BLASTX nr result

ID: Stemona21_contig00015615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00015615
         (331 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004962772.1| PREDICTED: DNA-directed RNA polymerase II su...   115   6e-24
ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [S...   115   6e-24
ref|NP_001150634.1| LOC100284267 [Zea mays] gi|195640756|gb|ACG3...   115   6e-24
ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, ...   114   1e-23
gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypepti...   114   1e-23
gb|EMS63082.1| DNA-directed RNA polymerase II subunit RPB9 [Trit...   113   2e-23
ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II su...   113   2e-23
ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Sela...   112   5e-23
gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao]      112   7e-23
ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citr...   111   1e-22
ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su...   110   3e-22
gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus pe...   109   3e-22
ref|XP_006299525.1| hypothetical protein CARUB_v10015697mg [Caps...   108   1e-21
ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II su...   108   1e-21
ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su...   108   1e-21
ref|XP_002883036.1| hypothetical protein ARALYDRAFT_318462 [Arab...   108   1e-21
ref|NP_188323.1| DNA-directed RNA polymerases II, IV and V subun...   108   1e-21
ref|XP_004239877.1| PREDICTED: DNA-directed RNA polymerase II su...   107   2e-21
gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus...   107   2e-21
ref|XP_002962042.1| hypothetical protein SELMODRAFT_77443 [Selag...   106   3e-21

>ref|XP_004962772.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Setaria italica]
          Length = 114

 Score =  115 bits (288), Expect = 6e-24
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MSTMKFCRECNNILYPKED EQK+LL+ACRNCDHQEVADNNCVYRNVVHHSAG
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAG 53


>ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [Sorghum bicolor]
           gi|241944049|gb|EES17194.1| hypothetical protein
           SORBIDRAFT_08g018130 [Sorghum bicolor]
          Length = 114

 Score =  115 bits (288), Expect = 6e-24
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MSTMKFCRECNNILYPKED EQK+LL+ACRNCDHQEVADNNCVYRNVVHHSAG
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAG 53


>ref|NP_001150634.1| LOC100284267 [Zea mays] gi|195640756|gb|ACG39846.1| DNA-directed
           RNA polymerase II 14.5 kDa polypeptide [Zea mays]
           gi|414878124|tpg|DAA55255.1| TPA: DNA-directed RNA
           polymerase subunit [Zea mays]
          Length = 114

 Score =  115 bits (288), Expect = 6e-24
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MSTMKFCRECNNILYPKED EQK+LL+ACRNCDHQEVADNNCVYRNVVHHSAG
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAG 53


>ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           9B-like [Oryza brachyantha]
          Length = 114

 Score =  114 bits (286), Expect = 1e-23
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADNNCVYRNVVHHSAG
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAG 53


>gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|125537020|gb|EAY83508.1| hypothetical protein
           OsI_38722 [Oryza sativa Indica Group]
           gi|125579719|gb|EAZ20865.1| hypothetical protein
           OsJ_36504 [Oryza sativa Japonica Group]
          Length = 114

 Score =  114 bits (286), Expect = 1e-23
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADNNCVYRNVVHHSAG
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAG 53


>gb|EMS63082.1| DNA-directed RNA polymerase II subunit RPB9 [Triticum urartu]
           gi|475491076|gb|EMT03535.1| DNA-directed RNA polymerase
           II subunit RPB9 [Aegilops tauschii]
          Length = 90

 Score =  113 bits (283), Expect = 2e-23
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MS MKFCRECNNILYPKED +QK+LLFACRNCDHQEVADNNCVYRNVVHHSAG
Sbjct: 1   MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAG 53


>ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Brachypodium distachyon] gi|326497375|dbj|BAK02272.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 114

 Score =  113 bits (283), Expect = 2e-23
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MS MKFCRECNNILYPKED +QK+LLFACRNCDHQEVADNNCVYRNVVHHSAG
Sbjct: 1   MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAG 53


>ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Selaginella moellendorffii]
           gi|302811122|ref|XP_002987251.1| hypothetical protein
           SELMODRAFT_125489 [Selaginella moellendorffii]
           gi|300145148|gb|EFJ11827.1| hypothetical protein
           SELMODRAFT_125489 [Selaginella moellendorffii]
           gi|300156045|gb|EFJ22675.1| hypothetical protein
           SELMODRAFT_232741 [Selaginella moellendorffii]
          Length = 115

 Score =  112 bits (280), Expect = 5e-23
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADNNCVYRN VHHSAG
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEVHHSAG 53


>gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao]
          Length = 114

 Score =  112 bits (279), Expect = 7e-23
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVA+NNCVYRN VHHSAG
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEVHHSAG 53


>ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citrus clementina]
           gi|568871362|ref|XP_006488857.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 9A-like [Citrus
           sinensis] gi|557521280|gb|ESR32647.1| hypothetical
           protein CICLE_v10006256mg [Citrus clementina]
          Length = 114

