BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00015776
         (1694 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF96555.1| retrotransposon protein, putative, Ty3-gypsy subc...   193   1e-59
gb|AAR06299.1| putative gag-pol protein [Oryza sativa Japonica G...   193   1e-59
ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626...   227   1e-56
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607...   220   1e-54
ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614...   218   8e-54
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             216   3e-53
ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608...   214   7e-53
ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617...   212   3e-52
gb|ABA97642.2| retrotransposon protein, putative, Ty3-gypsy subc...   198   1e-51
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   208   5e-51
emb|CAE05745.1| OSJNBb0017I01.25 [Oryza sativa Japonica Group] g...   208   7e-51
ref|XP_004292410.1| PREDICTED: uncharacterized protein LOC101297...   207   1e-50
gb|AAU44314.1| putative polyprotein [Oryza sativa Japonica Group]     204   9e-50
emb|CAN60625.1| hypothetical protein VITISV_027087 [Vitis vinifera]   203   2e-49
gb|ABA95011.1| transposon protein, putative, unclassified [Oryza...   202   3e-49
gb|AAK52121.1|AC079936_17 Putative retroelement [Oryza sativa Ja...   202   3e-49
gb|ABA96833.1| retrotransposon protein, putative, unclassified [...   202   4e-49
gb|ABF98665.1| retrotransposon protein, putative, unclassified [...   202   4e-49
gb|AAO17025.1| Putative gag-pol precursor [Oryza sativa Japonica...   202   5e-49
gb|AAX95884.1| retrotransposon protein, putative, unclassified [...   202   5e-49

>gb|ABF96555.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1659

 Score =  193 bits (490), Expect(2) = 1e-59
 Identities = 130/423 (30%), Positives = 202/423 (47%), Gaps = 10/423 (2%)
 Frame = +1

Query: 454  DAQFQAFLAGLRSGRLLTDLSRNEPKSMADLLARTEVFHKAEHINMARRESEKDEAVHKK 633
            D    AF  G+R   L+    R  PK++  +  +   + KAE    A ++S       K 
Sbjct: 466  DVIIAAFTKGIRHEDLVGKFGRKPPKTVKQMFEKANEYAKAEDAITASKQSG---TTWKP 522

Query: 634  KKDNARRPESKDAPPPKKQAHEHPKTEDTIPLKAPIEQIFMEIKKDDLLRPPRPIKEPQS 813
            KKD      S              K E+ + + +P  +    +   + +           
Sbjct: 523  KKDTPTAGGSGSNNHSNNHKDRKRKPEELVAITSPSSRQRSRVNTFNKI----------- 571

Query: 814  GPGVNKFCHYHQAKGNLTRDCFMLRDEIERLIRRGYLHQYVANDPRPP------AETTDQ 975
               +N  C +H    ++ +DCF+ +          +  QYV N  +P       +   D 
Sbjct: 572  ---MNSQCLHHPNSNHVAKDCFVYKQ---------FAEQYVKNARKPSDGDQGTSNKKDD 619

Query: 976  PDQHPPVV----REIQMIASGFPVSKVNQANDSRSSPMPSPHQCTQVVEASPSQPADERA 1143
             D  P       +E+  I  G P+S  ++     +          ++    P+ P D R 
Sbjct: 620  EDDAPTGFQDHRKELNHIFGG-PLSYESKRKQKLTE--------REINAVQPNTPQDLRW 670

Query: 1144 QPAEELEKVYLHPDHPDKPLLVGHTLSGDLRGSLIECLRSNLDLFAWSYDDMPGIDPAVI 1323
                E+   +   DHPD+ +  G       R  L     +N D+FAW   DMPGI   VI
Sbjct: 671  S---EIAIKFDRSDHPDRVVHPG-------RYPL-----NNKDIFAWKPSDMPGIPREVI 715

Query: 1324 THRLNVDPNKKPVQQKKRKAAPESQQFINEQVEQYLKISFVRPVLYPTWVANPVLVKKAS 1503
             H L+V  + KP++Q+ R+ A + +  I E++ + L   F++ VL+P W+ANPVLV+K +
Sbjct: 716  EHSLHVKEDTKPIKQRLRRFAQDMKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKT 775

Query: 1504 GKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDNEEK 1683
            G+WRMCVD+TDLNK+CPKDPF LPRIDQ++DST+G ELL+F+D +SGY+QIR+   +  K
Sbjct: 776  GQWRMCVDYTDLNKSCPKDPFGLPRIDQVIDSTAGCELLSFLDCYSGYHQIRLKESDCLK 835

Query: 1684 TAF 1692
            T+F
Sbjct: 836  TSF 838



 Score = 65.9 bits (159), Expect(2) = 1e-59
 Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
 Frame = +2

Query: 92  FVAEIRAEPLSPKFKLPSMDKYKGLSDPTNHLASF-LDQMALHGYSDAITCRAFPLTLKG 268
           F +E+R       FK   ++KY G ++P + L  + L   A+ G S A+     P+ L  
Sbjct: 336 FTSELRRVDWPADFKPTGIEKYDGTTNPESWLTVYGLAVRAVGGDSKAMA-NYLPVALAD 394

Query: 269 IARVWFSQLRPNSIASWADLSRAFVTHFVGMCRQKKTASHLFNTTQKKDESIQDYVTRFT 448
            AR W   L   +I SWA+L   F+ +F G   +  T   L+N  QK  ES++DY+ RF+
Sbjct: 395 SARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTHFDLYNIVQKSGESLRDYIRRFS 454

Query: 449 TE 454
            +
Sbjct: 455 KQ 456


>gb|AAR06299.1| putative gag-pol protein [Oryza sativa Japonica Group]
          Length = 1653

 Score =  193 bits (490), Expect(2) = 1e-59
 Identities = 130/423 (30%), Positives = 202/423 (47%), Gaps = 10/423 (2%)
 Frame = +1

Query: 454  DAQFQAFLAGLRSGRLLTDLSRNEPKSMADLLARTEVFHKAEHINMARRESEKDEAVHKK 633
            D    AF  G+R   L+    R  PK++  +  +   + KAE    A ++S       K 
Sbjct: 466  DVIIAAFTKGIRHEDLVGKFGRKPPKTVKQMFEKANEYAKAEDAITASKQSG---TTWKP 522

Query: 634  KKDNARRPESKDAPPPKKQAHEHPKTEDTIPLKAPIEQIFMEIKKDDLLRPPRPIKEPQS 813
            KKD      S              K E+ + + +P  +    +   + +           
Sbjct: 523  KKDTPTAGGSGSNNHSNNHKDRKRKPEELVAITSPSSRQRSRVNTFNKI----------- 571

Query: 814  GPGVNKFCHYHQAKGNLTRDCFMLRDEIERLIRRGYLHQYVANDPRPP------AETTDQ 975
               +N  C +H    ++ +DCF+ +          +  QYV N  +P       +   D 
Sbjct: 572  ---MNSQCLHHPNSNHVAKDCFVYKQ---------FAEQYVKNARKPSDGDQGTSNKKDD 619

Query: 976  PDQHPPVV----REIQMIASGFPVSKVNQANDSRSSPMPSPHQCTQVVEASPSQPADERA 1143
             D  P       +E+  I  G P+S  ++     +          ++    P+ P D R 
Sbjct: 620  EDDAPTGFQDHRKELNHIFGG-PLSYESKRKQKLTE--------REINAVQPNTPQDLRW 670

Query: 1144 QPAEELEKVYLHPDHPDKPLLVGHTLSGDLRGSLIECLRSNLDLFAWSYDDMPGIDPAVI 1323
                E+   +   DHPD+ +  G       R  L     +N D+FAW   DMPGI   VI
Sbjct: 671  S---EIAIKFDRSDHPDRVVHPG-------RYPL-----NNKDIFAWKPSDMPGIPREVI 715

