BLASTX nr result
ID: Stemona21_contig00016704
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00016704
(3653 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 1011 0.0
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici... 1008 0.0
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 1001 0.0
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 992 0.0
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 987 0.0
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 987 0.0
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 987 0.0
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 964 0.0
gb|EAY94464.1| hypothetical protein OsI_16234 [Oryza sativa Indi... 957 0.0
sp|Q7XM31.1|RDR2_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 953 0.0
dbj|BAJ85295.1| predicted protein [Hordeum vulgare subsp. vulgare] 936 0.0
ref|XP_003579930.1| PREDICTED: probable RNA-dependent RNA polyme... 932 0.0
ref|XP_003560510.1| PREDICTED: probable RNA-dependent RNA polyme... 931 0.0
gb|EMT07612.1| hypothetical protein F775_11614 [Aegilops tauschii] 927 0.0
ref|XP_006653498.1| PREDICTED: probable RNA-dependent RNA polyme... 925 0.0
ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutr... 924 0.0
ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis ... 920 0.0
ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis tha... 924 0.0
gb|EMS53588.1| putative RNA-dependent RNA polymerase 2 [Triticum... 938 0.0
gb|EMT21060.1| hypothetical protein F775_12206 [Aegilops tauschii] 928 0.0
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus]
Length = 1117
Score = 1011 bits (2615), Expect(2) = 0.0
Identities = 491/753 (65%), Positives = 604/753 (80%), Gaps = 2/753 (0%)
Frame = +3
Query: 876 SKKTLSNKSTQAGKLMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEE 1055
S+K LSN +M+C+RVLVTPSR+Y GPELETSNYVVK FS AS+F+RV+FVEE
Sbjct: 362 SQKRLSNN------VMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEE 415
Query: 1056 DWGKLSSDTLSTIVEHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNS 1235
DW KL + ++T ++ G+ SKPYRT+IY R+ T+LRDGI IG+K+FEFLAFSASQLRSNS
Sbjct: 416 DWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNS 475
Query: 1236 FWMFASTGSETAESIRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVE 1415
WMFAS+ + AE IR WMG F KI S+SKCAAR+GQLFSSS+QT +P+RDV++I D+E
Sbjct: 476 VWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIE 535
Query: 1416 VITDGVKYCFSDGIGKISLAFARQVAQKCGLNTTPSAFQIRYGGYKGVVAVDRTSFRKLS 1595
V TDG+ YCFSDGIGKISL+FARQVA KCG+N PSAFQIRYGGYKGV+AVDR SFRKLS
Sbjct: 536 VNTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLS 595
Query: 1596 LRASMRKFDSDVTMLNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEM 1775
LR SM KF+S MLNVTK +S+PCYLNREI +LLSTLG+KDE FE++ +Q+ L M
Sbjct: 596 LRDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRM 655
Query: 1776 LTNRGIALSELNRMTGAEIRTA-VKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRI 1952
LT++ +AL+ L GA+ V+ML +GYEPN+EP+LSM+L+AH SD+RSRCRI
Sbjct: 656 LTDKDVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRI 715
Query: 1953 FVPKGRVLLGCLDETGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTK 2132
FVPKGR+LLGCLDETGILNYGQVY +TLT+ EL+ +++ +F D+T + TK
Sbjct: 716 FVPKGRILLGCLDETGILNYGQVYACITLTKSELQSRNQNYFHTIDETKSILLGKVVVTK 775
Query: 2133 NPCLHPGDIRVLHAVYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDEN 2312
NPCLHPGD+RVL A++ ++L++ GLVDC++FPQKG RPH NECSGGDLDGDLYF+ WDEN
Sbjct: 776 NPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDEN 835
Query: 2313 LIPLETDTPMDYVPRRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKA 2492
LIP +T+ PMDY RRPR+ DH+V LEEIQKFF+DYMIND LGAIS AHLV+ADREP KA
Sbjct: 836 LIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKA 895
Query: 2493 RSPQCLQLAKLHSMAVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRA 2672
S +CL+LA LHSMAVDFAKTGAPAEMPR L+PRE+PDFMER+D+PMYIS+ VLGKLYRA
Sbjct: 896 LSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRA 955
Query: 2673 TVDETEKENPTATESGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAE 2852
V E+E S +R+IYDYDLEV+GFEAFL AE +++ Y +++S LMNYYGAE
Sbjct: 956 AVKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAE 1015
Query: 2853 HEDEILTGNLRNKSIYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCYEVELPKMAS 3032
+EDEIL G+LR+++ YLQRD KYG+MKDRIL++V++L+KEV WF++SC + MAS
Sbjct: 1016 YEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMAS 1075
Query: 3033 AWYHVTYHPNYYSTTNF-LSFPWIVCDVLLNIK 3128
AWYHVTYHP+Y+ F SFPW V DVLLNIK
Sbjct: 1076 AWYHVTYHPSYFKEDMFYFSFPWAVSDVLLNIK 1108
Score = 214 bits (544), Expect(2) = 0.0
Identities = 107/234 (45%), Positives = 155/234 (66%), Gaps = 1/234 (0%)
Frame = +2
Query: 164 MEEVERWESVAAEIMPERKKLEFFVGHDGEQYKLEVNFADVLRSLGCRLSAGGEEGELNA 343
M +E WE V A IMPER+++EF++ H+ E YKLEV F ++L + G L GEE +LNA
Sbjct: 119 MSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCL---GEE-KLNA 174
Query: 344 VLLQLKYAPKIYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCL 523
+LL+LKYAP+IY++ISG + S+F RY +C ED +LWVRT +FS S+G+S C
Sbjct: 175 LLLKLKYAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCW 234
Query: 524 ELAEGLSVSEILTCLP-YSQQLGDLALRKGESLCSSSQLVPIISYPESFTEKYEILFQLN 700
E+ E L S+I +C P Y + D+ L GE CS+S++VP+I YE+ +QLN
Sbjct: 235 EVEEDLQASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLN 294
Query: 701 SVLHMQKISCGQVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQL 862
S++HMQKIS N + D L +L ++TA+ +L++ H+LK CY+P+ F+K QL
Sbjct: 295 SLVHMQKISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQL 348
>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 983
Score = 1008 bits (2606), Expect(2) = 0.0
Identities = 489/756 (64%), Positives = 607/756 (80%), Gaps = 4/756 (0%)
Frame = +3
Query: 891 SNKSTQAGKLMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGKL 1070
S+K+ +MSCHR L+TPS++Y GPELE+SNYVVK F+ AS+F+RV+FVEEDW KL
Sbjct: 211 SSKNLVNHNIMSCHRALITPSKIYCLGPELESSNYVVKNFASYASDFMRVTFVEEDWSKL 270
Query: 1071 SSDTLSTIVEHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMFA 1250
++ +S ++ G+F+KP+RT IY R+ +ILRDGI IG+KKFEFLAFSASQLRSNS WMFA
Sbjct: 271 PANAISMSIQRGIFAKPFRTGIYHRILSILRDGIVIGAKKFEFLAFSASQLRSNSVWMFA 330
Query: 1251 STGSETAESIRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITDG 1430
S + AE IR WMG FNKI S+SKCAAR+GQLFSSS QTF + +D+++I D+EV +DG
Sbjct: 331 SNDKKKAEEIREWMGCFNKIHSISKCAARMGQLFSSSKQTFIVSPQDMEIIPDIEVTSDG 390
Query: 1431 VKYCFSDGIGKISLAFARQVAQKCGLNTTPSAFQIRYGGYKGVVAVDRTSFRKLSLRASM 1610
+ YCFSDGIGKISL+FARQVAQKCGLN TPSAFQIRYGGYKGV+AVDR SFRKLSLR SM
Sbjct: 391 INYCFSDGIGKISLSFARQVAQKCGLNRTPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 450
Query: 1611 RKFDSDVTMLNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLTNRG 1790
KF+S+ MLNVTK SES+PCYLNREII+LL+TLG+KDEIFE + Q++ L+ MLTNR
Sbjct: 451 CKFESENRMLNVTKWSESMPCYLNREIITLLTTLGVKDEIFEGLQQQQLQLLNRMLTNRE 510
Query: 1791 IALSELNRMTGAEIRTA-VKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVPKG 1967
AL+ L + A + +KML+ GYEPN+EP+LSM+L+A+ E L ++RSRCRIFVPKG
Sbjct: 511 SALNVLENLAWANCKNILIKMLVQGYEPNVEPYLSMMLQAYHENLLVELRSRCRIFVPKG 570
Query: 1968 RVLLGCLDETGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKNPCLH 2147
R+L+GCLDET IL+YGQVY+R+T+T+ EL+D D+ F D+TTA TKNPCLH
Sbjct: 571 RILIGCLDETRILDYGQVYVRITMTKAELQDADQASFHRVDETTAVVTGKVIVTKNPCLH 630
Query: 2148 PGDIRVLHAVYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPLE 2327
PGDIRVL AVYE++L++ GLVDC++FPQKGERPHPNECSGGDLDGD +F+ WD+ LIP E
Sbjct: 631 PGDIRVLEAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDGDQFFISWDKGLIPGE 690
Query: 2328 TDTPMDYVPRRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKARSPQC 2507
T++PMDY RRPR DH+V LEEIQKFF+DYMIND LGAIS AHLV+ADREP KARS +C
Sbjct: 691 TESPMDYQGRRPRKMDHDVTLEEIQKFFIDYMINDTLGAISTAHLVHADREPDKARSSKC 750
Query: 2508 LQLAKLHSMAVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRATVDET 2687
LQLA+LHSMAVDFAKTGAPAEMP+ L+P+E+PDFMER D+ MYIS GVLGKLYR T+D T
Sbjct: 751 LQLAELHSMAVDFAKTGAPAEMPKALKPKEFPDFMERIDKKMYISGGVLGKLYRGTLDST 810
Query: 2688 EKENPTATESGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEHEDEI 2867
++ + ++ + YD+DLEV+GFE F+ A +D Y ++LS LM+YY A+ EDEI
Sbjct: 811 RQQRSKFVWTENIAEATYDHDLEVKGFEEFVEIAISHKDMYVEKLSGLMDYYEAKKEDEI 870
Query: 2868 LTGNLRNKSIYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCYEVELPKMASAWYHV 3047
LTGNL+NK++YLQRD +YG+ KDRILI+V+SLQKE WF+ C E ++ASAWYHV
Sbjct: 871 LTGNLQNKAMYLQRDNRRYGDTKDRILISVKSLQKEAKEWFESCCQAKEKQRLASAWYHV 930
Query: 3048 TYHPNYYST-TNFLSFPWIVCDVLLNIK--DSRKLK 3146
TYHP+Y+ LSFPWIV D+LLNIK +S+ LK
Sbjct: 931 TYHPSYFQEGITCLSFPWIVADILLNIKSANSKNLK 966
Score = 194 bits (492), Expect(2) = 0.0
Identities = 97/201 (48%), Positives = 136/201 (67%), Gaps = 1/201 (0%)
Frame = +2
Query: 263 LEVNFADVLRSLGCRLSAGGEEGELNAVLLQLKYAPKIYRRISGPTLNSKFRVDRYHICR 442
+E++F DVL ++GCRL GG+ LNA+LL+LKY +IY++ISGP + SKF DRYH+C+
Sbjct: 1 MEISFEDVLETVGCRL--GGDT--LNAILLKLKYGARIYKKISGPDIASKFSADRYHMCK 56
Query: 443 EDLRFLWVRTVDFSTSCSIGKSCYLCLELAEGLSVSEILTCLP-YSQQLGDLALRKGESL 619
ED F+WVRT DFS+ S+G+S C E+ EGL S+I P Y++ ++ L GE
Sbjct: 57 EDFDFIWVRTTDFSSVKSVGQSTSFCWEIEEGLEASDIFKSFPYYTEAREEVILEDGEEW 116
Query: 620 CSSSQLVPIISYPESFTEKYEILFQLNSVLHMQKISCGQVNTEFFDILNSLSVETAMKLL 799
S+S++VP++ YEILFQLNS++H QKIS V+T L SL+++TA +L
Sbjct: 117 GSASEIVPLVKCGSDSKLPYEILFQLNSLVHTQKISLAAVDTNLITTLGSLTIDTATMIL 176
Query: 800 RKFHKLKTTCYEPVRFIKNQL 862
+K HKL TCY+P+ FIK QL
Sbjct: 177 QKLHKLAVTCYDPLAFIKKQL 197
>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
Length = 1131
Score = 1001 bits (2589), Expect(2) = 0.0
Identities = 489/754 (64%), Positives = 598/754 (79%), Gaps = 4/754 (0%)
Frame = +3
Query: 891 SNKSTQAGKLMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGKL 1070
S+K +MSC+R LVTP ++Y GPELETSNYVVK F++ AS+F+RV+FVEEDW KL
Sbjct: 377 SHKRLIDHNVMSCYRALVTPMKIYCLGPELETSNYVVKNFAKYASDFMRVTFVEEDWSKL 436
Query: 1071 SSDTLSTIVEHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMFA 1250
++ LST ++ G+F+KPYRT IY R+ TIL+DGI IG K +EFLAFSASQLR+NS WMFA
Sbjct: 437 PANALSTSIQRGIFAKPYRTKIYSRILTILQDGIVIGDKHYEFLAFSASQLRNNSVWMFA 496
Query: 1251 STGSETAESIRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITDG 1430
S +AE +R WMG FNKI SVSKCAAR+GQLFSSS QT +P +DV++I DVEV +DG
Sbjct: 497 SNDEVSAEDVREWMGCFNKIHSVSKCAARMGQLFSSSKQTLVVPVQDVEMIPDVEVTSDG 556
Query: 1431 VKYCFSDGIGKISLAFARQVAQKCGLNTTPSAFQIRYGGYKGVVAVDRTSFRKLSLRASM 1610
YCFSDGIGKISL+FARQVAQKCGL+ TPSAFQIRYGGYKGV+AVDR SFRKLSLR SM
Sbjct: 557 NTYCFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRRSM 616
Query: 1611 RKFDSDVTMLNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLTNRG 1790
KF+S MLNVTK SES+PC+LNREIISLLSTLG+KD++FE+M Q+ L +ML NR
Sbjct: 617 LKFESRNRMLNVTKWSESMPCFLNREIISLLSTLGVKDDVFEAMQQQQLILLGKMLINRE 676
