BLASTX nr result
ID: Stemona21_contig00016670
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00016670
(271 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT12934.1| DNA-directed RNA polymerase I subunit RPA1 [Aegil... 99 4e-19
gb|EMS52925.1| DNA-directed RNA polymerase I subunit rpa1 [Triti... 99 4e-19
ref|XP_003559192.1| PREDICTED: DNA-directed RNA polymerase I sub... 98 1e-18
dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryz... 94 2e-17
gb|ACN85238.1| putative RNA polymerase A(I) large subunit [Oryza... 94 2e-17
gb|EEE66008.1| hypothetical protein OsJ_21959 [Oryza sativa Japo... 94 2e-17
gb|EEC80966.1| hypothetical protein OsI_23688 [Oryza sativa Indi... 94 2e-17
ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I sub... 93 4e-17
ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I sub... 90 3e-16
ref|XP_002440173.1| hypothetical protein SORBIDRAFT_09g027223 [S... 90 3e-16
gb|ACN85329.1| putative RNA polymerase A(I) large subunit [Oryza... 90 3e-16
tpg|DAA45226.1| TPA: putative DNA-directed RNA polymerase family... 89 5e-16
gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza... 89 8e-16
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 85 9e-15
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub... 85 9e-15
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 85 9e-15
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 85 9e-15
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera] 85 9e-15
gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus pe... 82 7e-14
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr... 80 2e-13
>gb|EMT12934.1| DNA-directed RNA polymerase I subunit RPA1 [Aegilops tauschii]
Length = 1717
Score = 99.4 bits (246), Expect = 4e-19
Identities = 47/89 (52%), Positives = 68/89 (76%)
Frame = -1
Query: 271 LMCDIQHNLSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEAN 92
L+CD Q NL + + GY MF LK +LVPP++FR P+ +S G++EHPQNV+LSKVQEAN
Sbjct: 237 LLCDFQQNLCVSEKRRGYEMFFLKSMLVPPNRFR-PSTSSSLGIMEHPQNVMLSKVQEAN 295
Query: 91 ISLRNVIANDPDHPDIVPRWMDLQKTVNM 5
++L++ A+ P+H D++ RW DLQ +VN+
Sbjct: 296 LALQHDSAH-PNHMDVLTRWRDLQTSVNL 323
>gb|EMS52925.1| DNA-directed RNA polymerase I subunit rpa1 [Triticum urartu]
Length = 1915
Score = 99.4 bits (246), Expect = 4e-19
Identities = 47/89 (52%), Positives = 67/89 (75%)
Frame = -1
Query: 271 LMCDIQHNLSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEAN 92
L+CD Q NL + + GY MF LK +LVPP++FRP +S G++EHPQNV+LSKVQEAN
Sbjct: 537 LLCDFQKNLCVSEKRRGYEMFFLKSMLVPPNRFRPSTNSS-LGIMEHPQNVMLSKVQEAN 595
Query: 91 ISLRNVIANDPDHPDIVPRWMDLQKTVNM 5
++L++ ++P+H DI+ RW DLQ +VN+
Sbjct: 596 LALQH---DNPNHMDILTRWRDLQTSVNL 621
>ref|XP_003559192.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like
[Brachypodium distachyon]
Length = 1868
Score = 97.8 bits (242), Expect = 1e-18
Identities = 48/89 (53%), Positives = 67/89 (75%)
Frame = -1
Query: 271 LMCDIQHNLSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEAN 92
L+CD Q NLS+ + GY MF LK LLV P++FR P+ +S G++EHPQNVLL KVQEAN
Sbjct: 525 LLCDFQQNLSVSEKRRGYEMFFLKSLLVTPNRFR-PSTSSSLGIMEHPQNVLLGKVQEAN 583