Query: 1324 THRLNVDPNKKPVQQKKRKAAPESQQFINEQVEQYLKISFVRPVLYPTWVANPVLVKKAS 1503
             H L+V  + KP++Q+ R+ A + +  I E++ + L   F++ VL+P W+ANPVLV+K +
Sbjct: 716  EHSLHVKEDTKPIKQRLRRFAQDMKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKT 775

Query: 1504 GKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDNEEK 1683
            G+WRMCVD+TDLNK+CPKDPF LPRIDQ++DST+G ELL+F+D +SGY+QIR+   +  K
Sbjct: 776  GQWRMCVDYTDLNKSCPKDPFGLPRIDQVIDSTAGCELLSFLDCYSGYHQIRLKESDCLK 835

Query: 1684 TAF 1692
            T+F
Sbjct: 836  TSF 838



 Score = 65.9 bits (159), Expect(2) = 1e-59
 Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
 Frame = +2

Query: 92  FVAEIRAEPLSPKFKLPSMDKYKGLSDPTNHLASF-LDQMALHGYSDAITCRAFPLTLKG 268
           F +E+R       FK   ++KY G ++P + L  + L   A+ G S A+     P+ L  
Sbjct: 336 FTSELRRVDWPADFKPTGIEKYDGTTNPESWLTVYGLAVRAVGGDSKAMA-NYLPVALAD 394

Query: 269 IARVWFSQLRPNSIASWADLSRAFVTHFVGMCRQKKTASHLFNTTQKKDESIQDYVTRFT 448
            AR W   L   +I SWA+L   F+ +F G   +  T   L+N  QK  ES++DY+ RF+
Sbjct: 395 SARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTHFDLYNIVQKSGESLRDYIRRFS 454

Query: 449 TE 454
            +
Sbjct: 455 KQ 456


>ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626228 [Citrus sinensis]
          Length = 1189

 Score =  227 bits (578), Expect = 1e-56
 Identities = 105/185 (56%), Positives = 140/185 (75%)
 Frame = +1

Query: 1138 RAQPAEELEKVYLHPDHPDKPLLVGHTLSGDLRGSLIECLRSNLDLFAWSYDDMPGIDPA 1317
            R +P E+LE V L P++P K + +G  L G+ +  L++CL+++ D+FAW+++DMPGIDP 
Sbjct: 721  RQEPVEDLETVSLGPENPGKTIRIGSRLEGEQKQELVKCLQAHADVFAWTHEDMPGIDPE 780

Query: 1318 VITHRLNVDPNKKPVQQKKRKAAPESQQFINEQVEQYLKISFVRPVLYPTWVANPVLVKK 1497
            V  HRL +    + V+QK+R    E  + IN +VE+ L+  F+R V YP W++N VLVKK
Sbjct: 781  VACHRLAIKKGARAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVSYPEWISNVVLVKK 840

Query: 1498 ASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDNE 1677
            A+GKWRMCVDFTDLNKACPKD FPLP+IDQLVDST+G+ LL+FMDAFSGYNQI M+  +E
Sbjct: 841  ANGKWRMCVDFTDLNKACPKDSFPLPKIDQLVDSTAGHGLLSFMDAFSGYNQIPMYEPDE 900

Query: 1678 EKTAF 1692
            E TAF
Sbjct: 901  ESTAF 905


>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
          Length = 1866

 Score =  220 bits (561), Expect = 1e-54
 Identities = 103/185 (55%), Positives = 136/185 (73%)
 Frame = +1

Query: 1138 RAQPAEELEKVYLHPDHPDKPLLVGHTLSGDLRGSLIECLRSNLDLFAWSYDDMPGIDPA 1317
            R +P E+L++V +    P K + VG  L   ++G L++CL+S+ D+FAWS++DMPGID  
Sbjct: 786  RQEPVEKLKEVVVSRSDPSKVVKVGSELGEAIKGELVKCLQSHADIFAWSHEDMPGIDRG 845

Query: 1318 VITHRLNVDPNKKPVQQKKRKAAPESQQFINEQVEQYLKISFVRPVLYPTWVANPVLVKK 1497
            +  H+L V    +PV+QK+R    E  + IN +VE+ LK  F+R   YP W++N VLVKK
Sbjct: 846  IACHKLAVKRGARPVRQKRRCFNHERYEAINAEVEKLLKAGFIREAKYPEWISNVVLVKK 905

Query: 1498 ASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDNE 1677
            A+GKWRMCVDFTDLNKACPKD FPLP+IDQLVDST+G+ LL+FMDAFSGYNQI M+  +E
Sbjct: 906  ANGKWRMCVDFTDLNKACPKDSFPLPKIDQLVDSTAGHSLLSFMDAFSGYNQIPMNEQDE 965

Query: 1678 EKTAF 1692
            E T F
Sbjct: 966  ESTTF 970



 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 41/145 (28%), Positives = 68/145 (46%)
 Frame = +2

Query: 11  RLGGIEDVVQGRAPINIEAMVRQVASPFVAEIRAEPLSPKFKLPSMDKYKGLSDPTNHLA 190
           RL  + + +QG+       ++    SP   EI +  +   F+ P + KY G SDP  H+ 
Sbjct: 136 RLAQVIEEMQGKRKPPSWRIMLDEESPLSTEIMSTIIPKDFRFPDL-KYSGRSDPLVHIE 194

Query: 191 SFLDQMALHGYSDAITCRAFPLTLKGIARVWFSQLRPNSIASWADLSRAFVTHFVGMCRQ 370
            F D   + G + A  CR  PLTL+G AR W+ +L    I  +  + +     F G    
Sbjct: 195 RFNDMTGVQGLTPAQRCRVLPLTLEGRAREWYRKLPRGGIKGYEQICQELAEQFRGAVAP 254

Query: 371 KKTASHLFNTTQKKDESIQDYVTRF 445
           +     L    Q++ ES++D++ R+
Sbjct: 255 EDDMMELMGMRQEEHESLRDFIKRY 279



 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 62/238 (26%), Positives = 99/238 (41%), Gaps = 20/238 (8%)
 Frame = +1

Query: 646  ARRPESKDAPPPKKQAHEHPKTE---------DTIPLKAPIEQIFMEIKKDDLLRPPRPI 798
            ARRP+     P +   H+    +            PLK  +E+++  I+   LL PP PI
Sbjct: 431  ARRPDQLATMPARDDVHDSRAVQLVDQSLTYRQHTPLKISMEELYERIEGRGLLYPPAPI 490

Query: 799  KEPQSGPGVNKFCHYHQAKGNLTRDCFMLRDEIERLIRRGYLHQYVAN-DPRPPAETTDQ 975
             +P      ++FC +H   G+    C  L+ ++E L+R  YL +YV    P   ++ T  
Sbjct: 491  TKPTHRRDKSRFCKFHDTHGHTINQCRDLKTQVEDLVRNRYLDEYVDGISPATESQYTRD 550

Query: 976  PDQHPPVVRE---IQMIASGFPVSKVNQANDSRSSPMPSPHQCTQVVEASPSQPADERAQ 1146
                  + RE   +++IA G        A DS  +            E   + PA +RA+
Sbjct: 551  EGVERSLEREQSTVRVIAGG-----PTLAGDSNRARKNYGRYALTSKEVLFNLPAAKRAK 605

Query: 1147 P-------AEELEKVYLHPDHPDKPLLVGHTLSGDLRGSLIECLRSNLDLFAWSYDDM 1299
                     E  E+  L+P H D  ++     S +LR  L++   S   LF  + DDM
Sbjct: 606  VRQVPIMWTENDEEGILYP-HEDALVIKALVASTELRRILVDTGSSVDILFKSALDDM 662


>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
          Length = 1089

 Score =  218 bits (554), Expect = 8e-54
 Identities = 102/185 (55%), Positives = 135/185 (72%)
 Frame = +1