Query: 1791 IALSELNRMTGAEIRTA-VKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVPKG 1967
AL L ++ G + + VKML+ GYEPN+EP+LSM+L +H E QLSD++SRCRI+VPKG
Sbjct: 677 AALDVLQKLNGVDSKNILVKMLLQGYEPNVEPYLSMMLLSHHENQLSDLKSRCRIYVPKG 736
Query: 1968 RVLLGCLDETGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKNPCLH 2147
R+L+GC DETGILNYGQV++RVT+T EEL+ KD++FF D T+ TKNPCLH
Sbjct: 737 RLLIGCFDETGILNYGQVFVRVTMTREELESKDQSFFHRVDDKTSIVKGKVLVTKNPCLH 796
Query: 2148 PGDIRVLHAVYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPLE 2327
PGD+RVL AVYE++L++ VDC++FPQKGERPHPNECSGGDLDGD++F+ WD +LIP E
Sbjct: 797 PGDVRVLEAVYEMKLEEKDYVDCIIFPQKGERPHPNECSGGDLDGDIFFISWDNDLIPCE 856
Query: 2328 TDTPMDYVPRRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKARSPQC 2507
T+ PMDY RR R+ DH+V LEEI KFF+DYMIND LGAIS AHLV+ADR+P KARS +C
Sbjct: 857 TEPPMDYTGRRSRIMDHDVTLEEIHKFFVDYMINDTLGAISTAHLVHADRDPDKARSSKC 916
Query: 2508 LQLAKLHSMAVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRATVDET 2687
L LA LHSMAVDFAKTGAPAEMP L+P+E+PDFMER D+P YIS GVLGKLYRAT+D
Sbjct: 917 LHLATLHSMAVDFAKTGAPAEMPLALKPKEFPDFMEREDKPRYISFGVLGKLYRATLDSI 976
Query: 2688 EKENPTATESGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEHEDEI 2867
+ A S ++ + YD+DLEV+GFEAFLG AE ++ Y + +++LMNYYGA EDEI
Sbjct: 977 MQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAESHKEMYEEEMNALMNYYGASTEDEI 1036
Query: 2868 LTGNLRNKSIYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCYEVELPKMASAWYHV 3047
LTGNLRN++ YLQRD +YG+MKDRIL++ ++LQ E WF SC E E P++ASAWYHV
Sbjct: 1037 LTGNLRNRASYLQRDNRRYGDMKDRILLSAKNLQNEAKEWFGSSCKENEHPQLASAWYHV 1096
Query: 3048 TYHPNY-YSTTNFLSFPWIVCDVLLNIK--DSRK 3140
TY P+Y LSFPWIV D+LLNIK +SRK
Sbjct: 1097 TYSPSYCKERMALLSFPWIVGDILLNIKSVNSRK 1130
Score = 204 bits (520), Expect(2) = 0.0
Identities = 113/292 (38%), Positives = 162/292 (55%), Gaps = 18/292 (6%)
Frame = +2
Query: 41 FLRTRLDIRPATDDIAPRATDPRXXXXXXXXXXXXXXXXXEMEEVERWESVAAEIMPERK 220
F L I DI PR + + ++ +E V ++P+R+
Sbjct: 75 FNSQNLKISETHSDIVPRPVKAQHRVEDGVLHVGVMCKEERLRVLQTFEGVRGWLLPDRR 134
Query: 221 KLEFFVG--HDGEQ---------------YKLEVNFADVLRSLGCRLSAGGEEGELNAVL 349
+LEF+V H+GE +K+E+ F DVL ++G L G +N +L
Sbjct: 135 RLEFWVWPKHNGEWQKGIQECQSDSSDCCFKVEILFEDVLETVGFSLDEGAT---VNGIL 191
Query: 350 LQLKYAPKIYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLEL 529
+LKY PKIY+++SGP + SKF DRYHIC+ED F WVRT DFS + SIG S E+
Sbjct: 192 FKLKYGPKIYQKVSGPHVASKFPSDRYHICKEDFDFFWVRTTDFSVTKSIGCSTSFFWEI 251
Query: 530 AEGLSVSEILTCLP-YSQQLGDLALRKGESLCSSSQLVPIISYPESFTEKYEILFQLNSV 706
GL S+I P Y + DL L +GE C++S++VP++ F +E+LFQLNS+
Sbjct: 252 KNGLLASDISNIFPFYKEDKTDLILEEGEEFCTTSEIVPLVKCRPGFNLSHEVLFQLNSL 311
Query: 707 LHMQKISCGQVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQL 862
+H QK+S + E ILN LS+ETA+ +L+K HKLK+ CY+PV F+K QL
Sbjct: 312 VHNQKVSLVAADAELIQILNGLSMETALMVLQKLHKLKSICYDPVSFVKTQL 363
>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
gi|222868578|gb|EEF05709.1| hypothetical protein
POPTR_0015s08500g [Populus trichocarpa]
Length = 1110
Score = 992 bits (2564), Expect(2) = 0.0
Identities = 478/746 (64%), Positives = 597/746 (80%), Gaps = 2/746 (0%)
Frame = +3
Query: 897 KSTQAGKLMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGKLSS 1076
KS +MSCHR L+TPS+++ GPE ETSNYVVK+F++ AS+F+RV+FVEEDW KL +
Sbjct: 358 KSLTENNIMSCHRALITPSKIFCLGPEYETSNYVVKHFAQYASDFIRVTFVEEDWSKLPA 417
Query: 1077 DTLSTIVEHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMFAST 1256
+ +ST ++ G+F+KP+RT IY R+ +ILRDG IG+K+FEFLAFSASQLRSNS WMFAS
Sbjct: 418 NAISTSIQRGIFAKPFRTGIYHRILSILRDGFVIGAKRFEFLAFSASQLRSNSVWMFASN 477
Query: 1257 GSETAESIRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITDGVK 1436
AE IR WMG F+KI SVSKCAAR+GQLFSSS QTF +P +DV++I D+EV TDG+
Sbjct: 478 NGVKAEDIRKWMGCFDKIRSVSKCAARMGQLFSSSLQTFVVPVQDVEIIPDIEVTTDGID 537
Query: 1437 YCFSDGIGKISLAFARQVAQKCGLNTTPSAFQIRYGGYKGVVAVDRTSFRKLSLRASMRK 1616
YCFSDGIGKISL+FA+QVA KCGL+ TPSAFQIRYGGYKGVVAVDR SFRKLSLR+SM K
Sbjct: 538 YCFSDGIGKISLSFAKQVAHKCGLSHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLK 597
Query: 1617 FDSDVTMLNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLTNRGIA 1796
FDS+ MLNVTK SES+PCYLNREIISLLSTLG+ DEIF+++ Q+ RL +MLTN+ A
Sbjct: 598 FDSENRMLNVTKWSESMPCYLNREIISLLSTLGVADEIFQALQQKQLYRLRKMLTNKESA 657
Query: 1797 LSELNRMTGAEIRTA-VKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVPKGRV 1973
L L + A+ + V+ML+ GYEPN+EP+LSM+L+A+ E L ++RSRCRIFVPKGR+
Sbjct: 658 LDVLENLAWADSKNILVQMLLQGYEPNVEPYLSMMLQAYHENSLMELRSRCRIFVPKGRI 717
Query: 1974 LLGCLDETGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKNPCLHPG 2153
L+GCLDE+GIL+YGQVY+R+T+T+ EL+ D++FF+ D++T+ TKNPCLHPG
Sbjct: 718 LIGCLDESGILDYGQVYVRITMTKAELQCCDQSFFRKVDESTSTIIGEVAVTKNPCLHPG 777
Query: 2154 DIRVLHAVYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPLETD 2333
DIRVL AVY+++L++ GLVDC++FPQ G RPHPNECSGGDLDGD +F+ WDE L+P T+
Sbjct: 778 DIRVLEAVYDVELEEKGLVDCIIFPQNGGRPHPNECSGGDLDGDQFFISWDEGLLPCHTE 837
Query: 2334 TPMDYVPRRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKARSPQCLQ 2513
PMDYV R R+ DH V LEEIQ+FF+DYMIND LGAIS AHLV+AD EP KARS +CLQ
Sbjct: 838 APMDYVGGRQRIMDHNVTLEEIQRFFVDYMINDTLGAISTAHLVHADCEPDKARSEKCLQ 897
Query: 2514 LAKLHSMAVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRATVDETEK 2693
LA LHSMAVDFAKTGAPAEMP L+PRE+PDFMER ++ MYIS GVLGKLYR D T +
Sbjct: 898 LATLHSMAVDFAKTGAPAEMPLYLKPREFPDFMERAEKQMYISDGVLGKLYRDIHDSTRQ 957
Query: 2694 ENPTATESGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEHEDEILT 2873
E S ++ + YD DLEV+GFE FLG A ++++Y +++S+LM+YYGA+ EDEILT
Sbjct: 958 ERSNFMWSKKIAEATYDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYGAKTEDEILT 1017
Query: 2874 GNLRNKSIYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCYEVELPKMASAWYHVTY 3053
GNLR++ YLQRD KYG++KDRIL+++++L+KE WF+ SC E MASAWYHVTY
Sbjct: 1018 GNLRHRPTYLQRDNRKYGDVKDRILVSLKNLKKEAKEWFESSCNPTEHQCMASAWYHVTY 1077
Query: 3054 HPNYY-STTNFLSFPWIVCDVLLNIK 3128
HP Y+ N LSFPWIV D+LLNIK
Sbjct: 1078 HPTYFHERMNCLSFPWIVGDILLNIK 1103
Score = 200 bits (509), Expect(2) = 0.0
Identities = 112/271 (41%), Positives = 158/271 (58%), Gaps = 2/271 (0%)
Frame = +2
Query: 56 LDIRPATDDIAPRATDPRXXXXXXXXXXXXXXXXXEMEEVERWESVAAEIMPERKKLEFF 235
L + DDI PR + + +E WE V MPER+++EF+
Sbjct: 84 LKLSETYDDIIPRPVKDQNRMENGVLYVGFMKKETTLCVLEYWEGVRGWFMPERRRIEFW 143
Query: 236 VGHDGE-QYKLEVNFADVLRSLGCRLSAGGEEGELNAVLLQLKYAPKIYRRISGPTLNSK 412
+ E +YKL V F D+L ++G L ++NAV+L+L+Y P+IY++ISGP + SK
Sbjct: 144 IRVGQEFRYKLVVEFEDILEAVGYPLDGD----KVNAVVLKLRYGPRIYQKISGPGIASK 199
Query: 413 FRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLELAEGLSVSEILTCLPYSQQ-LG 589
F +RY C+ED FLWVRT D S SIG+S C E+ EGL S+ PY Q+ +
Sbjct: 200 FSTNRYFYCKEDFDFLWVRTTDISAIKSIGQSTSFCWEIGEGLEASDTFRNFPYYQEDMN 259
Query: 590 DLALRKGESLCSSSQLVPIISYPESFTEKYEILFQLNSVLHMQKISCGQVNTEFFDILNS 769
L L GE CS+S+ VP+I S YE+LFQLNS++H QKIS V+++ IL +
Sbjct: 260 RLDLEDGEEFCSASETVPLIRC-GSDKLAYEVLFQLNSLVHTQKISLAAVDSDLIKILRN 318
Query: 770 LSVETAMKLLRKFHKLKTTCYEPVRFIKNQL 862
L+V TA+ +L+K HKLK TCY+P+ F+K L
Sbjct: 319 LTVNTAIIILQKLHKLKMTCYDPLSFVKQSL 349
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 987 bits (2552), Expect(2) = 0.0
Identities = 476/745 (63%), Positives = 586/745 (78%), Gaps = 2/745 (0%)
Frame = +3
Query: 918 LMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGKLSSDTLSTIV 1097
+MS HRVLVTPS++Y GPELETSNY+VK F+E AS+FLRV+FVEEDWGKL + +S V
Sbjct: 372 MMSVHRVLVTPSKIYCLGPELETSNYIVKNFAEHASDFLRVTFVEEDWGKLFPNAVSMSV 431
Query: 1098 EHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMFASTGSETAES 1277
E G+F+KPYRT IY R+ +ILR+GI IG+K+F FLAFSASQLRSNS WMFAS AE
Sbjct: 432 EQGIFAKPYRTKIYHRILSILREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAED 491
Query: 1278 IRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITDGVKYCFSDGI 1457
IR WMG FNKI S+SKCAAR+GQLFS+S QT E+ + V+++ D+EV +DGV YCFSDGI
Sbjct: 492 IREWMGCFNKIRSISKCAARMGQLFSTSVQTMEVQLQHVEILPDIEVTSDGVSYCFSDGI 551
Query: 1458 GKISLAFARQVAQKCGLNTTPSAFQIRYGGYKGVVAVDRTSFRKLSLRASMRKFDSDVTM 1637
GKIS AFARQVAQKCGLN TPSAFQIRYGGYKGV+AVDR SFRKLSLR SM KF+S M
Sbjct: 552 GKISQAFARQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRM 611
Query: 1638 LNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLTNRGIALSELNRM 1817
LN+TK S+++PCYLNREI+ LLSTLG++D+ E +L + +R L +MLT AL L M
Sbjct: 612 LNITKWSDAMPCYLNREIVILLSTLGVEDKALEDLLDNHLRLLGKMLTTNEAALDVLESM 671
Query: 1818 TGAEIRTAV-KMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVPKGRVLLGCLDE 1994
G +++ + +ML+ GY PN EP+LSM+L++H E Q+SD+RSRCRIF+PKGR+L+GCLDE
Sbjct: 672 GGGDVKKILMRMLLQGYAPNREPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGCLDE 731
Query: 1995 TGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKNPCLHPGDIRVLHA 2174
TGIL YG+VY+R+T+T+ EL++ + FF+ D+TTA TKNPCLHPGD+RVL A
Sbjct: 732 TGILKYGEVYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEA 791
Query: 2175 VYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPLETDTPMDYVP 2354
VYE+ L++ VDC++FPQ GERPHPNECSGGDLDGDLYF+CWDE+LIP +T TPMDY
Sbjct: 792 VYEVTLEEKTWVDCIIFPQNGERPHPNECSGGDLDGDLYFICWDESLIPHQTVTPMDYTG 851
Query: 2355 RRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKARSPQCLQLAKLHSM 2534
RRPR+ DHEV LEEIQ+FF+DYMI+D LGAIS AHLV+ADREP KA + +CLQLA LHSM
Sbjct: 852 RRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNSKCLQLATLHSM 911
Query: 2535 AVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRATVDETEKENPTATE 2714
AVDFAKTGA AEMPR L+PRE+PDFMERWD+PMYIS GVLGKLYR + + N
Sbjct: 912 AVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGVIKSYIRRNSDDLS 971
Query: 2715 SGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEHEDEILTGNLRNKS 2894
+ + YD+DL VEG+EAF+ A+ ++ Y D ++SL+NYYGAE E EILTGNLR KS
Sbjct: 972 TDRAIQDAYDHDLLVEGYEAFIETAKTHKEMYLDSMNSLLNYYGAEKEVEILTGNLRQKS 1031
Query: 2895 IYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCYEVELPKMASAWYHVTYHPNY-YS 3071
+YLQRD +Y E+KDRIL++ +SL KEV GWF C E + K+ SAWYHVTYHP+Y +
Sbjct: 1032 VYLQRDNRRYFELKDRILVSAKSLHKEVKGWFSGCCTEDDHQKLVSAWYHVTYHPSYCHE 1091
Query: 3072 TTNFLSFPWIVCDVLLNIKDSRKLK 3146
+ N L FPW+V D+LLNIK K
Sbjct: 1092 SANCLGFPWVVGDILLNIKSHNTRK 1116
Score = 228 bits (580), Expect(2) = 0.0
Identities = 125/287 (43%), Positives = 175/287 (60%), Gaps = 2/287 (0%)
Frame = +2
Query: 53 RLDIRPATDDIAPRATDPRXXXXXXXXXXXXXXXXXEMEEVERWESVAAEIMPERKKLEF 232
+L + + DDI R +P+ M+ +E WE V IMPERK LEF
Sbjct: 84 QLSLVSSFDDIIARPVEPKCRFQDGILHTGLLVKNDVMQVLETWEDVKTLIMPERKCLEF 143
Query: 233 FVGHDGEQYKLEVNFADVLRSLGCRLSAGGEEGELNAVLLQLKYAPKIYRRISGPTLNSK 412
+V H E Y+LEV F DV+ + C L E + +A+LL+LK+APK+Y+R+SGP + SK
Sbjct: 144 WVSHAEECYRLEVQFGDVVEATVCSL-----ENQKSALLLKLKHAPKLYQRVSGPAVASK 198
