BLASTX nr result

ID: Stemona21_contig00016944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00016944
         (378 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277631.1| PREDICTED: U5 small nuclear ribonucleoprotei...   244   8e-63
gb|EOY04646.1| Transducin/WD40 repeat-like superfamily protein i...   239   4e-61
gb|EOY04644.1| Transducin/WD40 repeat-like superfamily protein i...   239   4e-61
emb|CBI24698.3| unnamed protein product [Vitis vinifera]              238   6e-61
gb|EXB88315.1| U5 small nuclear ribonucleoprotein 40 kDa protein...   236   2e-60
ref|XP_006492776.1| PREDICTED: U5 small nuclear ribonucleoprotei...   236   2e-60
ref|XP_006442172.1| hypothetical protein CICLE_v10020927mg [Citr...   236   2e-60
ref|XP_004172746.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...   236   3e-60
ref|XP_004135336.1| PREDICTED: U5 small nuclear ribonucleoprotei...   236   3e-60
ref|XP_002326058.1| transducin family protein [Populus trichocar...   234   7e-60
gb|ACE96604.1| U5 snRNP-specific protein-like factor [Populus tr...   234   7e-60
gb|ACE96595.1| U5 snRNP-specific protein-like factor [Populus tr...   234   7e-60
gb|ACE96592.1| U5 snRNP-specific protein-like factor [Populus tr...   234   7e-60
gb|ACE96580.1| U5 snRNP-specific protein-like factor [Populus tr...   234   7e-60
gb|ACE96578.1| U5 snRNP-specific protein-like factor [Populus tr...   234   7e-60
gb|ACE96577.1| U5 snRNP-specific protein-like factor [Populus tr...   234   7e-60
ref|XP_002524865.1| WD-repeat protein, putative [Ricinus communi...   234   9e-60
gb|ACE96588.1| U5 snRNP-specific protein-like factor [Populus tr...   234   9e-60
ref|XP_006858788.1| hypothetical protein AMTR_s00066p00161070 [A...   234   1e-59
gb|ACE96587.1| U5 snRNP-specific protein-like factor [Populus tr...   233   1e-59

>ref|XP_002277631.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
           [Vitis vinifera]
          Length = 344

 Score =  244 bits (623), Expect = 8e-63
 Identities = 115/125 (92%), Positives = 122/125 (97%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           TTDG+QIISASPD+TLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK
Sbjct: 106 TTDGTQIISASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 165

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWD+R RGA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVKVWD+RRNEVTMTLQGH DM
Sbjct: 166 LWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRRNEVTMTLQGHQDM 225

Query: 16  ITGMQ 2
           ITGMQ
Sbjct: 226 ITGMQ 230


>gb|EOY04646.1| Transducin/WD40 repeat-like superfamily protein isoform 3
           [Theobroma cacao]
          Length = 325

 Score =  239 bits (609), Expect = 4e-61
 Identities = 112/124 (90%), Positives = 120/124 (96%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           TTDGSQIISASPD+TLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK
Sbjct: 87  TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 146

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWD+R RGA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVK+WD+R+ EVTMTLQGH DM
Sbjct: 147 LWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKLWDLRKGEVTMTLQGHQDM 206

Query: 16  ITGM 5
           ITGM
Sbjct: 207 ITGM 210


>gb|EOY04644.1| Transducin/WD40 repeat-like superfamily protein isoform 1
           [Theobroma cacao] gi|508712748|gb|EOY04645.1|
           Transducin/WD40 repeat-like superfamily protein isoform
           1 [Theobroma cacao]
          Length = 342

 Score =  239 bits (609), Expect = 4e-61
 Identities = 112/124 (90%), Positives = 120/124 (96%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           TTDGSQIISASPD+TLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK
Sbjct: 104 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 163

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWD+R RGA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVK+WD+R+ EVTMTLQGH DM
Sbjct: 164 LWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKLWDLRKGEVTMTLQGHQDM 223

Query: 16  ITGM 5
           ITGM
Sbjct: 224 ITGM 227


>emb|CBI24698.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  238 bits (607), Expect = 6e-61
 Identities = 112/122 (91%), Positives = 119/122 (97%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           TTDG+QIISASPD+TLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK
Sbjct: 106 TTDGTQIISASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 165

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWD+R RGA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVKVWD+RRNEVTMTLQGH DM
Sbjct: 166 LWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRRNEVTMTLQGHQDM 225

Query: 16  IT 11
           IT
Sbjct: 226 IT 227


>gb|EXB88315.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Morus notabilis]
           gi|587987202|gb|EXC71590.1| U5 small nuclear
           ribonucleoprotein 40 kDa protein [Morus notabilis]
          Length = 345

 Score =  236 bits (602), Expect = 2e-60
 Identities = 110/124 (88%), Positives = 119/124 (95%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           TTDGSQIISASPD+TLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPL+VSGSDDGTAK
Sbjct: 107 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLIVSGSDDGTAK 166

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWD+R RGA+QTFPDKYQITAV FSDA+DKI+TGG+DNDVKVWD+R+ EV MTLQGH DM
Sbjct: 167 LWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVMMTLQGHQDM 226

Query: 16  ITGM 5
           ITGM
Sbjct: 227 ITGM 230


>ref|XP_006492776.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
           [Citrus sinensis]
          Length = 347

 Score =  236 bits (602), Expect = 2e-60
 Identities = 110/124 (88%), Positives = 120/124 (96%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           TTDGSQIISASPD+TLRAWDVETGKQIKKMAEH+SFVNSCCPSRRGPPLVVSGSDDGTAK
Sbjct: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWD+R RGA+QTFPDKYQITAV FSDA+DKI+TGG+DNDVKVWD+R+ EV+MTLQGH DM
Sbjct: 169 LWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228

Query: 16  ITGM 5
           ITGM
Sbjct: 229 ITGM 232


>ref|XP_006442172.1| hypothetical protein CICLE_v10020927mg [Citrus clementina]
           gi|567899370|ref|XP_006442173.1| hypothetical protein
           CICLE_v10020927mg [Citrus clementina]
           gi|567899372|ref|XP_006442174.1| hypothetical protein
           CICLE_v10020927mg [Citrus clementina]
           gi|557544434|gb|ESR55412.1| hypothetical protein
           CICLE_v10020927mg [Citrus clementina]
           gi|557544435|gb|ESR55413.1| hypothetical protein
           CICLE_v10020927mg [Citrus clementina]
           gi|557544436|gb|ESR55414.1| hypothetical protein
           CICLE_v10020927mg [Citrus clementina]
          Length = 347

 Score =  236 bits (602), Expect = 2e-60
 Identities = 110/124 (88%), Positives = 120/124 (96%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           TTDGSQIISASPD+TLRAWDVETGKQIKKMAEH+SFVNSCCPSRRGPPLVVSGSDDGTAK
Sbjct: 109 TTDGSQIISASPDKTLRAWDVETGKQIKKMAEHNSFVNSCCPSRRGPPLVVSGSDDGTAK 168

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWD+R RGA+QTFPDKYQITAV FSDA+DKI+TGG+DNDVKVWD+R+ EV+MTLQGH DM
Sbjct: 169 LWDMRQRGAIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKVWDLRKGEVSMTLQGHQDM 228

Query: 16  ITGM 5
           ITGM
Sbjct: 229 ITGM 232


>ref|XP_004172746.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
           40 kDa protein-like [Cucumis sativus]
          Length = 344

 Score =  236 bits (601), Expect = 3e-60
 Identities = 109/125 (87%), Positives = 119/125 (95%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           T DGSQI+SASPD+TLRAWDVETGKQIKKMAEHSSFVNSCCP+RRGPPL+VSGSDDGTAK
Sbjct: 106 TVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAK 165

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWD+R RGA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVKVWD+R+ EV MTLQGH DM
Sbjct: 166 LWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDM 225

Query: 16  ITGMQ 2
           ITGMQ
Sbjct: 226 ITGMQ 230


>ref|XP_004135336.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
           [Cucumis sativus]
          Length = 344

 Score =  236 bits (601), Expect = 3e-60
 Identities = 109/125 (87%), Positives = 119/125 (95%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           T DGSQI+SASPD+TLRAWDVETGKQIKKMAEHSSFVNSCCP+RRGPPL+VSGSDDGTAK
Sbjct: 106 TVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAK 165

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWD+R RGA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVKVWD+R+ EV MTLQGH DM
Sbjct: 166 LWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDM 225

Query: 16  ITGMQ 2
           ITGMQ
Sbjct: 226 ITGMQ 230


>ref|XP_002326058.1| transducin family protein [Populus trichocarpa]
           gi|222862933|gb|EEF00440.1| transducin family protein
           [Populus trichocarpa]
          Length = 345

