BLASTX nr result

ID: Stemona21_contig00016982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00016982
         (511 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064104.1| orf110b gene product (mitochondrion) [Beta vulg...    67   5e-14
ref|YP_173477.1| hypothetical protein NitaMp140 [Nicotiana tabac...    75   1e-13
ref|XP_002335984.1| predicted protein [Populus trichocarpa]            63   5e-08

>ref|NP_064104.1| orf110b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435128|ref|YP_004222346.1| hypothetical
           protein BevumaM_p112 [Beta vulgaris subsp. maritima]
           gi|346683219|ref|YP_004842151.1| hypothetical protein
           BemaM_p107 [Beta macrocarpa] gi|9087354|dbj|BAA99498.1|
           orf110b [Beta vulgaris subsp. vulgaris]
           gi|317905682|emb|CBJ14076.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439861|emb|CBJ17566.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148051|emb|CBJ20714.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500137|emb|CBX24956.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939116|emb|CBL51962.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 110

 Score = 67.4 bits (163), Expect(2) = 5e-14
 Identities = 32/38 (84%), Positives = 33/38 (86%)
 Frame = -3

Query: 326 LRSGFEPLTQGFSVLCSNLLSYLNHFHQVSFLHL*APY 213
           LRSGFEPLTQGFSVLCSN LSYLNHF +V FLH  APY
Sbjct: 46  LRSGFEPLTQGFSVLCSNQLSYLNHFPKVCFLHRIAPY 83



 Score = 35.8 bits (81), Expect(2) = 5e-14
 Identities = 16/20 (80%), Positives = 16/20 (80%)
 Frame = -2

Query: 507 PPGTYRSTRSINTRTELAHP 448
           P   YRSTRSI TRTELAHP
Sbjct: 20  PSEAYRSTRSIKTRTELAHP 39


>ref|YP_173477.1| hypothetical protein NitaMp140 [Nicotiana tabacum]
           gi|56806642|dbj|BAD83543.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 116

 Score = 74.7 bits (182), Expect(3) = 1e-13
 Identities = 40/58 (68%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = -3

Query: 383 SLEFLPSSGSLSATPLD-QTLRSGFEPLTQGFSVLCSNLLSYLNHFHQVSFLHL*APY 213
           S  F+  SGSL AT    + LRSGFEPLTQGFSVLCSN LSYLNHF +V FLH  APY
Sbjct: 56  SFTFISKSGSLPATVWTFRLLRSGFEPLTQGFSVLCSNQLSYLNHFPKVCFLHRIAPY 113



 Score = 24.6 bits (52), Expect(3) = 1e-13
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 448 PFGHRDART 422
           PFGHRDART
Sbjct: 10  PFGHRDART 18



 Score = 22.3 bits (46), Expect(3) = 1e-13
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -2

Query: 477 INTRTELAHP 448
           +NT+TELAHP
Sbjct: 1   MNTQTELAHP 10


>ref|XP_002335984.1| predicted protein [Populus trichocarpa]
          Length = 86

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/55 (65%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
 Frame = -3

Query: 386 LSLEFLPSSGS-LSATPLDQTLRSGFEPLTQGFSVLCSNLLSYLNHFHQVSFLHL 225
           LSLEF  S+ S L      + LRSGFEPLTQGFSVLCSNLLSYLNHF +V  L +
Sbjct: 23  LSLEFPNSARSRLRVLMTLRPLRSGFEPLTQGFSVLCSNLLSYLNHFPKVCVLFI 77


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