BLASTX nr result
ID: Stemona21_contig00015614
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00015614
(398 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004962772.1| PREDICTED: DNA-directed RNA polymerase II su... 112 5e-23
ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [S... 112 5e-23
ref|NP_001150634.1| LOC100284267 [Zea mays] gi|195640756|gb|ACG3... 112 5e-23
ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, ... 111 9e-23
gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypepti... 111 9e-23
gb|EMS63082.1| DNA-directed RNA polymerase II subunit RPB9 [Trit... 110 2e-22
ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II su... 110 2e-22
gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus... 109 4e-22
ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Sela... 109 4e-22
gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao] 108 6e-22
ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citr... 108 1e-21
ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin... 108 1e-21
ref|XP_006838753.1| hypothetical protein AMTR_s00002p00256010 [A... 107 1e-21
ref|XP_004487774.1| PREDICTED: DNA-directed RNA polymerase II su... 107 2e-21
ref|XP_006299525.1| hypothetical protein CARUB_v10015697mg [Caps... 107 2e-21
ref|XP_002883036.1| hypothetical protein ARALYDRAFT_318462 [Arab... 107 2e-21
ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su... 107 2e-21
ref|NP_188323.1| DNA-directed RNA polymerases II, IV and V subun... 107 2e-21
gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus pe... 106 3e-21
ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 ... 106 3e-21
>ref|XP_004962772.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Setaria italica]
Length = 114
Score = 112 bits (280), Expect = 5e-23
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MSTMKFCRECNNILYPKED EQK+LL+ACRNCDHQEVADN CVYRNVVHHSAG
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAG 53
>ref|XP_002443356.1| hypothetical protein SORBIDRAFT_08g018130 [Sorghum bicolor]
gi|241944049|gb|EES17194.1| hypothetical protein
SORBIDRAFT_08g018130 [Sorghum bicolor]
Length = 114
Score = 112 bits (280), Expect = 5e-23
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MSTMKFCRECNNILYPKED EQK+LL+ACRNCDHQEVADN CVYRNVVHHSAG
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAG 53
>ref|NP_001150634.1| LOC100284267 [Zea mays] gi|195640756|gb|ACG39846.1| DNA-directed
RNA polymerase II 14.5 kDa polypeptide [Zea mays]
gi|414878124|tpg|DAA55255.1| TPA: DNA-directed RNA
polymerase subunit [Zea mays]
Length = 114
Score = 112 bits (280), Expect = 5e-23
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MSTMKFCRECNNILYPKED EQK+LL+ACRNCDHQEVADN CVYRNVVHHSAG
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAG 53
>ref|XP_006664099.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
9B-like [Oryza brachyantha]
Length = 114
Score = 111 bits (278), Expect = 9e-23
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADN CVYRNVVHHSAG
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAG 53
>gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|125537020|gb|EAY83508.1| hypothetical protein
OsI_38722 [Oryza sativa Indica Group]
gi|125579719|gb|EAZ20865.1| hypothetical protein
OsJ_36504 [Oryza sativa Japonica Group]
Length = 114
Score = 111 bits (278), Expect = 9e-23
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADN CVYRNVVHHSAG
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAG 53
>gb|EMS63082.1| DNA-directed RNA polymerase II subunit RPB9 [Triticum urartu]
gi|475491076|gb|EMT03535.1| DNA-directed RNA polymerase
II subunit RPB9 [Aegilops tauschii]
Length = 90
Score = 110 bits (275), Expect = 2e-22
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MS MKFCRECNNILYPKED +QK+LLFACRNCDHQEVADN CVYRNVVHHSAG
Sbjct: 1 MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAG 53
>ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
[Brachypodium distachyon] gi|326497375|dbj|BAK02272.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 114
Score = 110 bits (275), Expect = 2e-22
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MS MKFCRECNNILYPKED +QK+LLFACRNCDHQEVADN CVYRNVVHHSAG
Sbjct: 1 MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAG 53
>gb|ESW10991.1| hypothetical protein PHAVU_009G256100g [Phaseolus vulgaris]
Length = 114
Score = 109 bits (272), Expect = 4e-22
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADN+CVYRN +HHS G
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNFCVYRNEIHHSVG 53
>ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Selaginella moellendorffii]
gi|302811122|ref|XP_002987251.1| hypothetical protein
SELMODRAFT_125489 [Selaginella moellendorffii]
gi|300145148|gb|EFJ11827.1| hypothetical protein
SELMODRAFT_125489 [Selaginella moellendorffii]
gi|300156045|gb|EFJ22675.1| hypothetical protein
SELMODRAFT_232741 [Selaginella moellendorffii]
Length = 115
Score = 109 bits (272), Expect = 4e-22
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADN CVYRN VHHSAG