Query: 413 FRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLELAEGLSVSEILTCLP-YSQQLG 589
F DRYHIC+ED FLWVRT DFS SIG S LC E +G S++L+ LP ++ +
Sbjct: 199 FSADRYHICKEDCEFLWVRTTDFSNIKSIGCSSSLCWETEDGWLSSDLLSSLPCCNKDVI 258
Query: 590 DLALRKGESLCSSSQLVPIISYPESFTEKYEILFQLNSVLHMQKISCGQVNTEFFDILNS 769
DL L K + S S+ VP++ P YEILFQLNS++ QKIS G VN + ++L+
Sbjct: 259 DLDLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQLNSLVQTQKISLGAVNPDLIEVLSK 318
Query: 770 LSVETAMKLLRKFHKLKTTCYEPVRFIKNQLANMRK-QKNFVQQKHS 907
L ++TAM +L+K HKL++TC+EP+ FIK +L + K KN + +S
Sbjct: 319 LELDTAMMILQKMHKLQSTCFEPLTFIKTRLHVLGKNNKNQLSSSYS 365
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 987 bits (2552), Expect(2) = 0.0
Identities = 484/746 (64%), Positives = 592/746 (79%), Gaps = 4/746 (0%)
Frame = +3
Query: 918 LMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGKLSSDTLSTIV 1097
+MS HRVLVTPS+VY GPELETSNY+VK F+ AS+FLRV+FVEEDWGKLS + +S V
Sbjct: 373 MMSVHRVLVTPSKVYCLGPELETSNYIVKNFALHASDFLRVTFVEEDWGKLSPNAISMSV 432
Query: 1098 EHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMFASTGSETAES 1277
E G+F+KPYRT IY R+ +ILRDG+ IGSK+F FLAFSASQLRSNS WMFAS AE
Sbjct: 433 EQGIFAKPYRTKIYHRILSILRDGLVIGSKRFLFLAFSASQLRSNSVWMFASNEHVKAED 492
Query: 1278 IRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITDGVKYCFSDGI 1457
IR WMG FNKI SVSKCAAR+GQLFS+S QT E+ S V+++ D+EV +DGV YCFSDGI
Sbjct: 493 IREWMGCFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPDIEVTSDGVSYCFSDGI 552
Query: 1458 GKISLAFARQVAQKCGLNTTPSAFQIRYGGYKGVVAVDRTSFRKLSLRASMRKFDSDVTM 1637
GKIS AFA QVAQKCGL+ TPSAFQIRYGGYKGV+AVDR SFRKLSLR SM KF+S M
Sbjct: 553 GKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRM 612
Query: 1638 LNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLTNRGIALSELNRM 1817
LN+TK S+++PCYLNREI+ LLSTLG++D++FE +L + + L +MLT AL L +
Sbjct: 613 LNITKWSDAMPCYLNREIVILLSTLGVEDKVFEDLLDNHLHLLGKMLTTNEAALDVLESI 672
Query: 1818 TGAEIRTAV-KMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVPKGRVLLGCLDE 1994
G +++ + +ML GY PNLEP+LSM+L++H E QLSD+RSRCRIF+ KGRVL+GCLDE
Sbjct: 673 GGGDVKKILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRSRCRIFIHKGRVLVGCLDE 732
Query: 1995 TGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKNPCLHPGDIRVLHA 2174
TGILNYGQVY R+T+T+ EL+ ++FF+ D+TTA TKNPCLHPGD+RVL A
Sbjct: 733 TGILNYGQVYARITMTKAELQSAQQSFFQKVDETTAVVRGNVVVTKNPCLHPGDVRVLEA 792
Query: 2175 VYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPLETDTPMDYVP 2354
VYE+ L++ VDC++FPQKGERPHPNECSGGDLDGDLYF+ WDENLIP +T TPMDY
Sbjct: 793 VYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFISWDENLIPRQTVTPMDYTG 852
Query: 2355 RRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKARSPQCLQLAKLHSM 2534
RR R+ DHEV L+EIQ+FF+DYMI+D LGAIS AHLV+ADREP KA +P+CLQLA LHSM
Sbjct: 853 RRTRIMDHEVTLQEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSM 912
Query: 2535 AVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRATVDETEKENPTATE 2714
AVDFAKTGA AEMPR L+PRE+PDF+ERWD+PMYIS GVLGKLYRA V+ + + N
Sbjct: 913 AVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLYRAIVNSSVRSNSDDLG 972
Query: 2715 SGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEHEDEILTGNLRNKS 2894
S + YD+ L +G+EAF+ A+ ++ Y DR++SL+NYYGAE E EILTGNLR KS
Sbjct: 973 SVRAIQDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNYYGAEKEVEILTGNLRQKS 1032
Query: 2895 IYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCYEVELPKMASAWYHVTYHPNY-YS 3071
+YLQRD +Y E+KDRIL++ +SLQKEV GWF C E E K+ASAWYHVTYHP+Y
Sbjct: 1033 VYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEHKKLASAWYHVTYHPSYCEG 1092
Query: 3072 TTNFLSFPWIVCDVLLNIK--DSRKL 3143
+ N L FPW+V D+LL+IK ++RK+
Sbjct: 1093 SANCLGFPWVVGDILLDIKLHNTRKI 1118
Score = 231 bits (589), Expect(2) = 0.0
Identities = 122/256 (47%), Positives = 167/256 (65%), Gaps = 2/256 (0%)
Frame = +2
Query: 164 MEEVERWESVAAEIMPERKKLEFFVGH-DGEQYKLEVNFADVLRSLGCRLSAGGEEGELN 340
ME +E WE+V IMPERK LEF+V H GE Y+LEV F D++ + C L E E
Sbjct: 121 MEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCECSL-----EDEKT 175
Query: 341 AVLLQLKYAPKIYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLC 520
A+LL+LK+APK+Y+R+SGP + SKF DRYH+C ED FLWVRT DFS SIG S C
Sbjct: 176 ALLLKLKHAPKLYQRVSGPGVASKFSSDRYHVCEEDCEFLWVRTTDFSAMKSIGCSSSPC 235
Query: 521 LELAEGLSVSEILTCLPY-SQQLGDLALRKGESLCSSSQLVPIISYPESFTEKYEILFQL 697
E+ +GL S++L+ LPY + + DL L + + S+S+LVP+ S+P YEILFQL
Sbjct: 236 WEIEDGLLSSDLLSGLPYCNNDVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQL 295
Query: 698 NSVLHMQKISCGQVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQLANMRK 877
NS++H KIS G V T+ ++L+ L ++TAM +L+K HKL++TC+EPV FIK +L + K
Sbjct: 296 NSLIHTHKISLGAVKTDLIEVLSKLELDTAMMILQKMHKLQSTCFEPVPFIKTRLHVLGK 355
Query: 878 QKNFVQQKHSGRKVDE 925
R V++
Sbjct: 356 NSKNQPSSSYSRLVNQ 371
>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum]
Length = 1119
Score = 987 bits (2551), Expect(2) = 0.0
Identities = 478/745 (64%), Positives = 585/745 (78%), Gaps = 2/745 (0%)
Frame = +3
Query: 918 LMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGKLSSDTLSTIV 1097
+MS HRVLVTPS++Y GPELETSNY+VK F+ AS+FLRV+FVEEDWGKL + +S V
Sbjct: 372 MMSVHRVLVTPSKIYCLGPELETSNYIVKNFASHASDFLRVTFVEEDWGKLFPNAVSMSV 431
Query: 1098 EHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMFASTGSETAES 1277
E G+F+KPYRT IY R+ +ILR+GI IG+K+F FLAFSASQLRSNS WMFAS AE
Sbjct: 432 EQGIFAKPYRTKIYHRILSILREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAED 491
Query: 1278 IRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITDGVKYCFSDGI 1457
IR WMG FNKI S+SKCAAR+GQLFS+S QT E+ + V+++ D+EV +DGV YCFSDGI
Sbjct: 492 IREWMGCFNKIRSISKCAARMGQLFSTSVQTMEVKLQHVEILPDIEVTSDGVSYCFSDGI 551
Query: 1458 GKISLAFARQVAQKCGLNTTPSAFQIRYGGYKGVVAVDRTSFRKLSLRASMRKFDSDVTM 1637
GKIS AFARQVAQKCGLN TPSAFQIRYGGYKGV+AVDR SFRKLSLR SM KF+S M
Sbjct: 552 GKISQAFARQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRM 611
Query: 1638 LNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLTNRGIALSELNRM 1817
LN+TK S+++PCYLNREI+ LLSTLG++D+ FE +L + + L +MLT AL L M
Sbjct: 612 LNITKWSDAMPCYLNREIVILLSTLGVEDKAFEDLLDNHLCLLGKMLTTNEAALDVLESM 671
Query: 1818 TGAEIRTAV-KMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVPKGRVLLGCLDE 1994
G E++ + +ML+ GY PN EP+LSM+L++H E Q+SD+RSRCRIF+PKGR+L+GCLDE
Sbjct: 672 GGGEVKKILMRMLLQGYAPNQEPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGCLDE 731
Query: 1995 TGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKNPCLHPGDIRVLHA 2174
TGIL YGQVY+R+T+T+ EL++ + FF+ D+TTA TKNPCLHPGD+RVL A
Sbjct: 732 TGILKYGQVYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEA 791
Query: 2175 VYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPLETDTPMDYVP 2354
VYE+ L++ VDC++FPQKGERPHPNECSGGDLDGDLYF+CWDE+LIP +T TPMDY
Sbjct: 792 VYEVTLEEKTWVDCIIFPQKGERPHPNECSGGDLDGDLYFICWDESLIPCQTVTPMDYTG 851
Query: 2355 RRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKARSPQCLQLAKLHSM 2534
RRPR+ DHEV LEEIQ+FF+DYMI+D LGAIS AHLV+ADREP KA + +CLQLA LHSM
Sbjct: 852 RRPRIMDHEVTLEEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNSKCLQLATLHSM 911
Query: 2535 AVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRATVDETEKENPTATE 2714
AVDFAKTGA AEMPR L+PRE+PDFMERWD+PMYIS GVLGKLYR + + N
Sbjct: 912 AVDFAKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGVMKSYIRRNSDDLS 971
Query: 2715 SGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEHEDEILTGNLRNKS 2894
+ + YD+DL VEG+EAF A+ + Y D ++SL+NYYGAE E EILTGNLR KS
Sbjct: 972 ADRAIQDAYDHDLLVEGYEAFTETAKTHKAMYLDSMNSLLNYYGAEKEVEILTGNLRQKS 1031
Query: 2895 IYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCYEVELPKMASAWYHVTYHPNY-YS 3071
+YLQRD +Y E+KDRIL++ +SL KEV GWF C E + K+ASAWYHVTYHP+Y +
Sbjct: 1032 VYLQRDNRRYFELKDRILVSAKSLHKEVKGWFTSCCQEDDHQKLASAWYHVTYHPSYCHE 1091
Query: 3072 TTNFLSFPWIVCDVLLNIKDSRKLK 3146
+ N L FPW+V D+LLN+K K
Sbjct: 1092 SANCLGFPWVVGDILLNMKSHNTRK 1116
Score = 219 bits (558), Expect(2) = 0.0
Identities = 121/284 (42%), Positives = 168/284 (59%), Gaps = 1/284 (0%)
Frame = +2
Query: 14 LATDGRLPDFLRTRLDIRPATDDIAPRATDPRXXXXXXXXXXXXXXXXXEMEEVERWESV 193
LA G L F +L + + DDI R +P+ M+ +E WE V
Sbjct: 72 LAEQGNLL-FKGHQLSLVSSFDDIITRPVEPKCRFQAGILHTGLLVEKDVMQVLETWEDV 130
Query: 194 AAEIMPERKKLEFFVGHDGEQYKLEVNFADVLRSLGCRLSAGGEEGELNAVLLQLKYAPK 373
IMPERK LEF+V H E Y+LEV F DV C + E + +A+LL+LK+APK
Sbjct: 131 KTLIMPERKCLEFWVSHAEECYRLEVQFGDVTEGTLCSV-----ENQKSALLLKLKHAPK 185
Query: 374 IYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLELAEGLSVSE 553
+Y+R+SGP + SKF DRYHIC+ED FLW+RT DFS SIG S LC E +G S+
Sbjct: 186 LYQRVSGPAVASKFSADRYHICKEDCEFLWIRTTDFSNIKSIGCSSSLCWETEDGWLSSD 245
Query: 554 ILTCLP-YSQQLGDLALRKGESLCSSSQLVPIISYPESFTEKYEILFQLNSVLHMQKISC 730
+ + LP +Q + DL L K + S S+ VP++ P YEILFQLNS++ QKIS
Sbjct: 246 LFSSLPCCNQDVIDLDLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQLNSLVQTQKISL 305
Query: 731 GQVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQL 862
G +N ++L+ L ++TAM +L+K HKL++ C++P+ FIK +L
Sbjct: 306 GAINPNLIEVLSKLELDTAMMILQKMHKLQSICFDPLLFIKTRL 349
>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 964 bits (2491), Expect(2) = 0.0
Identities = 465/743 (62%), Positives = 582/743 (78%), Gaps = 2/743 (0%)
Frame = +3
Query: 918 LMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGKLSSDTLSTIV 1097
+MSC R L+TP+++Y GPELET+NYVVK F E AS+F+RV+FVEEDW KLS++ +ST V
Sbjct: 371 VMSCRRALITPTKIYCLGPELETANYVVKNFVEYASDFMRVTFVEEDWSKLSANAISTGV 430
Query: 1098 EHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMFASTGSETAES 1277
G+FS+P++T IY R+ +L++GI IG K+FEFLAFSASQLRSNS WMFAS AE
Sbjct: 431 HLGVFSRPFKTKIYDRILYVLQNGIVIGDKRFEFLAFSASQLRSNSVWMFASNDEVKAED 490
Query: 1278 IRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITDGVKYCFSDGI 1457
IR WMG F KI S+SKCA+R+GQLFSSS T +P +DV++I+D+EV TDG+ YCFSDGI
Sbjct: 491 IREWMGCFKKIRSISKCASRMGQLFSSSMPTLVVPVQDVEIIDDIEVKTDGINYCFSDGI 550
Query: 1458 GKISLAFARQVAQKCGLNTTPSAFQIRYGGYKGVVAVDRTSFRKLSLRASMRKFDSDVTM 1637
GKISL FARQVA+KCGLN PSAFQIRYGGYKGVVAVDR SF K+SLR SM KF+S V M
Sbjct: 551 GKISLPFARQVAEKCGLNHIPSAFQIRYGGYKGVVAVDRNSFWKMSLRDSMLKFESKVRM 610
Query: 1638 LNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLTNRGIALSELNRM 1817
LNVTK SES+PC+LNREI++L STLGIKDE+FE M +Q+ L +MLTNR AL L +
Sbjct: 611 LNVTKWSESMPCFLNREIVTLFSTLGIKDEVFERMQEEQLCLLGKMLTNREAALDTLQSL 670
Query: 1818 TGAEIRTAVKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVPKGRVLLGCLDET 1997
G + + ++ YEPN++P+LSM+L+AH E LSD++SRCRIFVPKGR+L+GCLDET
Sbjct: 671 GGVNSKNILVEMLQFYEPNVQPYLSMMLQAHYENLLSDLKSRCRIFVPKGRILIGCLDET 730
Query: 1998 GILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKNPCLHPGDIRVLHAV 2177
G LNYGQVY+ + + + EL+ D+++F+ D+ TA TKNPCLHPGD+RVL AV
Sbjct: 731 GTLNYGQVYLCIKMKKAELECADQSYFRKVDEETAIVIGKVVVTKNPCLHPGDVRVLEAV 790