Query: 91 ISLRNVIANDPDHPDIVPRWMDLQKTVNM 5
+++++ A+ P+H DI+ RW DLQ +VN+
Sbjct: 584 LAVQHDKAH-PNHMDIITRWRDLQTSVNL 611
>dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryza sativa Japonica
Group]
Length = 1748
Score = 94.0 bits (232), Expect = 2e-17
Identities = 49/91 (53%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = -1
Query: 271 LMCDIQHN-LSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEA 95
L+CD Q N LS+ + GY MF LK LLV P++FRP +S G++EHPQNVLLSKVQE+
Sbjct: 317 LLCDFQQNTLSVSEKRRGYEMFFLKNLLVAPNRFRPSISSS-LGIMEHPQNVLLSKVQES 375
Query: 94 NISLRNVIANDPDHPDIVPRWMDLQKTVNML 2
N++L+ IA +H +++ RWMDLQ+ VN+L
Sbjct: 376 NLALQQSIAAS-NHMEVLRRWMDLQRNVNVL 405
>gb|ACN85238.1| putative RNA polymerase A(I) large subunit [Oryza minuta]
Length = 563
Score = 94.0 bits (232), Expect = 2e-17
Identities = 49/91 (53%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Frame = -1
Query: 271 LMCDIQHN-LSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEA 95
L+CD Q N L++ + GY MF LK LLV P++FR +SG G++EHPQNVLLSKVQE+
Sbjct: 317 LLCDFQQNTLNVSEKRRGYEMFFLKNLLVAPNRFRSST-SSGLGIVEHPQNVLLSKVQES 375
Query: 94 NISLRNVIANDPDHPDIVPRWMDLQKTVNML 2
N++L+ IA +H D++ RWMDLQ++VN+L
Sbjct: 376 NLALQQSIAAS-NHMDVLRRWMDLQRSVNVL 405
>gb|EEE66008.1| hypothetical protein OsJ_21959 [Oryza sativa Japonica Group]
Length = 994
Score = 94.0 bits (232), Expect = 2e-17
Identities = 49/91 (53%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = -1
Query: 271 LMCDIQHN-LSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEA 95
L+CD Q N LS+ + GY MF LK LLV P++FRP +S G++EHPQNVLLSKVQE+
Sbjct: 99 LLCDFQQNTLSVSEKRRGYEMFFLKNLLVAPNRFRPSISSS-LGIMEHPQNVLLSKVQES 157
Query: 94 NISLRNVIANDPDHPDIVPRWMDLQKTVNML 2
N++L+ IA +H +++ RWMDLQ+ VN+L
Sbjct: 158 NLALQQSIAAS-NHMEVLRRWMDLQRNVNVL 187
>gb|EEC80966.1| hypothetical protein OsI_23688 [Oryza sativa Indica Group]
Length = 1350
Score = 94.0 bits (232), Expect = 2e-17
Identities = 49/91 (53%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = -1
Query: 271 LMCDIQHN-LSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEA 95
L+CD Q N LS+ + GY MF LK LLV P++FRP +S G++EHPQNVLLSKVQE+
Sbjct: 403 LLCDFQQNTLSVSEKRRGYEMFFLKNLLVAPNRFRPSISSS-LGIMEHPQNVLLSKVQES 461
Query: 94 NISLRNVIANDPDHPDIVPRWMDLQKTVNML 2
N++L+ IA +H +++ RWMDLQ+ VN+L
Sbjct: 462 NLALQQSIAAS-NHMEVLRRWMDLQRNVNVL 491
>ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Setaria
italica]
Length = 1682
Score = 92.8 bits (229), Expect = 4e-17
Identities = 48/91 (52%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Frame = -1
Query: 271 LMCDIQHN-LSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEA 95
L+CD Q + LS+ + GY MF L LLV P++FRP +S G++EHPQNVLLSKVQEA
Sbjct: 327 LLCDFQQDTLSVSEKRKGYEMFFLNSLLVAPNRFRPSTSSS-LGIMEHPQNVLLSKVQEA 385
Query: 94 NISLRNVIANDPDHPDIVPRWMDLQKTVNML 2
N++L++ A+ +H D++ RWMDLQ++VN+L
Sbjct: 386 NLALQHNSASS-NHMDVLRRWMDLQRSVNVL 415
>ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Oryza
brachyantha]
Length = 1755
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/91 (50%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Frame = -1