Query: 1138 RAQPAEELEKVYLHPDHPDKPLLVGHTLSGDLRGSLIECLRSNLDLFAWSYDDMPGIDPA 1317
            R +P E+LE+V +    P + + VG  L   ++  L++CL+S+ D+FAWS++DMPGID  
Sbjct: 619  RQEPVEKLEEVVISRSDPSRVVKVGSELGEAIKAELVKCLQSHADVFAWSHEDMPGIDRG 678

Query: 1318 VITHRLNVDPNKKPVQQKKRKAAPESQQFINEQVEQYLKISFVRPVLYPTWVANPVLVKK 1497
            +  H+L V    +PV+QK+R    E  + IN +VE+ LK  F+R   YP W++N VLVKK
Sbjct: 679  IACHKLAVKRGARPVRQKRRCFNHERYEAINAEVEKLLKAGFIREAKYPEWISNVVLVKK 738

Query: 1498 ASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDNE 1677
            A+GKWRMCVDFTDLNKACPKD FPLP+IDQLVDST+G+ LL+FMDAFSGYNQI M+  +E
Sbjct: 739  ANGKWRMCVDFTDLNKACPKDSFPLPKIDQLVDSTAGHGLLSFMDAFSGYNQIPMNEQDE 798

Query: 1678 EKTAF 1692
            E T F
Sbjct: 799  ENTTF 803



 Score = 64.3 bits (155), Expect = 2e-07
 Identities = 35/110 (31%), Positives = 53/110 (48%)
 Frame = +2

Query: 131 FKLPSMDKYKGLSDPTNHLASFLDQMALHGYSDAITCRAFPLTLKGIARVWFSQLRPNSI 310
           F+ P + KY G SDP  H+  F D   + G + A  CR F LTL+G AR W+ +L    I
Sbjct: 9   FRFPDL-KYSGRSDPLVHIERFNDMTGVQGLTPAQRCRVFLLTLEGRAREWYRKLPRGGI 67

Query: 311 ASWADLSRAFVTHFVGMCRQKKTASHLFNTTQKKDESIQDYVTRFTTEML 460
             +  +       F G    +     L    Q++ ES++D+V R+   +L
Sbjct: 68  KGYEQMCLELAEQFRGAVAPEDDMMELMGMKQEEHESLRDFVKRYHRAVL 117



 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 20/236 (8%)
 Frame = +1

Query: 652  RPESKDAPPPKKQAHEHPKTE---------DTIPLKAPIEQIFMEIKKDDLLRPPRPIKE 804
            RPE   A P +   H+    +            PLK  +E+++  I+   LL PP PI +
Sbjct: 266  RPEQIPAIPARCDIHDSRAVQLVDQSLAYKQYTPLKISMEELYERIEGRGLLYPPAPITK 325

Query: 805  PQSGPGVNKFCHYHQAKGNLTRDCFMLRDEIERLIRRGYLHQYVAN-DPRPPAETTDQPD 981
            P      ++FC +H   G+    C  L+ ++E L+R  YL +YV    P   ++ T    
Sbjct: 326  PTHRRDKSRFCKFHDTHGHTISQCRDLKIQVEDLVRNRYLDEYVDGVSPVMESQYTRDEG 385

Query: 982  QHPPVVRE---IQMIASGFPVSKVNQANDSRSSPMPSPHQCTQVVEASPSQPADERAQP- 1149
                + RE   I++IA G        A DS  +            E   + PA ++A+  
Sbjct: 386  VERDLEREQPTIRVIAGG-----PTLAGDSNRARKNYGRYAMTGREVLLNLPAAKKARVR 440

Query: 1150 ------AEELEKVYLHPDHPDKPLLVGHTLSGDLRGSLIECLRSNLDLFAWSYDDM 1299
                   E+ E+  L+P H D  ++     S +LR  L++   S   LF  + DDM
Sbjct: 441  QVPIMWTEDDEEGILYP-HEDALVIKALVASTELRRILVDTGSSVDILFKSALDDM 495


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  216 bits (549), Expect = 3e-53
 Identities = 109/213 (51%), Positives = 140/213 (65%), Gaps = 11/213 (5%)
 Frame = +1

Query: 1087 HQCTQ--------VVEASPSQPADERAQPAEEL---EKVYLHPDHPDKPLLVGHTLSGDL 1233
            HQC +         + A        R+    EL   E V +    P + + VG  +S  +
Sbjct: 723  HQCVKFPTHNGIFTLRAPKEAKTPSRSYEESELCRTEMVNIDESDPTRCVGVGAEISPSI 782

Query: 1234 RGSLIECLRSNLDLFAWSYDDMPGIDPAVITHRLNVDPNKKPVQQKKRKAAPESQQFINE 1413
            R  LI  L+ N   FAWS +DM GIDPA+  H LNVDP  KPV+QK+RK  PE  + +NE
Sbjct: 783  RLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNVDPTFKPVKQKRRKLGPERARAVNE 842

Query: 1414 QVEQYLKISFVRPVLYPTWVANPVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLV 1593
            +VE+ LK   +  V YP W+ANPV+VKK +GKWR+CVD+TDLNKACPKD +PLP ID+LV
Sbjct: 843  EVEKLLKAGQIIEVKYPEWLANPVVVKKKNGKWRVCVDYTDLNKACPKDSYPLPHIDRLV 902

Query: 1594 DSTSGNELLTFMDAFSGYNQIRMHPDNEEKTAF 1692
            ++TSGN LL+FMDAFSGYNQI MH D++EKT+F
Sbjct: 903  EATSGNGLLSFMDAFSGYNQILMHKDDQEKTSF 935



 Score = 59.7 bits (143), Expect(2) = 9e-10
 Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
 Frame = +2

Query: 86  SPFVAEIRAEPLSPKFKLPSMDKYKGLSDPTNHLASF-----LDQMALHGYSDAITCRAF 250
           +PF   I    +    K+  ++ Y G +DP   L SF       ++ +  + DA  C+ F
Sbjct: 202 TPFTRRITNVSIRGAQKI-KLESYNGRNDPKEFLTSFNVAINRAELTIDNF-DAGRCQIF 259

Query: 251 PLTLKGIARVWFSQLRPNSIASWADLSRAFVTHFVGMCRQKKTASHLFNTTQKKDESIQD 430
              L G A  WFS+L+PNSI S+  L+ +F+ H+  +   + + + L++ +Q   ES++ 
Sbjct: 260 IEHLTGPAHNWFSRLKPNSIDSFHQLTSSFLKHYAPLIENQTSNADLWSISQGAKESLRS 319

Query: 431 YVTRF 445
           +V RF
Sbjct: 320 FVDRF 324



 Score = 32.0 bits (71), Expect(2) = 9e-10
 Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 7/167 (4%)
 Frame = +1

Query: 496 RLLTDLSRNEPKSMADLLARTEVFHKAEHINMARRESEKDEAVHKKKKDNARRPESKDAP 675
           R   D++ + P ++ D L R   F           E E+++ +  +K ++ + P  KDA 
Sbjct: 351 RFRDDITLHAPSTLEDALHRASRFI----------ELEEEKLILARKHNSTKTPACKDAV 400

Query: 676 PPK---KQAHEHPKTEDTIPLKAPIEQIFMEIKKDDLLRP----PRPIKEPQSGPGVNKF 834
             K     ++E  +  D  P        F+   +    +P     R    P +GP    +
Sbjct: 401 VIKVGPDDSNEPRQHLDRNPSAGRKPTSFLVSTETPDAKPWNKYIRDADSPAAGP---MY 457

Query: 835 CHYHQAKGNLTRDCFMLRDEIERLIRRGYLHQYVANDPRPPAETTDQ 975
           C YH+++ + T +C  L+  +    + G +        RPP    +Q
Sbjct: 458 CEYHKSRAHSTENCRFLQGLLMAKYKSGGI---TIECDRPPINNKNQ 501


>ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608416 [Citrus sinensis]
          Length = 1313