 Score =  234 bits (598), Expect = 7e-60
 Identities = 110/125 (88%), Positives = 119/125 (95%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           T DGSQIISASPD+T+RAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGT+K
Sbjct: 107 TADGSQIISASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTSK 166

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWDLR +GA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVKVWDIR+ EVTMTL+GH DM
Sbjct: 167 LWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDIRKGEVTMTLEGHQDM 226

Query: 16  ITGMQ 2
           IT MQ
Sbjct: 227 ITSMQ 231


>gb|ACE96604.1| U5 snRNP-specific protein-like factor [Populus tremula]
          Length = 215

 Score =  234 bits (598), Expect = 7e-60
 Identities = 110/125 (88%), Positives = 119/125 (95%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           T DGSQIISASPD+T+RAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGT+K
Sbjct: 20  TADGSQIISASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTSK 79

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWDLR +GA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVKVWDIR+ EVTMTL+GH DM
Sbjct: 80  LWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDIRKGEVTMTLEGHQDM 139

Query: 16  ITGMQ 2
           IT MQ
Sbjct: 140 ITSMQ 144


>gb|ACE96595.1| U5 snRNP-specific protein-like factor [Populus tremula]
          Length = 215

 Score =  234 bits (598), Expect = 7e-60
 Identities = 110/125 (88%), Positives = 119/125 (95%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           T DGSQIISASPD+T+RAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGT+K
Sbjct: 20  TADGSQIISASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTSK 79

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWDLR +GA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVKVWDIR+ EVTMTL+GH DM
Sbjct: 80  LWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDIRKGEVTMTLEGHQDM 139

Query: 16  ITGMQ 2
           IT MQ
Sbjct: 140 ITSMQ 144


>gb|ACE96592.1| U5 snRNP-specific protein-like factor [Populus tremula]
           gi|190896166|gb|ACE96596.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
          Length = 215

 Score =  234 bits (598), Expect = 7e-60
 Identities = 110/125 (88%), Positives = 119/125 (95%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           T DGSQIISASPD+T+RAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGT+K
Sbjct: 20  TADGSQIISASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTSK 79

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWDLR +GA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVKVWDIR+ EVTMTL+GH DM
Sbjct: 80  LWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDIRKGEVTMTLEGHQDM 139

Query: 16  ITGMQ 2
           IT MQ
Sbjct: 140 ITSMQ 144


>gb|ACE96580.1| U5 snRNP-specific protein-like factor [Populus tremula]
           gi|190896136|gb|ACE96581.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896138|gb|ACE96582.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896140|gb|ACE96583.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896142|gb|ACE96584.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896146|gb|ACE96586.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896154|gb|ACE96590.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896162|gb|ACE96594.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896168|gb|ACE96597.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896170|gb|ACE96598.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896172|gb|ACE96599.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896174|gb|ACE96600.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896176|gb|ACE96601.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896178|gb|ACE96602.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896180|gb|ACE96603.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896184|gb|ACE96605.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896186|gb|ACE96606.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896188|gb|ACE96607.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
           gi|190896190|gb|ACE96608.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
          Length = 215

 Score =  234 bits (598), Expect = 7e-60
 Identities = 110/125 (88%), Positives = 119/125 (95%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           T DGSQIISASPD+T+RAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGT+K
Sbjct: 20  TADGSQIISASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTSK 79

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWDLR +GA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVKVWDIR+ EVTMTL+GH DM
Sbjct: 80  LWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDIRKGEVTMTLEGHQDM 139

Query: 16  ITGMQ 2
           IT MQ
Sbjct: 140 ITSMQ 144


>gb|ACE96578.1| U5 snRNP-specific protein-like factor [Populus tremula]
          Length = 215

 Score =  234 bits (598), Expect = 7e-60
 Identities = 110/125 (88%), Positives = 119/125 (95%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           T DGSQIISASPD+T+RAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGT+K
Sbjct: 20  TADGSQIISASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTSK 79

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWDLR +GA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVKVWDIR+ EVTMTL+GH DM
Sbjct: 80  LWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDIRKGEVTMTLEGHQDM 139

Query: 16  ITGMQ 2
           IT MQ
Sbjct: 140 ITSMQ 144


>gb|ACE96577.1| U5 snRNP-specific protein-like factor [Populus tremula]
           gi|190896132|gb|ACE96579.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
          Length = 215

