BLASTX nr result

ID: Stemona21_contig00016778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00016778
         (360 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27347.3| unnamed protein product [Vitis vinifera]               71   2e-10
ref|XP_002267976.2| PREDICTED: uncharacterized protein LOC100263...    67   2e-09
emb|CAN68733.1| hypothetical protein VITISV_012100 [Vitis vinifera]    67   2e-09

>emb|CBI27347.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
 Frame = -1

Query: 354 PLPWWAFYGGLLVP--PSHLQNTIQARLQSFTGEEYNRYHQ-EGSGTASDTIS------- 205
           PLPWW FYGG+ +P  P H Q++I+A   +   E +++  Q EGS T S+T S       
Sbjct: 355 PLPWWTFYGGIPIPFLPLHHQDSIKAHEDTKFAETHDKEIQKEGSWTGSNTGSSHQPYLD 414

Query: 204 -MDKSSDAVDSNNSSLSIKLRKN*AFPSRKANADKPMREFVAYKRCAAEKEVCST 43
            M+K SD      S+  +KL +  AF   + N DK ++ F+ YKRC AE++  S+
Sbjct: 415 TMEKESD------SAFELKLSERSAFSRGRTNTDKCVKGFMPYKRCLAERDTQSS 463


>ref|XP_002267976.2| PREDICTED: uncharacterized protein LOC100263252 [Vitis vinifera]
          Length = 495

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 22/126 (17%)
 Frame = -1

Query: 354 PLPWWAFYGGLLVP--PSHLQNTIQARLQSFTGEEYNRYHQ-EGSGTASDTISMDKSSDA 184
           PLPWW FYGG+ +P  P H Q++I+A   +   E +++  Q EGS T S+T S+++  + 
Sbjct: 355 PLPWWTFYGGIPIPFLPLHHQDSIKAHEDTKFAETHDKEIQKEGSWTGSNTGSVNEGGNC 414

Query: 183 VDSN-------------------NSSLSIKLRKN*AFPSRKANADKPMREFVAYKRCAAE 61
            D+N                   +S+  +KL +  AF   + N DK ++ F+ YKRC AE
Sbjct: 415 -DTNWDVETQSHQPYLDTMEKESDSAFELKLSERSAFSRGRTNTDKCVKGFMPYKRCLAE 473

Query: 60  KEVCST 43
           ++  S+
Sbjct: 474 RDTQSS 479


>emb|CAN68733.1| hypothetical protein VITISV_012100 [Vitis vinifera]
          Length = 543

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 22/126 (17%)
 Frame = -1

Query: 354 PLPWWAFYGGLLVP--PSHLQNTIQARLQSFTGEEYNRYHQ-EGSGTASDTISMDKSSDA 184
           PLPWW FYGG+ +P  P H Q++I+A   +   E +++  Q EGS T S+T S+++  + 
Sbjct: 403 PLPWWTFYGGIPIPFLPLHHQDSIKAHEDTKFAETHDKEIQKEGSWTGSNTGSVNEGGNC 462

Query: 183 VDSN-------------------NSSLSIKLRKN*AFPSRKANADKPMREFVAYKRCAAE 61
            D+N                   +S+  +KL +  AF   + N DK ++ F+ YKRC AE
Sbjct: 463 -DTNWDVETQSHQPYLDTMEKESDSAFELKLSERSAFSRGRTNTDKCVKGFMPYKRCLAE 521

Query: 60  KEVCST 43
           ++  S+
Sbjct: 522 RDTQSS 527


Top