 Score =  214 bits (546), Expect = 7e-53
 Identities = 100/185 (54%), Positives = 135/185 (72%)
 Frame = +1

Query: 1138 RAQPAEELEKVYLHPDHPDKPLLVGHTLSGDLRGSLIECLRSNLDLFAWSYDDMPGIDPA 1317
            R +P E+LE+V +    P + + VG  L  +++  L++CL+S+ D+FAWS++DMPGID  
Sbjct: 631  RQEPVEKLEEVVVSRSDPSRVVKVGSELGREIKTELVKCLQSHADIFAWSHEDMPGIDRR 690

Query: 1318 VITHRLNVDPNKKPVQQKKRKAAPESQQFINEQVEQYLKISFVRPVLYPTWVANPVLVKK 1497
            +  H+L V    +PV+QK+R    +  + IN +VE+ LK  F+R   YP W++N VLVKK
Sbjct: 691  IACHKLAVKKGARPVRQKRRCFNHKRYETINAEVEKLLKAGFIREAKYPEWISNVVLVKK 750

Query: 1498 ASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDNE 1677
            A+GKWRMCVDFTDLNKACPKD FPL +IDQLVDST+G+ LL+FMDAFSGYNQI M+  +E
Sbjct: 751  ANGKWRMCVDFTDLNKACPKDSFPLQKIDQLVDSTAGHSLLSFMDAFSGYNQIPMNEQDE 810

Query: 1678 EKTAF 1692
            E T F
Sbjct: 811  ESTTF 815



 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 40/125 (32%), Positives = 59/125 (47%)
 Frame = +2

Query: 86  SPFVAEIRAEPLSPKFKLPSMDKYKGLSDPTNHLASFLDQMALHGYSDAITCRAFPLTLK 265
           SP   EI    +   F+ P + KY G SDP  H+  F D   + G + A  CR FPLTL+
Sbjct: 6   SPLSTEIMGTIIPRDFRFPDL-KYSGQSDPLVHIERFNDMTGVQGLTPAQRCRVFPLTLE 64

Query: 266 GIARVWFSQLRPNSIASWADLSRAFVTHFVGMCRQKKTASHLFNTTQKKDESIQDYVTRF 445
           G AR W+ +L    I  +  + +     F G    +     L    Q++ ES+ D+V R+
Sbjct: 65  GRAREWYRKLPRGGIKGYEQMCQELAEQFRGAVAPEDDMMELMGMKQEEHESLHDFVKRY 124

Query: 446 TTEML 460
              +L
Sbjct: 125 HRAVL 129



 Score = 59.3 bits (142), Expect = 5e-06
 Identities = 57/203 (28%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
 Frame = +1

Query: 724  PLKAPIEQIFMEIKKDDLLRPPRPIKEPQSGPGVNKFCHYHQAKGNLTRDCFMLRDEIER 903
            PLK  IE+++  I+   LL  P PI +P      ++FC +H   G+    C  LR ++E 
Sbjct: 311  PLKISIEELYERIEGRGLLYTPAPITKPAHRRDKSRFCKFHNTHGHTISQCRDLRIQVED 370

Query: 904  LIRRGYLHQYVAN-DPRPPAETTDQPDQHPPVVRE---IQMIASGFPVSKVNQANDSRSS 1071
            L+R  YL +YV    P   ++          + RE   IQ+IA      +   A DS  +
Sbjct: 371  LVRNQYLDEYVDGVSPVSQSQYAHDEGVERGLEREQPTIQVIA-----GRPTLAGDSNRA 425

Query: 1072 PMPSPHQCTQVVEASPSQPADERAQP-------AEELEKVYLHPDHPDKPLLVGHTLSGD 1230
                        E   + PA +RA+         E+ E+  L+P H D  ++     S +
Sbjct: 426  RKNYGRYALTSKEVLFNLPAAKRAKVRQVPIMWTEDEEEGILYP-HEDALVIKALVASTE 484

Query: 1231 LRGSLIECLRSNLDLFAWSYDDM 1299
            LR  L++   S   LF  + DDM
Sbjct: 485  LRRILVDTGSSVDILFKSALDDM 507


>ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617447 [Citrus sinensis]
          Length = 1100

 Score =  212 bits (540), Expect = 3e-52
 Identities = 99/185 (53%), Positives = 133/185 (71%)
 Frame = +1

Query: 1138 RAQPAEELEKVYLHPDHPDKPLLVGHTLSGDLRGSLIECLRSNLDLFAWSYDDMPGIDPA 1317
            R +P E+LE+V +   +P + + +G  L G +RG L++CL+S  D+FAWS++D PGI+  
Sbjct: 485  RQEPVEKLEEVAVSKSNPSRVVKIGSGLVGAVRGKLVKCLQSRADIFAWSHEDTPGINRG 544

Query: 1318 VITHRLNVDPNKKPVQQKKRKAAPESQQFINEQVEQYLKISFVRPVLYPTWVANPVLVKK 1497
            V  H+L +    +PV+QK+R    E  + IN +VE+ LK  F+R   YP W++N VLVKK
Sbjct: 545  VACHKLAIKKEARPVRQKRRCFNQERYEAINAEVEKLLKAGFIREAKYPEWISNVVLVKK 604

Query: 1498 ASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDNE 1677
            A+GKWRMCVDFTDLNKAC KD FPLP IDQLVDST+G+ LL+F+DAFSGYNQI M   +E
Sbjct: 605  ANGKWRMCVDFTDLNKACQKDSFPLPMIDQLVDSTAGHSLLSFIDAFSGYNQIPMDEQDE 664

Query: 1678 EKTAF 1692
            E T +
Sbjct: 665  ENTTY 669



 Score = 65.1 bits (157), Expect = 9e-08
 Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
 Frame = +1

Query: 643  NARRPESKDAP--PPKKQAHEHPKTE---------DTIPLKAPIEQIFMEIKKDDLLRPP 789
            N+R   S   P  P +K  H+    +            PLK P+E+++  I+   LL PP
Sbjct: 127  NSRTGRSGQLPSMPARKDIHDSQAVQLINYNLAYRQYTPLKVPMEELYERIEARGLLYPP 186

Query: 790  RPIKEPQSGPGVNKFCHYHQAKGNLTRDCFMLRDEIERLIRRGYLHQYVANDPRPPAETT 969
             PI +P      ++FC +H   G+    C  L+ ++E L+R  YL +YV +   P  E+ 
Sbjct: 187  APITKPAHRRDKSRFCKFHDTHGHTISQCRDLKIQVEDLVRNRYLDEYV-DGVSPVIESQ 245

Query: 970  DQPDQHPPVVREIQMIASGFPVSKVNQANDSRSSPMPSPHQCTQVVEASPSQPADERAQP 1149
               D+      E + +     V     A DS  +            E   + PA E+A+ 
Sbjct: 246  YTRDEGAERGLEREQLTIRVIVGGPTVAGDSNRARKNYGRYAMTSKEVLFNLPAAEKAKM 305

Query: 1150 -------AEELEKVYLHPDHPDKPLLVGHTLSGDLRGSLIECLRSNLDL-FAWSYDDM 1299
                    ++ E+  L+P H D  ++       +LR  LIE + S++D+ F  + DDM
Sbjct: 306  RQVPIMWTDDDEEGILYP-HEDALVIKAMVAGTELRRILIE-MGSSVDIVFKSTLDDM 361


>gb|ABA97642.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 818

 Score =  198 bits (504), Expect(2) = 1e-51
 Identities = 134/405 (33%), Positives = 211/405 (52%), Gaps = 23/405 (5%)
 Frame = +1

Query: 547  LARTEVFHKAEHINMARRESEKDEAVHKK----KKDNARRPESKDAPPPKKQAHEHPKTE 714
            LA   +        + +R +  D+A+ +K    K    ++P +  +   KK+  ++ K  
Sbjct: 129  LATRRITTSQRLFEIVQRCAHADDALRRKNDKPKTGGEKKPATNASESSKKKNRKNGKR- 187