Query: 2178 YELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPLETDTPMDYVPR 2357
YE QL++ GLVDC+VFPQKGERPHPNECSGGDLDGD +F+ WD++LIP +T+ PMDY R
Sbjct: 791 YEPQLEEKGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWDKDLIPCQTEPPMDYTGR 850
Query: 2358 RPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKARSPQCLQLAKLHSMA 2537
RPR+ DHEV LEEIQKFF+DYMIND LGAIS AHLV+ADREP KA S CL LA LHSMA
Sbjct: 851 RPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPDKACSENCLALATLHSMA 910
Query: 2538 VDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRATVDETEKENPTATES 2717
VDFAKTGAPAEMPR L+PRE+PDFM+R ++PMY S+GVLGKLYRAT++ T + +
Sbjct: 911 VDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRATINSTVQTRSKFVWT 970
Query: 2718 GPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEHEDEILTGNLRNKSI 2897
++ +YD+DLEV GFE+ + AE ++ Y +R+S LM+YY E+EDEILTGN+ NK+
Sbjct: 971 KEMAELVYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEYEDEILTGNIYNKAQ 1030
Query: 2898 YLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCYEV-ELPKMASAWYHVTYHPNYY-S 3071
+L RD +YGEMK+RI+++V+ LQ+E WFK SC + E K+ASAWY+VTYHPNY+
Sbjct: 1031 FLLRDNRRYGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQKLASAWYYVTYHPNYFQE 1090
Query: 3072 TTNFLSFPWIVCDVLLNIKDSRK 3140
N LSFPWIV D+LL +K K
Sbjct: 1091 RMNSLSFPWIVGDILLRVKSRNK 1113
Score = 207 bits (526), Expect(2) = 0.0
Identities = 105/231 (45%), Positives = 148/231 (64%), Gaps = 1/231 (0%)
Frame = +2
Query: 173 VERWESVAAEIMPERKKLEFFVGHDGEQYKLEVNFADVLRSLGCRLSAGGEEGELNAVLL 352
+ERWE V IMPER++LEF+V DGE YKL+ F D+ ++GC NA+LL
Sbjct: 124 LERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDIFETVGCCFDGSA----CNALLL 179
Query: 353 QLKYAPKIYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLELA 532
+++YAP+IY+++SGP + SKF DRYHIC+E FLWVRT DFS SIG+S E
Sbjct: 180 RVRYAPRIYQKVSGPNVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFN 239
Query: 533 EGLSVSEILTCLP-YSQQLGDLALRKGESLCSSSQLVPIISYPESFTEKYEILFQLNSVL 709
G S+S++ T LP Y + + +L S S++VP++ +P YEILFQLN+++
Sbjct: 240 AGFSISDMSTYLPCYREDIQSPSLEARREFSSPSEIVPLVKFPSDSKLAYEILFQLNALV 299
Query: 710 HMQKISCGQVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQL 862
H QKIS V+T+ IL+ L VETA+ +L+K L++ CY PV F+K +L
Sbjct: 300 HTQKISIAAVDTDLIGILSGLPVETAVMILQKLRLLQSPCYNPVSFVKAKL 350
>gb|EAY94464.1| hypothetical protein OsI_16234 [Oryza sativa Indica Group]
Length = 1136
Score = 957 bits (2475), Expect(2) = 0.0
Identities = 480/764 (62%), Positives = 584/764 (76%), Gaps = 10/764 (1%)
Frame = +3
Query: 888 LSNKSTQAG--KLMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDW 1061
LSN+ G KLM C+RV +TPS+++ GPE E +NYVVK+ S AS+F+RV+FV+EDW
Sbjct: 361 LSNEGEGEGERKLMKCYRVNITPSKIFCLGPEEEVTNYVVKHHSAYASDFVRVTFVDEDW 420
Query: 1062 GKLSSDTLSTIVEHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFW 1241
KLSS+ +S +E G FSKP++T +Y R+ +IL+ G SIG K FEFLAFSASQLR NS W
Sbjct: 421 SKLSSNAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVW 480
Query: 1242 MFASTGSETAESIRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVI 1421
MFAS S A IR WMG F I SVSKCAAR+GQLFSSS QTFE+ DV+VI D+E+
Sbjct: 481 MFASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDIEIT 540
Query: 1422 TDGVKYCFSDGIGKISLAFARQVAQKCGLNTT--PSAFQIRYGGYKGVVAVDRTSFRKLS 1595
TDG KY FSDGIGKISL FA++VA GL+ T PSAFQIRYGGYKGV+A+D S LS
Sbjct: 541 TDGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSIDLS 600
Query: 1596 LRASMRKFDSDVTMLNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEM 1775
LR SM+KF+S+ MLN+T S+S PCY+NREIISLLSTLGI+DEIF +M D++R +EM
Sbjct: 601 LRPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEM 660
Query: 1776 LTNRGIALSELNRMTGAEIRTAVKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIF 1955
LTN+ +ALS L ++ G+E +TAVKML+ GYEP+ EP+LSMIL+AH+E +L+DIR+RC+I
Sbjct: 661 LTNKEVALSVLGKLGGSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIH 720
Query: 1956 VPKGRVLLGCLDETGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKN 2135
VPKGRVL+GCLDETG+L YGQVYIR+T +E KD ++++F N D TA TKN
Sbjct: 721 VPKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVVGKVAITKN 780
Query: 2136 PCLHPGDIRVLHAVYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENL 2315
PCLHPGDIRVL A+Y+ L +G+VDC+VFPQ+GERPHPNECSGGDLDGDLYF+ WD+ L
Sbjct: 781 PCLHPGDIRVLEAIYDPDL--VGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKL 838
Query: 2316 IPLETDTPMDYVPRRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKAR 2495
IP + DTPMDY RPR+ DH V LEEIQK F+DYMIND+LGAIS AHL++ADR P KAR
Sbjct: 839 IPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKAR 898
Query: 2496 SPQCLQLAKLHSMAVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRAT 2675
SP+CLQLA LHSMAVDFAKTGAPAEMPR LRPREYPDFMERW++PMYIS GVLGKLYR+
Sbjct: 899 SPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSA 958
Query: 2676 VDETEKENPTATESGPLSRS------IYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMN 2837
+ EK +SG LS S YD DLEV G + FL AEE+ + Y ++L++LMN
Sbjct: 959 MGHMEKSG----DSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMN 1014
Query: 2838 YYGAEHEDEILTGNLRNKSIYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCYEVEL 3017
YY AEHEDEILTGN+RNK +YL+RD +Y EMKDRI+ AV +L +E GW S E +
Sbjct: 1015 YYRAEHEDEILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSSRKEEDA 1074
Query: 3018 PKMASAWYHVTYHPNYYSTTNFLSFPWIVCDVLLNIKDSRKLKR 3149
+MASAWY VTYHP+ F SFPWI CD LL IK S +L+R
Sbjct: 1075 SRMASAWYRVTYHPDRRRGKRFWSFPWIACDNLLAIKASSQLRR 1118
Score = 232 bits (591), Expect(2) = 0.0
Identities = 114/294 (38%), Positives = 177/294 (60%)
Frame = +2
Query: 5 ACCLATDGRLPDFLRTRLDIRPATDDIAPRATDPRXXXXXXXXXXXXXXXXXEMEEVERW 184
A LA+ GRLP FL L + P+ D+ PRA+D E + W
Sbjct: 71 AAGLASSGRLPRFLGALLSVSPSPVDLLPRASDLSLRAAGAGLVVGDRVAERVFEAADAW 130
Query: 185 ESVAAEIMPERKKLEFFVGHDGEQYKLEVNFADVLRSLGCRLSAGGEEGELNAVLLQLKY 364
+ V AE++P +++++ ++ HD ++YKLEV F D+ LGC L G A+LLQL Y
Sbjct: 131 DGVRAEVIPGKRRVDLYLEHDPQRYKLEVLFEDMKDCLGCTLDGMG------AILLQLNY 184
Query: 365 APKIYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLELAEGLS 544
AP+I+ ISGP +NS+F DR+H C+ED +F WVR +DF+ + S G+ L L+L +
Sbjct: 185 APRIHTAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSAL 244
Query: 545 VSEILTCLPYSQQLGDLALRKGESLCSSSQLVPIISYPESFTEKYEILFQLNSVLHMQKI 724
VS+IL LP+S LG+L + + + +SS +VP++ P ++ YE+LF+LNS++HM KI
Sbjct: 245 VSDILKSLPFSGNLGELTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKI 304
Query: 725 SCGQVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQLANMRKQKN 886
VN + F L L V+ + ++ K HKL++TCYEP++FI+ + +M++ N
Sbjct: 305 VAKHVNADLFKALQELPVDVSRRIFEKMHKLESTCYEPLQFIQQEAYSMKRSHN 358
>sp|Q7XM31.1|RDR2_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 2; Short=OsRDR2
gi|32492169|emb|CAE04828.1| OSJNBb0048E02.13 [Oryza
sativa Japonica Group]
Length = 1136
Score = 953 bits (2463), Expect(2) = 0.0
Identities = 479/764 (62%), Positives = 583/764 (76%), Gaps = 10/764 (1%)
Frame = +3
Query: 888 LSNKSTQAG--KLMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDW 1061
LSN+ G KLM C+RV +TPS+++ GPE E +NYVVK+ S AS+F+RV+FV+EDW
Sbjct: 361 LSNEGEGEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDW 420
Query: 1062 GKLSSDTLSTIVEHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFW 1241
KLSS+ +S +E G FSKP++T +Y R+ +IL+ G SIG K FEFLAFSASQLR NS W
Sbjct: 421 SKLSSNAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVW 480
Query: 1242 MFASTGSETAESIRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVI 1421
MFAS S A IR WMG F I SVSKCAAR+GQLFSSS QTFE+ DV+VI D+E+
Sbjct: 481 MFASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDIEIT 540
Query: 1422 TDGVKYCFSDGIGKISLAFARQVAQKCGLNTT--PSAFQIRYGGYKGVVAVDRTSFRKLS 1595
TDG KY FSDGIGKISL FA++VA GL+ T PSAFQIRYGGYKGV+A+D S LS
Sbjct: 541 TDGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSIDLS 600
Query: 1596 LRASMRKFDSDVTMLNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEM 1775
LR SM+KF+S+ MLN+T S+S PCY+NREIISLLSTLGI+DEIF +M D++R +EM
Sbjct: 601 LRPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEM 660
Query: 1776 LTNRGIALSELNRMTGAEIRTAVKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIF 1955
LTN+ +ALS L ++ G+E +TAVKML+ GYEP+ EP+LSMIL+AH+E +L+DIR+RC+I
Sbjct: 661 LTNKEVALSVLGKLGGSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIH 720
Query: 1956 VPKGRVLLGCLDETGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKN 2135
VPKGRVL+GCLDETG+L YGQVYIR+T +E KD ++++F N D TA TKN
Sbjct: 721 VPKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVVGKVAITKN 780
Query: 2136 PCLHPGDIRVLHAVYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENL 2315
PCLHPGDIRVL A+Y+ L +G+VDC+VFPQ+GERPHPNECSGGDLDGDLYF+ WD+ L
Sbjct: 781 PCLHPGDIRVLEAIYDPDL--VGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKL 838
Query: 2316 IPLETDTPMDYVPRRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKAR 2495
IP + DTPMDY RPR+ DH V LEEIQK F+DYMIND+LGAIS AHL++ADR P KAR
Sbjct: 839 IPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKAR 898
Query: 2496 SPQCLQLAKLHSMAVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRAT 2675
SP+CLQLA LHSMAVDFAKTGAPAEMPR LRPREYPDFMERW++PMYIS GVLGKLYR+
Sbjct: 899 SPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSA 958
Query: 2676 VDETEKENPTATESGPLSRS------IYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMN 2837
+ EK +SG LS S YD DLEV G + FL AEE+ + Y ++L++LMN
Sbjct: 959 MGHMEKSG----DSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMN 1014
Query: 2838 YYGAEHEDEILTGNLRNKSIYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCYEVEL 3017
YY AE EDEILTGN+RNK +YL+RD +Y EMKDRI+ AV +L +E GW S E +
Sbjct: 1015 YYRAELEDEILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSSRKEEDA 1074
Query: 3018 PKMASAWYHVTYHPNYYSTTNFLSFPWIVCDVLLNIKDSRKLKR 3149
+MASAWY VTYHP+ F SFPWI CD LL IK S +L+R
Sbjct: 1075 SRMASAWYRVTYHPDRRRGKRFWSFPWIACDNLLAIKASSQLRR 1118
Score = 230 bits (586), Expect(2) = 0.0
Identities = 113/294 (38%), Positives = 176/294 (59%)
Frame = +2
Query: 5 ACCLATDGRLPDFLRTRLDIRPATDDIAPRATDPRXXXXXXXXXXXXXXXXXEMEEVERW 184
A LA+ GRLP FL L + P+ D+ PRA+D E + W
Sbjct: 71 AAGLASSGRLPRFLGALLSVSPSPVDLLPRASDLSLRAAGAGLVVGDRVAERVFEAADAW 130
Query: 185 ESVAAEIMPERKKLEFFVGHDGEQYKLEVNFADVLRSLGCRLSAGGEEGELNAVLLQLKY 364
+ V AE++P +++++ ++ HD ++YKLEV F D+ LGC L G A+LLQL Y
Sbjct: 131 DGVRAEVIPGKRRVDLYLEHDSQRYKLEVLFEDMKDCLGCTLDGMG------AILLQLNY 184
Query: 365 APKIYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLELAEGLS 544
AP+I+ ISGP +NS+F DR+H C+ED +F WVR +DF+ + S G+ L L+L +
Sbjct: 185 APRIHTAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSAL 244
Query: 545 VSEILTCLPYSQQLGDLALRKGESLCSSSQLVPIISYPESFTEKYEILFQLNSVLHMQKI 724
VS+IL LP+S LG+L + + + +SS +VP++ P ++ YE+LF+LNS++HM KI
