BLASTX nr result
ID: Stemona21_contig00015615
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00015615
(331 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004962772.1| PREDICTED: DNA-directed RNA polymerase II su... 115 6e-24
ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [S... 115 6e-24
ref|NP_001150634.1| LOC100284267 [Zea mays] gi|195640756|gb|ACG3... 115 6e-24
ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, ... 114 1e-23
gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypepti... 114 1e-23
gb|EMS63082.1| DNA-directed RNA polymerase II subunit RPB9 [Trit... 113 2e-23
ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II su... 113 2e-23
ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Sela... 112 5e-23
gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao] 112 7e-23
ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citr... 111 1e-22
ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su... 110 3e-22
gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus pe... 109 3e-22
ref|XP_006299525.1| hypothetical protein CARUB_v10015697mg [Caps... 108 1e-21
ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II su... 108 1e-21
ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su... 108 1e-21
ref|XP_002883036.1| hypothetical protein ARALYDRAFT_318462 [Arab... 108 1e-21
ref|NP_188323.1| DNA-directed RNA polymerases II, IV and V subun... 108 1e-21
ref|XP_004239877.1| PREDICTED: DNA-directed RNA polymerase II su... 107 2e-21
gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus... 107 2e-21
ref|XP_002962042.1| hypothetical protein SELMODRAFT_77443 [Selag... 106 3e-21
>ref|XP_004962772.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Setaria italica]
Length = 114
Score = 115 bits (288), Expect = 6e-24
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MSTMKFCRECNNILYPKED EQK+LL+ACRNCDHQEVADNNCVYRNVVHHSAG
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAG 53
>ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [Sorghum bicolor]
gi|241944049|gb|EES17194.1| hypothetical protein
SORBIDRAFT_08g018130 [Sorghum bicolor]
Length = 114
Score = 115 bits (288), Expect = 6e-24
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MSTMKFCRECNNILYPKED EQK+LL+ACRNCDHQEVADNNCVYRNVVHHSAG
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAG 53
>ref|NP_001150634.1| LOC100284267 [Zea mays] gi|195640756|gb|ACG39846.1| DNA-directed
RNA polymerase II 14.5 kDa polypeptide [Zea mays]
gi|414878124|tpg|DAA55255.1| TPA: DNA-directed RNA
polymerase subunit [Zea mays]
Length = 114
Score = 115 bits (288), Expect = 6e-24
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MSTMKFCRECNNILYPKED EQK+LL+ACRNCDHQEVADNNCVYRNVVHHSAG
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAG 53
>ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
9B-like [Oryza brachyantha]
Length = 114
Score = 114 bits (286), Expect = 1e-23
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADNNCVYRNVVHHSAG
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAG 53
>gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|125537020|gb|EAY83508.1| hypothetical protein
OsI_38722 [Oryza sativa Indica Group]
gi|125579719|gb|EAZ20865.1| hypothetical protein
OsJ_36504 [Oryza sativa Japonica Group]
Length = 114
Score = 114 bits (286), Expect = 1e-23
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADNNCVYRNVVHHSAG
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAG 53
>gb|EMS63082.1| DNA-directed RNA polymerase II subunit RPB9 [Triticum urartu]
gi|475491076|gb|EMT03535.1| DNA-directed RNA polymerase
II subunit RPB9 [Aegilops tauschii]
Length = 90
Score = 113 bits (283), Expect = 2e-23
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MS MKFCRECNNILYPKED +QK+LLFACRNCDHQEVADNNCVYRNVVHHSAG
Sbjct: 1 MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAG 53
>ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Brachypodium distachyon] gi|326497375|dbj|BAK02272.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 114
Score = 113 bits (283), Expect = 2e-23
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MS MKFCRECNNILYPKED +QK+LLFACRNCDHQEVADNNCVYRNVVHHSAG
Sbjct: 1 MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAG 53
>ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Selaginella moellendorffii]
gi|302811122|ref|XP_002987251.1| hypothetical protein
SELMODRAFT_125489 [Selaginella moellendorffii]
gi|300145148|gb|EFJ11827.1| hypothetical protein
SELMODRAFT_125489 [Selaginella moellendorffii]
gi|300156045|gb|EFJ22675.1| hypothetical protein
SELMODRAFT_232741 [Selaginella moellendorffii]
Length = 115
Score = 112 bits (280), Expect = 5e-23
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADNNCVYRN VHHSAG
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEVHHSAG 53
>gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao]
Length = 114
Score = 112 bits (279), Expect = 7e-23
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVA+NNCVYRN VHHSAG
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEVHHSAG 53
>ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citrus clementina]
gi|568871362|ref|XP_006488857.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 9A-like [Citrus
sinensis] gi|557521280|gb|ESR32647.1| hypothetical
protein CICLE_v10006256mg [Citrus clementina]
Length = 114
Score = 111 bits (277), Expect = 1e-22
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADNNCVYRN VHHS G
Sbjct: 1 MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEVHHSVG 53
>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
vinifera] gi|147769002|emb|CAN66735.1| hypothetical
protein VITISV_024186 [Vitis vinifera]
gi|296083263|emb|CBI22899.3| unnamed protein product
[Vitis vinifera]
Length = 114
Score = 110 bits (274), Expect = 3e-22
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVA+NNCVYRN +HHS G
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVG 53
>gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus persica]
Length = 114
Score = 109 bits (273), Expect = 3e-22
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADNNCVYRN +HH+ G
Sbjct: 1 MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEIHHAVG 53
>ref|XP_006299525.1| hypothetical protein CARUB_v10015697mg [Capsella rubella]
gi|482568234|gb|EOA32423.1| hypothetical protein
CARUB_v10015697mg [Capsella rubella]
Length = 114
Score = 108 bits (269), Expect = 1e-21
Identities = 47/51 (92%), Positives = 49/51 (96%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHS 324
MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVADN+CVYRN VHHS
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHS 51
>ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Fragaria vesca subsp. vesca]
Length = 114
Score = 108 bits (269), Expect = 1e-21
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MSTMKFCRECNNILYPKE+ E KILL+ACRNCDHQEVADNNCVYRN +HHS G
Sbjct: 1 MSTMKFCRECNNILYPKENKEDKILLYACRNCDHQEVADNNCVYRNEIHHSVG 53
>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Cucumis sativus] gi|449517969|ref|XP_004166016.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB9-like [Cucumis sativus]
Length = 114
Score = 108 bits (269), Expect = 1e-21
Identities = 45/53 (84%), Positives = 50/53 (94%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MSTMKFCRECNNILYPKED ++KILL+ACRNCDHQEVADNNCVYRN +HH+ G
Sbjct: 1 MSTMKFCRECNNILYPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVG 53
>ref|XP_002883036.1| hypothetical protein ARALYDRAFT_318462 [Arabidopsis lyrata subsp.
lyrata] gi|297328876|gb|EFH59295.1| hypothetical protein
ARALYDRAFT_318462 [Arabidopsis lyrata subsp. lyrata]
Length = 114
Score = 108 bits (269), Expect = 1e-21
Identities = 47/51 (92%), Positives = 49/51 (96%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHS 324
MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVADN+CVYRN VHHS
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHS 51
>ref|NP_188323.1| DNA-directed RNA polymerases II, IV and V subunit 9A [Arabidopsis
thaliana] gi|75126970|sp|Q6NLH0.1|RPB9A_ARATH RecName:
Full=DNA-directed RNA polymerases II, IV and V subunit
9A gi|45752612|gb|AAS76204.1| At3g16980 [Arabidopsis
thaliana] gi|46359779|gb|AAS88753.1| At3g16980
[Arabidopsis thaliana] gi|332642370|gb|AEE75891.1|
DNA-directed RNA polymerase NRPB9A/NRPD9A/NRPE9A
[Arabidopsis thaliana]
Length = 114
Score = 108 bits (269), Expect = 1e-21
Identities = 47/51 (92%), Positives = 49/51 (96%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHS 324
MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVADN+CVYRN VHHS
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHS 51
>ref|XP_004239877.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Solanum lycopersicum] gi|565378585|ref|XP_006355736.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 9A-like [Solanum tuberosum]
Length = 114
Score = 107 bits (267), Expect = 2e-21
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSA 327
MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQE A+NNCVYRN +HHSA
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEPAENNCVYRNEIHHSA 52
>gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus vulgaris]
Length = 114
Score = 107 bits (266), Expect = 2e-21
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADN CVYRN +HHS G
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNFCVYRNEIHHSVG 53
>ref|XP_002962042.1| hypothetical protein SELMODRAFT_77443 [Selaginella moellendorffii]
gi|302775260|ref|XP_002971047.1| hypothetical protein
SELMODRAFT_95006 [Selaginella moellendorffii]
gi|300161029|gb|EFJ27645.1| hypothetical protein
SELMODRAFT_95006 [Selaginella moellendorffii]
gi|300170701|gb|EFJ37302.1| hypothetical protein
SELMODRAFT_77443 [Selaginella moellendorffii]
Length = 114
Score = 106 bits (265), Expect = 3e-21
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = +1
Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSA 327
MSTMKFCRECNNILYPKED +QK+LL+ACRNCDHQE ADNNCVYRN VHH+A
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKLLLYACRNCDHQEAADNNCVYRNEVHHTA 52