Query: 715  DTIPLKAPIEQIFMEIKKDDLLRPPRPIKEPQSGPGVNKFCHYHQAKGNLTRDCFMLRDE 894
                 KA  E +  E        P RP  +PQS      +C  H+   +   DC + R  
Sbjct: 188  -----KAQAEVLAAEYANP----PKRP--DPQSSDTRKAWCPIHKTNRHSLEDCLVFRKS 236

Query: 895  IERLIRRGYLHQYVANDPRPPAETTDQPDQHPPVVREIQMIASGFPVSKVNQANDSRSSP 1074
            +E+         ++A +        ++ ++  P   +     S F VS + + + + SS 
Sbjct: 237  LEK---------HIAFEKGKRVRVVEKNEEAVPHESDSAFPDSDFHVSHIFRGSTTYSSK 287

Query: 1075 MPSP---HQ-CTQVVEASPSQPADERAQPAEELEKVYLHPDHPDKPLLVGH---TLSGDL 1233
                   H+ C+    A+P     E     +++E  +   DHP   +++G     +   +
Sbjct: 288  REYKKVEHEVCSTWQGAAPKMKWSE-----QKIE--FSEGDHPKTAVILGRYPIMVEPTI 340

Query: 1234 RGSLIECLRSNLDLFAWSYD------------DMPGIDPAVITHRLNVDPNKKPVQQKKR 1377
            R   I+C + +LD+   + +            DMPG+   VI ++L V P+ KPV+Q+ R
Sbjct: 341  RN--IKCNKRSLDIVEQTPNPPATTEPPKKPSDMPGVPREVIEYKLMVRPDAKPVKQRLR 398

Query: 1378 KAAPESQQFINEQVEQYLKISFVRPVLYPTWVANPVLVKKASGKWRMCVDFTDLNKACPK 1557
            + AP+ +Q I E++++ LK  F+R VLYP W++NP +V KA+GKWRMCVDFTDLNKACPK
Sbjct: 399  RFAPDRKQAIREELDKLLKAGFIREVLYPEWLSNPTMVWKANGKWRMCVDFTDLNKACPK 458

Query: 1558 DPFPLPRIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDNEEKTAF 1692
            D FPLPRIDQLVDST+G ELL+F+DA+SGY+QI M  ++EEKTAF
Sbjct: 459  DHFPLPRIDQLVDSTAGCELLSFLDAYSGYHQISMAKEDEEKTAF 503



 Score = 33.5 bits (75), Expect(2) = 1e-51
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +2

Query: 320 ADLSRAFVTHFVGMCRQKKTASHLFNTTQKKDESIQDYVTRF 445
           ADL + FV +F G  ++      L+  TQ   ES+++YV RF
Sbjct: 56  ADLWQQFVANFQGTYKRHAIEDDLYALTQNSGESLREYVRRF 97


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  208 bits (530), Expect = 5e-51
 Identities = 99/188 (52%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
 Frame = +1

Query: 1132 DERAQPAE-ELEKVYLHPDHPDKPLLVGHTLSGDLRGSLIECLRSNLDLFAWSYDDMPGI 1308
            DER  P +  + +V +    P + + +   L  +L+  L+  LR N   FAWS +DMPGI
Sbjct: 706  DERPNPQKGTVVQVNIDESDPSRCVGIRIDLPSELQNELVNFLRQNAATFAWSVEDMPGI 765

Query: 1309 DPAVITHRLNVDPNKKPVQQKKRKAAPESQQFINEQVEQYLKISFVRPVLYPTWVANPVL 1488
            D AV  H LNVDP  KP++QK+RK  P+  + +NE+V++ L    +  V YP W+ NPV+
Sbjct: 766  DSAVTCHELNVDPTYKPLKQKRRKLGPDRTKDVNEEVKKLLDAGSIVEVRYPDWLRNPVV 825

Query: 1489 VKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAFSGYNQIRMHP 1668
            VKK +GKWR+C+DFTDLNKACPKD FPLP ID+LV++T+GNELL+FMDAFSGYNQI MH 
Sbjct: 826  VKKKNGKWRVCIDFTDLNKACPKDSFPLPHIDRLVEATAGNELLSFMDAFSGYNQILMHQ 885

Query: 1669 DNEEKTAF 1692
            ++ EKT F
Sbjct: 886  NDREKTVF 893


>emb|CAE05745.1| OSJNBb0017I01.25 [Oryza sativa Japonica Group]
            gi|32488627|emb|CAE03420.1| OSJNBa0032F06.3 [Oryza sativa
            Japonica Group]
          Length = 1728

 Score =  208 bits (529), Expect = 7e-51
 Identities = 105/203 (51%), Positives = 142/203 (69%), Gaps = 2/203 (0%)
 Frame = +1

Query: 1090 QCTQVVEASPSQPADERAQPAEELEKVYLHP--DHPDKPLLVGHTLSGDLRGSLIECLRS 1263
            Q   +VE +PS PA    +P +++ K    P  D   K + +          +LI  LR 
Sbjct: 843  QSLDMVEQTPSPPAT--TEPPKKVTKTNKTPKLDSAIKIVPLSSANPDKTELALITFLRD 900

Query: 1264 NLDLFAWSYDDMPGIDPAVITHRLNVDPNKKPVQQKKRKAAPESQQFINEQVEQYLKISF 1443
            N D+FAW   DMPG+   VI H+L V P+ KPV+Q+ R+ AP+ +Q I E++++ LK  F
Sbjct: 901  NADVFAWQLSDMPGVPREVIEHKLMVRPDAKPVKQRLRRFAPDRKQAIREELDKLLKAGF 960

Query: 1444 VRPVLYPTWVANPVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLT 1623
            +R VL+P W+ANPV+++K++GKWRMCVDFTDLNKACPKD FPLPRIDQLVDST+G ELL+
Sbjct: 961  IREVLHPEWLANPVMLRKSNGKWRMCVDFTDLNKACPKDHFPLPRIDQLVDSTAGCELLS 1020

Query: 1624 FMDAFSGYNQIRMHPDNEEKTAF 1692
            F+DA+SGY+QI M  ++EEKTAF
Sbjct: 1021 FLDAYSGYHQISMAKEDEEKTAF 1043



 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 39/117 (33%), Positives = 58/117 (49%)
 Frame = +2

Query: 95  VAEIRAEPLSPKFKLPSMDKYKGLSDPTNHLASFLDQMALHGYSDAITCRAFPLTLKGIA 274
           + EI+A  L  +F+  +++KY G +DP   L  +   +   G  +       P  LKG A
Sbjct: 405 IPEIQAVILVIRFRPGAIEKYDGSTDPEEFLQVYSTVLYAAGADNNALANYLPTALKGSA 464

Query: 275 RVWFSQLRPNSIASWADLSRAFVTHFVGMCRQKKTASHLFNTTQKKDESIQDYVTRF 445
           R W   L P SI SWADL + F+ +F    ++      L   TQ   ES+++YV RF
Sbjct: 465 RSWLMHLPPYSIPSWADLWQQFIANFQVTYKRHAIEDDLHALTQNSGESLREYVRRF 521


>ref|XP_004292410.1| PREDICTED: uncharacterized protein LOC101297116 [Fragaria vesca
            subsp. vesca]
          Length = 727

 Score =  207 bits (527), Expect = 1e-50
 Identities = 102/208 (49%), Positives = 138/208 (66%), Gaps = 15/208 (7%)
 Frame = +1

Query: 1114 SPSQPADE---------------RAQPAEELEKVYLHPDHPDKPLLVGHTLSGDLRGSLI 1248
            SPS+P D+               R  PAEE E V    + P++ + +G+ L  +LR  LI
Sbjct: 5    SPSEPIDDPRDNPEGKEKKKQVSRPNPAEETEWVSQSTNAPERKVRIGNNLDPELRQKLI 64

