SRSF 65


>ref|YP_008757458.1| cytochrome b559 subunit alpha (chloroplast) [Oryza rufipogon]
           gi|42795499|gb|AAS46066.1| cytochrome b559 alpha chain
           [Oryza sativa Indica Group] gi|42795566|gb|AAS46132.1|
           cytochrome b559 alpha chain [Oryza sativa Japonica
           Group] gi|42795630|gb|AAS46195.1| cytochrome b559 alpha
           chain [Oryza sativa Japonica Group]
           gi|290790587|gb|ADD62847.1| photosystem II cytochrome
           b559 alpha subunit [Oryza sativa Japonica Group]
           gi|290790656|gb|ADD62915.1| photosystem II cytochrome
           b559 alpha subunit [Oryza meridionalis]
           gi|290790725|gb|ADD62983.1| photosystem II cytochrome
           b559 alpha subunit [Oryza australiensis]
           gi|290790794|gb|ADD63051.1| photosystem II cytochrome
           b559 alpha subunit [Potamophila parviflora]
           gi|290790861|gb|ADD63117.1| photosystem II cytochrome
           b559 alpha subunit [Microlaena stipoides]
           gi|552954496|gb|AGY48964.1| cytochrome b559 subunit
           alpha (chloroplast) [Oryza rufipogon]
          Length = 104

 Score =  134 bits (338), Expect = 1e-29
 Identities = 64/64 (100%), Positives = 64/64 (100%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF
Sbjct: 41  WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 100

Query: 187 SRSF 198
           SRSF
Sbjct: 101 SRSF 104


>gb|AAN32308.1| cytochrome b-559 alpha subunit, partial (chloroplast) [Stemona
           tuberosa] gi|42539627|gb|AAS18705.1| cytochrome b-559
           alpha subunit [Elegia fenestrata]
           gi|133711707|gb|ABO36222.1| cytochrome b-559 alpha
           subunit protein [Centrolepis monogyna]
           gi|149208906|gb|ABR21944.1| cytochrome b-559 alpha
           subunit [Chasmanthium latifolium]
           gi|149208911|gb|ABR21948.1| cytochrome b-559 alpha
           subunit [Aristida adscensionis]
           gi|149208921|gb|ABR21956.1| cytochrome b-559 alpha
           subunit [Danthonia californica]
           gi|149208926|gb|ABR21960.1| cytochrome b-559 alpha
           subunit [Phragmites australis]
           gi|149208931|gb|ABR21964.1| cytochrome b-559 alpha
           subunit [Brachyelytrum aristosum]
           gi|149208936|gb|ABR21968.1| cytochrome b-559 alpha
           subunit [Pseudosasa japonica]
          Length = 75

 Score =  134 bits (338), Expect = 1e-29
 Identities = 64/64 (100%), Positives = 64/64 (100%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF
Sbjct: 12  WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 71

Query: 187 SRSF 198
           SRSF
Sbjct: 72  SRSF 75


>gb|EMS57323.1| Cytochrome b559 subunit alpha [Triticum urartu]
          Length = 83

 Score =  134 bits (337), Expect = 2e-29
 Identities = 63/64 (98%), Positives = 64/64 (100%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSIT+PSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF
Sbjct: 20  WVIHSITVPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 79

Query: 187 SRSF 198
           SRSF
Sbjct: 80  SRSF 83


>gb|AGC38262.1| photosystem II protein V (chloroplast) [Cryptochloa strictiflora]
          Length = 87

 Score =  134 bits (337), Expect = 2e-29
 Identities = 64/67 (95%), Positives = 66/67 (98%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF
Sbjct: 20  WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 79

Query: 187 SRSF*EA 207
           SRS+ E+
Sbjct: 80  SRSYPES 86


>gb|AFA27506.1| photosystem II cytochrome b559 alpha subunit, partial [Ecdeiocolea
           monostachya]
          Length = 83

 Score =  133 bits (335), Expect = 3e-29
 Identities = 63/64 (98%), Positives = 64/64 (100%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTE+RQGIPLITDRFDSLEQLDEF
Sbjct: 20  WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTENRQGIPLITDRFDSLEQLDEF 79