 Score =  111 bits (277), Expect = 1e-22
 Identities = 48/53 (90%), Positives = 50/53 (94%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADNNCVYRN VHHS G
Sbjct: 1   MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEVHHSVG 53


>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
           vinifera] gi|147769002|emb|CAN66735.1| hypothetical
           protein VITISV_024186 [Vitis vinifera]
           gi|296083263|emb|CBI22899.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  110 bits (274), Expect = 3e-22
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVA+NNCVYRN +HHS G
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVG 53


>gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus persica]
          Length = 114

 Score =  109 bits (273), Expect = 3e-22
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADNNCVYRN +HH+ G
Sbjct: 1   MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEIHHAVG 53


>ref|XP_006299525.1| hypothetical protein CARUB_v10015697mg [Capsella rubella]
           gi|482568234|gb|EOA32423.1| hypothetical protein
           CARUB_v10015697mg [Capsella rubella]
          Length = 114

 Score =  108 bits (269), Expect = 1e-21
 Identities = 47/51 (92%), Positives = 49/51 (96%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHS 324
           MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVADN+CVYRN VHHS
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHS 51


>ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Fragaria vesca subsp. vesca]
          Length = 114

 Score =  108 bits (269), Expect = 1e-21
 Identities = 46/53 (86%), Positives = 49/53 (92%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MSTMKFCRECNNILYPKE+ E KILL+ACRNCDHQEVADNNCVYRN +HHS G
Sbjct: 1   MSTMKFCRECNNILYPKENKEDKILLYACRNCDHQEVADNNCVYRNEIHHSVG 53


>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Cucumis sativus] gi|449517969|ref|XP_004166016.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB9-like [Cucumis sativus]
          Length = 114

 Score =  108 bits (269), Expect = 1e-21
 Identities = 45/53 (84%), Positives = 50/53 (94%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MSTMKFCRECNNILYPKED ++KILL+ACRNCDHQEVADNNCVYRN +HH+ G
Sbjct: 1   MSTMKFCRECNNILYPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVG 53


>ref|XP_002883036.1| hypothetical protein ARALYDRAFT_318462 [Arabidopsis lyrata subsp.
           lyrata] gi|297328876|gb|EFH59295.1| hypothetical protein
           ARALYDRAFT_318462 [Arabidopsis lyrata subsp. lyrata]
          Length = 114

 Score =  108 bits (269), Expect = 1e-21
 Identities = 47/51 (92%), Positives = 49/51 (96%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHS 324
           MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVADN+CVYRN VHHS
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHS 51


>ref|NP_188323.1| DNA-directed RNA polymerases II, IV and V subunit 9A [Arabidopsis
           thaliana] gi|75126970|sp|Q6NLH0.1|RPB9A_ARATH RecName:
           Full=DNA-directed RNA polymerases II, IV and V subunit
           9A gi|45752612|gb|AAS76204.1| At3g16980 [Arabidopsis
           thaliana] gi|46359779|gb|AAS88753.1| At3g16980
           [Arabidopsis thaliana] gi|332642370|gb|AEE75891.1|
           DNA-directed RNA polymerase NRPB9A/NRPD9A/NRPE9A
           [Arabidopsis thaliana]
          Length = 114

 Score =  108 bits (269), Expect = 1e-21
 Identities = 47/51 (92%), Positives = 49/51 (96%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHS 324
           MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVADN+CVYRN VHHS
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHS 51


>ref|XP_004239877.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Solanum lycopersicum] gi|565378585|ref|XP_006355736.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 9A-like [Solanum tuberosum]
          Length = 114

 Score =  107 bits (267), Expect = 2e-21
 Identities = 46/52 (88%), Positives = 49/52 (94%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSA 327
           MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQE A+NNCVYRN +HHSA
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEPAENNCVYRNEIHHSA 52


>gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus vulgaris]
          Length = 114

 Score =  107 bits (266), Expect = 2e-21
 Identities = 46/53 (86%), Positives = 49/53 (92%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSAG 330
           MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADN CVYRN +HHS G
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNFCVYRNEIHHSVG 53


>ref|XP_002962042.1| hypothetical protein SELMODRAFT_77443 [Selaginella moellendorffii]
           gi|302775260|ref|XP_002971047.1| hypothetical protein
           SELMODRAFT_95006 [Selaginella moellendorffii]
           gi|300161029|gb|EFJ27645.1| hypothetical protein
           SELMODRAFT_95006 [Selaginella moellendorffii]
           gi|300170701|gb|EFJ37302.1| hypothetical protein
           SELMODRAFT_77443 [Selaginella moellendorffii]
          Length = 114

 Score =  106 bits (265), Expect = 3e-21
 Identities = 45/52 (86%), Positives = 49/52 (94%)
 Frame = +1

Query: 172 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNNCVYRNVVHHSA 327
           MSTMKFCRECNNILYPKED +QK+LL+ACRNCDHQE ADNNCVYRN VHH+A
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKLLLYACRNCDHQEAADNNCVYRNEVHHTA 52


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