Sbjct: 245 VSDILKSLPFSGNLGELTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKI 304
Query: 725 SCGQVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQLANMRKQKN 886
VN + F L L V+ + ++ K HKL++TCY P++FI+ + +M++ N
Sbjct: 305 VAKHVNADLFKALQELPVDVSRRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHN 358
>dbj|BAJ85295.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1127
Score = 936 bits (2418), Expect(2) = 0.0
Identities = 471/763 (61%), Positives = 575/763 (75%), Gaps = 6/763 (0%)
Frame = +3
Query: 888 LSNKSTQAGKLMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGK 1067
LS+K+ GKLM C+R+ +TPS++Y GPE E SNYVVK+ + AS+F RV+FV+EDW K
Sbjct: 363 LSSKTEGEGKLMMCYRIHITPSKIYCLGPEEEVSNYVVKHHKQYASDFTRVTFVDEDWSK 422
Query: 1068 LSSDTLSTIVEHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMF 1247
L D +S G FS+P +T +Y R+ +IL++G SIG KK+EFLAFSASQLR +S WMF
Sbjct: 423 LFPDAISARTGRGFFSQPLKTGLYYRILSILKEGFSIGPKKYEFLAFSASQLRGSSVWMF 482
Query: 1248 ASTGSETAESIRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITD 1427
AS S AE IR WMG F +I SVSKCAAR+GQLFSSS QT +I RDV+ I D+EV TD
Sbjct: 483 ASNDSLKAEDIRRWMGNFEEIRSVSKCAARMGQLFSSSRQTLDILPRDVEEIPDIEVTTD 542
Query: 1428 GVKYCFSDGIGKISLAFARQVAQKCGLNTT--PSAFQIRYGGYKGVVAVDRTSFRKLSLR 1601
G KY FSDGIGKIS FA+++A + GL+ T PSAFQIRYGGYKGVVAVD SFR LSLR
Sbjct: 543 GTKYIFSDGIGKISERFAKEMACRIGLDYTNPPSAFQIRYGGYKGVVAVDPDSFRNLSLR 602
Query: 1602 ASMRKFDSDVTMLNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLT 1781
SM+KF+S M N+T +S+S PCY+NREIISLLSTLGI+DEIFE M +R LDEMLT
Sbjct: 603 PSMKKFESKSRMFNITSTSKSQPCYMNREIISLLSTLGIRDEIFELMQQHDMRELDEMLT 662
Query: 1782 NRGIALSELNRMTGAEIRTAVKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVP 1961
NR ALS L ++ AE +TA K+L+ GYEP+LEP+L MIL+AH++ +L+DIR+RC+I VP
Sbjct: 663 NREAALSVLGKIGSAETKTASKILLQGYEPSLEPYLLMILKAHQDNRLTDIRTRCKIHVP 722
Query: 1962 KGRVLLGCLDETGILNYGQVYIRVTLTEEELKDKDETFFK--NFDQTTAXXXXXXXXTKN 2135
KGRVL+GCLDETG L YGQVYIR+T +E KD + +F N TA +KN
Sbjct: 723 KGRVLIGCLDETGELEYGQVYIRITKNSKEQKDNCQPYFSEDNGKDKTAVVVGKVAVSKN 782
Query: 2136 PCLHPGDIRVLHAVYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENL 2315
PCLHPGDIRVL AVY+ L LVDCVVFPQ+GERPHPNECSGGDLDGDLYF+ WDE L
Sbjct: 783 PCLHPGDIRVLEAVYDHGLYSKNLVDCVVFPQRGERPHPNECSGGDLDGDLYFITWDEKL 842
Query: 2316 IPLETDTPMDYVPRRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKAR 2495
IP + D+PMDY RPR+ DH V LEEIQK+F+DYMIND+LGAIS AHLV+ADR P KAR
Sbjct: 843 IPEKVDSPMDYTAARPRIMDHVVTLEEIQKYFVDYMINDSLGAISTAHLVHADRHPMKAR 902
Query: 2496 SPQCLQLAKLHSMAVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRAT 2675
SP+CLQLA LHSMAVDFAK+GAPAEMPR+LRP+EYPDFMERWD+P YIS G LGKLYRA
Sbjct: 903 SPECLQLAALHSMAVDFAKSGAPAEMPRSLRPKEYPDFMERWDKPTYISNGPLGKLYRAA 962
Query: 2676 VDETEKENPTATESGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEH 2855
+ ++ + P+ +D DLEV GFE FL AEE D Y+++LS+LM+YYG EH
Sbjct: 963 ASRMQSAPAPSSSAQPI--PAFDPDLEVPGFEEFLVSAEECYDLYAEKLSTLMSYYGTEH 1020
Query: 2856 EDEILTGNLRNKSIYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCYEVELPKMASA 3035
EDEILTGN+RN+ +YL++D +Y EMKDRI+ +V L KEV GWF S + E + ASA
Sbjct: 1021 EDEILTGNIRNRLLYLKKDNKRYFEMKDRIIDSVEGLHKEVRGWFT-SRPKAEAARRASA 1079
Query: 3036 WYHVTYHPNYY--STTNFLSFPWIVCDVLLNIKDSRKLKR*KV 3158
WYH+ YHP+++ F SFPWI+CD LL IK+S + R +V
Sbjct: 1080 WYHMAYHPDHHQPGKRRFWSFPWIICDELLTIKESSRRHRQQV 1122
Score = 212 bits (540), Expect(2) = 0.0
Identities = 112/291 (38%), Positives = 165/291 (56%)
Frame = +2
Query: 14 LATDGRLPDFLRTRLDIRPATDDIAPRATDPRXXXXXXXXXXXXXXXXXEMEEVERWESV 193
LA+ GRLP FL + L + PA D+ PRA D E + W+SV
Sbjct: 76 LASSGRLPRFLGSLLSVSPAPADLLPRAPDLSLRVADARLVVGNRVAEREFAAADSWDSV 135
Query: 194 AAEIMPERKKLEFFVGHDGEQYKLEVNFADVLRSLGCRLSAGGEEGELNAVLLQLKYAPK 373
EI+P +++++ ++ HD + +KLEV F D+ C G +LLQL YAP+
Sbjct: 136 RVEIIPGKRRMDVYLNHDSQMFKLEVFFEDIRNCYQCSFDGAG------GILLQLMYAPR 189
Query: 374 IYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLELAEGLSVSE 553
I ISGP + S+F DR+H C+ED +F WVR +DF+ + S GK L L L EG VS
Sbjct: 190 ICTTISGPAVYSRFSDDRFHACKEDAKFTWVRALDFTPNHSFGKCSTLALVLDEGAPVSF 249
Query: 554 ILTCLPYSQQLGDLALRKGESLCSSSQLVPIISYPESFTEKYEILFQLNSVLHMQKISCG 733
IL LP S +LG+L + + SSS++VP++ P + YE+LF+LNS++HM K+
Sbjct: 250 ILNSLPLSGELGELVISSMDFFGSSSKVVPLVDCPSGCSVSYEVLFRLNSLVHMGKLVAK 309
Query: 734 QVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQLANMRKQKN 886
VN + F L + V + ++ K KL+ TCYEP++FI+ Q A+ RK+ +
Sbjct: 310 HVNADLFKALEEIPVHISRRIFEKMSKLEFTCYEPLQFIQ-QEAHSRKRSH 359
>ref|XP_003579930.1| PREDICTED: probable RNA-dependent RNA polymerase 2-like [Brachypodium
distachyon]
Length = 1140
Score = 932 bits (2410), Expect(2) = 0.0
Identities = 465/763 (60%), Positives = 580/763 (76%), Gaps = 5/763 (0%)
Frame = +3
Query: 888 LSNKSTQAGKLMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGK 1067
LS+K GKLM C+R+ +TPS++Y GPE E SNYVVK+ SE AS+F+RV+FV+EDW K
Sbjct: 360 LSSKREGEGKLMRCYRIHITPSKIYCLGPEEEASNYVVKHHSEYASDFVRVTFVDEDWSK 419
Query: 1068 LSSDTLSTIVEHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMF 1247
LS + +S +E G FS+P++T +Y R+ +IL++G IG KKFEFLAFSASQLR S WMF
Sbjct: 420 LSVNAISARIEQGFFSQPFKTGLYYRILSILKEGFIIGPKKFEFLAFSASQLREGSVWMF 479
Query: 1248 ASTGSETAESIRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITD 1427
AS S AESIR WMG F +I SVSKCAAR+GQLFSSS QT E+ DV+ I D+EV T+
Sbjct: 480 ASNDSLNAESIRRWMGHFEEIRSVSKCAARMGQLFSSSRQTVEVRPWDVEEIPDIEVTTN 539
Query: 1428 GVKYCFSDGIGKISLAFARQVAQKCGLNTT--PSAFQIRYGGYKGVVAVDRTSFRKLSLR 1601
KY FSDGIGK+S+ FAR++A + GL+ T PSAFQIR+GGYKGV+AVD +SFR LSLR
Sbjct: 540 NTKYIFSDGIGKMSVRFAREIAYRIGLDHTNPPSAFQIRFGGYKGVIAVDPSSFRNLSLR 599
Query: 1602 ASMRKFDSDVTMLNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLT 1781
SMRKF+SD MLN+T S+S PCY+NREIISLLSTLGI+DE+FE M D +R LDEMLT
Sbjct: 600 PSMRKFESDCRMLNITSWSKSQPCYVNREIISLLSTLGIRDEVFELMQQDDMRELDEMLT 659
Query: 1782 NRGIALSELNRMTGAEIRTAVKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVP 1961
N+ +ALS L ++ AE +TA ML+ GYEP EP+L MIL+AH++ +L+DIRS+ +I VP
Sbjct: 660 NKEVALSVLGKIGSAETKTAADMLLQGYEPISEPYLLMILKAHQDNRLTDIRSKFKIHVP 719
Query: 1962 KGRVLLGCLDETGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKNPC 2141
KGRVLLGCLDETG L YGQVYIR+T +E K+ ++ +F D T +KNPC
Sbjct: 720 KGRVLLGCLDETGKLKYGQVYIRITKNNKEQKENEQPYFSEDDGKTVTLVGKVAVSKNPC 779
Query: 2142 LHPGDIRVLHAVYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIP 2321
LHPGD+RVL AVY+ L LVDCVVFPQ+GERPHPNECSGGDLDGDLYFV WD+ LIP
Sbjct: 780 LHPGDVRVLEAVYDPGLHAKKLVDCVVFPQRGERPHPNECSGGDLDGDLYFVTWDDKLIP 839
Query: 2322 LETDTPMDYVPRRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKARSP 2501
+ D PMDY RPR+ DH V LEEIQ+ ++YM++D+LGAISNAHL++ADR+P KARSP
Sbjct: 840 EKADAPMDYTGARPRIMDHVVTLEEIQQHVVNYMLSDSLGAISNAHLIHADRDPMKARSP 899
Query: 2502 QCLQLAKLHSMAVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRATVD 2681
+CLQLA LHSMAVDFAKTGAPAE+PR+LRPRE+PDFMERWD+PMYIS GVLGKLYRA V
Sbjct: 900 ECLQLAALHSMAVDFAKTGAPAELPRSLRPREFPDFMERWDKPMYISNGVLGKLYRAAVS 959
Query: 2682 ETEKENPTATESGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEHED 2861
E + A++ S YD +L V GFE FL AE+ D Y ++L++LMNYYGAEHED
Sbjct: 960 RMESSHALASQ--VQSSPTYDRELAVPGFEEFLEDAEKHYDLYVEKLTTLMNYYGAEHED 1017
Query: 2862 EILTGNLRNKSIYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSC-YEVELPKMASAW 3038
EILTGN+RN+ +YL++D+ +Y +MKDRI +V +L +EV GWFK+ E E ++ASAW
Sbjct: 1018 EILTGNIRNRLLYLRKDRKRYSDMKDRIFDSVNALHEEVRGWFKNCLKAEEEASRVASAW 1077
Query: 3039 YHVTYHPNYY--STTNFLSFPWIVCDVLLNIKDSRKLKR*KVV 3161
Y V YHP++ F SFPWI+CD LL IK ++ + K+V
Sbjct: 1078 YRVAYHPDHRRPEKKQFWSFPWIICDKLLAIKATKSNRCRKLV 1120
Score = 207 bits (526), Expect(2) = 0.0
Identities = 106/283 (37%), Positives = 164/283 (57%)
Frame = +2
Query: 14 LATDGRLPDFLRTRLDIRPATDDIAPRATDPRXXXXXXXXXXXXXXXXXEMEEVERWESV 193
LA+ GRLP FL + L + PA D+ PRA P E+E E + V
Sbjct: 76 LASSGRLPRFLGSPLSVSPAPADLLPRAPAPSLRASGARLLVGNRVAERELEMAETLDGV 135
Query: 194 AAEIMPERKKLEFFVGHDGEQYKLEVNFADVLRSLGCRLSAGGEEGELNAVLLQLKYAPK 373
E++P +++++ ++ HD +YKLEV F D+ C L +A+LLQL YAP+
Sbjct: 136 RVEVIPGKRRVDLYLTHDSHRYKLEVLFEDIRNCFRCSLDG------TSAILLQLTYAPR 189
Query: 374 IYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLELAEGLSVSE 553
I+ SGP + S+F+ DR H C+ED +F WVR +DF+ + S GK L ++L E +S
Sbjct: 190 IHTAFSGPAVYSRFKDDRLHACKEDAKFTWVRALDFTPNQSFGKCSTLVIKLDEDALMSY 249
Query: 554 ILTCLPYSQQLGDLALRKGESLCSSSQLVPIISYPESFTEKYEILFQLNSVLHMQKISCG 733
IL LP+S LG+LA+ + + SS+ VP++ P + YE+LF+LNS++HM KI
Sbjct: 250 ILNTLPFSGVLGELAISSMDVVGPSSKAVPLVDCPHGCSVSYEVLFRLNSLVHMGKIVAK 309
Query: 734 QVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQL 862
VN + F L + + + ++ K KL++TCYEP++FI+++L
Sbjct: 310 HVNAKLFAFLEQVPLHISRRIFEKMSKLESTCYEPLQFIESEL 352
>ref|XP_003560510.1| PREDICTED: probable RNA-dependent RNA polymerase 2-like [Brachypodium
distachyon]
Length = 1138
Score = 931 bits (2407), Expect(2) = 0.0
Identities = 461/764 (60%), Positives = 589/764 (77%), Gaps = 6/764 (0%)
Frame = +3
Query: 888 LSNKSTQAGKLMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGK 1067
LS+K GKLM C+R+ +TPS++Y GP+ E SNYVVK+ SE AS+F+RV+FV+EDW K
Sbjct: 357 LSSKREGEGKLMRCYRIHITPSKIYCLGPQEEASNYVVKHHSEYASDFVRVTFVDEDWSK 416
Query: 1068 LSSDTLSTIVEHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMF 1247
LS + +S +E G FS+P++T +Y R+ +IL++G IG KKF+FLAFSASQLR S WMF
Sbjct: 417 LSVNAISARIEQGFFSQPFKTGLYYRILSILKEGFIIGPKKFKFLAFSASQLREGSVWMF 476
Query: 1248 ASTGSETAESIRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITD 1427
AS S AE IR WMG F +I SVSKCAAR+GQLFSSS QT E+ +DV+ I D+EVIT+
Sbjct: 477 ASNDSLNAEGIRRWMGHFEEICSVSKCAARMGQLFSSSRQTVEVRPKDVEEIPDIEVITN 536
Query: 1428 GVKYCFSDGIGKISLAFARQVAQKCGLN--TTPSAFQIRYGGYKGVVAVDRTSFRKLSLR 1601
+KY FSDGIGK+S+ FA+++A + GL+ PSAF+IR+GGYKGV+AVD +S+R LSLR
Sbjct: 537 NMKYIFSDGIGKMSVRFAKEIAYRIGLDHKNPPSAFEIRFGGYKGVIAVDPSSYRNLSLR 596
Query: 1602 ASMRKFDSDVTMLNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLT 1781
SMRKF+SD MLN+T S+S PC++NREIISLLSTLGI+DE+FE M D + LDEMLT
Sbjct: 597 PSMRKFESDCRMLNITSWSKSQPCHVNREIISLLSTLGIRDEVFELMQQDDMCELDEMLT 656
Query: 1782 NRGIALSELNRMTGAEIRTAVKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVP 1961
N+ IALS L ++ AE +TA ML+ GY+P EP+L MIL+AH++ +L+DIRS+ +I VP
Sbjct: 657 NKEIALSVLGKIGSAETKTAADMLLQGYKPISEPYLLMILKAHQDNRLTDIRSKFKIHVP 716
Query: 1962 KGRVLLGCLDETGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKNPC 2141
KGRVLLGCLDETGIL YGQVYIR+T +E K+ ++ +F D T +KNPC
Sbjct: 717 KGRVLLGCLDETGILKYGQVYIRITKNNKEQKENEQPYFCKDDGKTVTLVGKVAVSKNPC 776
Query: 2142 LHPGDIRVLHAVYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIP 2321
LHPGD+RVL AV +L+L LVDCVVFPQ+GERPHPNECSGGDLDGDLYFV WD+ LIP
Sbjct: 777 LHPGDVRVLEAVCDLELHATKLVDCVVFPQRGERPHPNECSGGDLDGDLYFVTWDDRLIP 836
Query: 2322 LETDTPMDYVPRRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKARSP 2501