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEVHHSAG 53
>gb|EOY06688.1| RNA polymerases M/15 Kd subunit [Theobroma cacao]
Length = 114
Score = 108 bits (271), Expect = 6e-22
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVA+N CVYRN VHHSAG
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEVHHSAG 53
>ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citrus clementina]
gi|568871362|ref|XP_006488857.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 9A-like [Citrus
sinensis] gi|557521280|gb|ESR32647.1| hypothetical
protein CICLE_v10006256mg [Citrus clementina]
Length = 114
Score = 108 bits (269), Expect = 1e-21
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADN CVYRN VHHS G
Sbjct: 1 MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEVHHSVG 53
>ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max]
gi|255627167|gb|ACU13928.1| unknown [Glycine max]
Length = 114
Score = 108 bits (269), Expect = 1e-21
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MS MKFCRECNNILYPKED +QK+LLFACRNCDHQEVADN+CVYRN +HHS G
Sbjct: 1 MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNFCVYRNEIHHSVG 53
>ref|XP_006838753.1| hypothetical protein AMTR_s00002p00256010 [Amborella trichopoda]
gi|548841259|gb|ERN01322.1| hypothetical protein
AMTR_s00002p00256010 [Amborella trichopoda]
Length = 105
Score = 107 bits (268), Expect = 1e-21
Identities = 46/53 (86%), Positives = 48/53 (90%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MSTMKFCRECNNILYPKED E K LL+ACRNCDHQEVADNYCVYRN +HHS G
Sbjct: 1 MSTMKFCRECNNILYPKEDQEHKQLLYACRNCDHQEVADNYCVYRNEIHHSVG 53
>ref|XP_004487774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Cicer
arietinum]
Length = 114
Score = 107 bits (266), Expect = 2e-21
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MSTMKFCRECNNILYPKED +Q+ LL+ACRNCDHQEVADNYCVYRN +HHS G
Sbjct: 1 MSTMKFCRECNNILYPKEDRDQRNLLYACRNCDHQEVADNYCVYRNEIHHSVG 53
>ref|XP_006299525.1| hypothetical protein CARUB_v10015697mg [Capsella rubella]
gi|482568234|gb|EOA32423.1| hypothetical protein
CARUB_v10015697mg [Capsella rubella]
Length = 114
Score = 107 bits (266), Expect = 2e-21
Identities = 47/51 (92%), Positives = 48/51 (94%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHS 391
MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVADN CVYRN VHHS
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHS 51
>ref|XP_002883036.1| hypothetical protein ARALYDRAFT_318462 [Arabidopsis lyrata subsp.
lyrata] gi|297328876|gb|EFH59295.1| hypothetical protein
ARALYDRAFT_318462 [Arabidopsis lyrata subsp. lyrata]
Length = 114
Score = 107 bits (266), Expect = 2e-21
Identities = 47/51 (92%), Positives = 48/51 (94%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHS 391
MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVADN CVYRN VHHS
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHS 51
>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
vinifera] gi|147769002|emb|CAN66735.1| hypothetical
protein VITISV_024186 [Vitis vinifera]
gi|296083263|emb|CBI22899.3| unnamed protein product
[Vitis vinifera]
Length = 114
Score = 107 bits (266), Expect = 2e-21
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVA+N CVYRN +HHS G
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVG 53
>ref|NP_188323.1| DNA-directed RNA polymerases II, IV and V subunit 9A [Arabidopsis
thaliana] gi|75126970|sp|Q6NLH0.1|RPB9A_ARATH RecName:
Full=DNA-directed RNA polymerases II, IV and V subunit
9A gi|45752612|gb|AAS76204.1| At3g16980 [Arabidopsis
thaliana] gi|46359779|gb|AAS88753.1| At3g16980
[Arabidopsis thaliana] gi|332642370|gb|AEE75891.1|
DNA-directed RNA polymerase NRPB9A/NRPD9A/NRPE9A
[Arabidopsis thaliana]
Length = 114
Score = 107 bits (266), Expect = 2e-21
Identities = 47/51 (92%), Positives = 48/51 (94%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHS 391
MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQEVADN CVYRN VHHS
Sbjct: 1 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHS 51
>gb|EMJ24706.1| hypothetical protein PRUPE_ppa013594mg [Prunus persica]
Length = 114
Score = 106 bits (265), Expect = 3e-21
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHSAG 397
MSTMKFCRECNNILYPKED +QKILL+ACRNCDHQEVADN CVYRN +HH+ G
Sbjct: 1 MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEIHHAVG 53
>ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 [Medicago truncatula]
gi|87240462|gb|ABD32320.1| DNA-directed RNA polymerase,
subunit C11/M/9 [Medicago truncatula]
gi|217075262|gb|ACJ85991.1| unknown [Medicago
truncatula] gi|355483825|gb|AES65028.1| DNA-directed RNA
polymerase II subunit RPB9 [Medicago truncatula]
gi|388497558|gb|AFK36845.1| unknown [Medicago
truncatula]
Length = 114
Score = 106 bits (265), Expect = 3e-21
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +2
Query: 239 MSTMKFCRECNNILYPKEDSEQKILLFACRNCDHQEVADNYCVYRNVVHHS 391
MSTMKFCRECNNILYPKED EQKILL+ACRNCDHQE ADN+CVYRN +HHS
Sbjct: 1 MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHS 51