BLASTX nr result

ID: Stemona21_contig00015684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00015684
         (754 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]...    80   6e-13
ref|XP_002335728.1| predicted protein [Populus trichocarpa]            62   2e-07

>gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224352|prf||1102209F ORF 6
          Length = 79

 Score = 80.5 bits (197), Expect = 6e-13
 Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 3/76 (3%)
 Frame = +1

Query: 1   YLTINFTTSMISSRTKHESFDSFGSHAQLFVLWYSHIF--*CNEPTLPFLVVF-KDIESD 171
           Y +I F  S+I SRTKHESFDSFGSHAQL  +  SHIF   CNEP    L +F KDIE++
Sbjct: 5   YFSIPFQNSIIPSRTKHESFDSFGSHAQLLKV-NSHIFFYECNEPIFSSLFIFQKDIETN 63

Query: 172 TRPKY*EDSSDQTKNL 219
             PKY EDSSD+ KN+
Sbjct: 64  VIPKYSEDSSDKIKNM 79


>ref|XP_002335728.1| predicted protein [Populus trichocarpa]
          Length = 79

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 7/75 (9%)
 Frame = +1

Query: 1   YLTINFTTSMISSRTKHESFDSFGSHAQL--FVLWYSHI-F*CNEPTLPFLVVFK----D 159
           YL+I+  TSMI SRTKHESFDSFGSHAQL   ++  SH+ F  NEP L    + +     
Sbjct: 5   YLSIHCKTSMIPSRTKHESFDSFGSHAQLVQLLMGNSHLFFDWNEPILFSRFIIRIPKPK 64

Query: 160 IESDTRPKY*EDSSD 204
           + ++ RP+Y EDSSD
Sbjct: 65  LITNPRPEYSEDSSD 79


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