Query: 271 LMCDIQHN-LSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEA 95
L+CD Q N L++ ++ GY MF LK LLV P++FRP +S G++EHPQN+LLSKVQEA
Sbjct: 309 LLCDFQQNTLNVSEKKRGYEMFFLKNLLVAPNRFRPSIHSS-LGIMEHPQNILLSKVQEA 367
Query: 94 NISLRNVIANDPDHPDIVPRWMDLQKTVNML 2
N++L+ A +H +++ RWMD+Q++VN+L
Sbjct: 368 NLALQQSNAAS-NHMEVLRRWMDMQRSVNVL 397
>ref|XP_002440173.1| hypothetical protein SORBIDRAFT_09g027223 [Sorghum bicolor]
gi|241945458|gb|EES18603.1| hypothetical protein
SORBIDRAFT_09g027223 [Sorghum bicolor]
Length = 799
Score = 90.1 bits (222), Expect = 3e-16
Identities = 48/91 (52%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = -1
Query: 271 LMCDIQHN-LSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEA 95
L+CD Q N LS + GY MF L LLV P++FRP +S G++EHPQ+VLLSKVQEA
Sbjct: 311 LLCDFQKNTLSEPEKRRGYEMFFLNSLLVAPNRFRPSTNSS-LGMMEHPQSVLLSKVQEA 369
Query: 94 NISLRNVIANDPDHPDIVPRWMDLQKTVNML 2
N++L++ A+ +H D++ RWMDLQ++VN+L
Sbjct: 370 NLALQHHNASS-NHMDVIRRWMDLQRSVNVL 399
>gb|ACN85329.1| putative RNA polymerase A(I) large subunit [Oryza brachyantha]
Length = 1138
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/91 (50%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Frame = -1
Query: 271 LMCDIQHN-LSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEA 95
L+CD Q N L++ ++ GY MF LK LLV P++FRP +S G++EHPQN+LLSKVQEA
Sbjct: 309 LLCDFQQNTLNVSEKKRGYEMFFLKNLLVAPNRFRPSIHSS-LGIMEHPQNILLSKVQEA 367
Query: 94 NISLRNVIANDPDHPDIVPRWMDLQKTVNML 2
N++L+ A +H +++ RWMD+Q++VN+L
Sbjct: 368 NLALQQSNAAS-NHMEVLRRWMDMQRSVNVL 397
>tpg|DAA45226.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 548
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/91 (50%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = -1
Query: 271 LMCDIQHNLSLYM-RENGYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEA 95
L+CD Q N+S + GY MF L LLV P++FRP +S G++EHPQ+VLLSKVQE+
Sbjct: 311 LLCDFQKNMSSEPEKRRGYEMFFLSSLLVAPNRFRPSTSSS-LGIMEHPQSVLLSKVQES 369
Query: 94 NISLRNVIANDPDHPDIVPRWMDLQKTVNML 2
N++L++ A+ +H D++ RWMDLQ++VN+L
Sbjct: 370 NLALQHNNASS-NHMDVLQRWMDLQRSVNVL 399
>gb|ACN85301.1| putative RNA polymerase A(I) large subunit [Oryza coarctata]
Length = 1830
Score = 88.6 bits (218), Expect = 8e-16
Identities = 46/91 (50%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = -1
Query: 271 LMCDIQHN-LSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEA 95
L+CD Q N L++ + GY MF LK LLV P++FRP +S G++EHPQNVLL KVQEA
Sbjct: 308 LLCDFQQNTLNVSDKGRGYEMFFLKNLLVAPNRFRPSISSS-LGIMEHPQNVLLGKVQEA 366
Query: 94 NISLRNVIANDPDHPDIVPRWMDLQKTVNML 2
N++L+ + +H +++ RWMDLQ++VN+L
Sbjct: 367 NLALQQSNTSS-NHMEVLRRWMDLQRSVNVL 396
>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
subunit RPA1-like [Cucumis sativus]
Length = 1652
Score = 85.1 bits (209), Expect = 9e-15
Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Frame = -1
Query: 271 LMCDIQHNLSLYMREN--GYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQE 98
L+C ++S N G++MF L+ +LVPP KFRPPA G V+EHPQ VLL+KV +
Sbjct: 297 LLCSFISDISQQGHGNKAGHSMFFLESVLVPPIKFRPPA-KGGDSVMEHPQTVLLNKVLQ 355