Query: 1249 ECLRSNLDLFAWSYDDMPGIDPAVITHRLNVDPNKKPVQQKKRKAAPESQQFINEQVEQY 1428
              L+    +FAWSY DMP I P +ITH+LN+  +  PV+QK+R   PE  + I  +V++ 
Sbjct: 65   TFLQDKHAVFAWSYADMPSISPDIITHKLNILKDYPPVRQKRRAFNPEKYRAIQAEVQRL 124

Query: 1429 LKISFVRPVLYPTWVANPVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSG 1608
             +I F+R V YPTWV+N V+V K +GKWRMCVD+T+LNKACP D FPL RIDQLV+ST+G
Sbjct: 125  KEIKFIREVSYPTWVSNVVMVPKPNGKWRMCVDYTNLNKACPMDSFPLSRIDQLVNSTAG 184

Query: 1609 NELLTFMDAFSGYNQIRMHPDNEEKTAF 1692
             ++L F+DA+SGYNQI+MHP N+E T F
Sbjct: 185  YKMLNFLDAYSGYNQIKMHPTNQEHTTF 212


>gb|AAU44314.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 2027

 Score =  204 bits (519), Expect = 9e-50
 Identities = 107/229 (46%), Positives = 148/229 (64%)
 Frame = +1

Query: 1006 IQMIASGFPVSKVNQANDSRSSPMPSPHQCTQVVEASPSQPADERAQPAEELEKVYLHPD 1185
            +QM   G P   ++   D + +      +  ++  AS  +  DER  P+         P 
Sbjct: 722  LQMKMPG-PGGPISVRGDLKVALACMEQRADRLAAASKPEGGDERLGPSA--------PT 772

Query: 1186 HPDKPLLVGHTLSGDLRGSLIECLRSNLDLFAWSYDDMPGIDPAVITHRLNVDPNKKPVQ 1365
             P + +  G  +  D   +L+  LR+N D+FAW   DMPG+   VI HRL V P  +PV+
Sbjct: 773  APRQRMATGDEVPED---ALVSFLRANADVFAWRPADMPGVPREVIEHRLAVRPGARPVR 829

Query: 1366 QKKRKAAPESQQFINEQVEQYLKISFVRPVLYPTWVANPVLVKKASGKWRMCVDFTDLNK 1545
            QK R+ APE Q FI E+V + L+  F+R V++P W+ANPV+V KA+GK RMC+D+TDLNK
Sbjct: 830  QKVRRQAPERQAFIREEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLNK 889

Query: 1546 ACPKDPFPLPRIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDNEEKTAF 1692
            ACPKDP+PLPRIDQ+VDST+G +LL F+DA+SGY+QIRM  ++EEKTAF
Sbjct: 890  ACPKDPYPLPRIDQIVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAF 938



 Score = 72.0 bits (175), Expect(2) = 1e-11
 Identities = 39/118 (33%), Positives = 57/118 (48%)
 Frame = +2

Query: 92  FVAEIRAEPLSPKFKLPSMDKYKGLSDPTNHLASFLDQMALHGYSDAITCRAFPLTLKGI 271
           FVA +R     P+F+    +KY G  +PT  L  +   +   G  D +    FP+ LKG 
Sbjct: 224 FVASLRNVRWPPRFRPTITEKYDGSVNPTEFLQVYTTGIEAAGGDDRVMANFFPMALKGQ 283

Query: 272 ARVWFSQLRPNSIASWADLSRAFVTHFVGMCRQKKTASHLFNTTQKKDESIQDYVTRF 445
           AR W   L P S+ SW DL + F  +F G   +    + L    +  DES++ Y+ RF
Sbjct: 284 ARGWLMNLPPASVHSWEDLCQQFTMNFQGTYPRPGEEADLHAVQRGDDESLRSYIQRF 341



 Score = 25.8 bits (55), Expect(2) = 1e-11
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +1

Query: 457 AQFQAFLAGLRSGRLLTDLSRNEPKSMADLLARTEVFHKAEHINMARRESEKDEA 621
           A   AF  G+R  R+L  ++  EP++ A+L              +A R + K+EA
Sbjct: 355 AVIYAFRGGVRHNRMLEKIASKEPQTTAEL------------FQLADRVARKEEA 397


>emb|CAN60625.1| hypothetical protein VITISV_027087 [Vitis vinifera]
          Length = 2221

 Score =  203 bits (516), Expect = 2e-49
 Identities = 106/237 (44%), Positives = 146/237 (61%)
 Frame = +1

Query: 982  QHPPVVREIQMIASGFPVSKVNQANDSRSSPMPSPHQCTQVVEASPSQPADERAQPAEEL 1161
            ++ PV   I + A   P S++   +D  +         +    AS S P D+R  PA + 
Sbjct: 1038 EYLPVSHVIDLSAPSSPTSQIFDIDDEIAQHDSDDDSSS----ASDSDPVDQRVSPAGDT 1093

Query: 1162 EKVYLHPDHPDKPLLVGHTLSGDLRGSLIECLRSNLDLFAWSYDDMPGIDPAVITHRLNV 1341
            E V        + L +G  LS D+R SLI+ LRS LD+FAWSY++MPG+DP+++ HRL +
Sbjct: 1094 EIVDFGTSDQPRELRIGSDLSTDVRDSLIQLLRSYLDVFAWSYENMPGLDPSIVQHRLPL 1153

Query: 1342 DPNKKPVQQKKRKAAPESQQFINEQVEQYLKISFVRPVLYPTWVANPVLVKKASGKWRMC 1521
             P  +PV+QK R+  P     + E++++ L + F+  V YP W+AN V V K  GK R C
Sbjct: 1154 LPQTRPVKQKLRRLHPRWSLQVKEEIQKQLSVGFLSVVEYPEWLANVVPVPKKDGKVRAC 1213

Query: 1522 VDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDNEEKTAF 1692
            VDF DLNKA PKD FPLP ID LVDST+G+ +L+FMD FSGY+QI M P++ EKT F
Sbjct: 1214 VDFRDLNKANPKDDFPLPHIDMLVDSTAGHSMLSFMDGFSGYSQILMAPEDMEKTFF 1270


>gb|ABA95011.1| transposon protein, putative, unclassified [Oryza sativa Japonica
            Group]
          Length = 2028

 Score =  202 bits (515), Expect = 3e-49
 Identities = 108/229 (47%), Positives = 145/229 (63%)
 Frame = +1

Query: 1006 IQMIASGFPVSKVNQANDSRSSPMPSPHQCTQVVEASPSQPADERAQPAEELEKVYLHPD 1185
            +QM  SG P   ++   D + +      +  ++  AS  +  DER           L P 
Sbjct: 723  LQMKMSG-PGGPISVRGDLKVALACIEQRADRLAAASKPEGGDER-----------LGPS 770

Query: 1186 HPDKPLLVGHTLSGDLRGSLIECLRSNLDLFAWSYDDMPGIDPAVITHRLNVDPNKKPVQ 1365
             P  P     T       +L+  LR+N D+FAW   DMPG+   VI HRL V P  +PV+
Sbjct: 771  APTAPRQRMATCDEVPEDALVSFLRANADVFAWRPADMPGVPREVIEHRLAVRPGARPVR 830

Query: 1366 QKKRKAAPESQQFINEQVEQYLKISFVRPVLYPTWVANPVLVKKASGKWRMCVDFTDLNK 1545
            QK R+ APE Q FI E+V + L+  F+R V++P W+ANPV+V KA+GK RMC+D+TDLNK
Sbjct: 831  QKVRRQAPERQAFIREEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLNK 890

Query: 1546 ACPKDPFPLPRIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDNEEKTAF 1692
            ACPKDP+PLPRIDQ+VDST+G +LL F+DA+SGY+QIRM  ++EEKTAF
Sbjct: 891  ACPKDPYPLPRIDQIVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAF 939