 Score =  234 bits (598), Expect = 7e-60
 Identities = 110/125 (88%), Positives = 119/125 (95%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           T DGSQIISASPD+T+RAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGT+K
Sbjct: 20  TADGSQIISASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTSK 79

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWDLR +GA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVKVWDIR+ EVTMTL+GH DM
Sbjct: 80  LWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDIRKGEVTMTLEGHQDM 139

Query: 16  ITGMQ 2
           IT MQ
Sbjct: 140 ITSMQ 144


>ref|XP_002524865.1| WD-repeat protein, putative [Ricinus communis]
           gi|223535828|gb|EEF37489.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 345

 Score =  234 bits (597), Expect = 9e-60
 Identities = 108/125 (86%), Positives = 120/125 (96%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           TTDGSQIISASPD+T+RAWD+ETGKQIKKMAEHSSFVNSCCP+RRGPPLVVSGSDDGTAK
Sbjct: 107 TTDGSQIISASPDKTVRAWDIETGKQIKKMAEHSSFVNSCCPTRRGPPLVVSGSDDGTAK 166

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWD+R RGA+QTFPDKYQITAV FSDA+DKIFTGG+DN+VKVWD+R+ EVTM L+GH DM
Sbjct: 167 LWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNEVKVWDLRKGEVTMKLEGHQDM 226

Query: 16  ITGMQ 2
           ITGMQ
Sbjct: 227 ITGMQ 231


>gb|ACE96588.1| U5 snRNP-specific protein-like factor [Populus tremula]
           gi|190896152|gb|ACE96589.1| U5 snRNP-specific
           protein-like factor [Populus tremula]
          Length = 215

 Score =  234 bits (597), Expect = 9e-60
 Identities = 110/125 (88%), Positives = 119/125 (95%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           T DGSQIISASPD+T+RAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGT+K
Sbjct: 20  TADGSQIISASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTSK 79

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWDLR +GA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVKVWDIR+ EVTMTL+GH DM
Sbjct: 80  LWDLRHKGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDIRKGEVTMTLEGHQDM 139

Query: 16  ITGMQ 2
           IT MQ
Sbjct: 140 ITSMQ 144


>ref|XP_006858788.1| hypothetical protein AMTR_s00066p00161070 [Amborella trichopoda]
           gi|548862899|gb|ERN20255.1| hypothetical protein
           AMTR_s00066p00161070 [Amborella trichopoda]
          Length = 345

 Score =  234 bits (596), Expect = 1e-59
 Identities = 108/125 (86%), Positives = 119/125 (95%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           TTDG+QIISASPD+TLRAWDVE GKQ+KKM+EHSSFVN+CCP+RRGPPLVVSGSDDGTAK
Sbjct: 97  TTDGTQIISASPDKTLRAWDVEVGKQVKKMSEHSSFVNACCPARRGPPLVVSGSDDGTAK 156

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWDLR RGAVQTFPDKYQITAV F+DA+DKI+TGG+DNDVKVWD+RR EVTM LQGH DM
Sbjct: 157 LWDLRQRGAVQTFPDKYQITAVSFADASDKIYTGGIDNDVKVWDLRRGEVTMNLQGHSDM 216

Query: 16  ITGMQ 2
           ITGMQ
Sbjct: 217 ITGMQ 221


>gb|ACE96587.1| U5 snRNP-specific protein-like factor [Populus tremula]
          Length = 215

 Score =  233 bits (595), Expect = 1e-59
 Identities = 109/125 (87%), Positives = 119/125 (95%)
 Frame = -3

Query: 376 TTDGSQIISASPDQTLRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAK 197
           T DGSQIISASPD+T+RAWDV+TGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGT+K
Sbjct: 20  TADGSQIISASPDKTVRAWDVDTGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTSK 79

Query: 196 LWDLRLRGAVQTFPDKYQITAVGFSDAADKIFTGGLDNDVKVWDIRRNEVTMTLQGHGDM 17
           LWDLR +GA+QTFPDKYQITAV FSDA+DKIFTGG+DNDVKVWDIR+ EVTMTL+GH DM
Sbjct: 80  LWDLRQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDIRKGEVTMTLEGHQDM 139

Query: 16  ITGMQ 2
           IT MQ
Sbjct: 140 ITSMQ 144


Top