+ DTPMDY RPR+ DH V LEEIQ+ ++YM++D+LGAISNAHL++ADR+P KARSP
Sbjct: 837 EKADTPMDYTAARPRIMDHVVTLEEIQQHVVNYMLSDSLGAISNAHLIHADRDPMKARSP 896
Query: 2502 QCLQLAKLHSMAVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRATVD 2681
+CL+LA LHSMAVDFAKTGAPAE+PR+LRPRE+PDFMERWD+PMYISTGVLGKLYRA V
Sbjct: 897 ECLRLAALHSMAVDFAKTGAPAELPRSLRPREFPDFMERWDKPMYISTGVLGKLYRAAVS 956
Query: 2682 ETEKENPTATESGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEHED 2861
E + A++ S YD +LEV GFE FL A++ D Y ++L++LMNY GAEHED
Sbjct: 957 RMESSHALASQ--VQSSPTYDRELEVPGFEEFLEDADKHYDLYVEKLTTLMNYDGAEHED 1014
Query: 2862 EILTGNLRNKSIYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCY--EVELPKMASA 3035
E+LTGN+RN+ +YL++D+ +Y +MKDRI+ +V +L +EV GWF HSC E E ++ASA
Sbjct: 1015 EMLTGNIRNRLLYLRKDRKRYSDMKDRIVDSVNALHEEVRGWF-HSCLKAEEEASRVASA 1073
Query: 3036 WYHVTYHPNYY--STTNFLSFPWIVCDVLLNIKDSRKLKR*KVV 3161
WY VTYHP++ F SFPWI+CD LL IK+S+ +R ++V
Sbjct: 1074 WYRVTYHPDHRRPEKKQFWSFPWIICDKLLAIKESKSNRRRQLV 1117
Score = 202 bits (515), Expect(2) = 0.0
Identities = 104/283 (36%), Positives = 162/283 (57%)
Frame = +2
Query: 14 LATDGRLPDFLRTRLDIRPATDDIAPRATDPRXXXXXXXXXXXXXXXXXEMEEVERWESV 193
LA+ GRLP FL + L + PA D+ PRA +P E+E E V
Sbjct: 73 LASSGRLPRFLGSPLSVSPAPADLLPRAPEPSLRASGARLLVGNRVAERELEIAETLAGV 132
Query: 194 AAEIMPERKKLEFFVGHDGEQYKLEVNFADVLRSLGCRLSAGGEEGELNAVLLQLKYAPK 373
E++P +++++ ++ HD ++YKLEV F D+ C L +A+LLQL YAP+
Sbjct: 133 RVEVIPGKRRVDLYLTHDSQRYKLEVLFEDIRDCFRCSLDG------TSAILLQLTYAPR 186
Query: 374 IYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLELAEGLSVSE 553
I+ SGP + S+F DR H C+ED +F WVR +DF+ + S GK L ++L E +
Sbjct: 187 IHTAFSGPAVYSRFTDDRLHACKEDAKFTWVRALDFTPNQSFGKCSTLVIKLDEDAPMLH 246
Query: 554 ILTCLPYSQQLGDLALRKGESLCSSSQLVPIISYPESFTEKYEILFQLNSVLHMQKISCG 733
IL LP+S LG++A+ + + SS++VP++ P + YE+LF+LNS++H KI
Sbjct: 247 ILNGLPFSGVLGEMAISSMDVVGPSSKVVPLVDCPHGCSVSYEVLFRLNSLVHTGKIVAK 306
Query: 734 QVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQL 862
VN F L + + + K+ K KL++TCYEP++FI+++L
Sbjct: 307 HVNANLFTFLEQVPLHISRKIFEKMSKLESTCYEPLQFIESEL 349
>gb|EMT07612.1| hypothetical protein F775_11614 [Aegilops tauschii]
Length = 1160
Score = 927 bits (2395), Expect(2) = 0.0
Identities = 469/755 (62%), Positives = 568/755 (75%), Gaps = 6/755 (0%)
Frame = +3
Query: 888 LSNKSTQAGKLMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGK 1067
LS+K+ GKLM C+R+ +TPSR+Y GPE E +NYVVK+ + AS+F RV+FV+EDW K
Sbjct: 386 LSSKTEGKGKLMMCYRIHITPSRIYCLGPEEEVTNYVVKHHKKYASDFARVTFVDEDWSK 445
Query: 1068 LSSDTLSTIVEHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMF 1247
L D +S G FS+P +T +Y R+ +IL++G SIG KK+EFLAFSASQLR +S WMF
Sbjct: 446 LFPDAISARTGRGFFSQPLKTGLYYRILSILKEGFSIGPKKYEFLAFSASQLRGSSVWMF 505
Query: 1248 ASTGSETAESIRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITD 1427
AS S AE IR WMG F +I SVSKCAAR+GQLFSSS QT EI RDV+ I D+EV TD
Sbjct: 506 ASNDSLKAEDIRRWMGHFEEIRSVSKCAARMGQLFSSSRQTVEILPRDVEEIPDIEVTTD 565
Query: 1428 GVKYCFSDGIGKISLAFARQVAQKCGLN--TTPSAFQIRYGGYKGVVAVDRTSFRKLSLR 1601
G K+ FSDGIGKIS FA+ VA + GL+ PSAFQIRYGGYKGV+AVD SFR+LSLR
Sbjct: 566 GTKHIFSDGIGKISEKFAKDVAYEIGLDPMNPPSAFQIRYGGYKGVIAVDPDSFRRLSLR 625
Query: 1602 ASMRKFDSDVTMLNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLT 1781
SM+KF+S TM N+T S+ PCY+NREIISLLSTLGI+DEIFE M D +R LDEMLT
Sbjct: 626 PSMKKFESKSTMFNITSWSKPQPCYMNREIISLLSTLGIRDEIFELMQQDDMRELDEMLT 685
Query: 1782 NRGIALSELNRMTGAEIRTAVKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVP 1961
NR ALS L ++ E +TA KML+ GYEP+LEP+L MIL+AH++ +L+DIR+RC+I VP
Sbjct: 686 NREAALSVLGKIGSTETKTASKMLLQGYEPSLEPYLLMILKAHQDNRLTDIRTRCKIHVP 745
Query: 1962 KGRVLLGCLDETGILNYGQVYIRVTLTEEELKDKDETFFK--NFDQTTAXXXXXXXXTKN 2135
KGRVL+GCLDETG L YGQVYIR+T +E KD + +F N TA +KN
Sbjct: 746 KGRVLIGCLDETGELKYGQVYIRITKNSKEQKDNGQPYFSKDNRKDKTAVVVGKVAISKN 805
Query: 2136 PCLHPGDIRVLHAVYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENL 2315
PCLHPGDIRVL AVY+ L LVDCVVFPQ+GERPHPNECSGGDLDGDLYF+ WDE L
Sbjct: 806 PCLHPGDIRVLEAVYDHGLYANNLVDCVVFPQRGERPHPNECSGGDLDGDLYFITWDEKL 865
Query: 2316 IPLETDTPMDYVPRRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKAR 2495
IP + D+PMDY RPR+ DH V LEEIQK+F+DYMIND+LGAIS AHLV+ADR P KAR
Sbjct: 866 IPEKVDSPMDYTAARPRIMDHVVTLEEIQKYFVDYMINDSLGAISTAHLVHADRHPMKAR 925
Query: 2496 SPQCLQLAKLHSMAVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRAT 2675
SP+CLQLA LHSMAVDFAK+GAPAEMPR+LRPREYPDFMERWD+PMYIS G LGKLYRA
Sbjct: 926 SPECLQLAALHSMAVDFAKSGAPAEMPRSLRPREYPDFMERWDKPMYISNGALGKLYRAA 985
Query: 2676 VDETEKENPTATESGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEH 2855
+ + +P + + P ++D DLEV GFE FL AEE D Y ++L++LM +YGAE
Sbjct: 986 ASQMQ-SSPAPSFAQP--NPVFDPDLEVPGFEEFLESAEECYDLYVEKLTALMGHYGAEQ 1042
Query: 2856 EDEILTGNLRNKSIYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCYEVELPKMASA 3035
EDEILTGN+RN+ +YL++D +Y EMKDRI+ +V L KE GWF S + E + ASA
Sbjct: 1043 EDEILTGNIRNRLLYLKKDNKRYFEMKDRIIDSVEGLHKEARGWFT-SRPKAEASRRASA 1101
Query: 3036 WYHVTYHPNYYSTTN--FLSFPWIVCDVLLNIKDS 3134
WY VTYHP++ F SFPWI+CD LL I++S
Sbjct: 1102 WYRVTYHPDHRRREKKWFWSFPWIICDELLKIEES 1136
Score = 205 bits (521), Expect(2) = 0.0
Identities = 106/291 (36%), Positives = 164/291 (56%)
Frame = +2
Query: 14 LATDGRLPDFLRTRLDIRPATDDIAPRATDPRXXXXXXXXXXXXXXXXXEMEEVERWESV 193
LA+ GRLP FL + L + PA D+ PRA D E E + W+SV
Sbjct: 103 LASSGRLPRFLGSLLSVSPAPADLLPRAPDHSLRTADARLLVGNRIAEREFEAADSWDSV 162
Query: 194 AAEIMPERKKLEFFVGHDGEQYKLEVNFADVLRSLGCRLSAGGEEGELNAVLLQLKYAPK 373
E++P +++++ ++ HD ++Y+LE D+ C G A+LL+L YAP+
Sbjct: 163 RVEVIPGKRRIDLYLDHDSQRYRLE----DIRNCYKCSFDGAG------AILLKLMYAPR 212
Query: 374 IYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLELAEGLSVSE 553
I +ISGP + S+F DR+H C+ED++F WVR +DF+ + S GK L L L EG V
Sbjct: 213 ICTKISGPAVYSRFSDDRFHACKEDVKFTWVRALDFTPNHSFGKCSTLALVLDEGAPVPF 272
Query: 554 ILTCLPYSQQLGDLALRKGESLCSSSQLVPIISYPESFTEKYEILFQLNSVLHMQKISCG 733
IL LP S +LG+L + E + SS++VP++ P + YE+LF++NS++HM KI
Sbjct: 273 ILNSLPLSGELGELVISLMEFVGPSSKVVPLVDCPTGCSVSYEVLFRVNSLVHMGKIIAK 332
Query: 734 QVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQLANMRKQKN 886
VN F L + V + ++ K KL+ TCYEP+ FI+ ++ + ++ N
Sbjct: 333 HVNAGLFKALEEIPVHISRRIFEKMSKLEFTCYEPLEFIQKEVHSRKRSHN 383
>ref|XP_006653498.1| PREDICTED: probable RNA-dependent RNA polymerase 2-like [Oryza
brachyantha]
Length = 1055
Score = 925 bits (2390), Expect(2) = 0.0
Identities = 464/734 (63%), Positives = 559/734 (76%), Gaps = 9/734 (1%)
Frame = +3
Query: 888 LSNKSTQAGKLMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGK 1067
LS++ KLM C+RV +TPS+++ GPE E +NYVVK+ S AS+F+RV+FV+EDW K
Sbjct: 310 LSSEGESERKLMRCYRVHITPSKIFCLGPEQEVTNYVVKHHSAYASDFVRVTFVDEDWSK 369
Query: 1068 LSSDTLSTIVEHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMF 1247
LS++ +S E G FSKP RT +Y R+ +IL G +IG K FEFLAFSASQLR NS WMF
Sbjct: 370 LSTNAISARTEEGFFSKPIRTGLYYRILSILNKGFTIGPKNFEFLAFSASQLRGNSVWMF 429
Query: 1248 ASTGSETAESIRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITD 1427
AS S AE IR WMG F I SVSKCAAR+GQLFSSS QTFE+ D++VI D+E+ TD
Sbjct: 430 ASNASLNAEGIRRWMGHFKNIRSVSKCAARMGQLFSSSRQTFEVAQWDMEVIPDIEITTD 489
Query: 1428 GVKYCFSDGIGKISLAFARQVAQKCGLNTT--PSAFQIRYGGYKGVVAVDRTSFRKLSLR 1601
G KY FSDGIGKISL FARQVA GL+ + PSAFQIRYGGYKGV+AVD S LSLR
Sbjct: 490 GSKYIFSDGIGKISLRFARQVAHHIGLDPSNPPSAFQIRYGGYKGVIAVDPMSSFDLSLR 549
Query: 1602 ASMRKFDSDVTMLNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLT 1781
SM+KF+S+ MLN+T S+S PCY+NREIISLLSTLGI D+IF +M D++R DEMLT
Sbjct: 550 PSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGISDDIFVAMQQDEMRETDEMLT 609
Query: 1782 NRGIALSELNRMTGAEIRTAVKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVP 1961
+ +ALS L ++ G+E +TAVKML+ GYEP+ EP+LSMIL+AH+E +L DIR+RC+I VP
Sbjct: 610 KKEVALSVLGKLGGSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLIDIRTRCKIHVP 669
Query: 1962 KGRVLLGCLDETGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKNPC 2141
KGRVL+GCLDETG+L YGQVYIR+T +E KD D+++F N D TA TKNPC
Sbjct: 670 KGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSDQSYFYNDDGKTATIVGKVAITKNPC 729
Query: 2142 LHPGDIRVLHAVYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIP 2321
LHPGD+RVL AVY+ +L+ MGLVDC+VFPQ+GERPHPNECSGGDLDGDLYF+ WD+ LIP
Sbjct: 730 LHPGDVRVLEAVYDPELEVMGLVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIP 789
Query: 2322 LETDTPMDYVPRRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKARSP 2501
+ DTPMDY RPR+ DH V LEEIQK F+DYMIND+LG IS AHL++ADR P KARSP
Sbjct: 790 EKVDTPMDYTATRPRIMDHAVTLEEIQKHFVDYMINDSLGVISTAHLIHADRAPLKARSP 849
Query: 2502 QCLQLAKLHSMAVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRATVD 2681
+CLQLA LHSMAVDFAKTGAPAEMPR LRPREYPDFMERW++P YIS GVLGKLYR+
Sbjct: 850 ECLQLATLHSMAVDFAKTGAPAEMPRALRPREYPDFMERWEKPTYISHGVLGKLYRSAAG 909
Query: 2682 ETEKENP--TATESGP---LSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYG 2846
E+++P A S P + YD DLEV G + FL AEE Y ++LS+LM+YY
Sbjct: 910 HMEEKSPGGAAPSSSPAQAIPTYEYDPDLEVPGSDQFLDAAEEHYQLYEEKLSTLMSYYR 969
Query: 2847 AEHEDEILTGNLRNKSIYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCYEVE--LP 3020
AE EDEILTGN+RNK +YL+RD +Y EMKDRI+ AV LQ+E GW S E E P
Sbjct: 970 AEREDEILTGNIRNKQLYLRRDNKRYFEMKDRIVAAVDGLQREARGWLLSSKGEEEGDGP 1029
Query: 3021 KMASAWYHVTYHPN 3062
+MASAWY VTYHP+
Sbjct: 1030 RMASAWYRVTYHPD 1043
Score = 206 bits (523), Expect(2) = 0.0
Identities = 102/271 (37%), Positives = 161/271 (59%)
Frame = +2
Query: 71 ATDDIAPRATDPRXXXXXXXXXXXXXXXXXEMEEVERWESVAAEIMPERKKLEFFVGHDG 250
A + + PRA+D E + W+ V AE++P +++++ ++ HD
Sbjct: 42 ACEILLPRASDLSLRAAGARLVVGDRVAKRVFEAADAWDGVRAEVIPAKRRVDLYLEHDS 101
Query: 251 EQYKLEVNFADVLRSLGCRLSAGGEEGELNAVLLQLKYAPKIYRRISGPTLNSKFRVDRY 430
++YKLEV F D+ LGC L G A+LLQL YAP+I+ ISGP ++S+F DR+
Sbjct: 102 QRYKLEVLFEDMKDCLGCTLDGMG------AILLQLNYAPRIHCAISGPAVSSRFMDDRF 155
Query: 431 HICREDLRFLWVRTVDFSTSCSIGKSCYLCLELAEGLSVSEILTCLPYSQQLGDLALRKG 610
H C+ED +F WVR +DF+ + S GK L L+L E VS+IL LP+S LG L +
Sbjct: 156 HACKEDAKFSWVRALDFTPNYSFGKCFTLVLKLGESALVSDILKSLPFSGDLGVLTMNSA 215
Query: 611 ESLCSSSQLVPIISYPESFTEKYEILFQLNSVLHMQKISCGQVNTEFFDILNSLSVETAM 790
+ + +SS +VP++ P ++ YE+LF+LNS++HM KI VN + F L L V+ +
Sbjct: 216 DGVGASSHVVPLVHCPMDYSVPYEVLFRLNSLIHMGKIVAKHVNADMFKTLQDLPVDVSR 275
Query: 791 KLLRKFHKLKTTCYEPVRFIKNQLANMRKQK 883
++ K KL++TCYEP++FI + +M++ +
Sbjct: 276 RIFEKMTKLESTCYEPLQFILQEAYSMKRSR 306
>ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum]
gi|557097970|gb|ESQ38406.1| hypothetical protein
EUTSA_v10028370mg [Eutrema salsugineum]
Length = 1124
Score = 924 bits (2387), Expect(2) = 0.0
Identities = 454/740 (61%), Positives = 563/740 (76%), Gaps = 3/740 (0%)
Frame = +3
Query: 918 LMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGKLSSDTLSTIV 1097