 Score = 72.0 bits (175), Expect(2) = 1e-11
 Identities = 39/118 (33%), Positives = 57/118 (48%)
 Frame = +2

Query: 92  FVAEIRAEPLSPKFKLPSMDKYKGLSDPTNHLASFLDQMALHGYSDAITCRAFPLTLKGI 271
           FVA +R     P+F+    +KY G  +PT  L  +   +   G  D +    FP+ LKG 
Sbjct: 225 FVASLRNVRWPPRFRPTITEKYDGSVNPTEFLQVYTTGIEAAGGDDRVMANFFPMALKGQ 284

Query: 272 ARVWFSQLRPNSIASWADLSRAFVTHFVGMCRQKKTASHLFNTTQKKDESIQDYVTRF 445
           AR W   L P S+ SW DL + F  +F G   +    + L    +  DES++ Y+ RF
Sbjct: 285 ARGWLMNLPPASVHSWEDLCQQFTMNFQGTYPRPGEEADLHAVQRGDDESLRSYIQRF 342



 Score = 25.8 bits (55), Expect(2) = 1e-11
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +1

Query: 457 AQFQAFLAGLRSGRLLTDLSRNEPKSMADLLARTEVFHKAEHINMARRESEKDEA 621
           A   AF  G+R  R+L  ++  EP++ A+L              +A R + K+EA
Sbjct: 356 AVIYAFRGGVRHNRMLEKIASKEPQTTAEL------------FQLADRVARKEEA 398


>gb|AAK52121.1|AC079936_17 Putative retroelement [Oryza sativa Japonica Group]
          Length = 2079

 Score =  202 bits (515), Expect = 3e-49
 Identities = 106/208 (50%), Positives = 142/208 (68%), Gaps = 11/208 (5%)
 Frame = +1

Query: 1102 VVEASPSQPA-----------DERAQPAEELEKVYLHPDHPDKPLLVGHTLSGDLRGSLI 1248
            +VE +P+ PA           ++  +P   ++ V L   +PDK  L           +LI
Sbjct: 1013 MVEQTPTPPATSEPPKKVRKPNKTPKPNGAVKIVPLSSANPDKNEL-----------ALI 1061

Query: 1249 ECLRSNLDLFAWSYDDMPGIDPAVITHRLNVDPNKKPVQQKKRKAAPESQQFINEQVEQY 1428
              LR N D+FAW   DMPG+   VI H+L V P+ KPV+Q+ R+ AP+ +Q I E++++ 
Sbjct: 1062 AFLRDNADVFAWQPSDMPGVPREVIEHKLMVRPDAKPVKQRLRRFAPDRKQAIREELDKL 1121

Query: 1429 LKISFVRPVLYPTWVANPVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSG 1608
            LK  F+R VL+P W+ANPV+V+KA+GKWRMCVDFTDLNKACPKD FPLPRIDQLV ST+G
Sbjct: 1122 LKAGFIREVLHPEWLANPVIVRKANGKWRMCVDFTDLNKACPKDHFPLPRIDQLVYSTAG 1181

Query: 1609 NELLTFMDAFSGYNQIRMHPDNEEKTAF 1692
             ELL+F+DA+SGY+QI M  ++EEKTAF
Sbjct: 1182 CELLSFLDAYSGYHQISMVKEDEEKTAF 1209



 Score = 70.9 bits (172), Expect(2) = 3e-12
 Identities = 38/106 (35%), Positives = 53/106 (50%)
 Frame = +2

Query: 128 KFKLPSMDKYKGLSDPTNHLASFLDQMALHGYSDAITCRAFPLTLKGIARVWFSQLRPNS 307
           +F+  +++KY G  DP   L  +   +   G  D       P  LKG AR W   L P S
Sbjct: 577 RFRPGAIEKYDGSIDPEEFLQVYSTVLYAAGADDNAVANYLPTALKGSARSWLMHLPPYS 636

Query: 308 IASWADLSRAFVTHFVGMCRQKKTASHLFNTTQKKDESIQDYVTRF 445
           I+SWADL + FV +F G  ++      L   TQ   ES+++YV RF
Sbjct: 637 ISSWADLWQQFVANFQGTYKRHAIEDDLHALTQNSGESLREYVRRF 682



 Score = 29.3 bits (64), Expect(2) = 3e-12
 Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 6/173 (3%)
 Frame = +1

Query: 466  QAFLAGLRSGRLLTDLSRNEPKSMADLLARTEVFHKAEHINMA-RRESEKDEAVHKKKK- 639
            +AF +G+R      +L+     +   L    ++  +  H++ A RR+++K +   +KK  
Sbjct: 699  RAFKSGVRDRYTTQELATRHITTTRRLF---QIVERCAHVDDALRRKNDKPKTGGEKKSA 755

Query: 640  -DNARRPESKDAPPPKKQAHEHPKTEDTIPLKAPIEQIFMEIKKDDLLRPPRPIKEPQSG 816
             D +   + K+    K++A                     E+   +   PPR   +PQ  
Sbjct: 756  ADTSESSKKKNRKNGKRKAQA-------------------EVLAAEYANPPRR-PDPQGS 795

Query: 817  PGVNKFCHYHQAKGNLTRDCFMLRDEIER--LIRRGYLHQYV-ANDPRPPAET 966
                 +C  H+   +   DC + +  +E+     +G   + V  N+  PP E+
Sbjct: 796  DTKKSWCPIHKTDRHSLEDCLVFKKSLEKHMAFEKGKRVRVVEKNEESPPHES 848


>gb|ABA96833.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1987

 Score =  202 bits (514), Expect = 4e-49
 Identities = 106/205 (51%), Positives = 137/205 (66%), Gaps = 1/205 (0%)
 Frame = +1

Query: 1081 SPHQCTQVVEASPSQPADERAQPAE-ELEKVYLHPDHPDKPLLVGHTLSGDLRGSLIECL 1257
            S H   +V  A   Q AD  A  ++ E     L P  P  P     T       +L+  L
Sbjct: 734  SVHGDLKVALACMEQRADHLAAASKPEGGDERLGPSAPTAPRQRIDTCDDVPEDALVSFL 793

Query: 1258 RSNLDLFAWSYDDMPGIDPAVITHRLNVDPNKKPVQQKKRKAAPESQQFINEQVEQYLKI 1437
            R+N D+FAW   DMPG+   VI HRL V P  +PV+QK R+ APE Q FI E+V + L+ 
Sbjct: 794  RANADVFAWRPADMPGVPREVIEHRLAVRPGARPVRQKVRRQAPERQAFIREEVARLLEA 853

Query: 1438 SFVRPVLYPTWVANPVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNEL 1617
             F+R V++P W+ANPV+V KA+GK RMC+D+TDLNKACPKDP+PLPRIDQ+VDST+G +L
Sbjct: 854  GFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQIVDSTAGCDL 913

Query: 1618 LTFMDAFSGYNQIRMHPDNEEKTAF 1692
            L F+DA+SGY+QIRM  ++EEKTAF
Sbjct: 914  LCFLDAYSGYHQIRMAREDEEKTAF 938



 Score = 72.0 bits (175), Expect(2) = 1e-11
 Identities = 39/118 (33%), Positives = 57/118 (48%)
 Frame = +2

Query: 92  FVAEIRAEPLSPKFKLPSMDKYKGLSDPTNHLASFLDQMALHGYSDAITCRAFPLTLKGI 271
           FVA +R     P+F+    +KY G  +PT  L  +   +   G  D +    FP+ LKG 
Sbjct: 224 FVASLRNVRWPPRFRPTITEKYDGSVNPTEFLQVYTTGIEAAGGDDRVMANFFPMALKGQ 283

Query: 272 ARVWFSQLRPNSIASWADLSRAFVTHFVGMCRQKKTASHLFNTTQKKDESIQDYVTRF 445
           AR W   L P S+ SW DL + F  +F G   +    + L    +  DES++ Y+ RF
Sbjct: 284 ARGWLMNLPPASVHSWEDLCQQFTMNFQGTYPRPGEEADLHAVQRGDDESLRSYIQRF 341