Query: 97 ANISLRNVIANDPDHPDIVPRWMDLQKTVNML 2
+NISL N AN +H IV WMDLQ+++N+L
Sbjct: 356 SNISLGNGHANKSEHSKIVRLWMDLQQSINIL 387
>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
sativus]
Length = 1650
Score = 85.1 bits (209), Expect = 9e-15
Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Frame = -1
Query: 271 LMCDIQHNLSLYMREN--GYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQE 98
L+C ++S N G++MF L+ +LVPP KFRPPA G V+EHPQ VLL+KV +
Sbjct: 291 LLCSFISDISQQGHGNKAGHSMFFLESVLVPPIKFRPPA-KGGDSVMEHPQTVLLNKVLQ 349
Query: 97 ANISLRNVIANDPDHPDIVPRWMDLQKTVNML 2
+NISL N AN +H IV WMDLQ+++N+L
Sbjct: 350 SNISLGNGHANKSEHSKIVRLWMDLQQSINIL 381
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/87 (49%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = -1
Query: 259 IQHNLSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGR-GVLEHPQNVLLSKVQEANISL 83
+Q L + GY+MF L+ +LVPP KFRPP+ G+ V+EHPQ VLL KV +ANI+L
Sbjct: 320 LQERLGASGNKAGYSMFFLETILVPPIKFRPPS--KGQISVMEHPQTVLLGKVLQANIAL 377
Query: 82 RNVIANDPDHPDIVPRWMDLQKTVNML 2
N AN+ + I+ RWMDLQ+++N+L
Sbjct: 378 GNAHANNSERSKIISRWMDLQQSINVL 404
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/87 (49%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = -1
Query: 259 IQHNLSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGR-GVLEHPQNVLLSKVQEANISL 83
+Q L + GY+MF L+ +LVPP KFRPP+ G+ V+EHPQ VLL KV +ANI+L
Sbjct: 391 LQERLGASGNKAGYSMFFLETILVPPIKFRPPS--KGQISVMEHPQTVLLGKVLQANIAL 448
Query: 82 RNVIANDPDHPDIVPRWMDLQKTVNML 2
N AN+ + I+ RWMDLQ+++N+L
Sbjct: 449 GNAHANNSERSKIISRWMDLQQSINVL 475
>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
Length = 1350
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/87 (49%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = -1
Query: 259 IQHNLSLYMRENGYTMFLLKVLLVPPSKFRPPAGTSGR-GVLEHPQNVLLSKVQEANISL 83
+Q L + GY+MF L+ +LVPP KFRPP+ G+ V+EHPQ VLL KV +ANI+L
Sbjct: 439 LQERLGASGNKAGYSMFFLETILVPPIKFRPPS--KGQISVMEHPQTVLLGKVLQANIAL 496
Query: 82 RNVIANDPDHPDIVPRWMDLQKTVNML 2
N AN+ + I+ RWMDLQ+++N+L
Sbjct: 497 GNAHANNSERSKIISRWMDLQQSINVL 523
>gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
Length = 1612
Score = 82.0 bits (201), Expect = 7e-14
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = -1
Query: 223 GYTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEANISLRNVIANDPDHPDI 44
GY+MF L+ +LVPP KFRPP+ G V+EHPQ VLLSKV EAN+SL + N +H I
Sbjct: 243 GYSMFFLETVLVPPIKFRPPS-KGGDSVMEHPQTVLLSKVLEANVSLSQTLTN-LEHSRI 300
Query: 43 VPRWMDLQKTVNML 2
+ RW DLQ+++N++
Sbjct: 301 IRRWRDLQESINVM 314
>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
gi|557103957|gb|ESQ44311.1| hypothetical protein
EUTSA_v10005738mg [Eutrema salsugineum]
Length = 1697
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/73 (54%), Positives = 52/73 (71%)
Frame = -1
Query: 220 YTMFLLKVLLVPPSKFRPPAGTSGRGVLEHPQNVLLSKVQEANISLRNVIANDPDHPDIV 41
Y+MF L+ +LVPP+KFR P G V+EHPQ V L+KV E+NISL N N D P I+
Sbjct: 321 YSMFFLENILVPPTKFRAPT-KGGDSVMEHPQTVGLNKVLESNISLGNACTNKLDQPKII 379
Query: 40 PRWMDLQKTVNML 2
RWM+LQ++VN+L
Sbjct: 380 SRWMNLQESVNVL 392