+MSC R VTPS++Y GPELET+NYVVK F+E AS+F+RV+FVEEDW KL ++ LS
Sbjct: 376 IMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHASDFMRVTFVEEDWSKLPANALSVNS 435
Query: 1098 EHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMFASTGSETAES 1277
+ G F KP+RT IY RV TIL +GI++G K+FEFLAFSASQLR NS WMFAS AE+
Sbjct: 436 KEGYFLKPFRTKIYHRVLTILGEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKVKAEN 495
Query: 1278 IRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITDGVKYCFSDGI 1457
+R WMG F KI S+SKCAAR+GQLFS+S QT + +DV+ I D+EV TDG YCFSDGI
Sbjct: 496 VREWMGCFRKIRSISKCAARMGQLFSASRQTLTVRPQDVEQIPDIEVTTDGADYCFSDGI 555
Query: 1458 GKISLAFARQVAQKCGLNTTPSAFQIRYGGYKGVVAVDRTSFRKLSLRASMRKFDSDVTM 1637
GKISLAFA+QVAQKCGL+ PSAFQIR+GGYKGV+AVDR+SFRKLSLR SM KF+S+ M
Sbjct: 556 GKISLAFAKQVAQKCGLSHIPSAFQIRFGGYKGVIAVDRSSFRKLSLRDSMLKFESNNRM 615
Query: 1638 LNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLTNRGIALSELNRM 1817
LNVT+ +ES+PC+LNREII LLSTLGI+D +FE+M + L ML +R AL+ L ++
Sbjct: 616 LNVTRWTESMPCFLNREIICLLSTLGIEDAVFEAMQRGHLSMLGNMLEDRDAALNVLQKL 675
Query: 1818 TGAEIRTA-VKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVPKGRVLLGCLDE 1994
+G + VKML+ GY P+ EP+L M+LR H E QLS+++SRCRI VPKGR+L+GC+DE
Sbjct: 676 SGEGSKNLLVKMLLLGYAPSSEPYLLMMLRVHHESQLSELKSRCRILVPKGRILIGCMDE 735
Query: 1995 TGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKNPCLHPGDIRVLHA 2174
GIL YGQVY+RVTLT+ EL+ +++ +F D+ T+ TKNPCLHPGDIRVL A
Sbjct: 736 MGILEYGQVYVRVTLTKAELESREQGYFHKIDEETSVVIGKVVVTKNPCLHPGDIRVLDA 795
Query: 2175 VYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPLETDTPMDYVP 2354
+YE+ + G +DC+VFPQKGERPHPNECSGGDLDGD +FV WDE LIP + D PMDY
Sbjct: 796 IYEISFEQKGFLDCIVFPQKGERPHPNECSGGDLDGDQFFVSWDEKLIPSQMDPPMDYAG 855
Query: 2355 RRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKARSPQCLQLAKLHSM 2534
RPR+ DH+V LEEI KFF+DYMI+D LG IS AHL++ADR+P KARS +CL+LA LHS
Sbjct: 856 SRPRIMDHDVTLEEIHKFFVDYMISDTLGVISTAHLIHADRDPEKARSQKCLELANLHSR 915
Query: 2535 AVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRATVDETEKENPTATE 2714
AVDFAKTGAPAEMP L+PRE+PDF+ER+++PMYIS V GKLYRA + P E
Sbjct: 916 AVDFAKTGAPAEMPYALKPREFPDFLERFEKPMYISESVFGKLYRAVKRSLAQRKPEEAE 975
Query: 2715 SGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEHEDEILTGNLRNKS 2894
S YD LE GFE+F+ A+ RD Y+++LSSLMNYYGA +E+EILTG LR K
Sbjct: 976 SE--VTMAYDSTLEEAGFESFIETAKAHRDMYAEKLSSLMNYYGAANEEEILTGILRTKE 1033
Query: 2895 IYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSC-YEVELPKMASAWYHVTYHPNYY- 3068
+YLQRD +YG+MKDRI ++V+ LQ+E GWF SC E + K+ASAWY+VTY+P++
Sbjct: 1034 MYLQRDNRRYGDMKDRITLSVKDLQREAMGWFDKSCKEEQQRKKLASAWYYVTYNPSHRD 1093
Query: 3069 STTNFLSFPWIVCDVLLNIK 3128
FLSFPWIV DVLL IK
Sbjct: 1094 EKPKFLSFPWIVGDVLLGIK 1113
Score = 198 bits (504), Expect(2) = 0.0
Identities = 113/295 (38%), Positives = 171/295 (57%), Gaps = 8/295 (2%)
Frame = +2
Query: 2 RACCLATDGRLPDFLRTRLDIRPATDDIAPRATDPRXXXXXXXXXXXXXXXXXEMEE--- 172
RA L++ +L F L I A DDI PR DPR E +E
Sbjct: 67 RAHLLSSQSKLL-FKSRNLRISEAYDDIIPRPVDPRKMLDGVVLTVGFP----EADEGRF 121
Query: 173 --VERWESVAAEIMPERKKLEFFVGHDGEQYKLEVNFADVLRSLGCRLSAGGEEGELNAV 346
+E+WE V ++ E++++EF+V GE YKLEV F D++ ++GC + E +NA
Sbjct: 122 CALEKWEGVRCWVIEEKRRVEFWVCDGGECYKLEVRFEDIVETVGCCFNGASE---INAF 178
Query: 347 LLQLKYAPKIYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLE 526
L+LKY PKIY+++SGP + +KF+ DRY C+ED F+W+R+ DFS SIG S CLE
Sbjct: 179 FLRLKYGPKIYKKVSGPHIATKFKSDRYRFCKEDFDFMWIRSTDFSGLKSIGTSNCFCLE 238
Query: 527 LAEGLSVSEILTCLPY-SQQLGDLALRKGESLCSSSQLVPII-SYPESFTEKYEILFQLN 700
+ G + +I + PY + L G++ S++Q+VP++ ++ YEILFQLN
Sbjct: 239 VNNGSTTLDIFSSFPYFREDTLSLTSVDGKTFASANQIVPLLNTFDLGLEPPYEILFQLN 298
Query: 701 SVLHMQKISC-GQVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQL 862
S++H QKI+ N E ++L LS+ETA+ +L+K H+ + CY+P+ F+K QL
Sbjct: 299 SLVHAQKITLFAASNMELINVLRGLSLETALVILKKLHQQSSMCYDPLSFVKAQL 353
>ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297318388|gb|EFH48810.1| RNA-dependent RNA polymerase
2 [Arabidopsis lyrata subsp. lyrata]
Length = 1134
Score = 920 bits (2379), Expect(2) = 0.0
Identities = 450/740 (60%), Positives = 565/740 (76%), Gaps = 3/740 (0%)
Frame = +3
Query: 918 LMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGKLSSDTLSTIV 1097
+MSC R VTPS++Y GPELET+NYVVK F+E S+F+RV+FVEEDW KL ++ L+
Sbjct: 379 IMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSKLPANALTVNS 438
Query: 1098 EHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMFASTGSETAES 1277
+ G F KP+RT+IY RV +IL +GI++G K+FEFLAFSASQLR NS WMFAS AE
Sbjct: 439 KEGYFVKPFRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKIKAED 498
Query: 1278 IRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITDGVKYCFSDGI 1457
IR WMG F KI S+SKCAAR+GQLFS+S QT + ++DV+ I D+EV TDG YCFSDGI
Sbjct: 499 IREWMGCFRKIRSISKCAARMGQLFSASRQTLNVRAQDVEQIPDIEVTTDGADYCFSDGI 558
Query: 1458 GKISLAFARQVAQKCGLNTTPSAFQIRYGGYKGVVAVDRTSFRKLSLRASMRKFDSDVTM 1637
GKISLAFA+QVAQKCGL+ PSAFQIRYGGYKGV+AVDR+SFRK+SLR SM KFDS+ M
Sbjct: 559 GKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFRKMSLRDSMLKFDSNNRM 618
Query: 1638 LNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLTNRGIALSELNRM 1817
LNVT+ +ES+PC+LNREII LLSTLGI+D +FE+M + L ML +R AL+ L ++
Sbjct: 619 LNVTRWTESMPCFLNREIICLLSTLGIEDAVFEAMQAVHLSMLGNMLEDRDAALNVLQKL 678
Query: 1818 TGAEIRTA-VKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVPKGRVLLGCLDE 1994
+G + VKML+ GY P+ EP+LSM+LR H E QLS+++SRCRI VPKGR+L+GC+DE
Sbjct: 679 SGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPKGRILIGCMDE 738
Query: 1995 TGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKNPCLHPGDIRVLHA 2174
GIL YGQV++RVTLT+ ELK +++++F D+ T+ TKNPCLHPGDIRVL A
Sbjct: 739 MGILEYGQVFVRVTLTKAELKSREQSYFHKIDEETSVVIGKVVVTKNPCLHPGDIRVLDA 798
Query: 2175 VYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPLETDTPMDYVP 2354
+YE+ ++ G +DC++FPQKGERPHPNECSGGDLDGD +FV WDE LIP + D PMDY
Sbjct: 799 IYEVNFEEKGFLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKLIPSQMDPPMDYAG 858
Query: 2355 RRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKARSPQCLQLAKLHSM 2534
RPR+ DH+V LEEI KFF+DYMI+D LG IS AHLV+ADR+P KARS +CL+LA LHS
Sbjct: 859 SRPRIMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQKCLELANLHSR 918
Query: 2535 AVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRATVDETEKENPTATE 2714
AVDFAKTGAPAEMP L+PRE+PDF+ER+++P YIS V GKLYRA + P A
Sbjct: 919 AVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVRSSLAQRKPEAES 978
Query: 2715 SGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEHEDEILTGNLRNKS 2894
G L+ YD LE GFE+F+ A+ RD Y+++L+SLM YYGA +E+EILTG L+ K
Sbjct: 979 DGTLT---YDATLEEAGFESFIETAKAHRDMYAEKLTSLMIYYGAVNEEEILTGILKTKE 1035
Query: 2895 IYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCY-EVELPKMASAWYHVTYHPNYY- 3068
+YL RD +YG+MKDRI ++V+ L KE GWF SC E + K+ASAWY+VTY+P++
Sbjct: 1036 MYLARDNRRYGDMKDRITLSVKDLHKEAMGWFDKSCEDEQQKKKLASAWYYVTYNPSHRD 1095
Query: 3069 STTNFLSFPWIVCDVLLNIK 3128
FLSFPWIV DVLL+IK
Sbjct: 1096 EKLTFLSFPWIVGDVLLDIK 1115
Score = 201 bits (511), Expect(2) = 0.0
Identities = 116/306 (37%), Positives = 179/306 (58%), Gaps = 4/306 (1%)
Frame = +2
Query: 2 RACCLATDGRLPDFLRTRLDIRPATDDIAPRATDPRXXXXXXXXXXXXXXXXXEME-EVE 178
RA L++ +L F L + A DDI PR DPR + +E
Sbjct: 69 RAQLLSSQSKLL-FKTHNLRLSEAYDDIIPRPVDPRRRLDDIVLTVGFPESDEKRFCALE 127
Query: 179 RWESVAAEIMPERKKLEFFVGHDGEQYKLEVNFADVLRSLGCRLSAGGEEGELNAVLLQL 358
+W+ V I+ E+++LEF+V +GE YK+EV F D++ +L C ++ G+ E NA LL+L
Sbjct: 128 KWDGVRCWILEEKRRLEFWVWENGECYKIEVRFEDIVETLCCCVN--GDASETNAFLLKL 185
Query: 359 KYAPKIYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLELAEG 538
KY PK+++R+SGP + +KF+ DRY C+ED F+W+RT DFS SIG S CLE+ G
Sbjct: 186 KYGPKVFKRVSGPHIATKFKSDRYQFCKEDFDFMWIRTTDFSGLKSIGTSTCFCLEVHNG 245
Query: 539 LSVSEILTCLP-YSQQLGDLALRKGESLCSSSQLVPIISYPESFTE-KYEILFQLNSVLH 712
++ ++ + LP Y ++ L G++ S SQ+VP+++ E YEILFQLN+++H
Sbjct: 246 STMLDVFSGLPYYREETLSLTFVDGKNFASVSQIVPLLNAAILGLEFPYEILFQLNALVH 305
Query: 713 MQKISC-GQVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQLANMRKQKNF 889
QKIS N E +I LS+ET + +L+K H+ + CY+P+ F+K Q+ ++ K
Sbjct: 306 AQKISLFAASNMELINIFRGLSLETTLVILKKLHQQSSICYDPLFFVKTQMQSVVK---- 361
Query: 890 VQQKHS 907
+ KHS
Sbjct: 362 -KMKHS 366
>ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis thaliana]
gi|75318859|sp|O82504.1|RDR2_ARATH RecName:
Full=RNA-dependent RNA polymerase 2; Short=AtRDRP2;
AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 1;
AltName: Full=RNA-directed RNA polymerase 2
gi|3600048|gb|AAC35535.1| similar to hypothetical
proteins in Schizosaccharomyces pombe (GB:Z98533) and C.
elegans (GB:Z48334 and Z78419) [Arabidopsis thaliana]
gi|4850292|emb|CAB43048.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|7267812|emb|CAB81214.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|332657576|gb|AEE82976.1| RNA-dependent RNA polymerase
2 [Arabidopsis thaliana]
Length = 1133
Score = 924 bits (2387), Expect(2) = 0.0
Identities = 454/740 (61%), Positives = 564/740 (76%), Gaps = 3/740 (0%)
Frame = +3
Query: 918 LMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGKLSSDTLSTIV 1097
+MSC R VTPS++Y GPELET+NYVVK F+E S+F+RV+FVEEDW KL ++ LS
Sbjct: 378 IMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSKLPANALSVNS 437
Query: 1098 EHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMFASTGSETAES 1277
+ G F KP RT+IY RV +IL +GI++G K+FEFLAFSASQLR NS WMFAS AE
Sbjct: 438 KEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKVKAED 497
Query: 1278 IRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITDGVKYCFSDGI 1457
IR WMG F KI S+SKCAAR+GQLFS+S QT + ++DV+ I D+EV TDG YCFSDGI
Sbjct: 498 IREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTTDGADYCFSDGI 557
Query: 1458 GKISLAFARQVAQKCGLNTTPSAFQIRYGGYKGVVAVDRTSFRKLSLRASMRKFDSDVTM 1637
GKISLAFA+QVAQKCGL+ PSAFQIRYGGYKGV+AVDR+SFRKLSLR SM KFDS+ M
Sbjct: 558 GKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRDSMLKFDSNNRM 617
Query: 1638 LNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLTNRGIALSELNRM 1817
LNVT+ +ES+PC+LNREII LLSTLGI+D +FE+M + L ML +R AL+ L ++
Sbjct: 618 LNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDRDAALNVLQKL 677
Query: 1818 TGAEIRTA-VKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVPKGRVLLGCLDE 1994
+G + VKML+ GY P+ EP+LSM+LR H E QLS+++SRCRI VPKGR+L+GC+DE
Sbjct: 678 SGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPKGRILIGCMDE 737
Query: 1995 TGILNYGQVYIRVTLTEEELKDKDETFFKNFDQTTAXXXXXXXXTKNPCLHPGDIRVLHA 2174
GIL YGQVY+RVTLT+ ELK +D+++F+ D+ T+ TKNPCLHPGDIRVL A
Sbjct: 738 MGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPCLHPGDIRVLDA 797
Query: 2175 VYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENLIPLETDTPMDYVP 2354
+YE+ ++ G +DC++FPQKGERPHPNECSGGDLDGD +FV WDE +IP E D PMDY
Sbjct: 798 IYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIPSEMDPPMDYAG 857
Query: 2355 RRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKARSPQCLQLAKLHSM 2534
RPRL DH+V LEEI KFF+DYMI+D LG IS AHLV+ADR+P KARS +CL+LA LHS
Sbjct: 858 SRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQKCLELANLHSR 917
Query: 2535 AVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRATVDETEKENPTATE 2714
AVDFAKTGAPAEMP L+PRE+PDF+ER+++P YIS V GKLYRA + P A
Sbjct: 918 AVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVKSSLAQRKPEAES 977
Query: 2715 SGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEHEDEILTGNLRNKS 2894
++ YD LE GFE+F+ A+ RD Y ++L+SLM YYGA +E+EILTG L+ K
Sbjct: 978 EDTVA---YDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEEILTGILKTKE 1034
Query: 2895 IYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCY-EVELPKMASAWYHVTYHPNYY- 3068
+YL RD +YG+MKDRI ++V+ L KE GWF+ SC E + K+ASAWY+VTY+PN+
Sbjct: 1035 MYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCEDEQQKKKLASAWYYVTYNPNHRD 1094
Query: 3069 STTNFLSFPWIVCDVLLNIK 3128
FLSFPWIV DVLL+IK
Sbjct: 1095 EKLTFLSFPWIVGDVLLDIK 1114
Score = 190 bits (482), Expect(2) = 0.0
Identities = 112/306 (36%), Positives = 179/306 (58%), Gaps = 4/306 (1%)
Frame = +2
Query: 2 RACCLATDGRLPDFLRTRLDIRPATDDIAPRATDPRXXXXXXXXXXXXXXXXXEME-EVE 178
RA L++ +L F L + A DDI PR DPR + +E
Sbjct: 69 RAQLLSSQSKLL-FKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALE 127
Query: 179 RWESVAAEIMPERKKLEFFVGHDGEQYKLEVNFADVLRSLGCRLSAGGEEGELNAVLLQL 358
+W+ V I+ E++++EF+V G+ YK+EV F D++ +L C ++ G+ E++A LL+L
Sbjct: 128 KWDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVN--GDASEIDAFLLKL 185
Query: 359 KYAPKIYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLELAEG 538
KY PK+++R++ + +KF+ DRY C+ED F+W+RT DFS S SIG S CLE+ G
Sbjct: 186 KYGPKVFKRVT-VHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNG 244
Query: 539 LSVSEILTCLP-YSQQLGDLALRKGESLCSSSQLVPIISYPESFTE-KYEILFQLNSVLH 712
++ +I + LP Y + L G++ S++Q+VP+++ E YEILFQLN+++H
Sbjct: 245 STMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVH 304
Query: 713 MQKISC-GQVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQLANMRKQKNF 889
QKIS + E IL +S+ETA+ +L+K H+ + CY+PV F+K Q+ ++ K
Sbjct: 305 AQKISLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVK---- 360
Query: 890 VQQKHS 907
+ KHS
Sbjct: 361 -KMKHS 365
>gb|EMS53588.1| putative RNA-dependent RNA polymerase 2 [Triticum urartu]
Length = 1089
Score = 938 bits (2425), Expect(2) = 0.0
Identities = 476/763 (62%), Positives = 574/763 (75%), Gaps = 6/763 (0%)
Frame = +3
Query: 888 LSNKSTQAGKLMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGK 1067
LS+K+ GKLM C+R+ +TPS++Y GPE E SNYVVK+ + AS+F RV+FV+EDW K
Sbjct: 325 LSSKTEGEGKLMMCYRIHITPSKIYCLGPEEEVSNYVVKHHKQYASDFARVTFVDEDWSK 384
Query: 1068 LSSDTLSTIVEHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMF 1247
L D +S G FS P +T +Y R+ +IL++G SIG KK+EFLAFSASQLR +S WMF
Sbjct: 385 LFPDAISARTGRGFFSHPLKTGLYHRILSILKEGFSIGPKKYEFLAFSASQLRGSSVWMF 444
Query: 1248 ASTGSETAESIRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITD 1427
AS S AE I WMG F I SVSKCAAR+GQLFSSS QT EI RDV+ I D+EVITD
Sbjct: 445 ASNDSLKAEDISRWMGNFEDIRSVSKCAARMGQLFSSSRQTLEILPRDVEEIPDIEVITD 504
Query: 1428 GVKYCFSDGIGKISLAFARQVAQKCGLNTT--PSAFQIRYGGYKGVVAVDRTSFRKLSLR 1601
G KY FSDGIGKIS A+++A + GL+ T PSAFQIRYGGYKGVVAVD SFR LSLR
Sbjct: 505 GSKYIFSDGIGKISERLAKEMACRIGLDYTNPPSAFQIRYGGYKGVVAVDPDSFRNLSLR 564
Query: 1602 ASMRKFDSDVTMLNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLT 1781
SM+KF+S M N+T +S+S PCY+NRE+ISLLSTLGI+DEIFESM + +R LDEMLT
Sbjct: 565 PSMKKFESKSRMFNITSTSKSQPCYMNREVISLLSTLGIRDEIFESMQQNDMRELDEMLT 624
Query: 1782 NRGIALSELNRMTGAEIRTAVKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVP 1961
NR ALS L ++ AE +TA K+L+ GYEP+LEP+L MIL+AH++ +L+DIR+RC+I VP
Sbjct: 625 NREAALSVLGKIGSAETKTASKILLQGYEPSLEPYLLMILKAHQDNRLTDIRTRCKIHVP 684
Query: 1962 KGRVLLGCLDETGILNYGQVYIRVTLTEEELKDKDETFFK--NFDQTTAXXXXXXXXTKN 2135
KGRVL+GCLDETG L YGQVYIR+T +E KD + +F N + TA +KN
Sbjct: 685 KGRVLIGCLDETGELEYGQVYIRITKNSKEQKDNCQPYFAEDNGKEKTAVVVGKVAVSKN 744
Query: 2136 PCLHPGDIRVLHAVYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENL 2315
PCLHPGDIRVL AVY+ L LVDCVVFPQ+GERPHPNECSGGDLDGDLYF+ WDE L
Sbjct: 745 PCLHPGDIRVLEAVYDHGLYAKNLVDCVVFPQRGERPHPNECSGGDLDGDLYFITWDEKL 804
Query: 2316 IPLETDTPMDYVPRRPRLTDHEVNLEEIQKFFLDYMINDNLGAISNAHLVYADREPSKAR 2495
IP + D+PMDY RPR+ DH V LEEIQK+F+DYMIND+LGAIS AHLV+ADR P KAR
Sbjct: 805 IPEKVDSPMDYTAARPRIMDHVVTLEEIQKYFVDYMINDSLGAISTAHLVHADRHPMKAR 864
Query: 2496 SPQCLQLAKLHSMAVDFAKTGAPAEMPRNLRPREYPDFMERWDRPMYISTGVLGKLYRAT 2675
SP+CLQLA LHSMAVDFAKTGAPAEMPR+LR +EYPDFMERWD+P YIS G LGKLYRA
Sbjct: 865 SPECLQLAALHSMAVDFAKTGAPAEMPRSLRAKEYPDFMERWDKPTYISNGALGKLYRAA 924
Query: 2676 VDETEKENPTATESGPLSRSIYDYDLEVEGFEAFLGYAEEFRDQYSDRLSSLMNYYGAEH 2855
+ ++ A S S +D DLEV G E FL AEEF D Y+++LS+LM+YYGAEH
Sbjct: 925 A--SRMQSAPAPSSSAQSSPAFDPDLEVPGLEEFLASAEEFYDLYAEKLSTLMSYYGAEH 982
Query: 2856 EDEILTGNLRNKSIYLQRDKNKYGEMKDRILIAVRSLQKEVDGWFKHSCYEVELPKMASA 3035
EDEILTGN+RN+ +YL++D +Y EMKDRI+ +V L KEV GWF+ S + E + ASA
Sbjct: 983 EDEILTGNIRNRLLYLKKDNKRYFEMKDRIIDSVEGLHKEVQGWFR-SRPKAEASRWASA 1041
Query: 3036 WYHVTYHPNYY--STTNFLSFPWIVCDVLLNIKDSRKLKR*KV 3158
WY VTYHP + F SFPWIVCD LL IK+S +R +V
Sbjct: 1042 WYRVTYHPEHRRPGKKQFWSFPWIVCDELLKIKESSMRRRQQV 1084
Score = 168 bits (425), Expect(2) = 0.0
Identities = 97/268 (36%), Positives = 143/268 (53%), Gaps = 36/268 (13%)
Frame = +2
Query: 191 VAAEIMPERKKLEFFVGHDGEQYKLEVNFADVLRSLGCRLSAGG-------EEGE----- 334
V E++P +++++ ++ HD ++Y+LEV F D+ L C G EG
Sbjct: 55 VRVEVIPGKRRIDLYLNHDSQRYRLEVYFEDIRNCLQCSFDGAGVILLQDLSEGVTPLKI 114
Query: 335 -----------------------LNAVLLQ-LKYAPKIYRRISGPTLNSKFRVDRYHICR 442
LN LQ L YAP+I ISGP + S+F DR+H C+
Sbjct: 115 RLFLSVQIDHAAVVNTSMITVLVLNVQRLQQLMYAPRICTTISGPAVYSRFSDDRFHACK 174
Query: 443 EDLRFLWVRTVDFSTSCSIGKSCYLCLELAEGLSVSEILTCLPYSQQLGDLALRKGESLC 622
ED +F WVR +DF+ + S GK L L L EG VS IL LP S +LG+L + E
Sbjct: 175 EDAKFTWVRALDFTRNHSFGKCSTLALVLDEGAPVSFILNSLPMSGELGELVISSMEFFG 234
Query: 623 SSSQLVPIISYPESFTEKYEILFQLNSVLHMQKISCGQVNTEFFDILNSLSVETAMKLLR 802
SS++VP++ P + YE+LF+LNS++HM KI VN + F L + V + ++
Sbjct: 235 PSSKVVPLVDCPSGCSVSYEVLFRLNSLVHMGKIVSKDVNADLFKALEEIPVHISRRIFE 294
Query: 803 KFHKLKTTCYEPVRFIKNQLANMRKQKN 886
K +KL TCYEP++FI+ Q A+ RK+ +
Sbjct: 295 KMNKLDFTCYEPLQFIQ-QEAHSRKRSH 321
>gb|EMT21060.1| hypothetical protein F775_12206 [Aegilops tauschii]
Length = 1246
Score = 928 bits (2398), Expect(2) = 0.0
Identities = 478/781 (61%), Positives = 573/781 (73%), Gaps = 30/781 (3%)
Frame = +3
Query: 888 LSNKSTQAGKLMSCHRVLVTPSRVYFRGPELETSNYVVKYFSESASNFLRVSFVEEDWGK 1067
LS+K+ GKLM C+R+ +TPS++Y GPE E SNYVVK+ + AS+F RV+FV+EDW K
Sbjct: 428 LSSKTEGDGKLMMCYRIHITPSKIYCLGPEEEVSNYVVKHHKQYASDFARVTFVDEDWSK 487
Query: 1068 LSSDTLSTIVEHGLFSKPYRTDIYKRVATILRDGISIGSKKFEFLAFSASQLRSNSFWMF 1247
L D +S G FS+P +T +Y R+ +IL++G SIG KK+EFLAFSASQLR +S WMF
Sbjct: 488 LFPDAISARTGRGFFSQPLKTGLYYRIFSILKEGFSIGPKKYEFLAFSASQLRGSSVWMF 547
Query: 1248 ASTGSETAESIRNWMGQFNKILSVSKCAARIGQLFSSSSQTFEIPSRDVQVIEDVEVITD 1427
AS S AE IR WMG F +I SVSKCAAR+GQLFSSS QT EI RDV+ I D+EV TD
Sbjct: 548 ASNDSLKAEDIRRWMGNFEEIRSVSKCAARMGQLFSSSRQTLEILPRDVEEIPDIEVTTD 607
Query: 1428 GVKYCFSDGIGKISLAFARQVAQKCGLNTT--PSAFQIRYGGYKGVVAVDRTSFRKLSLR 1601
G KY FSDGIGKIS FA+++A + GL+ T PSAFQIRYGGYKGVVAVD SFR LSLR
Sbjct: 608 GTKYIFSDGIGKISERFAKEMACRIGLDYTNPPSAFQIRYGGYKGVVAVDPDSFRNLSLR 667
Query: 1602 ASMRKFDSDVTMLNVTKSSESLPCYLNREIISLLSTLGIKDEIFESMLHDQIRRLDEMLT 1781
SM+KF+S M N+T +S+S PCY+NREIISLLSTLGI+DEIFE M D +R LDEMLT
Sbjct: 668 PSMKKFESKSRMFNITSTSKSQPCYMNREIISLLSTLGIRDEIFELMQQDDMRELDEMLT 727
Query: 1782 NRGIALSELNRMTGAEIRTAVKMLMYGYEPNLEPHLSMILRAHREYQLSDIRSRCRIFVP 1961
NR ALS L ++ AE +TA K+L+ GYEP+LEP+L MIL+AH++ +L+DIR+RC+I VP
Sbjct: 728 NREAALSVLGKIGSAETKTASKILLQGYEPSLEPYLLMILKAHQDNRLTDIRTRCKIHVP 787
Query: 1962 KGRVLLGCLDETGILNYGQVYIRVTLTEEELKDKDETFFK--NFDQTTAXXXXXXXXTKN 2135
KGRVL+GCLDETG L YGQVYIR++ +E KD + +F N + TA +KN
Sbjct: 788 KGRVLIGCLDETGELEYGQVYIRISKNSKEQKDNCQPYFSKDNGKEKTAVVVGKVAVSKN 847
Query: 2136 PCLHPGDIRVLHAVYELQLDDMGLVDCVVFPQKGERPHPNECSGGDLDGDLYFVCWDENL 2315
PCLHPGDIRVL AVY+ L LVDCVVFPQ+GERPHPNECSGGDLDGDLYF+ WDE L
Sbjct: 848 PCLHPGDIRVLEAVYDHGLYAKNLVDCVVFPQRGERPHPNECSGGDLDGDLYFITWDEKL 907
Query: 2316 IPLETDTPMDYVPRRPRLTDHEVNL------------------------EEIQKFFLDYM 2423
IP + D+PMDY RPR+ DH V L EEIQK+F+DYM
Sbjct: 908 IPEKVDSPMDYTAARPRIMDHVVTLEVVEALKRNKVPVTWSENIICITGEEIQKYFVDYM 967
Query: 2424 INDNLGAISNAHLVYADREPSKARSPQCLQLAKLHSMAVDFAKTGAPAEMPRNLRPREYP 2603
IND+LGAIS AHLV+ADR P KARSP+CLQLA LHSMAVDFAK+GAPAEMPR+LRP+EYP
Sbjct: 968 INDSLGAISTAHLVHADRHPMKARSPECLQLAGLHSMAVDFAKSGAPAEMPRSLRPKEYP 1027
Query: 2604 DFMERWDRPMYISTGVLGKLYRATVDETEKENPTATESGPLSRSIYDYDLEVEGFEAFLG 2783
DFMERWD+P YIS G LGKLYRA + P + S LS + YD DLEV GFE FL
Sbjct: 1028 DFMERWDKPTYISNGALGKLYRAAASRMQSA-PATSSSAQLSPA-YDPDLEVPGFEEFLA 1085
Query: 2784 YAEEFRDQYSDRLSSLMNYYGAEHEDEILTGNLRNKSIYLQRDKNKYGEMKDRILIAVRS 2963
AEE D Y ++LS+LM YYGAEHEDEILTGN+RN+ +YL++D +Y EMKDRI+ +V
Sbjct: 1086 SAEECYDLYEEKLSTLMGYYGAEHEDEILTGNIRNRLLYLKKDNKRYFEMKDRIIDSVEG 1145
Query: 2964 LQKEVDGWFKHSCYEVELPKMASAWYHVTYHPNYY--STTNFLSFPWIVCDVLLNIKDSR 3137
L KEV GWF S + E + ASAWY VTYHP++ F SFPWIVCD LL IK+S
Sbjct: 1146 LHKEVRGWFT-SRPKAETARRASAWYRVTYHPDHRRPGKKQFWSFPWIVCDELLKIKESN 1204
Query: 3138 K 3140
K
Sbjct: 1205 K 1205
Score = 146 bits (368), Expect(2) = 0.0
Identities = 72/178 (40%), Positives = 107/178 (60%)
Frame = +2
Query: 353 QLKYAPKIYRRISGPTLNSKFRVDRYHICREDLRFLWVRTVDFSTSCSIGKSCYLCLELA 532
+L YAP+I ISGP + S+F DR+H C+E+ +F WVR +DF+ + S GK L L L
Sbjct: 248 KLMYAPRICTTISGPAVYSRFSDDRFHACKENAKFTWVRALDFTPNHSFGKCSTLALVLD 307
Query: 533 EGLSVSEILTCLPYSQQLGDLALRKGESLCSSSQLVPIISYPESFTEKYEILFQLNSVLH 712
EG VS IL LP+S +LG+L + E S++VP++ P + YE+LF+LNS++H
Sbjct: 308 EGAPVSFILNSLPFSGELGELVISSMEFFGPLSKVVPLVDCPSGCSVSYEVLFRLNSLVH 367
Query: 713 MQKISCGQVNTEFFDILNSLSVETAMKLLRKFHKLKTTCYEPVRFIKNQLANMRKQKN 886
M KI VN + F L + V + ++ K KL+ TCY P++FI+ + N + N
Sbjct: 368 MGKIVAKHVNADLFKALEEIPVHISRRIFEKMSKLEFTCYGPLQFIQQEAHNRNRSHN 425
Score = 73.9 bits (180), Expect = 5e-10
Identities = 37/117 (31%), Positives = 58/117 (49%)
Frame = +2
Query: 14 LATDGRLPDFLRTRLDIRPATDDIAPRATDPRXXXXXXXXXXXXXXXXXEMEEVERWESV 193
LA+ GRLP FL + L + PA D+ PRA D E E + W+SV
Sbjct: 76 LASSGRLPRFLGSLLSVSPAPSDLLPRAPDLSLRVADARLLVGNRVAEREFEAADSWDSV 135
Query: 194 AAEIMPERKKLEFFVGHDGEQYKLEVNFADVLRSLGCRLSAGGEEGELNAVLLQLKY 364
E++P +++++ + HD + Y+LEV F D+ C G A+LLQ+++
Sbjct: 136 RVEVIPGKRRIDLHLNHDSQMYRLEVFFEDIRNCYQCSFDGAG------AILLQMRF 186