 Score = 25.8 bits (55), Expect(2) = 1e-11
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +1

Query: 457 AQFQAFLAGLRSGRLLTDLSRNEPKSMADLLARTEVFHKAEHINMARRESEKDEA 621
           A   AF  G+R  R+L  ++  EP++ A+L              +A R + K+EA
Sbjct: 355 AVIYAFRGGVRHNRMLEKIASKEPQTTAEL------------FQLADRVARKEEA 397


>gb|ABF98665.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 793

 Score =  202 bits (514), Expect = 4e-49
 Identities = 96/160 (60%), Positives = 126/160 (78%), Gaps = 1/160 (0%)
 Frame = +1

Query: 1216 TLSGDLRGS-LIECLRSNLDLFAWSYDDMPGIDPAVITHRLNVDPNKKPVQQKKRKAAPE 1392
            T+ GD++ S L+  LR+N D+FAW   DMPG+   VI HRL V P+ +P++QK R+ APE
Sbjct: 609  TVFGDVKESALVSFLRANSDVFAWKPSDMPGVPREVIEHRLAVRPDARPIRQKVRRQAPE 668

Query: 1393 SQQFINEQVEQYLKISFVRPVLYPTWVANPVLVKKASGKWRMCVDFTDLNKACPKDPFPL 1572
             Q FI E+V   L+  F+R V++P W+ANPV+V KA+GK RMC+D TDLNKACPKDPFPL
Sbjct: 669  RQAFIREEVTWLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDCTDLNKACPKDPFPL 728

Query: 1573 PRIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDNEEKTAF 1692
            PRIDQ+VDST+G +LL+F+DA+SGY+QIRM  ++EEKTAF
Sbjct: 729  PRIDQIVDSTAGCDLLSFLDAYSGYHQIRMAREDEEKTAF 768


>gb|AAO17025.1| Putative gag-pol precursor [Oryza sativa Japonica Group]
            gi|108705838|gb|ABF93633.1| transposon protein, putative,
            unclassified [Oryza sativa Japonica Group]
          Length = 2027

 Score =  202 bits (513), Expect = 5e-49
 Identities = 102/197 (51%), Positives = 136/197 (69%)
 Frame = +1

Query: 1102 VVEASPSQPADERAQPAEELEKVYLHPDHPDKPLLVGHTLSGDLRGSLIECLRSNLDLFA 1281
            +V AS  +  DER   +         P  P + ++ G  +  D   +L+  LR+N D+FA
Sbjct: 753  LVAASKPEGGDERLGASA--------PATPRQRMITGDEVPED---ALVSFLRANADVFA 801

Query: 1282 WSYDDMPGIDPAVITHRLNVDPNKKPVQQKKRKAAPESQQFINEQVEQYLKISFVRPVLY 1461
            W   DMPG+   VI HRL V P  +PV+QK R+ APE Q FI E+V + L+  F+R V +
Sbjct: 802  WRPADMPGVPREVIEHRLAVRPGARPVRQKVRRQAPERQAFIREEVARLLEAGFIREVFH 861

Query: 1462 PTWVANPVLVKKASGKWRMCVDFTDLNKACPKDPFPLPRIDQLVDSTSGNELLTFMDAFS 1641
            P W+ANPV+V KA+GK RMC+D+TDLNKACPKDP+PLPRIDQ+VDST+G +LL F+DA+S
Sbjct: 862  PEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQIVDSTAGCDLLCFLDAYS 921

Query: 1642 GYNQIRMHPDNEEKTAF 1692
            GY+QIRM  ++EEKTAF
Sbjct: 922  GYHQIRMAREDEEKTAF 938



 Score = 71.6 bits (174), Expect(2) = 2e-11
 Identities = 38/118 (32%), Positives = 57/118 (48%)
 Frame = +2

Query: 92  FVAEIRAEPLSPKFKLPSMDKYKGLSDPTNHLASFLDQMALHGYSDAITCRAFPLTLKGI 271
           FVA +R     P+F+    +KY G  +P   L  +   +   G  D +    FP+ LKG 
Sbjct: 224 FVASLRNVRWPPRFRPTIAEKYDGSVNPAEFLQVYTTGIEAAGGDDRVMANFFPMALKGQ 283

Query: 272 ARVWFSQLRPNSIASWADLSRAFVTHFVGMCRQKKTASHLFNTTQKKDESIQDYVTRF 445
           AR W   L P S+ SW DL + F  +F G   +    + L    ++ DES++ Y+ RF
Sbjct: 284 ARGWLMNLPPASVHSWEDLCQQFTMNFQGTYPRPGEEADLHAVQRRDDESLRSYIQRF 341



 Score = 25.8 bits (55), Expect(2) = 2e-11
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +1

Query: 457 AQFQAFLAGLRSGRLLTDLSRNEPKSMADLLARTEVFHKAEHINMARRESEKDEA 621
           A   AF  G+R  R+L  ++  EP++ A+L              +A R + K+EA
Sbjct: 355 AVIYAFRGGVRHNRMLEKIASKEPQTTAEL------------FQLADRVARKEEA 397


>gb|AAX95884.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1920

 Score =  202 bits (513), Expect = 5e-49
 Identities = 96/171 (56%), Positives = 128/171 (74%)
 Frame = +1

Query: 1180 PDHPDKPLLVGHTLSGDLRGSLIECLRSNLDLFAWSYDDMPGIDPAVITHRLNVDPNKKP 1359
            P  P + ++ G  +  D   +L+  LR+N D+FAW   DMPG+   VI HRL V P  +P
Sbjct: 771  PATPRQRMITGDEVPED---ALVSFLRANADVFAWRPTDMPGVPREVIEHRLAVRPGARP 827

Query: 1360 VQQKKRKAAPESQQFINEQVEQYLKISFVRPVLYPTWVANPVLVKKASGKWRMCVDFTDL 1539
            V+QK R+ APE Q FI E+V + L+  F+R V++P W+ANPV+V KA+GK RMC+D+TDL
Sbjct: 828  VRQKVRRQAPERQAFIREEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDL 887

Query: 1540 NKACPKDPFPLPRIDQLVDSTSGNELLTFMDAFSGYNQIRMHPDNEEKTAF 1692
            NKACPKDP+PLPRIDQ+VDST+G +LL F+DA+SGY+QIRM  ++EEKTAF
Sbjct: 888  NKACPKDPYPLPRIDQIVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAF 938



 Score = 63.5 bits (153), Expect(2) = 4e-09
 Identities = 34/110 (30%), Positives = 52/110 (47%)
 Frame = +2

Query: 116 PLSPKFKLPSMDKYKGLSDPTNHLASFLDQMALHGYSDAITCRAFPLTLKGIARVWFSQL 295
           P  P+ +    +KY G  +PT  L  +   +   G  D +    F + LKG AR W   L
Sbjct: 232 PPCPRCRPTIAEKYDGSVNPTEFLQVYTTGIEAAGGDDRVMANFFRMALKGQARGWLMNL 291

Query: 296 RPNSIASWADLSRAFVTHFVGMCRQKKTASHLFNTTQKKDESIQDYVTRF 445
            P S+ SW DL + F  +F G   +    + L    ++ DES++ Y+ RF
Sbjct: 292 PPASVHSWEDLCQQFTMNFQGTYPRPGEEADLHAVQRRDDESLRSYIQRF 341



 Score = 25.8 bits (55), Expect(2) = 4e-09
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +1

Query: 457 AQFQAFLAGLRSGRLLTDLSRNEPKSMADLLARTEVFHKAEHINMARRESEKDEA 621
           A   AF  G+R  R+L  ++  EP++ A+L              +A R + K+EA
Sbjct: 355 AVIYAFRGGVRHNRMLEKIASKEPQTTAEL------------FQLADRVARKEEA 397