Query: 187 SRSF 198
           SRSF
Sbjct: 80  SRSF 83


>gb|AAS18725.1| cytochrome b-559 alpha subunit [Xyris jupicai]
          Length = 68

 Score =  133 bits (335), Expect = 3e-29
 Identities = 63/64 (98%), Positives = 64/64 (100%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF
Sbjct: 5   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 64

Query: 187 SRSF 198
           S+SF
Sbjct: 65  SKSF 68


>ref|YP_007475978.1| photosystem II cytochrome b559 alpha subunit [Bismarckia nobilis]
           gi|449326461|gb|AGE93043.1| photosystem II cytochrome
           b559 alpha subunit [Bismarckia nobilis]
          Length = 83

 Score =  133 bits (334), Expect = 4e-29
 Identities = 63/64 (98%), Positives = 64/64 (100%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLD+F
Sbjct: 20  WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDKF 79

Query: 187 SRSF 198
           SRSF
Sbjct: 80  SRSF 83


>ref|YP_001531299.1| psbE gene product (chloroplast) [Lolium perenne]
           gi|255961285|ref|YP_002364515.2| photosystem II
           cytochrome b559 alpha subunit [Festuca arundinacea]
           gi|427437088|ref|YP_007026655.1| photosystem II
           cytochrome b559 alpha subunit [Festuca pratensis]
           gi|427437234|ref|YP_007026741.1| photosystem II
           cytochrome b559 alpha subunit [Lolium multiflorum]
           gi|158934414|emb|CAO85992.1| photosystem II cytochrome
           b559 alpha subunit (chloroplast) [Lolium perenne]
           gi|255926568|gb|ACJ70772.2| photosystem II cytochrome
           b559 alpha subunit [Festuca arundinacea]
           gi|410177956|gb|AFV62835.1| photosystem II cytochrome
           b559 alpha subunit [Festuca pratensis]
           gi|410178043|gb|AFV62921.1| photosystem II cytochrome
           b559 alpha subunit [Lolium multiflorum]
          Length = 83

 Score =  132 bits (333), Expect = 6e-29
 Identities = 63/64 (98%), Positives = 63/64 (98%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTE RQGIPLITDRFDSLEQLDEF
Sbjct: 20  WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTERRQGIPLITDRFDSLEQLDEF 79

Query: 187 SRSF 198
           SRSF
Sbjct: 80  SRSF 83


>gb|AFA27507.1| photosystem II cytochrome b559 alpha subunit, partial [Eleusine
           coracana]
          Length = 83

 Score =  132 bits (332), Expect = 7e-29
 Identities = 63/64 (98%), Positives = 63/64 (98%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDE 
Sbjct: 20  WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEL 79

Query: 187 SRSF 198
           SRSF
Sbjct: 80  SRSF 83


>gb|ABR21952.1| cytochrome b-559 alpha subunit [Bouteloua curtipendula]
          Length = 75

 Score =  132 bits (332), Expect = 7e-29
 Identities = 63/64 (98%), Positives = 63/64 (98%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDE 
Sbjct: 12  WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEL 71

Query: 187 SRSF 198
           SRSF
Sbjct: 72  SRSF 75


>gb|ABO36226.1| cytochrome b-559 alpha subunit protein [Aphelia brizula]
          Length = 75

 Score =  132 bits (332), Expect = 7e-29
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYD+FGSPRPNEYFTESRQGIPLITDRFDSLEQL+EF
Sbjct: 12  WVIHSITIPSLFIAGWLFVSTGLAYDIFGSPRPNEYFTESRQGIPLITDRFDSLEQLNEF 71

Query: 187 SRSF 198
           SRSF
Sbjct: 72  SRSF 75


>gb|ABJ52168.1| PsbE [Phyllostachys edulis]
          Length = 82

 Score =  132 bits (332), Expect = 7e-29
 Identities = 63/63 (100%), Positives = 63/63 (100%)
 Frame = +1

Query: 7   WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 186
           WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF
Sbjct: 20  WVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEF 79

Query: 187 SRS 195
           SRS
Sbjct: 80  SRS 82


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